data_3S25 # _entry.id 3S25 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3S25 RCSB RCSB065665 WWPDB D_1000065665 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 390003 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3S25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-16 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of a Hypothetical 7-bladed beta-propeller-like protein (EUBREC_1955, ERE_32420) from Eubacterium rectale at 1.88 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 # _cell.entry_id 3S25 _cell.length_a 118.649 _cell.length_b 118.649 _cell.length_c 53.892 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S25 _symmetry.Int_Tables_number 79 _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical 7-bladed beta-propeller-like protein' 34739.770 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 11 ? ? ? ? 3 water nat water 18.015 162 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GLNSSYVNGNTAGNLYNAGLFCESDGEVFFSNTNDNGRLYA(MSE)NIDGSNIHKLSNDTA(MSE)YINADKNYVYYVRN NNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYLFTC NTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYY(MSE)DVNRDNAIVHVNINNPNPVVLTEANIE HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKGEFCNINVTSQYVYFTDFVSNKEYCTSTQNPDTIKALQP ; _entity_poly.pdbx_seq_one_letter_code_can ;GLNSSYVNGNTAGNLYNAGLFCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDTAMYINADKNYVYYVRNNNQKITSQ TFFSYDRNSLCRIKRNGHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYLFTCNTSDRYFY YNNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANIEHYNVYGSLIFYQ RGGDNPALCVVKNDGTGFKELAKGEFCNINVTSQYVYFTDFVSNKEYCTSTQNPDTIKALQP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 390003 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 ASN n 1 4 SER n 1 5 SER n 1 6 TYR n 1 7 VAL n 1 8 ASN n 1 9 GLY n 1 10 ASN n 1 11 THR n 1 12 ALA n 1 13 GLY n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 ASN n 1 18 ALA n 1 19 GLY n 1 20 LEU n 1 21 PHE n 1 22 CYS n 1 23 GLU n 1 24 SER n 1 25 ASP n 1 26 GLY n 1 27 GLU n 1 28 VAL n 1 29 PHE n 1 30 PHE n 1 31 SER n 1 32 ASN n 1 33 THR n 1 34 ASN n 1 35 ASP n 1 36 ASN n 1 37 GLY n 1 38 ARG n 1 39 LEU n 1 40 TYR n 1 41 ALA n 1 42 MSE n 1 43 ASN n 1 44 ILE n 1 45 ASP n 1 46 GLY n 1 47 SER n 1 48 ASN n 1 49 ILE n 1 50 HIS n 1 51 LYS n 1 52 LEU n 1 53 SER n 1 54 ASN n 1 55 ASP n 1 56 THR n 1 57 ALA n 1 58 MSE n 1 59 TYR n 1 60 ILE n 1 61 ASN n 1 62 ALA n 1 63 ASP n 1 64 LYS n 1 65 ASN n 1 66 TYR n 1 67 VAL n 1 68 TYR n 1 69 TYR n 1 70 VAL n 1 71 ARG n 1 72 ASN n 1 73 ASN n 1 74 ASN n 1 75 GLN n 1 76 LYS n 1 77 ILE n 1 78 THR n 1 79 SER n 1 80 GLN n 1 81 THR n 1 82 PHE n 1 83 PHE n 1 84 SER n 1 85 TYR n 1 86 ASP n 1 87 ARG n 1 88 ASN n 1 89 SER n 1 90 LEU n 1 91 CYS n 1 92 ARG n 1 93 ILE n 1 94 LYS n 1 95 ARG n 1 96 ASN n 1 97 GLY n 1 98 HIS n 1 99 GLY n 1 100 SER n 1 101 THR n 1 102 VAL n 1 103 LEU n 1 104 ASP n 1 105 PRO n 1 106 ASP n 1 107 PRO n 1 108 CYS n 1 109 ILE n 1 110 TYR n 1 111 ALA n 1 112 SER n 1 113 LEU n 1 114 ILE n 1 115 GLY n 1 116 ASN n 1 117 TYR n 1 118 ILE n 1 119 TYR n 1 120 TYR n 1 121 LEU n 1 122 HIS n 1 123 TYR n 1 124 ASP n 1 125 THR n 1 126 GLN n 1 127 THR n 1 128 ALA n 1 129 THR n 1 130 SER n 1 131 LEU n 1 132 TYR n 1 133 ARG n 1 134 ILE n 1 135 ARG n 1 136 ILE n 1 137 ASP n 1 138 GLY n 1 139 GLU n 1 140 GLU n 1 141 LYS n 1 142 LYS n 1 143 LYS n 1 144 ILE n 1 145 LYS n 1 146 ASN n 1 147 HIS n 1 148 TYR n 1 149 LEU n 1 150 PHE n 1 151 THR n 1 152 CYS n 1 153 ASN n 1 154 THR n 1 155 SER n 1 156 ASP n 1 157 ARG n 1 158 TYR n 1 159 PHE n 1 160 TYR n 1 161 TYR n 1 162 ASN n 1 163 ASN n 1 164 PRO n 1 165 LYS n 1 166 ASN n 1 167 GLY n 1 168 GLN n 1 169 LEU n 1 170 TYR n 1 171 ARG n 1 172 TYR n 1 173 ASP n 1 174 THR n 1 175 ALA n 1 176 SER n 1 177 GLN n 1 178 SER n 1 179 GLU n 1 180 ALA n 1 181 LEU n 1 182 PHE n 1 183 TYR n 1 184 ASP n 1 185 CYS n 1 186 ASN n 1 187 CYS n 1 188 TYR n 1 189 LYS n 1 190 PRO n 1 191 VAL n 1 192 VAL n 1 193 LEU n 1 194 ASP n 1 195 ASP n 1 196 THR n 1 197 ASN n 1 198 VAL n 1 199 TYR n 1 200 TYR n 1 201 MSE n 1 202 ASP n 1 203 VAL n 1 204 ASN n 1 205 ARG n 1 206 ASP n 1 207 ASN n 1 208 ALA n 1 209 ILE n 1 210 VAL n 1 211 HIS n 1 212 VAL n 1 213 ASN n 1 214 ILE n 1 215 ASN n 1 216 ASN n 1 217 PRO n 1 218 ASN n 1 219 PRO n 1 220 VAL n 1 221 VAL n 1 222 LEU n 1 223 THR n 1 224 GLU n 1 225 ALA n 1 226 ASN n 1 227 ILE n 1 228 GLU n 1 229 HIS n 1 230 TYR n 1 231 ASN n 1 232 VAL n 1 233 TYR n 1 234 GLY n 1 235 SER n 1 236 LEU n 1 237 ILE n 1 238 PHE n 1 239 TYR n 1 240 GLN n 1 241 ARG n 1 242 GLY n 1 243 GLY n 1 244 ASP n 1 245 ASN n 1 246 PRO n 1 247 ALA n 1 248 LEU n 1 249 CYS n 1 250 VAL n 1 251 VAL n 1 252 LYS n 1 253 ASN n 1 254 ASP n 1 255 GLY n 1 256 THR n 1 257 GLY n 1 258 PHE n 1 259 LYS n 1 260 GLU n 1 261 LEU n 1 262 ALA n 1 263 LYS n 1 264 GLY n 1 265 GLU n 1 266 PHE n 1 267 CYS n 1 268 ASN n 1 269 ILE n 1 270 ASN n 1 271 VAL n 1 272 THR n 1 273 SER n 1 274 GLN n 1 275 TYR n 1 276 VAL n 1 277 TYR n 1 278 PHE n 1 279 THR n 1 280 ASP n 1 281 PHE n 1 282 VAL n 1 283 SER n 1 284 ASN n 1 285 LYS n 1 286 GLU n 1 287 TYR n 1 288 CYS n 1 289 THR n 1 290 SER n 1 291 THR n 1 292 GLN n 1 293 ASN n 1 294 PRO n 1 295 ASP n 1 296 THR n 1 297 ILE n 1 298 LYS n 1 299 ALA n 1 300 LEU n 1 301 GLN n 1 302 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ERE_32420, EUBREC_1955' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 33656' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Eubacterium rectale' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 515619 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 33656 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C4ZBG5_EUBR3 _struct_ref.pdbx_db_accession C4ZBG5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LNSSYVNGNTAGNLYNAGLFCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDTAMYINADKNYVYYVRNNNQKITSQT FFSYDRNSLCRIKRNGHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYLFTCNTSDRYFYY NNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANIEHYNVYGSLIFYQR GGDNPALCVVKNDGTGFKELAKGEFCNINVTSQYVYFTDFVSNKEYCTSTQNPDTIKALQP ; _struct_ref.pdbx_align_begin 30 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3S25 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 302 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C4ZBG5 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 330 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 30 _struct_ref_seq.pdbx_auth_seq_align_end 330 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3S25 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code C4ZBG5 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3S25 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.73 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.94 _exptl_crystal.description ;While data were scaled with XSCALE, the final statistics reported in the REMARK 200 section have been calculated with SCALA with fixed scales and no sd correction ; _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '20.0% polyethylene glycol 6000, 0.1M MES pH 6.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Vertical focusing mirror; double crystal Si(111) monochromator' _diffrn_detector.pdbx_collection_date 2011-03-31 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.96109 1.0 2 0.97929 1.0 3 0.97907 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL14-1 _diffrn_source.type 'SSRL BEAMLINE BL14-1' _diffrn_source.pdbx_wavelength_list 0.96109,0.97929,0.97907 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3S25 _reflns.d_resolution_high 1.88 _reflns.d_resolution_low 41.949 _reflns.number_all 30369 _reflns.number_obs 30369 _reflns.pdbx_netI_over_sigmaI 24.900 _reflns.pdbx_Rsym_value 0.028 _reflns.pdbx_redundancy 4.100 _reflns.percent_possible_obs 99.500 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.880 1.980 ? 17787 ? 0.406 1.9 0.406 ? 4.100 ? 4368 98.600 1 1 1.980 2.110 ? 17328 ? 0.223 3.5 0.223 ? 4.100 ? 4195 100.000 2 1 2.110 2.250 ? 16414 ? 0.127 6.1 0.127 ? 4.200 ? 3950 100.000 3 1 2.250 2.430 ? 15115 ? 0.084 9.3 0.084 ? 4.100 ? 3672 99.900 4 1 2.430 2.660 ? 13877 ? 0.055 14.1 0.055 ? 4.100 ? 3377 99.900 5 1 2.660 2.980 ? 12586 ? 0.034 22.0 0.034 ? 4.100 ? 3061 100.000 6 1 2.980 3.440 ? 11247 ? 0.022 30.0 0.022 ? 4.100 ? 2715 99.800 7 1 3.440 4.210 ? 9271 ? 0.018 35.1 0.018 ? 4.000 ? 2298 99.400 8 1 4.210 5.950 ? 7212 ? 0.015 46.0 0.015 ? 4.100 ? 1778 99.500 9 1 5.950 41.949 ? 3659 ? 0.018 36.6 0.018 ? 3.800 ? 955 95.200 10 1 # _refine.entry_id 3S25 _refine.ls_d_res_high 1.8800 _refine.ls_d_res_low 41.949 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.4400 _refine.ls_number_reflns_obs 30369 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3.ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4.WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5.1,2-ETHANEDIOL (EDO) FROM THE CRYOPROTECTANT SOLUTION HAS BEEN MODELED IN THE SOLVENT STRUCTURE. 6.THE RAMACHANDRAN OUTLIER AT RESIDUE 323 IS SUPPORTED BY ELECTRON DENSITY. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1595 _refine.ls_R_factor_R_work 0.1583 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1829 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1545 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 50.2502 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.2300 _refine.aniso_B[2][2] 0.2300 _refine.aniso_B[3][3] -0.4500 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9720 _refine.correlation_coeff_Fo_to_Fc_free 0.9650 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1070 _refine.overall_SU_ML 0.0770 _refine.overall_SU_B 5.3070 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 99.440 _refine.B_iso_min 31.240 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2374 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 44 _refine_hist.number_atoms_solvent 162 _refine_hist.number_atoms_total 2580 _refine_hist.d_res_high 1.8800 _refine_hist.d_res_low 41.949 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2584 0.015 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1704 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3515 1.473 1.935 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4140 0.886 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 325 6.264 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 146 35.220 24.795 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 397 12.611 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 13 20.825 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 373 0.099 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2967 0.006 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 554 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1530 1.897 3.000 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 621 0.511 3.000 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2492 3.062 5.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 1054 4.446 8.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 1010 6.272 11.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.8830 _refine_ls_shell.d_res_low 1.9320 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.2700 _refine_ls_shell.number_reflns_R_work 2064 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2200 _refine_ls_shell.R_factor_R_free 0.2560 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 106 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2170 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3S25 _struct.title 'Crystal structure of a 7-bladed beta-propeller-like protein (EUBREC_1955) from Eubacterium rectale ATCC 33656 at 1.88 A resolution' _struct.pdbx_descriptor 'Hypothetical 7-bladed beta-propeller-like protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;7-bladed beta-propeller, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'Structural Genomics, Unknown function' _struct_keywords.entry_id 3S25 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 3 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGEST THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 14 ? ALA A 18 ? ASN A 42 ALA A 46 5 ? 5 HELX_P HELX_P2 2 THR A 33 ? ASN A 36 ? THR A 61 ASN A 64 5 ? 4 HELX_P HELX_P3 3 ASN A 204 ? ASP A 206 ? ASN A 232 ASP A 234 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 41 C ? ? ? 1_555 A MSE 42 N ? ? A ALA 69 A MSE 70 1_555 ? ? ? ? ? ? ? 1.320 ? covale2 covale ? ? A MSE 42 C ? ? ? 1_555 A ASN 43 N ? ? A MSE 70 A ASN 71 1_555 ? ? ? ? ? ? ? 1.340 ? covale3 covale ? ? A ALA 57 C ? ? ? 1_555 A MSE 58 N ? ? A ALA 85 A MSE 86 1_555 ? ? ? ? ? ? ? 1.334 ? covale4 covale ? ? A MSE 58 C ? ? ? 1_555 A TYR 59 N ? ? A MSE 86 A TYR 87 1_555 ? ? ? ? ? ? ? 1.323 ? covale5 covale ? ? A TYR 200 C ? ? ? 1_555 A MSE 201 N ? ? A TYR 228 A MSE 229 1_555 ? ? ? ? ? ? ? 1.325 ? covale6 covale ? ? A MSE 201 C ? ? ? 1_555 A ASP 202 N ? ? A MSE 229 A ASP 230 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 301 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 329 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 302 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 330 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -11.36 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 21 ? SER A 24 ? PHE A 49 SER A 52 A 2 GLU A 27 ? SER A 31 ? GLU A 55 SER A 59 A 3 ARG A 38 ? ASN A 43 ? ARG A 66 ASN A 71 A 4 HIS A 50 ? ALA A 62 ? HIS A 78 ALA A 90 A 5 TYR A 66 ? ASN A 72 ? TYR A 94 ASN A 100 A 6 ASN A 88 ? LYS A 94 ? ASN A 116 LYS A 122 A 7 THR A 101 ? ASP A 104 ? THR A 129 ASP A 132 B 1 CYS A 108 ? ILE A 114 ? CYS A 136 ILE A 142 B 2 TYR A 117 ? TYR A 123 ? TYR A 145 TYR A 151 B 3 THR A 129 ? ARG A 135 ? THR A 157 ARG A 163 B 4 LYS A 142 ? LYS A 145 ? LYS A 170 LYS A 173 C 1 ASN A 153 ? SER A 155 ? ASN A 181 SER A 183 C 2 TYR A 158 ? ASN A 162 ? TYR A 186 ASN A 190 C 3 LEU A 169 ? ASP A 173 ? LEU A 197 ASP A 201 C 4 SER A 178 ? TYR A 183 ? SER A 206 TYR A 211 D 1 CYS A 187 ? ASP A 194 ? CYS A 215 ASP A 222 D 2 ASN A 197 ? ASP A 202 ? ASN A 225 ASP A 230 D 3 ILE A 209 ? VAL A 212 ? ILE A 237 VAL A 240 D 4 VAL A 220 ? VAL A 221 ? VAL A 248 VAL A 249 E 1 ILE A 227 ? TYR A 233 ? ILE A 255 TYR A 261 E 2 LEU A 236 ? ARG A 241 ? LEU A 264 ARG A 269 E 3 ALA A 247 ? LYS A 252 ? ALA A 275 LYS A 280 E 4 LYS A 259 ? LYS A 263 ? LYS A 287 LYS A 291 F 1 PHE A 266 ? VAL A 271 ? PHE A 294 VAL A 299 F 2 TYR A 275 ? ASP A 280 ? TYR A 303 ASP A 308 F 3 GLU A 286 ? SER A 290 ? GLU A 314 SER A 318 F 4 LYS A 298 ? ALA A 299 ? LYS A 326 ALA A 327 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS A 22 ? N CYS A 50 O PHE A 29 ? O PHE A 57 A 2 3 N PHE A 30 ? N PHE A 58 O TYR A 40 ? O TYR A 68 A 3 4 N ALA A 41 ? N ALA A 69 O HIS A 50 ? O HIS A 78 A 4 5 N MSE A 58 ? N MSE A 86 O VAL A 70 ? O VAL A 98 A 5 6 N TYR A 69 ? N TYR A 97 O CYS A 91 ? O CYS A 119 A 6 7 N LEU A 90 ? N LEU A 118 O ASP A 104 ? O ASP A 132 B 1 2 N ILE A 114 ? N ILE A 142 O TYR A 117 ? O TYR A 145 B 2 3 N ILE A 118 ? N ILE A 146 O ILE A 134 ? O ILE A 162 B 3 4 N LEU A 131 ? N LEU A 159 O ILE A 144 ? O ILE A 172 C 1 2 N SER A 155 ? N SER A 183 O TYR A 158 ? O TYR A 186 C 2 3 N PHE A 159 ? N PHE A 187 O TYR A 172 ? O TYR A 200 C 3 4 N ASP A 173 ? N ASP A 201 O SER A 178 ? O SER A 206 D 1 2 N ASP A 194 ? N ASP A 222 O ASN A 197 ? O ASN A 225 D 2 3 N VAL A 198 ? N VAL A 226 O VAL A 212 ? O VAL A 240 D 3 4 N HIS A 211 ? N HIS A 239 O VAL A 220 ? O VAL A 248 E 1 2 N HIS A 229 ? N HIS A 257 O GLN A 240 ? O GLN A 268 E 2 3 N ILE A 237 ? N ILE A 265 O VAL A 251 ? O VAL A 279 E 3 4 N LEU A 248 ? N LEU A 276 O ALA A 262 ? O ALA A 290 F 1 2 N ASN A 270 ? N ASN A 298 O TYR A 277 ? O TYR A 305 F 2 3 N PHE A 278 ? N PHE A 306 O TYR A 287 ? O TYR A 315 F 3 4 N CYS A 288 ? N CYS A 316 O LYS A 298 ? O LYS A 326 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 331' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 332' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE EDO A 333' AC4 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EDO A 334' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 335' AC6 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 337' AC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 338' AC8 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 339' AC9 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 340' BC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE EDO A 341' BC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 342' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 THR A 11 ? THR A 39 . ? 1_555 ? 2 AC1 4 ALA A 12 ? ALA A 40 . ? 1_555 ? 3 AC1 4 VAL A 232 ? VAL A 260 . ? 1_555 ? 4 AC1 4 GLY A 234 ? GLY A 262 . ? 1_555 ? 5 AC2 3 VAL A 7 ? VAL A 35 . ? 1_555 ? 6 AC2 3 SER A 24 ? SER A 52 . ? 1_555 ? 7 AC2 3 ASP A 25 ? ASP A 53 . ? 1_555 ? 8 AC3 2 PHE A 82 ? PHE A 110 . ? 1_555 ? 9 AC3 2 ASN A 284 ? ASN A 312 . ? 1_555 ? 10 AC4 7 GLY A 13 ? GLY A 41 . ? 1_555 ? 11 AC4 7 TYR A 16 ? TYR A 44 . ? 1_555 ? 12 AC4 7 ASN A 17 ? ASN A 45 . ? 1_555 ? 13 AC4 7 LYS A 189 ? LYS A 217 . ? 1_555 ? 14 AC4 7 HIS A 229 ? HIS A 257 . ? 1_555 ? 15 AC4 7 TYR A 230 ? TYR A 258 . ? 1_555 ? 16 AC4 7 HOH M . ? HOH A 419 . ? 1_555 ? 17 AC5 3 LEU A 121 ? LEU A 149 . ? 1_555 ? 18 AC5 3 EDO G . ? EDO A 337 . ? 1_555 ? 19 AC5 3 HOH M . ? HOH A 417 . ? 1_555 ? 20 AC6 5 TYR A 148 ? TYR A 176 . ? 1_555 ? 21 AC6 5 LEU A 149 ? LEU A 177 . ? 1_555 ? 22 AC6 5 PHE A 150 ? PHE A 178 . ? 1_555 ? 23 AC6 5 ASN A 162 ? ASN A 190 . ? 1_555 ? 24 AC6 5 EDO F . ? EDO A 335 . ? 1_555 ? 25 AC7 4 ASN A 116 ? ASN A 144 . ? 1_555 ? 26 AC7 4 TYR A 117 ? TYR A 145 . ? 1_555 ? 27 AC7 4 ARG A 135 ? ARG A 163 . ? 1_555 ? 28 AC7 4 EDO I . ? EDO A 339 . ? 1_555 ? 29 AC8 3 SER A 4 ? SER A 32 . ? 1_555 ? 30 AC8 3 EDO H . ? EDO A 338 . ? 1_555 ? 31 AC8 3 HOH M . ? HOH A 401 . ? 1_555 ? 32 AC9 3 TYR A 66 ? TYR A 94 . ? 1_555 ? 33 AC9 3 ARG A 92 ? ARG A 120 . ? 1_555 ? 34 AC9 3 ASP A 137 ? ASP A 165 . ? 1_555 ? 35 BC1 2 LYS A 145 ? LYS A 173 . ? 1_555 ? 36 BC1 2 ASN A 146 ? ASN A 174 . ? 1_555 ? 37 BC2 4 TYR A 132 ? TYR A 160 . ? 1_555 ? 38 BC2 4 LYS A 141 ? LYS A 169 . ? 1_555 ? 39 BC2 4 LYS A 142 ? LYS A 170 . ? 1_555 ? 40 BC2 4 LYS A 143 ? LYS A 171 . ? 1_555 ? # _atom_sites.entry_id 3S25 _atom_sites.fract_transf_matrix[1][1] 0.008428 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008428 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018556 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 LEU 2 30 30 LEU LEU A . n A 1 3 ASN 3 31 31 ASN ASN A . n A 1 4 SER 4 32 32 SER SER A . n A 1 5 SER 5 33 33 SER SER A . n A 1 6 TYR 6 34 34 TYR TYR A . n A 1 7 VAL 7 35 35 VAL VAL A . n A 1 8 ASN 8 36 36 ASN ASN A . n A 1 9 GLY 9 37 37 GLY GLY A . n A 1 10 ASN 10 38 38 ASN ASN A . n A 1 11 THR 11 39 39 THR THR A . n A 1 12 ALA 12 40 40 ALA ALA A . n A 1 13 GLY 13 41 41 GLY GLY A . n A 1 14 ASN 14 42 42 ASN ASN A . n A 1 15 LEU 15 43 43 LEU LEU A . n A 1 16 TYR 16 44 44 TYR TYR A . n A 1 17 ASN 17 45 45 ASN ASN A . n A 1 18 ALA 18 46 46 ALA ALA A . n A 1 19 GLY 19 47 47 GLY GLY A . n A 1 20 LEU 20 48 48 LEU LEU A . n A 1 21 PHE 21 49 49 PHE PHE A . n A 1 22 CYS 22 50 50 CYS CYS A . n A 1 23 GLU 23 51 51 GLU GLU A . n A 1 24 SER 24 52 52 SER SER A . n A 1 25 ASP 25 53 53 ASP ASP A . n A 1 26 GLY 26 54 54 GLY GLY A . n A 1 27 GLU 27 55 55 GLU GLU A . n A 1 28 VAL 28 56 56 VAL VAL A . n A 1 29 PHE 29 57 57 PHE PHE A . n A 1 30 PHE 30 58 58 PHE PHE A . n A 1 31 SER 31 59 59 SER SER A . n A 1 32 ASN 32 60 60 ASN ASN A . n A 1 33 THR 33 61 61 THR THR A . n A 1 34 ASN 34 62 62 ASN ASN A . n A 1 35 ASP 35 63 63 ASP ASP A . n A 1 36 ASN 36 64 64 ASN ASN A . n A 1 37 GLY 37 65 65 GLY GLY A . n A 1 38 ARG 38 66 66 ARG ARG A . n A 1 39 LEU 39 67 67 LEU LEU A . n A 1 40 TYR 40 68 68 TYR TYR A . n A 1 41 ALA 41 69 69 ALA ALA A . n A 1 42 MSE 42 70 70 MSE MSE A . n A 1 43 ASN 43 71 71 ASN ASN A . n A 1 44 ILE 44 72 72 ILE ILE A . n A 1 45 ASP 45 73 73 ASP ASP A . n A 1 46 GLY 46 74 74 GLY GLY A . n A 1 47 SER 47 75 75 SER SER A . n A 1 48 ASN 48 76 76 ASN ASN A . n A 1 49 ILE 49 77 77 ILE ILE A . n A 1 50 HIS 50 78 78 HIS HIS A . n A 1 51 LYS 51 79 79 LYS LYS A . n A 1 52 LEU 52 80 80 LEU LEU A . n A 1 53 SER 53 81 81 SER SER A . n A 1 54 ASN 54 82 82 ASN ASN A . n A 1 55 ASP 55 83 83 ASP ASP A . n A 1 56 THR 56 84 84 THR THR A . n A 1 57 ALA 57 85 85 ALA ALA A . n A 1 58 MSE 58 86 86 MSE MSE A . n A 1 59 TYR 59 87 87 TYR TYR A . n A 1 60 ILE 60 88 88 ILE ILE A . n A 1 61 ASN 61 89 89 ASN ASN A . n A 1 62 ALA 62 90 90 ALA ALA A . n A 1 63 ASP 63 91 91 ASP ASP A . n A 1 64 LYS 64 92 92 LYS LYS A . n A 1 65 ASN 65 93 93 ASN ASN A . n A 1 66 TYR 66 94 94 TYR TYR A . n A 1 67 VAL 67 95 95 VAL VAL A . n A 1 68 TYR 68 96 96 TYR TYR A . n A 1 69 TYR 69 97 97 TYR TYR A . n A 1 70 VAL 70 98 98 VAL VAL A . n A 1 71 ARG 71 99 99 ARG ARG A . n A 1 72 ASN 72 100 100 ASN ASN A . n A 1 73 ASN 73 101 101 ASN ASN A . n A 1 74 ASN 74 102 102 ASN ASN A . n A 1 75 GLN 75 103 ? ? ? A . n A 1 76 LYS 76 104 ? ? ? A . n A 1 77 ILE 77 105 ? ? ? A . n A 1 78 THR 78 106 ? ? ? A . n A 1 79 SER 79 107 ? ? ? A . n A 1 80 GLN 80 108 ? ? ? A . n A 1 81 THR 81 109 109 THR THR A . n A 1 82 PHE 82 110 110 PHE PHE A . n A 1 83 PHE 83 111 111 PHE PHE A . n A 1 84 SER 84 112 112 SER SER A . n A 1 85 TYR 85 113 113 TYR TYR A . n A 1 86 ASP 86 114 114 ASP ASP A . n A 1 87 ARG 87 115 115 ARG ARG A . n A 1 88 ASN 88 116 116 ASN ASN A . n A 1 89 SER 89 117 117 SER SER A . n A 1 90 LEU 90 118 118 LEU LEU A . n A 1 91 CYS 91 119 119 CYS CYS A . n A 1 92 ARG 92 120 120 ARG ARG A . n A 1 93 ILE 93 121 121 ILE ILE A . n A 1 94 LYS 94 122 122 LYS LYS A . n A 1 95 ARG 95 123 123 ARG ARG A . n A 1 96 ASN 96 124 124 ASN ASN A . n A 1 97 GLY 97 125 125 GLY GLY A . n A 1 98 HIS 98 126 126 HIS HIS A . n A 1 99 GLY 99 127 127 GLY GLY A . n A 1 100 SER 100 128 128 SER SER A . n A 1 101 THR 101 129 129 THR THR A . n A 1 102 VAL 102 130 130 VAL VAL A . n A 1 103 LEU 103 131 131 LEU LEU A . n A 1 104 ASP 104 132 132 ASP ASP A . n A 1 105 PRO 105 133 133 PRO PRO A . n A 1 106 ASP 106 134 134 ASP ASP A . n A 1 107 PRO 107 135 135 PRO PRO A . n A 1 108 CYS 108 136 136 CYS CYS A . n A 1 109 ILE 109 137 137 ILE ILE A . n A 1 110 TYR 110 138 138 TYR TYR A . n A 1 111 ALA 111 139 139 ALA ALA A . n A 1 112 SER 112 140 140 SER SER A . n A 1 113 LEU 113 141 141 LEU LEU A . n A 1 114 ILE 114 142 142 ILE ILE A . n A 1 115 GLY 115 143 143 GLY GLY A . n A 1 116 ASN 116 144 144 ASN ASN A . n A 1 117 TYR 117 145 145 TYR TYR A . n A 1 118 ILE 118 146 146 ILE ILE A . n A 1 119 TYR 119 147 147 TYR TYR A . n A 1 120 TYR 120 148 148 TYR TYR A . n A 1 121 LEU 121 149 149 LEU LEU A . n A 1 122 HIS 122 150 150 HIS HIS A . n A 1 123 TYR 123 151 151 TYR TYR A . n A 1 124 ASP 124 152 152 ASP ASP A . n A 1 125 THR 125 153 153 THR THR A . n A 1 126 GLN 126 154 154 GLN GLN A . n A 1 127 THR 127 155 155 THR THR A . n A 1 128 ALA 128 156 156 ALA ALA A . n A 1 129 THR 129 157 157 THR THR A . n A 1 130 SER 130 158 158 SER SER A . n A 1 131 LEU 131 159 159 LEU LEU A . n A 1 132 TYR 132 160 160 TYR TYR A . n A 1 133 ARG 133 161 161 ARG ARG A . n A 1 134 ILE 134 162 162 ILE ILE A . n A 1 135 ARG 135 163 163 ARG ARG A . n A 1 136 ILE 136 164 164 ILE ILE A . n A 1 137 ASP 137 165 165 ASP ASP A . n A 1 138 GLY 138 166 166 GLY GLY A . n A 1 139 GLU 139 167 167 GLU GLU A . n A 1 140 GLU 140 168 168 GLU GLU A . n A 1 141 LYS 141 169 169 LYS LYS A . n A 1 142 LYS 142 170 170 LYS LYS A . n A 1 143 LYS 143 171 171 LYS LYS A . n A 1 144 ILE 144 172 172 ILE ILE A . n A 1 145 LYS 145 173 173 LYS LYS A . n A 1 146 ASN 146 174 174 ASN ASN A . n A 1 147 HIS 147 175 175 HIS HIS A . n A 1 148 TYR 148 176 176 TYR TYR A . n A 1 149 LEU 149 177 177 LEU LEU A . n A 1 150 PHE 150 178 178 PHE PHE A . n A 1 151 THR 151 179 179 THR THR A . n A 1 152 CYS 152 180 180 CYS CYS A . n A 1 153 ASN 153 181 181 ASN ASN A . n A 1 154 THR 154 182 182 THR THR A . n A 1 155 SER 155 183 183 SER SER A . n A 1 156 ASP 156 184 184 ASP ASP A . n A 1 157 ARG 157 185 185 ARG ARG A . n A 1 158 TYR 158 186 186 TYR TYR A . n A 1 159 PHE 159 187 187 PHE PHE A . n A 1 160 TYR 160 188 188 TYR TYR A . n A 1 161 TYR 161 189 189 TYR TYR A . n A 1 162 ASN 162 190 190 ASN ASN A . n A 1 163 ASN 163 191 191 ASN ASN A . n A 1 164 PRO 164 192 192 PRO PRO A . n A 1 165 LYS 165 193 193 LYS LYS A . n A 1 166 ASN 166 194 194 ASN ASN A . n A 1 167 GLY 167 195 195 GLY GLY A . n A 1 168 GLN 168 196 196 GLN GLN A . n A 1 169 LEU 169 197 197 LEU LEU A . n A 1 170 TYR 170 198 198 TYR TYR A . n A 1 171 ARG 171 199 199 ARG ARG A . n A 1 172 TYR 172 200 200 TYR TYR A . n A 1 173 ASP 173 201 201 ASP ASP A . n A 1 174 THR 174 202 202 THR THR A . n A 1 175 ALA 175 203 203 ALA ALA A . n A 1 176 SER 176 204 204 SER SER A . n A 1 177 GLN 177 205 205 GLN GLN A . n A 1 178 SER 178 206 206 SER SER A . n A 1 179 GLU 179 207 207 GLU GLU A . n A 1 180 ALA 180 208 208 ALA ALA A . n A 1 181 LEU 181 209 209 LEU LEU A . n A 1 182 PHE 182 210 210 PHE PHE A . n A 1 183 TYR 183 211 211 TYR TYR A . n A 1 184 ASP 184 212 212 ASP ASP A . n A 1 185 CYS 185 213 213 CYS CYS A . n A 1 186 ASN 186 214 214 ASN ASN A . n A 1 187 CYS 187 215 215 CYS CYS A . n A 1 188 TYR 188 216 216 TYR TYR A . n A 1 189 LYS 189 217 217 LYS LYS A . n A 1 190 PRO 190 218 218 PRO PRO A . n A 1 191 VAL 191 219 219 VAL VAL A . n A 1 192 VAL 192 220 220 VAL VAL A . n A 1 193 LEU 193 221 221 LEU LEU A . n A 1 194 ASP 194 222 222 ASP ASP A . n A 1 195 ASP 195 223 223 ASP ASP A . n A 1 196 THR 196 224 224 THR THR A . n A 1 197 ASN 197 225 225 ASN ASN A . n A 1 198 VAL 198 226 226 VAL VAL A . n A 1 199 TYR 199 227 227 TYR TYR A . n A 1 200 TYR 200 228 228 TYR TYR A . n A 1 201 MSE 201 229 229 MSE MSE A . n A 1 202 ASP 202 230 230 ASP ASP A . n A 1 203 VAL 203 231 231 VAL VAL A . n A 1 204 ASN 204 232 232 ASN ASN A . n A 1 205 ARG 205 233 233 ARG ARG A . n A 1 206 ASP 206 234 234 ASP ASP A . n A 1 207 ASN 207 235 235 ASN ASN A . n A 1 208 ALA 208 236 236 ALA ALA A . n A 1 209 ILE 209 237 237 ILE ILE A . n A 1 210 VAL 210 238 238 VAL VAL A . n A 1 211 HIS 211 239 239 HIS HIS A . n A 1 212 VAL 212 240 240 VAL VAL A . n A 1 213 ASN 213 241 241 ASN ASN A . n A 1 214 ILE 214 242 242 ILE ILE A . n A 1 215 ASN 215 243 243 ASN ASN A . n A 1 216 ASN 216 244 244 ASN ASN A . n A 1 217 PRO 217 245 245 PRO PRO A . n A 1 218 ASN 218 246 246 ASN ASN A . n A 1 219 PRO 219 247 247 PRO PRO A . n A 1 220 VAL 220 248 248 VAL VAL A . n A 1 221 VAL 221 249 249 VAL VAL A . n A 1 222 LEU 222 250 250 LEU LEU A . n A 1 223 THR 223 251 251 THR THR A . n A 1 224 GLU 224 252 252 GLU GLU A . n A 1 225 ALA 225 253 253 ALA ALA A . n A 1 226 ASN 226 254 254 ASN ASN A . n A 1 227 ILE 227 255 255 ILE ILE A . n A 1 228 GLU 228 256 256 GLU GLU A . n A 1 229 HIS 229 257 257 HIS HIS A . n A 1 230 TYR 230 258 258 TYR TYR A . n A 1 231 ASN 231 259 259 ASN ASN A . n A 1 232 VAL 232 260 260 VAL VAL A . n A 1 233 TYR 233 261 261 TYR TYR A . n A 1 234 GLY 234 262 262 GLY GLY A . n A 1 235 SER 235 263 263 SER SER A . n A 1 236 LEU 236 264 264 LEU LEU A . n A 1 237 ILE 237 265 265 ILE ILE A . n A 1 238 PHE 238 266 266 PHE PHE A . n A 1 239 TYR 239 267 267 TYR TYR A . n A 1 240 GLN 240 268 268 GLN GLN A . n A 1 241 ARG 241 269 269 ARG ARG A . n A 1 242 GLY 242 270 270 GLY GLY A . n A 1 243 GLY 243 271 271 GLY GLY A . n A 1 244 ASP 244 272 272 ASP ASP A . n A 1 245 ASN 245 273 273 ASN ASN A . n A 1 246 PRO 246 274 274 PRO PRO A . n A 1 247 ALA 247 275 275 ALA ALA A . n A 1 248 LEU 248 276 276 LEU LEU A . n A 1 249 CYS 249 277 277 CYS CYS A . n A 1 250 VAL 250 278 278 VAL VAL A . n A 1 251 VAL 251 279 279 VAL VAL A . n A 1 252 LYS 252 280 280 LYS LYS A . n A 1 253 ASN 253 281 281 ASN ASN A . n A 1 254 ASP 254 282 282 ASP ASP A . n A 1 255 GLY 255 283 283 GLY GLY A . n A 1 256 THR 256 284 284 THR THR A . n A 1 257 GLY 257 285 285 GLY GLY A . n A 1 258 PHE 258 286 286 PHE PHE A . n A 1 259 LYS 259 287 287 LYS LYS A . n A 1 260 GLU 260 288 288 GLU GLU A . n A 1 261 LEU 261 289 289 LEU LEU A . n A 1 262 ALA 262 290 290 ALA ALA A . n A 1 263 LYS 263 291 291 LYS LYS A . n A 1 264 GLY 264 292 292 GLY GLY A . n A 1 265 GLU 265 293 293 GLU GLU A . n A 1 266 PHE 266 294 294 PHE PHE A . n A 1 267 CYS 267 295 295 CYS CYS A . n A 1 268 ASN 268 296 296 ASN ASN A . n A 1 269 ILE 269 297 297 ILE ILE A . n A 1 270 ASN 270 298 298 ASN ASN A . n A 1 271 VAL 271 299 299 VAL VAL A . n A 1 272 THR 272 300 300 THR THR A . n A 1 273 SER 273 301 301 SER SER A . n A 1 274 GLN 274 302 302 GLN GLN A . n A 1 275 TYR 275 303 303 TYR TYR A . n A 1 276 VAL 276 304 304 VAL VAL A . n A 1 277 TYR 277 305 305 TYR TYR A . n A 1 278 PHE 278 306 306 PHE PHE A . n A 1 279 THR 279 307 307 THR THR A . n A 1 280 ASP 280 308 308 ASP ASP A . n A 1 281 PHE 281 309 309 PHE PHE A . n A 1 282 VAL 282 310 310 VAL VAL A . n A 1 283 SER 283 311 311 SER SER A . n A 1 284 ASN 284 312 312 ASN ASN A . n A 1 285 LYS 285 313 313 LYS LYS A . n A 1 286 GLU 286 314 314 GLU GLU A . n A 1 287 TYR 287 315 315 TYR TYR A . n A 1 288 CYS 288 316 316 CYS CYS A . n A 1 289 THR 289 317 317 THR THR A . n A 1 290 SER 290 318 318 SER SER A . n A 1 291 THR 291 319 319 THR THR A . n A 1 292 GLN 292 320 320 GLN GLN A . n A 1 293 ASN 293 321 321 ASN ASN A . n A 1 294 PRO 294 322 322 PRO PRO A . n A 1 295 ASP 295 323 323 ASP ASP A . n A 1 296 THR 296 324 324 THR THR A . n A 1 297 ILE 297 325 325 ILE ILE A . n A 1 298 LYS 298 326 326 LYS LYS A . n A 1 299 ALA 299 327 327 ALA ALA A . n A 1 300 LEU 300 328 328 LEU LEU A . n A 1 301 GLN 301 329 329 GLN GLN A . n A 1 302 PRO 302 330 330 PRO PRO A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 331 331 EDO EDO A . C 2 EDO 1 332 332 EDO EDO A . D 2 EDO 1 333 333 EDO EDO A . E 2 EDO 1 334 334 EDO EDO A . F 2 EDO 1 335 335 EDO EDO A . G 2 EDO 1 337 337 EDO EDO A . H 2 EDO 1 338 338 EDO EDO A . I 2 EDO 1 339 339 EDO EDO A . J 2 EDO 1 340 340 EDO EDO A . K 2 EDO 1 341 341 EDO EDO A . L 2 EDO 1 342 342 EDO EDO A . M 3 HOH 1 343 343 HOH HOH A . M 3 HOH 2 344 344 HOH HOH A . M 3 HOH 3 345 345 HOH HOH A . M 3 HOH 4 346 346 HOH HOH A . M 3 HOH 5 347 347 HOH HOH A . M 3 HOH 6 348 348 HOH HOH A . M 3 HOH 7 349 349 HOH HOH A . M 3 HOH 8 350 350 HOH HOH A . M 3 HOH 9 351 351 HOH HOH A . M 3 HOH 10 352 352 HOH HOH A . M 3 HOH 11 353 353 HOH HOH A . M 3 HOH 12 354 354 HOH HOH A . M 3 HOH 13 355 355 HOH HOH A . M 3 HOH 14 356 356 HOH HOH A . M 3 HOH 15 357 357 HOH HOH A . M 3 HOH 16 358 358 HOH HOH A . M 3 HOH 17 359 359 HOH HOH A . M 3 HOH 18 360 360 HOH HOH A . M 3 HOH 19 361 361 HOH HOH A . M 3 HOH 20 362 362 HOH HOH A . M 3 HOH 21 363 363 HOH HOH A . M 3 HOH 22 364 364 HOH HOH A . M 3 HOH 23 365 365 HOH HOH A . M 3 HOH 24 366 366 HOH HOH A . M 3 HOH 25 367 367 HOH HOH A . M 3 HOH 26 368 368 HOH HOH A . M 3 HOH 27 369 369 HOH HOH A . M 3 HOH 28 370 370 HOH HOH A . M 3 HOH 29 371 371 HOH HOH A . M 3 HOH 30 372 372 HOH HOH A . M 3 HOH 31 373 373 HOH HOH A . M 3 HOH 32 374 374 HOH HOH A . M 3 HOH 33 375 375 HOH HOH A . M 3 HOH 34 376 376 HOH HOH A . M 3 HOH 35 377 377 HOH HOH A . M 3 HOH 36 378 378 HOH HOH A . M 3 HOH 37 379 379 HOH HOH A . M 3 HOH 38 380 380 HOH HOH A . M 3 HOH 39 381 381 HOH HOH A . M 3 HOH 40 382 382 HOH HOH A . M 3 HOH 41 383 383 HOH HOH A . M 3 HOH 42 384 384 HOH HOH A . M 3 HOH 43 385 385 HOH HOH A . M 3 HOH 44 386 386 HOH HOH A . M 3 HOH 45 387 387 HOH HOH A . M 3 HOH 46 388 388 HOH HOH A . M 3 HOH 47 389 389 HOH HOH A . M 3 HOH 48 390 390 HOH HOH A . M 3 HOH 49 391 391 HOH HOH A . M 3 HOH 50 392 392 HOH HOH A . M 3 HOH 51 393 393 HOH HOH A . M 3 HOH 52 394 394 HOH HOH A . M 3 HOH 53 395 395 HOH HOH A . M 3 HOH 54 396 396 HOH HOH A . M 3 HOH 55 397 397 HOH HOH A . M 3 HOH 56 398 398 HOH HOH A . M 3 HOH 57 399 399 HOH HOH A . M 3 HOH 58 400 400 HOH HOH A . M 3 HOH 59 401 401 HOH HOH A . M 3 HOH 60 402 402 HOH HOH A . M 3 HOH 61 403 403 HOH HOH A . M 3 HOH 62 404 404 HOH HOH A . M 3 HOH 63 405 405 HOH HOH A . M 3 HOH 64 406 406 HOH HOH A . M 3 HOH 65 407 407 HOH HOH A . M 3 HOH 66 408 408 HOH HOH A . M 3 HOH 67 409 409 HOH HOH A . M 3 HOH 68 410 410 HOH HOH A . M 3 HOH 69 411 411 HOH HOH A . M 3 HOH 70 412 412 HOH HOH A . M 3 HOH 71 413 413 HOH HOH A . M 3 HOH 72 414 414 HOH HOH A . M 3 HOH 73 415 415 HOH HOH A . M 3 HOH 74 416 416 HOH HOH A . M 3 HOH 75 417 417 HOH HOH A . M 3 HOH 76 418 418 HOH HOH A . M 3 HOH 77 419 419 HOH HOH A . M 3 HOH 78 420 420 HOH HOH A . M 3 HOH 79 421 421 HOH HOH A . M 3 HOH 80 422 422 HOH HOH A . M 3 HOH 81 423 423 HOH HOH A . M 3 HOH 82 424 424 HOH HOH A . M 3 HOH 83 425 425 HOH HOH A . M 3 HOH 84 426 426 HOH HOH A . M 3 HOH 85 427 427 HOH HOH A . M 3 HOH 86 428 428 HOH HOH A . M 3 HOH 87 429 429 HOH HOH A . M 3 HOH 88 430 430 HOH HOH A . M 3 HOH 89 431 431 HOH HOH A . M 3 HOH 90 432 432 HOH HOH A . M 3 HOH 91 433 433 HOH HOH A . M 3 HOH 92 434 434 HOH HOH A . M 3 HOH 93 435 435 HOH HOH A . M 3 HOH 94 436 436 HOH HOH A . M 3 HOH 95 437 437 HOH HOH A . M 3 HOH 96 438 438 HOH HOH A . M 3 HOH 97 439 439 HOH HOH A . M 3 HOH 98 440 440 HOH HOH A . M 3 HOH 99 441 441 HOH HOH A . M 3 HOH 100 442 442 HOH HOH A . M 3 HOH 101 443 443 HOH HOH A . M 3 HOH 102 444 444 HOH HOH A . M 3 HOH 103 445 445 HOH HOH A . M 3 HOH 104 446 446 HOH HOH A . M 3 HOH 105 447 447 HOH HOH A . M 3 HOH 106 448 448 HOH HOH A . M 3 HOH 107 449 449 HOH HOH A . M 3 HOH 108 450 450 HOH HOH A . M 3 HOH 109 451 451 HOH HOH A . M 3 HOH 110 452 452 HOH HOH A . M 3 HOH 111 453 453 HOH HOH A . M 3 HOH 112 454 454 HOH HOH A . M 3 HOH 113 455 455 HOH HOH A . M 3 HOH 114 456 456 HOH HOH A . M 3 HOH 115 457 457 HOH HOH A . M 3 HOH 116 458 458 HOH HOH A . M 3 HOH 117 459 459 HOH HOH A . M 3 HOH 118 460 460 HOH HOH A . M 3 HOH 119 461 461 HOH HOH A . M 3 HOH 120 462 462 HOH HOH A . M 3 HOH 121 463 463 HOH HOH A . M 3 HOH 122 464 464 HOH HOH A . M 3 HOH 123 465 465 HOH HOH A . M 3 HOH 124 466 466 HOH HOH A . M 3 HOH 125 467 467 HOH HOH A . M 3 HOH 126 468 468 HOH HOH A . M 3 HOH 127 469 469 HOH HOH A . M 3 HOH 128 470 470 HOH HOH A . M 3 HOH 129 471 471 HOH HOH A . M 3 HOH 130 472 472 HOH HOH A . M 3 HOH 131 473 473 HOH HOH A . M 3 HOH 132 474 474 HOH HOH A . M 3 HOH 133 475 475 HOH HOH A . M 3 HOH 134 476 476 HOH HOH A . M 3 HOH 135 477 477 HOH HOH A . M 3 HOH 136 478 478 HOH HOH A . M 3 HOH 137 479 479 HOH HOH A . M 3 HOH 138 480 480 HOH HOH A . M 3 HOH 139 481 481 HOH HOH A . M 3 HOH 140 482 482 HOH HOH A . M 3 HOH 141 483 483 HOH HOH A . M 3 HOH 142 484 484 HOH HOH A . M 3 HOH 143 485 485 HOH HOH A . M 3 HOH 144 486 486 HOH HOH A . M 3 HOH 145 487 487 HOH HOH A . M 3 HOH 146 488 488 HOH HOH A . M 3 HOH 147 489 489 HOH HOH A . M 3 HOH 148 490 490 HOH HOH A . M 3 HOH 149 491 491 HOH HOH A . M 3 HOH 150 492 492 HOH HOH A . M 3 HOH 151 493 493 HOH HOH A . M 3 HOH 152 494 494 HOH HOH A . M 3 HOH 153 495 495 HOH HOH A . M 3 HOH 154 496 496 HOH HOH A . M 3 HOH 155 497 497 HOH HOH A . M 3 HOH 156 498 498 HOH HOH A . M 3 HOH 157 499 499 HOH HOH A . M 3 HOH 158 500 500 HOH HOH A . M 3 HOH 159 501 501 HOH HOH A . M 3 HOH 160 502 502 HOH HOH A . M 3 HOH 161 503 503 HOH HOH A . M 3 HOH 162 504 504 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 42 A MSE 70 ? MET SELENOMETHIONINE 2 A MSE 58 A MSE 86 ? MET SELENOMETHIONINE 3 A MSE 201 A MSE 229 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2014-12-24 6 'Structure model' 1 5 2017-11-08 7 'Structure model' 1 6 2018-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Structure summary' 5 6 'Structure model' 'Refinement description' 6 7 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' software 2 7 'Structure model' citation_author # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 7 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_citation_author.name' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 11.5981 _pdbx_refine_tls.origin_y 35.8191 _pdbx_refine_tls.origin_z 9.6073 _pdbx_refine_tls.T[1][1] 0.0127 _pdbx_refine_tls.T[2][2] 0.0110 _pdbx_refine_tls.T[3][3] 0.0287 _pdbx_refine_tls.T[1][2] -0.0038 _pdbx_refine_tls.T[1][3] 0.0081 _pdbx_refine_tls.T[2][3] -0.0136 _pdbx_refine_tls.L[1][1] 1.8224 _pdbx_refine_tls.L[2][2] 1.4632 _pdbx_refine_tls.L[3][3] 1.5444 _pdbx_refine_tls.L[1][2] -0.0973 _pdbx_refine_tls.L[1][3] -0.2549 _pdbx_refine_tls.L[2][3] -0.2917 _pdbx_refine_tls.S[1][1] 0.0452 _pdbx_refine_tls.S[2][2] -0.0079 _pdbx_refine_tls.S[3][3] -0.0373 _pdbx_refine_tls.S[1][2] -0.0509 _pdbx_refine_tls.S[1][3] 0.1021 _pdbx_refine_tls.S[2][3] 0.0474 _pdbx_refine_tls.S[2][1] 0.0718 _pdbx_refine_tls.S[3][1] 0.0078 _pdbx_refine_tls.S[3][2] -0.0746 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 30 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 330 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 SCALA 3.3.15 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 6 REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 XSCALE 'December 6, 2010' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 8 XDS . ? ? ? ? 'data reduction' ? ? ? 9 SHELXD . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 3S25 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT (RESIDUES 30-330) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 40 ? ? 48.61 -123.61 2 1 ASN A 45 ? ? -99.21 35.49 3 1 ASP A 91 ? ? -126.08 -166.98 4 1 ASP A 184 ? ? 55.42 -133.80 5 1 ASN A 254 ? ? 73.45 43.38 6 1 ASN A 254 ? ? 73.04 43.96 7 1 ASN A 312 ? ? 57.03 11.46 8 1 ASN A 312 ? ? 56.00 12.72 9 1 ASP A 323 ? ? -163.20 -73.36 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 92 ? CG ? A LYS 64 CG 2 1 Y 1 A LYS 92 ? CD ? A LYS 64 CD 3 1 Y 1 A LYS 92 ? CE ? A LYS 64 CE 4 1 Y 1 A LYS 92 ? NZ ? A LYS 64 NZ 5 1 Y 1 A ASN 244 ? CG ? A ASN 216 CG 6 1 Y 1 A ASN 244 ? OD1 ? A ASN 216 OD1 7 1 Y 1 A ASN 244 ? ND2 ? A ASN 216 ND2 8 1 Y 1 A GLN 329 ? CG ? A GLN 301 CG 9 1 Y 1 A GLN 329 ? CD ? A GLN 301 CD 10 1 Y 1 A GLN 329 ? OE1 ? A GLN 301 OE1 11 1 Y 1 A GLN 329 ? NE2 ? A GLN 301 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLN 103 ? A GLN 75 3 1 Y 1 A LYS 104 ? A LYS 76 4 1 Y 1 A ILE 105 ? A ILE 77 5 1 Y 1 A THR 106 ? A THR 78 6 1 Y 1 A SER 107 ? A SER 79 7 1 Y 1 A GLN 108 ? A GLN 80 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #