data_3S5N # _entry.id 3S5N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3S5N pdb_00003s5n 10.2210/pdb3s5n/pdb RCSB RCSB065791 ? ? WWPDB D_1000065791 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-26 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_struct_conn_angle 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_ref_seq_dif 7 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.value' 19 2 'Structure model' '_struct_conn.pdbx_dist_value' 20 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 2 'Structure model' '_struct_ref_seq_dif.details' 32 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3S5N _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-23 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3S5O _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Riedel, T.J.' 1 'Lowther, W.T.' 2 # _citation.id primary _citation.title ;Structural and Biochemical Studies of Human 4-hydroxy-2-oxoglutarate Aldolase: Implications for Hydroxyproline Metabolism in Primary Hyperoxaluria. ; _citation.journal_abbrev 'Plos One' _citation.journal_volume 6 _citation.page_first e26021 _citation.page_last e26021 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21998747 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0026021 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Riedel, T.J.' 1 ? primary 'Johnson, L.C.' 2 ? primary 'Knight, J.' 3 ? primary 'Hantgan, R.R.' 4 ? primary 'Holmes, R.P.' 5 ? primary 'Lowther, W.T.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '4-hydroxy-2-oxoglutarate aldolase, mitochondrial' 32653.453 1 4.1.3.16 ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 5 water nat water 18.015 47 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dihydrodipicolinate synthase-like, DHDPS-like protein, 2-keto-4-hydroxyglutarate aldolase, KHG-aldolase, Protein 569272' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKN RLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAV VTLSQHPNIVGMKDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERLCCTGQWE DAQKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGGPCRAPLQELSPAEEEALRMDFTSNGWL ; _entity_poly.pdbx_seq_one_letter_code_can ;GPASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKN RLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAV VTLSQHPNIVGMKDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERLCCTGQWE DAQKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGGPCRAPLQELSPAEEEALRMDFTSNGWL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'SODIUM ION' NA 4 1,2-ETHANEDIOL EDO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ALA n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 GLY n 1 8 LYS n 1 9 LYS n 1 10 VAL n 1 11 ASP n 1 12 ILE n 1 13 ALA n 1 14 GLY n 1 15 ILE n 1 16 TYR n 1 17 PRO n 1 18 PRO n 1 19 VAL n 1 20 THR n 1 21 THR n 1 22 PRO n 1 23 PHE n 1 24 THR n 1 25 ALA n 1 26 THR n 1 27 ALA n 1 28 GLU n 1 29 VAL n 1 30 ASP n 1 31 TYR n 1 32 GLY n 1 33 LYS n 1 34 LEU n 1 35 GLU n 1 36 GLU n 1 37 ASN n 1 38 LEU n 1 39 HIS n 1 40 LYS n 1 41 LEU n 1 42 GLY n 1 43 THR n 1 44 PHE n 1 45 PRO n 1 46 PHE n 1 47 ARG n 1 48 GLY n 1 49 PHE n 1 50 VAL n 1 51 VAL n 1 52 GLN n 1 53 GLY n 1 54 SER n 1 55 ASN n 1 56 GLY n 1 57 GLU n 1 58 PHE n 1 59 PRO n 1 60 PHE n 1 61 LEU n 1 62 THR n 1 63 SER n 1 64 SER n 1 65 GLU n 1 66 ARG n 1 67 LEU n 1 68 GLU n 1 69 VAL n 1 70 VAL n 1 71 SER n 1 72 ARG n 1 73 VAL n 1 74 ARG n 1 75 GLN n 1 76 ALA n 1 77 MET n 1 78 PRO n 1 79 LYS n 1 80 ASN n 1 81 ARG n 1 82 LEU n 1 83 LEU n 1 84 LEU n 1 85 ALA n 1 86 GLY n 1 87 SER n 1 88 GLY n 1 89 CYS n 1 90 GLU n 1 91 SER n 1 92 THR n 1 93 GLN n 1 94 ALA n 1 95 THR n 1 96 VAL n 1 97 GLU n 1 98 MET n 1 99 THR n 1 100 VAL n 1 101 SER n 1 102 MET n 1 103 ALA n 1 104 GLN n 1 105 VAL n 1 106 GLY n 1 107 ALA n 1 108 ASP n 1 109 ALA n 1 110 ALA n 1 111 MET n 1 112 VAL n 1 113 VAL n 1 114 THR n 1 115 PRO n 1 116 CYS n 1 117 TYR n 1 118 TYR n 1 119 ARG n 1 120 GLY n 1 121 ARG n 1 122 MET n 1 123 SER n 1 124 SER n 1 125 ALA n 1 126 ALA n 1 127 LEU n 1 128 ILE n 1 129 HIS n 1 130 HIS n 1 131 TYR n 1 132 THR n 1 133 LYS n 1 134 VAL n 1 135 ALA n 1 136 ASP n 1 137 LEU n 1 138 SER n 1 139 PRO n 1 140 ILE n 1 141 PRO n 1 142 VAL n 1 143 VAL n 1 144 LEU n 1 145 TYR n 1 146 SER n 1 147 VAL n 1 148 PRO n 1 149 ALA n 1 150 ASN n 1 151 THR n 1 152 GLY n 1 153 LEU n 1 154 ASP n 1 155 LEU n 1 156 PRO n 1 157 VAL n 1 158 ASP n 1 159 ALA n 1 160 VAL n 1 161 VAL n 1 162 THR n 1 163 LEU n 1 164 SER n 1 165 GLN n 1 166 HIS n 1 167 PRO n 1 168 ASN n 1 169 ILE n 1 170 VAL n 1 171 GLY n 1 172 MET n 1 173 LYS n 1 174 ASP n 1 175 SER n 1 176 GLY n 1 177 GLY n 1 178 ASP n 1 179 VAL n 1 180 THR n 1 181 ARG n 1 182 ILE n 1 183 GLY n 1 184 LEU n 1 185 ILE n 1 186 VAL n 1 187 HIS n 1 188 LYS n 1 189 THR n 1 190 ARG n 1 191 LYS n 1 192 GLN n 1 193 ASP n 1 194 PHE n 1 195 GLN n 1 196 VAL n 1 197 LEU n 1 198 ALA n 1 199 GLY n 1 200 SER n 1 201 ALA n 1 202 GLY n 1 203 PHE n 1 204 LEU n 1 205 MET n 1 206 ALA n 1 207 SER n 1 208 TYR n 1 209 ALA n 1 210 LEU n 1 211 GLY n 1 212 ALA n 1 213 VAL n 1 214 GLY n 1 215 GLY n 1 216 VAL n 1 217 CYS n 1 218 ALA n 1 219 LEU n 1 220 ALA n 1 221 ASN n 1 222 VAL n 1 223 LEU n 1 224 GLY n 1 225 ALA n 1 226 GLN n 1 227 VAL n 1 228 CYS n 1 229 GLN n 1 230 LEU n 1 231 GLU n 1 232 ARG n 1 233 LEU n 1 234 CYS n 1 235 CYS n 1 236 THR n 1 237 GLY n 1 238 GLN n 1 239 TRP n 1 240 GLU n 1 241 ASP n 1 242 ALA n 1 243 GLN n 1 244 LYS n 1 245 LEU n 1 246 GLN n 1 247 HIS n 1 248 ARG n 1 249 LEU n 1 250 ILE n 1 251 GLU n 1 252 PRO n 1 253 ASN n 1 254 ALA n 1 255 ALA n 1 256 VAL n 1 257 THR n 1 258 ARG n 1 259 ARG n 1 260 PHE n 1 261 GLY n 1 262 ILE n 1 263 PRO n 1 264 GLY n 1 265 LEU n 1 266 LYS n 1 267 LYS n 1 268 ILE n 1 269 MET n 1 270 ASP n 1 271 TRP n 1 272 PHE n 1 273 GLY n 1 274 TYR n 1 275 TYR n 1 276 GLY n 1 277 GLY n 1 278 PRO n 1 279 CYS n 1 280 ARG n 1 281 ALA n 1 282 PRO n 1 283 LEU n 1 284 GLN n 1 285 GLU n 1 286 LEU n 1 287 SER n 1 288 PRO n 1 289 ALA n 1 290 GLU n 1 291 GLU n 1 292 GLU n 1 293 ALA n 1 294 LEU n 1 295 ARG n 1 296 MET n 1 297 ASP n 1 298 PHE n 1 299 THR n 1 300 SER n 1 301 ASN n 1 302 GLY n 1 303 TRP n 1 304 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'C10orf65, DHDPSL, HOGA1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET151 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 24 ? ? ? A . n A 1 2 PRO 2 25 ? ? ? A . n A 1 3 ALA 3 26 ? ? ? A . n A 1 4 SER 4 27 ? ? ? A . n A 1 5 GLY 5 28 ? ? ? A . n A 1 6 GLU 6 29 ? ? ? A . n A 1 7 GLY 7 30 ? ? ? A . n A 1 8 LYS 8 31 ? ? ? A . n A 1 9 LYS 9 32 ? ? ? A . n A 1 10 VAL 10 33 33 VAL VAL A . n A 1 11 ASP 11 34 34 ASP ASP A . n A 1 12 ILE 12 35 35 ILE ILE A . n A 1 13 ALA 13 36 36 ALA ALA A . n A 1 14 GLY 14 37 37 GLY GLY A . n A 1 15 ILE 15 38 38 ILE ILE A . n A 1 16 TYR 16 39 39 TYR TYR A . n A 1 17 PRO 17 40 40 PRO PRO A . n A 1 18 PRO 18 41 41 PRO PRO A . n A 1 19 VAL 19 42 42 VAL VAL A . n A 1 20 THR 20 43 43 THR THR A . n A 1 21 THR 21 44 44 THR THR A . n A 1 22 PRO 22 45 45 PRO PRO A . n A 1 23 PHE 23 46 46 PHE PHE A . n A 1 24 THR 24 47 47 THR THR A . n A 1 25 ALA 25 48 48 ALA ALA A . n A 1 26 THR 26 49 49 THR THR A . n A 1 27 ALA 27 50 50 ALA ALA A . n A 1 28 GLU 28 51 51 GLU GLU A . n A 1 29 VAL 29 52 52 VAL VAL A . n A 1 30 ASP 30 53 53 ASP ASP A . n A 1 31 TYR 31 54 54 TYR TYR A . n A 1 32 GLY 32 55 55 GLY GLY A . n A 1 33 LYS 33 56 56 LYS LYS A . n A 1 34 LEU 34 57 57 LEU LEU A . n A 1 35 GLU 35 58 58 GLU GLU A . n A 1 36 GLU 36 59 59 GLU GLU A . n A 1 37 ASN 37 60 60 ASN ASN A . n A 1 38 LEU 38 61 61 LEU LEU A . n A 1 39 HIS 39 62 62 HIS HIS A . n A 1 40 LYS 40 63 63 LYS LYS A . n A 1 41 LEU 41 64 64 LEU LEU A . n A 1 42 GLY 42 65 65 GLY GLY A . n A 1 43 THR 43 66 66 THR THR A . n A 1 44 PHE 44 67 67 PHE PHE A . n A 1 45 PRO 45 68 68 PRO PRO A . n A 1 46 PHE 46 69 69 PHE PHE A . n A 1 47 ARG 47 70 70 ARG ARG A . n A 1 48 GLY 48 71 71 GLY GLY A . n A 1 49 PHE 49 72 72 PHE PHE A . n A 1 50 VAL 50 73 73 VAL VAL A . n A 1 51 VAL 51 74 74 VAL VAL A . n A 1 52 GLN 52 75 75 GLN GLN A . n A 1 53 GLY 53 76 76 GLY GLY A . n A 1 54 SER 54 77 77 SER SER A . n A 1 55 ASN 55 78 78 ASN ASN A . n A 1 56 GLY 56 79 79 GLY GLY A . n A 1 57 GLU 57 80 80 GLU GLU A . n A 1 58 PHE 58 81 81 PHE PHE A . n A 1 59 PRO 59 82 82 PRO PRO A . n A 1 60 PHE 60 83 83 PHE PHE A . n A 1 61 LEU 61 84 84 LEU LEU A . n A 1 62 THR 62 85 85 THR THR A . n A 1 63 SER 63 86 86 SER SER A . n A 1 64 SER 64 87 87 SER SER A . n A 1 65 GLU 65 88 88 GLU GLU A . n A 1 66 ARG 66 89 89 ARG ARG A . n A 1 67 LEU 67 90 90 LEU LEU A . n A 1 68 GLU 68 91 91 GLU GLU A . n A 1 69 VAL 69 92 92 VAL VAL A . n A 1 70 VAL 70 93 93 VAL VAL A . n A 1 71 SER 71 94 94 SER SER A . n A 1 72 ARG 72 95 95 ARG ARG A . n A 1 73 VAL 73 96 96 VAL VAL A . n A 1 74 ARG 74 97 97 ARG ARG A . n A 1 75 GLN 75 98 98 GLN GLN A . n A 1 76 ALA 76 99 99 ALA ALA A . n A 1 77 MET 77 100 100 MET MET A . n A 1 78 PRO 78 101 101 PRO PRO A . n A 1 79 LYS 79 102 102 LYS LYS A . n A 1 80 ASN 80 103 103 ASN ASN A . n A 1 81 ARG 81 104 104 ARG ARG A . n A 1 82 LEU 82 105 105 LEU LEU A . n A 1 83 LEU 83 106 106 LEU LEU A . n A 1 84 LEU 84 107 107 LEU LEU A . n A 1 85 ALA 85 108 108 ALA ALA A . n A 1 86 GLY 86 109 109 GLY GLY A . n A 1 87 SER 87 110 110 SER SER A . n A 1 88 GLY 88 111 111 GLY GLY A . n A 1 89 CYS 89 112 112 CYS CYS A . n A 1 90 GLU 90 113 113 GLU GLU A . n A 1 91 SER 91 114 114 SER SER A . n A 1 92 THR 92 115 115 THR THR A . n A 1 93 GLN 93 116 116 GLN GLN A . n A 1 94 ALA 94 117 117 ALA ALA A . n A 1 95 THR 95 118 118 THR THR A . n A 1 96 VAL 96 119 119 VAL VAL A . n A 1 97 GLU 97 120 120 GLU GLU A . n A 1 98 MET 98 121 121 MET MET A . n A 1 99 THR 99 122 122 THR THR A . n A 1 100 VAL 100 123 123 VAL VAL A . n A 1 101 SER 101 124 124 SER SER A . n A 1 102 MET 102 125 125 MET MET A . n A 1 103 ALA 103 126 126 ALA ALA A . n A 1 104 GLN 104 127 127 GLN GLN A . n A 1 105 VAL 105 128 128 VAL VAL A . n A 1 106 GLY 106 129 129 GLY GLY A . n A 1 107 ALA 107 130 130 ALA ALA A . n A 1 108 ASP 108 131 131 ASP ASP A . n A 1 109 ALA 109 132 132 ALA ALA A . n A 1 110 ALA 110 133 133 ALA ALA A . n A 1 111 MET 111 134 134 MET MET A . n A 1 112 VAL 112 135 135 VAL VAL A . n A 1 113 VAL 113 136 136 VAL VAL A . n A 1 114 THR 114 137 137 THR THR A . n A 1 115 PRO 115 138 138 PRO PRO A . n A 1 116 CYS 116 139 139 CYS CYS A . n A 1 117 TYR 117 140 140 TYR TYR A . n A 1 118 TYR 118 141 141 TYR TYR A . n A 1 119 ARG 119 142 142 ARG ARG A . n A 1 120 GLY 120 143 143 GLY GLY A . n A 1 121 ARG 121 144 144 ARG ARG A . n A 1 122 MET 122 145 145 MET MET A . n A 1 123 SER 123 146 146 SER SER A . n A 1 124 SER 124 147 147 SER SER A . n A 1 125 ALA 125 148 148 ALA ALA A . n A 1 126 ALA 126 149 149 ALA ALA A . n A 1 127 LEU 127 150 150 LEU LEU A . n A 1 128 ILE 128 151 151 ILE ILE A . n A 1 129 HIS 129 152 152 HIS HIS A . n A 1 130 HIS 130 153 153 HIS HIS A . n A 1 131 TYR 131 154 154 TYR TYR A . n A 1 132 THR 132 155 155 THR THR A . n A 1 133 LYS 133 156 156 LYS LYS A . n A 1 134 VAL 134 157 157 VAL VAL A . n A 1 135 ALA 135 158 158 ALA ALA A . n A 1 136 ASP 136 159 159 ASP ASP A . n A 1 137 LEU 137 160 160 LEU LEU A . n A 1 138 SER 138 161 161 SER SER A . n A 1 139 PRO 139 162 162 PRO PRO A . n A 1 140 ILE 140 163 163 ILE ILE A . n A 1 141 PRO 141 164 164 PRO PRO A . n A 1 142 VAL 142 165 165 VAL VAL A . n A 1 143 VAL 143 166 166 VAL VAL A . n A 1 144 LEU 144 167 167 LEU LEU A . n A 1 145 TYR 145 168 168 TYR TYR A . n A 1 146 SER 146 169 169 SER SER A . n A 1 147 VAL 147 170 170 VAL VAL A . n A 1 148 PRO 148 171 171 PRO PRO A . n A 1 149 ALA 149 172 172 ALA ALA A . n A 1 150 ASN 150 173 173 ASN ASN A . n A 1 151 THR 151 174 174 THR THR A . n A 1 152 GLY 152 175 175 GLY GLY A . n A 1 153 LEU 153 176 176 LEU LEU A . n A 1 154 ASP 154 177 177 ASP ASP A . n A 1 155 LEU 155 178 178 LEU LEU A . n A 1 156 PRO 156 179 179 PRO PRO A . n A 1 157 VAL 157 180 180 VAL VAL A . n A 1 158 ASP 158 181 181 ASP ASP A . n A 1 159 ALA 159 182 182 ALA ALA A . n A 1 160 VAL 160 183 183 VAL VAL A . n A 1 161 VAL 161 184 184 VAL VAL A . n A 1 162 THR 162 185 185 THR THR A . n A 1 163 LEU 163 186 186 LEU LEU A . n A 1 164 SER 164 187 187 SER SER A . n A 1 165 GLN 165 188 188 GLN GLN A . n A 1 166 HIS 166 189 189 HIS HIS A . n A 1 167 PRO 167 190 190 PRO PRO A . n A 1 168 ASN 168 191 191 ASN ASN A . n A 1 169 ILE 169 192 192 ILE ILE A . n A 1 170 VAL 170 193 193 VAL VAL A . n A 1 171 GLY 171 194 194 GLY GLY A . n A 1 172 MET 172 195 195 MET MET A . n A 1 173 LYS 173 196 196 LYS LYS A . n A 1 174 ASP 174 197 197 ASP ASP A . n A 1 175 SER 175 198 198 SER SER A . n A 1 176 GLY 176 199 199 GLY GLY A . n A 1 177 GLY 177 200 200 GLY GLY A . n A 1 178 ASP 178 201 201 ASP ASP A . n A 1 179 VAL 179 202 202 VAL VAL A . n A 1 180 THR 180 203 203 THR THR A . n A 1 181 ARG 181 204 204 ARG ARG A . n A 1 182 ILE 182 205 205 ILE ILE A . n A 1 183 GLY 183 206 206 GLY GLY A . n A 1 184 LEU 184 207 207 LEU LEU A . n A 1 185 ILE 185 208 208 ILE ILE A . n A 1 186 VAL 186 209 209 VAL VAL A . n A 1 187 HIS 187 210 210 HIS HIS A . n A 1 188 LYS 188 211 211 LYS LYS A . n A 1 189 THR 189 212 212 THR THR A . n A 1 190 ARG 190 213 213 ARG ARG A . n A 1 191 LYS 191 214 214 LYS LYS A . n A 1 192 GLN 192 215 215 GLN GLN A . n A 1 193 ASP 193 216 216 ASP ASP A . n A 1 194 PHE 194 217 217 PHE PHE A . n A 1 195 GLN 195 218 218 GLN GLN A . n A 1 196 VAL 196 219 219 VAL VAL A . n A 1 197 LEU 197 220 220 LEU LEU A . n A 1 198 ALA 198 221 221 ALA ALA A . n A 1 199 GLY 199 222 222 GLY GLY A . n A 1 200 SER 200 223 223 SER SER A . n A 1 201 ALA 201 224 224 ALA ALA A . n A 1 202 GLY 202 225 225 GLY GLY A . n A 1 203 PHE 203 226 226 PHE PHE A . n A 1 204 LEU 204 227 227 LEU LEU A . n A 1 205 MET 205 228 228 MET MET A . n A 1 206 ALA 206 229 229 ALA ALA A . n A 1 207 SER 207 230 230 SER SER A . n A 1 208 TYR 208 231 231 TYR TYR A . n A 1 209 ALA 209 232 232 ALA ALA A . n A 1 210 LEU 210 233 233 LEU LEU A . n A 1 211 GLY 211 234 234 GLY GLY A . n A 1 212 ALA 212 235 235 ALA ALA A . n A 1 213 VAL 213 236 236 VAL VAL A . n A 1 214 GLY 214 237 237 GLY GLY A . n A 1 215 GLY 215 238 238 GLY GLY A . n A 1 216 VAL 216 239 239 VAL VAL A . n A 1 217 CYS 217 240 240 CYS CYS A . n A 1 218 ALA 218 241 241 ALA ALA A . n A 1 219 LEU 219 242 242 LEU LEU A . n A 1 220 ALA 220 243 243 ALA ALA A . n A 1 221 ASN 221 244 244 ASN ASN A . n A 1 222 VAL 222 245 245 VAL VAL A . n A 1 223 LEU 223 246 246 LEU LEU A . n A 1 224 GLY 224 247 247 GLY GLY A . n A 1 225 ALA 225 248 248 ALA ALA A . n A 1 226 GLN 226 249 249 GLN GLN A . n A 1 227 VAL 227 250 250 VAL VAL A . n A 1 228 CYS 228 251 251 CYS CYS A . n A 1 229 GLN 229 252 252 GLN GLN A . n A 1 230 LEU 230 253 253 LEU LEU A . n A 1 231 GLU 231 254 254 GLU GLU A . n A 1 232 ARG 232 255 255 ARG ARG A . n A 1 233 LEU 233 256 256 LEU LEU A . n A 1 234 CYS 234 257 257 CYS CYS A . n A 1 235 CYS 235 258 258 CYS CYS A . n A 1 236 THR 236 259 259 THR THR A . n A 1 237 GLY 237 260 260 GLY GLY A . n A 1 238 GLN 238 261 261 GLN GLN A . n A 1 239 TRP 239 262 262 TRP TRP A . n A 1 240 GLU 240 263 263 GLU GLU A . n A 1 241 ASP 241 264 264 ASP ASP A . n A 1 242 ALA 242 265 265 ALA ALA A . n A 1 243 GLN 243 266 266 GLN GLN A . n A 1 244 LYS 244 267 267 LYS LYS A . n A 1 245 LEU 245 268 268 LEU LEU A . n A 1 246 GLN 246 269 269 GLN GLN A . n A 1 247 HIS 247 270 270 HIS HIS A . n A 1 248 ARG 248 271 271 ARG ARG A . n A 1 249 LEU 249 272 272 LEU LEU A . n A 1 250 ILE 250 273 273 ILE ILE A . n A 1 251 GLU 251 274 274 GLU GLU A . n A 1 252 PRO 252 275 275 PRO PRO A . n A 1 253 ASN 253 276 276 ASN ASN A . n A 1 254 ALA 254 277 277 ALA ALA A . n A 1 255 ALA 255 278 278 ALA ALA A . n A 1 256 VAL 256 279 279 VAL VAL A . n A 1 257 THR 257 280 280 THR THR A . n A 1 258 ARG 258 281 281 ARG ARG A . n A 1 259 ARG 259 282 282 ARG ARG A . n A 1 260 PHE 260 283 283 PHE PHE A . n A 1 261 GLY 261 284 284 GLY GLY A . n A 1 262 ILE 262 285 285 ILE ILE A . n A 1 263 PRO 263 286 286 PRO PRO A . n A 1 264 GLY 264 287 287 GLY GLY A . n A 1 265 LEU 265 288 288 LEU LEU A . n A 1 266 LYS 266 289 289 LYS LYS A . n A 1 267 LYS 267 290 290 LYS LYS A . n A 1 268 ILE 268 291 291 ILE ILE A . n A 1 269 MET 269 292 292 MET MET A . n A 1 270 ASP 270 293 293 ASP ASP A . n A 1 271 TRP 271 294 294 TRP TRP A . n A 1 272 PHE 272 295 295 PHE PHE A . n A 1 273 GLY 273 296 296 GLY GLY A . n A 1 274 TYR 274 297 297 TYR TYR A . n A 1 275 TYR 275 298 298 TYR TYR A . n A 1 276 GLY 276 299 299 GLY GLY A . n A 1 277 GLY 277 300 300 GLY GLY A . n A 1 278 PRO 278 301 301 PRO PRO A . n A 1 279 CYS 279 302 302 CYS CYS A . n A 1 280 ARG 280 303 303 ARG ARG A . n A 1 281 ALA 281 304 304 ALA ALA A . n A 1 282 PRO 282 305 305 PRO PRO A . n A 1 283 LEU 283 306 306 LEU LEU A . n A 1 284 GLN 284 307 307 GLN GLN A . n A 1 285 GLU 285 308 308 GLU GLU A . n A 1 286 LEU 286 309 309 LEU LEU A . n A 1 287 SER 287 310 310 SER SER A . n A 1 288 PRO 288 311 311 PRO PRO A . n A 1 289 ALA 289 312 312 ALA ALA A . n A 1 290 GLU 290 313 313 GLU GLU A . n A 1 291 GLU 291 314 314 GLU GLU A . n A 1 292 GLU 292 315 315 GLU GLU A . n A 1 293 ALA 293 316 316 ALA ALA A . n A 1 294 LEU 294 317 317 LEU LEU A . n A 1 295 ARG 295 318 318 ARG ARG A . n A 1 296 MET 296 319 319 MET MET A . n A 1 297 ASP 297 320 320 ASP ASP A . n A 1 298 PHE 298 321 321 PHE PHE A . n A 1 299 THR 299 322 322 THR THR A . n A 1 300 SER 300 323 323 SER SER A . n A 1 301 ASN 301 324 324 ASN ASN A . n A 1 302 GLY 302 325 325 GLY GLY A . n A 1 303 TRP 303 326 326 TRP TRP A . n A 1 304 LEU 304 327 327 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 330 330 K K A . C 3 NA 1 331 331 NA NA A . D 4 EDO 1 1 1 EDO EDO A . E 4 EDO 1 2 2 EDO EDO A . F 4 EDO 1 3 3 EDO EDO A . G 4 EDO 1 4 4 EDO EDO A . H 4 EDO 1 5 5 EDO EDO A . I 4 EDO 1 6 6 EDO EDO A . J 5 HOH 1 340 340 HOH HOH A . J 5 HOH 2 341 341 HOH HOH A . J 5 HOH 3 342 342 HOH HOH A . J 5 HOH 4 343 343 HOH HOH A . J 5 HOH 5 344 344 HOH HOH A . J 5 HOH 6 345 345 HOH HOH A . J 5 HOH 7 346 346 HOH HOH A . J 5 HOH 8 347 347 HOH HOH A . J 5 HOH 9 348 348 HOH HOH A . J 5 HOH 10 349 349 HOH HOH A . J 5 HOH 11 350 350 HOH HOH A . J 5 HOH 12 351 351 HOH HOH A . J 5 HOH 13 352 352 HOH HOH A . J 5 HOH 14 353 353 HOH HOH A . J 5 HOH 15 354 354 HOH HOH A . J 5 HOH 16 355 355 HOH HOH A . J 5 HOH 17 356 356 HOH HOH A . J 5 HOH 18 357 357 HOH HOH A . J 5 HOH 19 358 358 HOH HOH A . J 5 HOH 20 359 359 HOH HOH A . J 5 HOH 21 360 360 HOH HOH A . J 5 HOH 22 361 361 HOH HOH A . J 5 HOH 23 362 362 HOH HOH A . J 5 HOH 24 363 363 HOH HOH A . J 5 HOH 25 364 364 HOH HOH A . J 5 HOH 26 365 365 HOH HOH A . J 5 HOH 27 366 366 HOH HOH A . J 5 HOH 28 367 367 HOH HOH A . J 5 HOH 29 368 368 HOH HOH A . J 5 HOH 30 369 369 HOH HOH A . J 5 HOH 31 370 370 HOH HOH A . J 5 HOH 32 371 371 HOH HOH A . J 5 HOH 33 372 372 HOH HOH A . J 5 HOH 34 373 373 HOH HOH A . J 5 HOH 35 374 374 HOH HOH A . J 5 HOH 36 375 375 HOH HOH A . J 5 HOH 37 376 376 HOH HOH A . J 5 HOH 38 377 377 HOH HOH A . J 5 HOH 39 378 378 HOH HOH A . J 5 HOH 40 379 379 HOH HOH A . J 5 HOH 41 380 380 HOH HOH A . J 5 HOH 42 381 381 HOH HOH A . J 5 HOH 43 382 382 HOH HOH A . J 5 HOH 44 383 383 HOH HOH A . J 5 HOH 45 384 384 HOH HOH A . J 5 HOH 46 385 385 HOH HOH A . J 5 HOH 47 386 386 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHASER 2.1.1 'Thu Nov 22 16:35:27 2007' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 2 REFMAC 5.5.0063 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 d*TREK . ? ? ? ? 'data reduction' ? ? ? 5 d*TREK . ? ? ? ? 'data scaling' ? ? ? # _cell.entry_id 3S5N _cell.length_a 142.143 _cell.length_b 142.143 _cell.length_c 108.070 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S5N _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 # _exptl.crystals_number 1 _exptl.entry_id 3S5N _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.81 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 74.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details 'PEG 3350, KSCN, Bis tris Propane, TCEP, Ethelyene glycol, pH 8, vapor diffusion, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-04-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_wavelength_list 1.5 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 # _reflns.entry_id 3S5N _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 59.38 _reflns.number_all ? _reflns.number_obs 22814 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 41.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs .267 _reflns_shell.meanI_over_sigI_obs 11.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3S5N _refine.ls_d_res_high 2.5000 _refine.ls_d_res_low 46.524 _refine.pdbx_ls_sigma_F 2.1 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.9400 _refine.ls_number_reflns_obs 22814 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2136 _refine.ls_R_factor_R_work 0.2120 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2458 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1170 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 42.4164 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.7800 _refine.aniso_B[2][2] -0.7800 _refine.aniso_B[3][3] 1.1700 _refine.aniso_B[1][2] -0.3900 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9430 _refine.correlation_coeff_Fo_to_Fc_free 0.9220 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.2040 _refine.overall_SU_ML 0.1270 _refine.overall_SU_B 5.6570 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 70.800 _refine.B_iso_min 27.160 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.232 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2231 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 47 _refine_hist.number_atoms_total 2304 _refine_hist.d_res_high 2.5000 _refine_hist.d_res_low 46.524 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2298 0.012 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3112 1.433 1.970 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 294 5.695 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 92 40.785 23.587 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 366 15.619 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15 16.107 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 353 0.099 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1730 0.006 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1464 0.586 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2354 1.164 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 834 2.030 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 758 3.423 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.5000 _refine_ls_shell.d_res_low 2.5650 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.number_reflns_R_work 1571 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3080 _refine_ls_shell.R_factor_R_free 0.3580 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 88 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1659 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3S5N _struct.title 'Crystal Structure of Human 4-hydroxy-2-oxoglutarate Aldolase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S5N _struct_keywords.text 'aldolase, beta barrel, hydroxyproline metabolism, LYASE' _struct_keywords.pdbx_keywords LYASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HOGA1_HUMAN _struct_ref.pdbx_db_accession Q86XE5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRL LLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVT LSQHPNIVGMKDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERLCCTGQWEDA QKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGGPCRAPLQELSPAEEEALRMDFTSNGWL ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3S5N _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 304 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q86XE5 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 327 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 26 _struct_ref_seq.pdbx_auth_seq_align_end 327 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3S5N GLY A 1 ? UNP Q86XE5 ? ? 'expression tag' 24 1 1 3S5N PRO A 2 ? UNP Q86XE5 ? ? 'expression tag' 25 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 15620 ? 1 MORE -28 ? 1 'SSA (A^2)' 39200 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_545 -x,-y-1,z -1.0000000000 0.0000000000 0.0000000000 71.0715000000 0.0000000000 -1.0000000000 0.0000000000 -123.0994489701 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -36.0233333333 4 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/3 0.5000000000 0.8660254038 0.0000000000 71.0715000000 0.8660254038 -0.5000000000 0.0000000000 -123.0994489701 0.0000000000 0.0000000000 -1.0000000000 -36.0233333333 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 30 ? GLY A 42 ? ASP A 53 GLY A 65 1 ? 13 HELX_P HELX_P2 2 GLY A 53 ? LEU A 61 ? GLY A 76 LEU A 84 5 ? 9 HELX_P HELX_P3 3 THR A 62 ? ALA A 76 ? THR A 85 ALA A 99 1 ? 15 HELX_P HELX_P4 4 SER A 91 ? VAL A 105 ? SER A 114 VAL A 128 1 ? 15 HELX_P HELX_P5 5 TYR A 118 ? MET A 122 ? TYR A 141 MET A 145 5 ? 5 HELX_P HELX_P6 6 SER A 123 ? SER A 138 ? SER A 146 SER A 161 1 ? 16 HELX_P HELX_P7 7 VAL A 147 ? GLY A 152 ? VAL A 170 GLY A 175 1 ? 6 HELX_P HELX_P8 8 PRO A 156 ? GLN A 165 ? PRO A 179 GLN A 188 1 ? 10 HELX_P HELX_P9 9 ASP A 178 ? THR A 189 ? ASP A 201 THR A 212 1 ? 12 HELX_P HELX_P10 10 SER A 200 ? GLY A 202 ? SER A 223 GLY A 225 5 ? 3 HELX_P HELX_P11 11 PHE A 203 ? GLY A 211 ? PHE A 226 GLY A 234 1 ? 9 HELX_P HELX_P12 12 ALA A 218 ? VAL A 222 ? ALA A 241 VAL A 245 5 ? 5 HELX_P HELX_P13 13 LEU A 223 ? THR A 236 ? LEU A 246 THR A 259 1 ? 14 HELX_P HELX_P14 14 GLN A 238 ? VAL A 256 ? GLN A 261 VAL A 279 1 ? 19 HELX_P HELX_P15 15 PHE A 260 ? PHE A 272 ? PHE A 283 PHE A 295 1 ? 13 HELX_P HELX_P16 16 SER A 287 ? SER A 300 ? SER A 310 SER A 323 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 164 O ? ? ? 1_555 B K . K ? ? A SER 187 A K 330 1_555 ? ? ? ? ? ? ? 2.576 ? ? metalc2 metalc ? ? A HIS 166 O ? ? ? 1_555 B K . K ? ? A HIS 189 A K 330 1_555 ? ? ? ? ? ? ? 2.673 ? ? metalc3 metalc ? ? A ILE 169 O ? ? ? 1_555 B K . K ? ? A ILE 192 A K 330 1_555 ? ? ? ? ? ? ? 2.727 ? ? metalc4 metalc ? ? A THR 189 O ? ? ? 1_555 C NA . NA ? ? A THR 212 A NA 331 1_555 ? ? ? ? ? ? ? 2.979 ? ? metalc5 metalc ? ? A GLN 192 O ? ? ? 1_555 C NA . NA ? ? A GLN 215 A NA 331 1_555 ? ? ? ? ? ? ? 2.649 ? ? metalc6 metalc ? ? A ASP 193 O ? ? ? 1_555 B K . K ? ? A ASP 216 A K 330 1_555 ? ? ? ? ? ? ? 2.709 ? ? metalc7 metalc ? ? A PHE 194 O ? ? ? 1_555 C NA . NA ? ? A PHE 217 A NA 331 1_555 ? ? ? ? ? ? ? 3.027 ? ? metalc8 metalc ? ? B K . K ? ? ? 1_555 J HOH . O ? ? A K 330 A HOH 353 1_555 ? ? ? ? ? ? ? 3.003 ? ? metalc9 metalc ? ? B K . K ? ? ? 1_555 J HOH . O ? ? A K 330 A HOH 370 1_555 ? ? ? ? ? ? ? 2.606 ? ? metalc10 metalc ? ? C NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 331 A HOH 383 1_555 ? ? ? ? ? ? ? 2.676 ? ? metalc11 metalc ? ? C NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 331 A HOH 384 1_555 ? ? ? ? ? ? ? 2.227 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 164 ? A SER 187 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? A HIS 166 ? A HIS 189 ? 1_555 89.2 ? 2 O ? A SER 164 ? A SER 187 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? A ILE 169 ? A ILE 192 ? 1_555 102.8 ? 3 O ? A HIS 166 ? A HIS 189 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? A ILE 169 ? A ILE 192 ? 1_555 81.9 ? 4 O ? A SER 164 ? A SER 187 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? A ASP 193 ? A ASP 216 ? 1_555 99.9 ? 5 O ? A HIS 166 ? A HIS 189 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? A ASP 193 ? A ASP 216 ? 1_555 167.1 ? 6 O ? A ILE 169 ? A ILE 192 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? A ASP 193 ? A ASP 216 ? 1_555 87.1 ? 7 O ? A SER 164 ? A SER 187 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? J HOH . ? A HOH 353 ? 1_555 75.2 ? 8 O ? A HIS 166 ? A HIS 189 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? J HOH . ? A HOH 353 ? 1_555 107.0 ? 9 O ? A ILE 169 ? A ILE 192 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? J HOH . ? A HOH 353 ? 1_555 170.8 ? 10 O ? A ASP 193 ? A ASP 216 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? J HOH . ? A HOH 353 ? 1_555 84.4 ? 11 O ? A SER 164 ? A SER 187 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? J HOH . ? A HOH 370 ? 1_555 159.2 ? 12 O ? A HIS 166 ? A HIS 189 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? J HOH . ? A HOH 370 ? 1_555 82.9 ? 13 O ? A ILE 169 ? A ILE 192 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? J HOH . ? A HOH 370 ? 1_555 95.1 ? 14 O ? A ASP 193 ? A ASP 216 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? J HOH . ? A HOH 370 ? 1_555 91.5 ? 15 O ? J HOH . ? A HOH 353 ? 1_555 K ? B K . ? A K 330 ? 1_555 O ? J HOH . ? A HOH 370 ? 1_555 88.7 ? 16 O ? A THR 189 ? A THR 212 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? A GLN 192 ? A GLN 215 ? 1_555 77.5 ? 17 O ? A THR 189 ? A THR 212 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? A PHE 194 ? A PHE 217 ? 1_555 116.5 ? 18 O ? A GLN 192 ? A GLN 215 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? A PHE 194 ? A PHE 217 ? 1_555 107.0 ? 19 O ? A THR 189 ? A THR 212 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? J HOH . ? A HOH 383 ? 1_555 150.9 ? 20 O ? A GLN 192 ? A GLN 215 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? J HOH . ? A HOH 383 ? 1_555 74.1 ? 21 O ? A PHE 194 ? A PHE 217 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? J HOH . ? A HOH 383 ? 1_555 67.3 ? 22 O ? A THR 189 ? A THR 212 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? J HOH . ? A HOH 384 ? 1_555 113.1 ? 23 O ? A GLN 192 ? A GLN 215 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? J HOH . ? A HOH 384 ? 1_555 74.4 ? 24 O ? A PHE 194 ? A PHE 217 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? J HOH . ? A HOH 384 ? 1_555 129.4 ? 25 O ? J HOH . ? A HOH 383 ? 1_555 NA ? C NA . ? A NA 331 ? 1_555 O ? J HOH . ? A HOH 384 ? 1_555 64.7 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 281 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 304 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 282 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 305 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 13.51 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 9 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 14 ? TYR A 16 ? GLY A 37 TYR A 39 A 2 GLY A 214 ? VAL A 216 ? GLY A 237 VAL A 239 A 3 GLN A 195 ? ALA A 198 ? GLN A 218 ALA A 221 A 4 ILE A 169 ? ASP A 174 ? ILE A 192 ASP A 197 A 5 VAL A 142 ? SER A 146 ? VAL A 165 SER A 169 A 6 ALA A 109 ? VAL A 113 ? ALA A 132 VAL A 136 A 7 LEU A 82 ? GLY A 86 ? LEU A 105 GLY A 109 A 8 GLY A 48 ? VAL A 51 ? GLY A 71 VAL A 74 A 9 PRO A 18 ? VAL A 19 ? PRO A 41 VAL A 42 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 16 ? N TYR A 39 O GLY A 215 ? O GLY A 238 A 2 3 O GLY A 214 ? O GLY A 237 N ALA A 198 ? N ALA A 221 A 3 4 O LEU A 197 ? O LEU A 220 N MET A 172 ? N MET A 195 A 4 5 O LYS A 173 ? O LYS A 196 N LEU A 144 ? N LEU A 167 A 5 6 O VAL A 143 ? O VAL A 166 N ALA A 110 ? N ALA A 133 A 6 7 O MET A 111 ? O MET A 134 N ALA A 85 ? N ALA A 108 A 7 8 O GLY A 86 ? O GLY A 109 N VAL A 51 ? N VAL A 74 A 8 9 O VAL A 50 ? O VAL A 73 N VAL A 19 ? N VAL A 42 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 330 ? 6 'BINDING SITE FOR RESIDUE K A 330' AC2 Software A NA 331 ? 5 'BINDING SITE FOR RESIDUE NA A 331' AC3 Software A EDO 1 ? 6 'BINDING SITE FOR RESIDUE EDO A 1' AC4 Software A EDO 2 ? 3 'BINDING SITE FOR RESIDUE EDO A 2' AC5 Software A EDO 3 ? 6 'BINDING SITE FOR RESIDUE EDO A 3' AC6 Software A EDO 4 ? 7 'BINDING SITE FOR RESIDUE EDO A 4' AC7 Software A EDO 5 ? 7 'BINDING SITE FOR RESIDUE EDO A 5' AC8 Software A EDO 6 ? 9 'BINDING SITE FOR RESIDUE EDO A 6' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 164 ? SER A 187 . ? 1_555 ? 2 AC1 6 HIS A 166 ? HIS A 189 . ? 1_555 ? 3 AC1 6 ILE A 169 ? ILE A 192 . ? 1_555 ? 4 AC1 6 ASP A 193 ? ASP A 216 . ? 1_555 ? 5 AC1 6 HOH J . ? HOH A 353 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH A 370 . ? 1_555 ? 7 AC2 5 THR A 189 ? THR A 212 . ? 1_555 ? 8 AC2 5 GLN A 192 ? GLN A 215 . ? 1_555 ? 9 AC2 5 PHE A 194 ? PHE A 217 . ? 1_555 ? 10 AC2 5 HOH J . ? HOH A 383 . ? 1_555 ? 11 AC2 5 HOH J . ? HOH A 384 . ? 1_555 ? 12 AC3 6 EDO E . ? EDO A 2 . ? 1_555 ? 13 AC3 6 LYS A 40 ? LYS A 63 . ? 1_555 ? 14 AC3 6 PHE A 272 ? PHE A 295 . ? 1_555 ? 15 AC3 6 GLY A 273 ? GLY A 296 . ? 1_555 ? 16 AC3 6 TYR A 274 ? TYR A 297 . ? 1_555 ? 17 AC3 6 HOH J . ? HOH A 381 . ? 1_555 ? 18 AC4 3 EDO D . ? EDO A 1 . ? 1_555 ? 19 AC4 3 LYS A 40 ? LYS A 63 . ? 1_555 ? 20 AC4 3 HOH J . ? HOH A 380 . ? 1_555 ? 21 AC5 6 VAL A 19 ? VAL A 42 . ? 1_555 ? 22 AC5 6 THR A 20 ? THR A 43 . ? 1_555 ? 23 AC5 6 PRO A 22 ? PRO A 45 . ? 1_555 ? 24 AC5 6 ASN A 37 ? ASN A 60 . ? 1_555 ? 25 AC5 6 ASN A 221 ? ASN A 244 . ? 1_555 ? 26 AC5 6 MET A 269 ? MET A 292 . ? 1_555 ? 27 AC6 7 EDO I . ? EDO A 6 . ? 1_555 ? 28 AC6 7 GLY A 120 ? GLY A 143 . ? 4_545 ? 29 AC6 7 ARG A 121 ? ARG A 144 . ? 4_545 ? 30 AC6 7 THR A 257 ? THR A 280 . ? 1_555 ? 31 AC6 7 ARG A 258 ? ARG A 281 . ? 1_555 ? 32 AC6 7 ARG A 259 ? ARG A 282 . ? 1_555 ? 33 AC6 7 GLY A 261 ? GLY A 284 . ? 1_555 ? 34 AC7 7 EDO I . ? EDO A 6 . ? 1_555 ? 35 AC7 7 SER A 54 ? SER A 77 . ? 1_555 ? 36 AC7 7 TYR A 118 ? TYR A 141 . ? 4_545 ? 37 AC7 7 ASN A 150 ? ASN A 173 . ? 1_555 ? 38 AC7 7 THR A 257 ? THR A 280 . ? 1_555 ? 39 AC7 7 HOH J . ? HOH A 385 . ? 1_555 ? 40 AC7 7 HOH J . ? HOH A 386 . ? 1_555 ? 41 AC8 9 EDO G . ? EDO A 4 . ? 1_555 ? 42 AC8 9 EDO H . ? EDO A 5 . ? 1_555 ? 43 AC8 9 TYR A 118 ? TYR A 141 . ? 4_545 ? 44 AC8 9 GLY A 120 ? GLY A 143 . ? 4_545 ? 45 AC8 9 ARG A 121 ? ARG A 144 . ? 4_545 ? 46 AC8 9 GLY A 261 ? GLY A 284 . ? 1_555 ? 47 AC8 9 ILE A 262 ? ILE A 285 . ? 1_555 ? 48 AC8 9 PRO A 263 ? PRO A 286 . ? 1_555 ? 49 AC8 9 LEU A 283 ? LEU A 306 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NZ _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 196 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 382 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 34 ? ? 36.68 96.91 2 1 CYS A 139 ? ? -142.12 -0.04 3 1 TYR A 141 ? ? -100.19 54.38 4 1 PHE A 217 ? ? -161.76 110.75 5 1 THR A 280 ? ? -123.18 -94.13 # _pdbx_phasing_MR.entry_id 3S5N _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 31.600 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 49.480 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 49.480 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 24 ? A GLY 1 2 1 Y 1 A PRO 25 ? A PRO 2 3 1 Y 1 A ALA 26 ? A ALA 3 4 1 Y 1 A SER 27 ? A SER 4 5 1 Y 1 A GLY 28 ? A GLY 5 6 1 Y 1 A GLU 29 ? A GLU 6 7 1 Y 1 A GLY 30 ? A GLY 7 8 1 Y 1 A LYS 31 ? A LYS 8 9 1 Y 1 A LYS 32 ? A LYS 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 K K K N N 193 LEU N N N N 194 LEU CA C N S 195 LEU C C N N 196 LEU O O N N 197 LEU CB C N N 198 LEU CG C N N 199 LEU CD1 C N N 200 LEU CD2 C N N 201 LEU OXT O N N 202 LEU H H N N 203 LEU H2 H N N 204 LEU HA H N N 205 LEU HB2 H N N 206 LEU HB3 H N N 207 LEU HG H N N 208 LEU HD11 H N N 209 LEU HD12 H N N 210 LEU HD13 H N N 211 LEU HD21 H N N 212 LEU HD22 H N N 213 LEU HD23 H N N 214 LEU HXT H N N 215 LYS N N N N 216 LYS CA C N S 217 LYS C C N N 218 LYS O O N N 219 LYS CB C N N 220 LYS CG C N N 221 LYS CD C N N 222 LYS CE C N N 223 LYS NZ N N N 224 LYS OXT O N N 225 LYS H H N N 226 LYS H2 H N N 227 LYS HA H N N 228 LYS HB2 H N N 229 LYS HB3 H N N 230 LYS HG2 H N N 231 LYS HG3 H N N 232 LYS HD2 H N N 233 LYS HD3 H N N 234 LYS HE2 H N N 235 LYS HE3 H N N 236 LYS HZ1 H N N 237 LYS HZ2 H N N 238 LYS HZ3 H N N 239 LYS HXT H N N 240 MET N N N N 241 MET CA C N S 242 MET C C N N 243 MET O O N N 244 MET CB C N N 245 MET CG C N N 246 MET SD S N N 247 MET CE C N N 248 MET OXT O N N 249 MET H H N N 250 MET H2 H N N 251 MET HA H N N 252 MET HB2 H N N 253 MET HB3 H N N 254 MET HG2 H N N 255 MET HG3 H N N 256 MET HE1 H N N 257 MET HE2 H N N 258 MET HE3 H N N 259 MET HXT H N N 260 NA NA NA N N 261 PHE N N N N 262 PHE CA C N S 263 PHE C C N N 264 PHE O O N N 265 PHE CB C N N 266 PHE CG C Y N 267 PHE CD1 C Y N 268 PHE CD2 C Y N 269 PHE CE1 C Y N 270 PHE CE2 C Y N 271 PHE CZ C Y N 272 PHE OXT O N N 273 PHE H H N N 274 PHE H2 H N N 275 PHE HA H N N 276 PHE HB2 H N N 277 PHE HB3 H N N 278 PHE HD1 H N N 279 PHE HD2 H N N 280 PHE HE1 H N N 281 PHE HE2 H N N 282 PHE HZ H N N 283 PHE HXT H N N 284 PRO N N N N 285 PRO CA C N S 286 PRO C C N N 287 PRO O O N N 288 PRO CB C N N 289 PRO CG C N N 290 PRO CD C N N 291 PRO OXT O N N 292 PRO H H N N 293 PRO HA H N N 294 PRO HB2 H N N 295 PRO HB3 H N N 296 PRO HG2 H N N 297 PRO HG3 H N N 298 PRO HD2 H N N 299 PRO HD3 H N N 300 PRO HXT H N N 301 SER N N N N 302 SER CA C N S 303 SER C C N N 304 SER O O N N 305 SER CB C N N 306 SER OG O N N 307 SER OXT O N N 308 SER H H N N 309 SER H2 H N N 310 SER HA H N N 311 SER HB2 H N N 312 SER HB3 H N N 313 SER HG H N N 314 SER HXT H N N 315 THR N N N N 316 THR CA C N S 317 THR C C N N 318 THR O O N N 319 THR CB C N R 320 THR OG1 O N N 321 THR CG2 C N N 322 THR OXT O N N 323 THR H H N N 324 THR H2 H N N 325 THR HA H N N 326 THR HB H N N 327 THR HG1 H N N 328 THR HG21 H N N 329 THR HG22 H N N 330 THR HG23 H N N 331 THR HXT H N N 332 TRP N N N N 333 TRP CA C N S 334 TRP C C N N 335 TRP O O N N 336 TRP CB C N N 337 TRP CG C Y N 338 TRP CD1 C Y N 339 TRP CD2 C Y N 340 TRP NE1 N Y N 341 TRP CE2 C Y N 342 TRP CE3 C Y N 343 TRP CZ2 C Y N 344 TRP CZ3 C Y N 345 TRP CH2 C Y N 346 TRP OXT O N N 347 TRP H H N N 348 TRP H2 H N N 349 TRP HA H N N 350 TRP HB2 H N N 351 TRP HB3 H N N 352 TRP HD1 H N N 353 TRP HE1 H N N 354 TRP HE3 H N N 355 TRP HZ2 H N N 356 TRP HZ3 H N N 357 TRP HH2 H N N 358 TRP HXT H N N 359 TYR N N N N 360 TYR CA C N S 361 TYR C C N N 362 TYR O O N N 363 TYR CB C N N 364 TYR CG C Y N 365 TYR CD1 C Y N 366 TYR CD2 C Y N 367 TYR CE1 C Y N 368 TYR CE2 C Y N 369 TYR CZ C Y N 370 TYR OH O N N 371 TYR OXT O N N 372 TYR H H N N 373 TYR H2 H N N 374 TYR HA H N N 375 TYR HB2 H N N 376 TYR HB3 H N N 377 TYR HD1 H N N 378 TYR HD2 H N N 379 TYR HE1 H N N 380 TYR HE2 H N N 381 TYR HH H N N 382 TYR HXT H N N 383 VAL N N N N 384 VAL CA C N S 385 VAL C C N N 386 VAL O O N N 387 VAL CB C N N 388 VAL CG1 C N N 389 VAL CG2 C N N 390 VAL OXT O N N 391 VAL H H N N 392 VAL H2 H N N 393 VAL HA H N N 394 VAL HB H N N 395 VAL HG11 H N N 396 VAL HG12 H N N 397 VAL HG13 H N N 398 VAL HG21 H N N 399 VAL HG22 H N N 400 VAL HG23 H N N 401 VAL HXT H N N 402 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # _atom_sites.entry_id 3S5N _atom_sites.fract_transf_matrix[1][1] 0.007035 _atom_sites.fract_transf_matrix[1][2] 0.004062 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008124 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009253 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N NA O S # loop_