data_3S6F # _entry.id 3S6F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3S6F pdb_00003s6f 10.2210/pdb3s6f/pdb RCSB RCSB065819 ? ? WWPDB D_1000065819 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 376366 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3S6F _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-25 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a Hypothetical acetyltransferase (DR_1678) from Deinococcus radiodurans at 1.19 A resolution' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3S6F _cell.length_a 75.168 _cell.length_b 102.524 _cell.length_c 51.511 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S6F _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical acetyltransferase' 16168.780 1 ? ? ? ? 2 non-polymer syn 'COENZYME A' 767.534 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 water nat water 18.015 236 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)TQRSLADIQFQTTLEGVTPAQLGGFFEGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALSDGILAASI PLLEVQAGWRSLGLGSEL(MSE)RRVLTELGDLY(MSE)VDLSCDDDVVPFYERLGLKRANA(MSE)FLRRYDNQAGIPA E ; _entity_poly.pdbx_seq_one_letter_code_can ;GMTQRSLADIQFQTTLEGVTPAQLGGFFEGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALSDGILAASIPLLE VQAGWRSLGLGSELMRRVLTELGDLYMVDLSCDDDVVPFYERLGLKRANAMFLRRYDNQAGIPAE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 376366 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 THR n 1 4 GLN n 1 5 ARG n 1 6 SER n 1 7 LEU n 1 8 ALA n 1 9 ASP n 1 10 ILE n 1 11 GLN n 1 12 PHE n 1 13 GLN n 1 14 THR n 1 15 THR n 1 16 LEU n 1 17 GLU n 1 18 GLY n 1 19 VAL n 1 20 THR n 1 21 PRO n 1 22 ALA n 1 23 GLN n 1 24 LEU n 1 25 GLY n 1 26 GLY n 1 27 PHE n 1 28 PHE n 1 29 GLU n 1 30 GLY n 1 31 TRP n 1 32 PRO n 1 33 ASN n 1 34 PRO n 1 35 PRO n 1 36 THR n 1 37 PRO n 1 38 GLU n 1 39 THR n 1 40 LEU n 1 41 TRP n 1 42 ARG n 1 43 ILE n 1 44 LEU n 1 45 ASP n 1 46 ARG n 1 47 ALA n 1 48 ALA n 1 49 VAL n 1 50 PHE n 1 51 VAL n 1 52 LEU n 1 53 ALA n 1 54 ARG n 1 55 THR n 1 56 PRO n 1 57 ASP n 1 58 GLY n 1 59 GLN n 1 60 VAL n 1 61 ILE n 1 62 GLY n 1 63 PHE n 1 64 VAL n 1 65 ASN n 1 66 ALA n 1 67 LEU n 1 68 SER n 1 69 ASP n 1 70 GLY n 1 71 ILE n 1 72 LEU n 1 73 ALA n 1 74 ALA n 1 75 SER n 1 76 ILE n 1 77 PRO n 1 78 LEU n 1 79 LEU n 1 80 GLU n 1 81 VAL n 1 82 GLN n 1 83 ALA n 1 84 GLY n 1 85 TRP n 1 86 ARG n 1 87 SER n 1 88 LEU n 1 89 GLY n 1 90 LEU n 1 91 GLY n 1 92 SER n 1 93 GLU n 1 94 LEU n 1 95 MSE n 1 96 ARG n 1 97 ARG n 1 98 VAL n 1 99 LEU n 1 100 THR n 1 101 GLU n 1 102 LEU n 1 103 GLY n 1 104 ASP n 1 105 LEU n 1 106 TYR n 1 107 MSE n 1 108 VAL n 1 109 ASP n 1 110 LEU n 1 111 SER n 1 112 CYS n 1 113 ASP n 1 114 ASP n 1 115 ASP n 1 116 VAL n 1 117 VAL n 1 118 PRO n 1 119 PHE n 1 120 TYR n 1 121 GLU n 1 122 ARG n 1 123 LEU n 1 124 GLY n 1 125 LEU n 1 126 LYS n 1 127 ARG n 1 128 ALA n 1 129 ASN n 1 130 ALA n 1 131 MSE n 1 132 PHE n 1 133 LEU n 1 134 ARG n 1 135 ARG n 1 136 TYR n 1 137 ASP n 1 138 ASN n 1 139 GLN n 1 140 ALA n 1 141 GLY n 1 142 ILE n 1 143 PRO n 1 144 ALA n 1 145 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DR_1678 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Deinococcus radiodurans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1299 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9RTS8_DEIRA _struct_ref.pdbx_db_accession Q9RTS8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTQRSLADIQFQTTLEGVTPAQLGGFFEGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALSDGILAASIPLLEV QAGWRSLGLGSELMRRVLTELGDLYMVDLSCDDDVVPFYERLGLKRANAMFLRRYDNQAGIPAE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3S6F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 145 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9RTS8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 144 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 144 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3S6F _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9RTS8 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 COA non-polymer . 'COENZYME A' ? 'C21 H36 N7 O16 P3 S' 767.534 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3S6F # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.07 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 59.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2M Ca(OAc)2, 10.0% PEG-8000, 0.1M Imidazole pH 8.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (ho rizontal focusing)' _diffrn_detector.pdbx_collection_date 2007-07-20 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97944 1.0 3 0.97916 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97944,0.97916 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3S6F _reflns.d_resolution_high 1.19 _reflns.d_resolution_low 39.253 _reflns.number_obs 63440 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_netI_over_sigmaI 15.9 _reflns.percent_possible_obs 99.2 _reflns.B_iso_Wilson_estimate 9.484 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.190 1.220 16760 ? 4623 0.525 2.5 0.525 ? 3.6 ? ? 98.0 1 1 1.220 1.250 16118 ? 4448 0.450 2.9 0.450 ? 3.6 ? ? 98.1 2 1 1.250 1.290 15961 ? 4385 0.407 3.2 0.407 ? 3.6 ? ? 98.5 3 1 1.290 1.330 15398 ? 4234 0.330 3.9 0.330 ? 3.6 ? ? 98.6 4 1 1.330 1.370 15004 ? 4121 0.283 4.6 0.283 ? 3.6 ? ? 98.7 5 1 1.370 1.420 14622 ? 4011 0.246 5.3 0.246 ? 3.6 ? ? 99.0 6 1 1.420 1.480 14275 ? 3909 0.194 6.7 0.194 ? 3.7 ? ? 99.1 7 1 1.480 1.540 13545 ? 3711 0.156 8.5 0.156 ? 3.6 ? ? 99.5 8 1 1.540 1.600 13230 ? 3627 0.119 11.0 0.119 ? 3.6 ? ? 99.8 9 1 1.600 1.680 12553 ? 3438 0.101 13.2 0.101 ? 3.7 ? ? 99.7 10 1 1.680 1.770 12074 ? 3313 0.086 15.7 0.086 ? 3.6 ? ? 99.9 11 1 1.770 1.880 11374 ? 3121 0.065 21.0 0.065 ? 3.6 ? ? 99.6 12 1 1.880 2.010 10730 ? 2946 0.051 27.0 0.051 ? 3.6 ? ? 99.9 13 1 2.010 2.170 10005 ? 2754 0.042 32.9 0.042 ? 3.6 ? ? 99.9 14 1 2.170 2.380 9170 ? 2534 0.039 37.0 0.039 ? 3.6 ? ? 99.8 15 1 2.380 2.660 8245 ? 2302 0.036 41.0 0.036 ? 3.6 ? ? 99.9 16 1 2.660 3.070 7251 ? 2041 0.034 44.5 0.034 ? 3.6 ? ? 99.8 17 1 3.070 3.760 6289 ? 1767 0.028 51.1 0.028 ? 3.6 ? ? 99.9 18 1 3.760 5.320 4742 ? 1366 0.026 54.3 0.026 ? 3.5 ? ? 99.5 19 1 5.320 39.253 2512 ? 789 0.031 51.6 0.031 ? 3.2 ? ? 98.3 20 1 # _refine.entry_id 3S6F _refine.ls_d_res_high 1.1900 _refine.ls_d_res_low 39.253 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.0500 _refine.ls_number_reflns_obs 63421 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. COENZYME A (COA) HAS BEEN MODELED BASED ON DENSITY. 5. THERE IS SOME UNMODELED DENSITY NEAR COA SUGGESTING THE PRESENCE OF A SMALL MOLECULE LIGAND. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1358 _refine.ls_R_factor_R_work 0.1351 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1504 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 3215 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 16.7661 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.2800 _refine.aniso_B[2][2] 0.0600 _refine.aniso_B[3][3] -0.3400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9770 _refine.correlation_coeff_Fo_to_Fc_free 0.9730 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.0300 _refine.overall_SU_ML 0.0180 _refine.overall_SU_B 0.8940 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 51.830 _refine.B_iso_min 6.760 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.320 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.031 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1111 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 236 _refine_hist.number_atoms_total 1397 _refine_hist.d_res_high 1.1900 _refine_hist.d_res_low 39.253 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1379 0.015 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 929 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1915 1.833 2.058 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2263 1.040 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 176 6.394 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 62 34.078 22.742 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 214 12.545 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 16 18.376 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 204 0.107 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1538 0.010 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 285 0.003 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 792 1.653 1.500 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 318 0.820 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1293 2.471 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 587 3.344 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 612 4.755 4.500 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2308 1.591 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 255 9.935 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 2262 4.691 3.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.1900 _refine_ls_shell.d_res_low 1.2210 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.8000 _refine_ls_shell.number_reflns_R_work 4381 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2200 _refine_ls_shell.R_factor_R_free 0.2510 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 238 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 4619 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3S6F _struct.title 'Crystal structure of a putative acetyltransferase (DR_1678) from Deinococcus radiodurans R1 at 1.19 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Acyl-CoA N-acyltransferases, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, TRANSFERASE ; _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.entry_id 3S6F # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details 'ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? ILE A 10 ? SER A 5 ILE A 9 5 ? 5 HELX_P HELX_P2 2 THR A 20 ? LEU A 24 ? THR A 19 LEU A 23 5 ? 5 HELX_P HELX_P3 3 THR A 36 ? ALA A 47 ? THR A 35 ALA A 46 1 ? 12 HELX_P HELX_P4 4 GLY A 89 ? GLY A 103 ? GLY A 88 GLY A 102 1 ? 15 HELX_P HELX_P5 5 ASP A 113 ? ASP A 115 ? ASP A 112 ASP A 114 5 ? 3 HELX_P HELX_P6 6 VAL A 116 ? LEU A 123 ? VAL A 115 LEU A 122 1 ? 8 HELX_P HELX_P7 7 ARG A 135 ? GLN A 139 ? ARG A 134 GLN A 138 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A THR 3 N ? ? A MSE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale2 covale both ? A LEU 94 C ? ? ? 1_555 A MSE 95 N ? ? A LEU 93 A MSE 94 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A MSE 95 C ? ? ? 1_555 A ARG 96 N ? ? A MSE 94 A ARG 95 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A TYR 106 C ? ? ? 1_555 A MSE 107 N ? ? A TYR 105 A MSE 106 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? A MSE 107 C ? ? ? 1_555 A VAL 108 N ? ? A MSE 106 A VAL 107 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? A ALA 130 C ? ? ? 1_555 A MSE 131 N ? ? A ALA 129 A MSE 130 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale7 covale both ? A MSE 131 C ? ? ? 1_555 A PHE 132 N ? ? A MSE 130 A PHE 131 1_555 ? ? ? ? ? ? ? 1.311 ? ? metalc1 metalc ? ? A SER 87 O ? ? ? 1_555 D CA . CA ? ? A SER 86 A CA 201 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc2 metalc ? ? A SER 87 OG ? ? ? 1_555 D CA . CA ? ? A SER 86 A CA 201 1_555 ? ? ? ? ? ? ? 2.437 ? ? metalc3 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 145 A HOH 211 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc4 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 145 A HOH 221 1_555 ? ? ? ? ? ? ? 2.477 ? ? metalc5 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 145 A HOH 231 1_555 ? ? ? ? ? ? ? 2.458 ? ? metalc6 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 145 A HOH 242 1_555 ? ? ? ? ? ? ? 2.552 ? ? metalc7 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 145 A HOH 305 1_555 ? ? ? ? ? ? ? 2.407 ? ? metalc8 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 145 A HOH 385 1_555 ? ? ? ? ? ? ? 2.237 ? ? metalc9 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 145 A HOH 388 1_555 ? ? ? ? ? ? ? 2.416 ? ? metalc10 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O A ? A CA 201 A HOH 243 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc11 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 201 A HOH 389 1_555 ? ? ? ? ? ? ? 2.305 ? ? metalc12 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 201 A HOH 390 1_555 ? ? ? ? ? ? ? 2.424 ? ? metalc13 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 201 A HOH 391 1_555 ? ? ? ? ? ? ? 2.448 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 11 ? GLN A 13 ? GLN A 10 GLN A 12 A 2 VAL A 49 ? ARG A 54 ? VAL A 48 ARG A 53 A 3 VAL A 60 ? SER A 68 ? VAL A 59 SER A 67 A 4 LEU A 79 ? VAL A 81 ? LEU A 78 VAL A 80 B 1 GLN A 11 ? GLN A 13 ? GLN A 10 GLN A 12 B 2 VAL A 49 ? ARG A 54 ? VAL A 48 ARG A 53 B 3 VAL A 60 ? SER A 68 ? VAL A 59 SER A 67 B 4 ALA A 73 ? SER A 75 ? ALA A 72 SER A 74 B 5 MSE A 107 ? ASP A 109 ? MSE A 106 ASP A 108 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 11 ? N GLN A 10 O ARG A 54 ? O ARG A 53 A 2 3 N ALA A 53 ? N ALA A 52 O ILE A 61 ? O ILE A 60 A 3 4 N PHE A 63 ? N PHE A 62 O GLU A 80 ? O GLU A 79 B 1 2 N GLN A 11 ? N GLN A 10 O ARG A 54 ? O ARG A 53 B 2 3 N ALA A 53 ? N ALA A 52 O ILE A 61 ? O ILE A 60 B 3 4 N LEU A 67 ? N LEU A 66 O SER A 75 ? O SER A 74 B 4 5 N ALA A 74 ? N ALA A 73 O MSE A 107 ? O MSE A 106 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A COA 200 ? 28 'BINDING SITE FOR RESIDUE COA A 200' AC2 Software A CA 145 ? 8 'BINDING SITE FOR RESIDUE CA A 145' AC3 Software A CA 201 ? 6 'BINDING SITE FOR RESIDUE CA A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 28 GLN A 4 ? GLN A 3 . ? 6_555 ? 2 AC1 28 LEU A 79 ? LEU A 78 . ? 1_555 ? 3 AC1 28 GLU A 80 ? GLU A 79 . ? 1_555 ? 4 AC1 28 VAL A 81 ? VAL A 80 . ? 1_555 ? 5 AC1 28 ARG A 86 ? ARG A 85 . ? 1_555 ? 6 AC1 28 SER A 87 ? SER A 86 . ? 1_555 ? 7 AC1 28 LEU A 88 ? LEU A 87 . ? 1_555 ? 8 AC1 28 GLY A 89 ? GLY A 88 . ? 1_555 ? 9 AC1 28 LEU A 90 ? LEU A 89 . ? 1_555 ? 10 AC1 28 GLY A 91 ? GLY A 90 . ? 1_555 ? 11 AC1 28 SER A 92 ? SER A 91 . ? 1_555 ? 12 AC1 28 CYS A 112 ? CYS A 111 . ? 1_555 ? 13 AC1 28 ASP A 115 ? ASP A 114 . ? 1_555 ? 14 AC1 28 VAL A 116 ? VAL A 115 . ? 1_555 ? 15 AC1 28 PHE A 119 ? PHE A 118 . ? 1_555 ? 16 AC1 28 TYR A 120 ? TYR A 119 . ? 1_555 ? 17 AC1 28 ARG A 122 ? ARG A 121 . ? 1_555 ? 18 AC1 28 HOH E . ? HOH A 206 . ? 1_555 ? 19 AC1 28 HOH E . ? HOH A 214 . ? 1_555 ? 20 AC1 28 HOH E . ? HOH A 222 . ? 1_555 ? 21 AC1 28 HOH E . ? HOH A 243 . ? 1_555 ? 22 AC1 28 HOH E . ? HOH A 263 . ? 6_554 ? 23 AC1 28 HOH E . ? HOH A 294 . ? 1_555 ? 24 AC1 28 HOH E . ? HOH A 341 . ? 1_555 ? 25 AC1 28 HOH E . ? HOH A 371 . ? 1_555 ? 26 AC1 28 HOH E . ? HOH A 391 . ? 1_555 ? 27 AC1 28 HOH E . ? HOH A 410 . ? 1_555 ? 28 AC1 28 HOH E . ? HOH A 417 . ? 1_555 ? 29 AC2 8 HOH E . ? HOH A 211 . ? 1_555 ? 30 AC2 8 HOH E . ? HOH A 221 . ? 1_555 ? 31 AC2 8 HOH E . ? HOH A 231 . ? 1_555 ? 32 AC2 8 HOH E . ? HOH A 242 . ? 1_555 ? 33 AC2 8 HOH E . ? HOH A 305 . ? 1_555 ? 34 AC2 8 HOH E . ? HOH A 339 . ? 4_566 ? 35 AC2 8 HOH E . ? HOH A 385 . ? 1_555 ? 36 AC2 8 HOH E . ? HOH A 388 . ? 1_555 ? 37 AC3 6 PRO A 32 ? PRO A 31 . ? 6_554 ? 38 AC3 6 SER A 87 ? SER A 86 . ? 1_555 ? 39 AC3 6 HOH E . ? HOH A 243 . ? 1_555 ? 40 AC3 6 HOH E . ? HOH A 389 . ? 1_555 ? 41 AC3 6 HOH E . ? HOH A 390 . ? 1_555 ? 42 AC3 6 HOH E . ? HOH A 391 . ? 1_555 ? # _atom_sites.entry_id 3S6F _atom_sites.fract_transf_matrix[1][1] 0.013304 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009754 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019413 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 GLN 4 3 3 GLN GLN A . n A 1 5 ARG 5 4 4 ARG ARG A . n A 1 6 SER 6 5 5 SER SER A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 ALA 8 7 7 ALA ALA A . n A 1 9 ASP 9 8 8 ASP ASP A . n A 1 10 ILE 10 9 9 ILE ILE A . n A 1 11 GLN 11 10 10 GLN GLN A . n A 1 12 PHE 12 11 11 PHE PHE A . n A 1 13 GLN 13 12 12 GLN GLN A . n A 1 14 THR 14 13 13 THR THR A . n A 1 15 THR 15 14 14 THR THR A . n A 1 16 LEU 16 15 15 LEU LEU A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 GLY 18 17 17 GLY GLY A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 THR 20 19 19 THR THR A . n A 1 21 PRO 21 20 20 PRO PRO A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 GLY 26 25 25 GLY GLY A . n A 1 27 PHE 27 26 26 PHE PHE A . n A 1 28 PHE 28 27 27 PHE PHE A . n A 1 29 GLU 29 28 28 GLU GLU A . n A 1 30 GLY 30 29 29 GLY GLY A . n A 1 31 TRP 31 30 30 TRP TRP A . n A 1 32 PRO 32 31 31 PRO PRO A . n A 1 33 ASN 33 32 32 ASN ASN A . n A 1 34 PRO 34 33 33 PRO PRO A . n A 1 35 PRO 35 34 34 PRO PRO A . n A 1 36 THR 36 35 35 THR THR A . n A 1 37 PRO 37 36 36 PRO PRO A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 THR 39 38 38 THR THR A . n A 1 40 LEU 40 39 39 LEU LEU A . n A 1 41 TRP 41 40 40 TRP TRP A . n A 1 42 ARG 42 41 41 ARG ARG A . n A 1 43 ILE 43 42 42 ILE ILE A . n A 1 44 LEU 44 43 43 LEU LEU A . n A 1 45 ASP 45 44 44 ASP ASP A . n A 1 46 ARG 46 45 45 ARG ARG A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 VAL 49 48 48 VAL VAL A . n A 1 50 PHE 50 49 49 PHE PHE A . n A 1 51 VAL 51 50 50 VAL VAL A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 ARG 54 53 53 ARG ARG A . n A 1 55 THR 55 54 54 THR THR A . n A 1 56 PRO 56 55 55 PRO PRO A . n A 1 57 ASP 57 56 56 ASP ASP A . n A 1 58 GLY 58 57 57 GLY GLY A . n A 1 59 GLN 59 58 58 GLN GLN A . n A 1 60 VAL 60 59 59 VAL VAL A . n A 1 61 ILE 61 60 60 ILE ILE A . n A 1 62 GLY 62 61 61 GLY GLY A . n A 1 63 PHE 63 62 62 PHE PHE A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 ASN 65 64 64 ASN ASN A . n A 1 66 ALA 66 65 65 ALA ALA A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 SER 68 67 67 SER SER A . n A 1 69 ASP 69 68 68 ASP ASP A . n A 1 70 GLY 70 69 69 GLY GLY A . n A 1 71 ILE 71 70 70 ILE ILE A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 ALA 73 72 72 ALA ALA A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 ILE 76 75 75 ILE ILE A . n A 1 77 PRO 77 76 76 PRO PRO A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 LEU 79 78 78 LEU LEU A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 VAL 81 80 80 VAL VAL A . n A 1 82 GLN 82 81 81 GLN GLN A . n A 1 83 ALA 83 82 82 ALA ALA A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 TRP 85 84 84 TRP TRP A . n A 1 86 ARG 86 85 85 ARG ARG A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 GLY 89 88 88 GLY GLY A . n A 1 90 LEU 90 89 89 LEU LEU A . n A 1 91 GLY 91 90 90 GLY GLY A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 GLU 93 92 92 GLU GLU A . n A 1 94 LEU 94 93 93 LEU LEU A . n A 1 95 MSE 95 94 94 MSE MSE A . n A 1 96 ARG 96 95 95 ARG ARG A . n A 1 97 ARG 97 96 96 ARG ARG A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 LEU 99 98 98 LEU LEU A . n A 1 100 THR 100 99 99 THR THR A . n A 1 101 GLU 101 100 100 GLU GLU A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 ASP 104 103 103 ASP ASP A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 TYR 106 105 105 TYR TYR A . n A 1 107 MSE 107 106 106 MSE MSE A . n A 1 108 VAL 108 107 107 VAL VAL A . n A 1 109 ASP 109 108 108 ASP ASP A . n A 1 110 LEU 110 109 109 LEU LEU A . n A 1 111 SER 111 110 110 SER SER A . n A 1 112 CYS 112 111 111 CYS CYS A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 ASP 114 113 113 ASP ASP A . n A 1 115 ASP 115 114 114 ASP ASP A . n A 1 116 VAL 116 115 115 VAL VAL A . n A 1 117 VAL 117 116 116 VAL VAL A . n A 1 118 PRO 118 117 117 PRO PRO A . n A 1 119 PHE 119 118 118 PHE PHE A . n A 1 120 TYR 120 119 119 TYR TYR A . n A 1 121 GLU 121 120 120 GLU GLU A . n A 1 122 ARG 122 121 121 ARG ARG A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 LEU 125 124 124 LEU LEU A . n A 1 126 LYS 126 125 125 LYS LYS A . n A 1 127 ARG 127 126 126 ARG ARG A . n A 1 128 ALA 128 127 127 ALA ALA A . n A 1 129 ASN 129 128 128 ASN ASN A . n A 1 130 ALA 130 129 129 ALA ALA A . n A 1 131 MSE 131 130 130 MSE MSE A . n A 1 132 PHE 132 131 131 PHE PHE A . n A 1 133 LEU 133 132 132 LEU LEU A . n A 1 134 ARG 134 133 133 ARG ARG A . n A 1 135 ARG 135 134 134 ARG ARG A . n A 1 136 TYR 136 135 135 TYR TYR A . n A 1 137 ASP 137 136 136 ASP ASP A . n A 1 138 ASN 138 137 137 ASN ASN A . n A 1 139 GLN 139 138 138 GLN GLN A . n A 1 140 ALA 140 139 139 ALA ALA A . n A 1 141 GLY 141 140 140 GLY GLY A . n A 1 142 ILE 142 141 141 ILE ILE A . n A 1 143 PRO 143 142 142 PRO PRO A . n A 1 144 ALA 144 143 143 ALA ALA A . n A 1 145 GLU 145 144 ? ? ? A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA 1 200 200 COA COA A . C 3 CA 1 145 200 CA CA A . D 3 CA 1 201 201 CA CA A . E 4 HOH 1 202 202 HOH HOH A . E 4 HOH 2 203 203 HOH HOH A . E 4 HOH 3 204 204 HOH HOH A . E 4 HOH 4 205 205 HOH HOH A . E 4 HOH 5 206 206 HOH HOH A . E 4 HOH 6 207 207 HOH HOH A . E 4 HOH 7 208 208 HOH HOH A . E 4 HOH 8 209 209 HOH HOH A . E 4 HOH 9 210 210 HOH HOH A . E 4 HOH 10 211 211 HOH HOH A . E 4 HOH 11 212 212 HOH HOH A . E 4 HOH 12 213 213 HOH HOH A . E 4 HOH 13 214 214 HOH HOH A . E 4 HOH 14 215 215 HOH HOH A . E 4 HOH 15 216 216 HOH HOH A . E 4 HOH 16 217 217 HOH HOH A . E 4 HOH 17 218 218 HOH HOH A . E 4 HOH 18 219 219 HOH HOH A . E 4 HOH 19 220 220 HOH HOH A . E 4 HOH 20 221 221 HOH HOH A . E 4 HOH 21 222 222 HOH HOH A . E 4 HOH 22 223 223 HOH HOH A . E 4 HOH 23 224 224 HOH HOH A . E 4 HOH 24 225 225 HOH HOH A . E 4 HOH 25 226 226 HOH HOH A . E 4 HOH 26 227 227 HOH HOH A . E 4 HOH 27 228 228 HOH HOH A . E 4 HOH 28 229 229 HOH HOH A . E 4 HOH 29 230 230 HOH HOH A . E 4 HOH 30 231 231 HOH HOH A . E 4 HOH 31 232 232 HOH HOH A . E 4 HOH 32 233 233 HOH HOH A . E 4 HOH 33 234 234 HOH HOH A . E 4 HOH 34 235 235 HOH HOH A . E 4 HOH 35 236 236 HOH HOH A . E 4 HOH 36 237 237 HOH HOH A . E 4 HOH 37 238 238 HOH HOH A . E 4 HOH 38 239 239 HOH HOH A . E 4 HOH 39 240 240 HOH HOH A . E 4 HOH 40 241 241 HOH HOH A . E 4 HOH 41 242 242 HOH HOH A . E 4 HOH 42 243 243 HOH HOH A . E 4 HOH 43 244 244 HOH HOH A . E 4 HOH 44 245 245 HOH HOH A . E 4 HOH 45 246 246 HOH HOH A . E 4 HOH 46 247 247 HOH HOH A . E 4 HOH 47 248 248 HOH HOH A . E 4 HOH 48 249 249 HOH HOH A . E 4 HOH 49 250 250 HOH HOH A . E 4 HOH 50 251 251 HOH HOH A . E 4 HOH 51 252 252 HOH HOH A . E 4 HOH 52 253 253 HOH HOH A . E 4 HOH 53 254 254 HOH HOH A . E 4 HOH 54 255 255 HOH HOH A . E 4 HOH 55 256 256 HOH HOH A . E 4 HOH 56 257 257 HOH HOH A . E 4 HOH 57 258 258 HOH HOH A . E 4 HOH 58 259 259 HOH HOH A . E 4 HOH 59 260 260 HOH HOH A . E 4 HOH 60 261 261 HOH HOH A . E 4 HOH 61 262 262 HOH HOH A . E 4 HOH 62 263 263 HOH HOH A . E 4 HOH 63 264 264 HOH HOH A . E 4 HOH 64 265 265 HOH HOH A . E 4 HOH 65 266 266 HOH HOH A . E 4 HOH 66 267 267 HOH HOH A . E 4 HOH 67 268 268 HOH HOH A . E 4 HOH 68 269 269 HOH HOH A . E 4 HOH 69 270 270 HOH HOH A . E 4 HOH 70 271 271 HOH HOH A . E 4 HOH 71 272 272 HOH HOH A . E 4 HOH 72 273 273 HOH HOH A . E 4 HOH 73 274 274 HOH HOH A . E 4 HOH 74 275 275 HOH HOH A . E 4 HOH 75 276 276 HOH HOH A . E 4 HOH 76 277 277 HOH HOH A . E 4 HOH 77 278 278 HOH HOH A . E 4 HOH 78 279 279 HOH HOH A . E 4 HOH 79 280 280 HOH HOH A . E 4 HOH 80 281 281 HOH HOH A . E 4 HOH 81 282 282 HOH HOH A . E 4 HOH 82 283 283 HOH HOH A . E 4 HOH 83 284 284 HOH HOH A . E 4 HOH 84 285 285 HOH HOH A . E 4 HOH 85 286 286 HOH HOH A . E 4 HOH 86 287 287 HOH HOH A . E 4 HOH 87 288 288 HOH HOH A . E 4 HOH 88 289 289 HOH HOH A . E 4 HOH 89 290 290 HOH HOH A . E 4 HOH 90 291 291 HOH HOH A . E 4 HOH 91 292 292 HOH HOH A . E 4 HOH 92 293 293 HOH HOH A . E 4 HOH 93 294 294 HOH HOH A . E 4 HOH 94 295 295 HOH HOH A . E 4 HOH 95 296 296 HOH HOH A . E 4 HOH 96 297 297 HOH HOH A . E 4 HOH 97 298 298 HOH HOH A . E 4 HOH 98 299 299 HOH HOH A . E 4 HOH 99 300 300 HOH HOH A . E 4 HOH 100 301 301 HOH HOH A . E 4 HOH 101 302 302 HOH HOH A . E 4 HOH 102 303 303 HOH HOH A . E 4 HOH 103 304 304 HOH HOH A . E 4 HOH 104 305 305 HOH HOH A . E 4 HOH 105 306 306 HOH HOH A . E 4 HOH 106 307 307 HOH HOH A . E 4 HOH 107 308 308 HOH HOH A . E 4 HOH 108 309 309 HOH HOH A . E 4 HOH 109 310 310 HOH HOH A . E 4 HOH 110 311 311 HOH HOH A . E 4 HOH 111 312 312 HOH HOH A . E 4 HOH 112 313 313 HOH HOH A . E 4 HOH 113 314 314 HOH HOH A . E 4 HOH 114 315 315 HOH HOH A . E 4 HOH 115 316 316 HOH HOH A . E 4 HOH 116 317 317 HOH HOH A . E 4 HOH 117 318 318 HOH HOH A . E 4 HOH 118 319 319 HOH HOH A . E 4 HOH 119 320 320 HOH HOH A . E 4 HOH 120 321 321 HOH HOH A . E 4 HOH 121 322 322 HOH HOH A . E 4 HOH 122 323 323 HOH HOH A . E 4 HOH 123 324 324 HOH HOH A . E 4 HOH 124 325 325 HOH HOH A . E 4 HOH 125 326 326 HOH HOH A . E 4 HOH 126 327 327 HOH HOH A . E 4 HOH 127 328 328 HOH HOH A . E 4 HOH 128 329 329 HOH HOH A . E 4 HOH 129 330 330 HOH HOH A . E 4 HOH 130 331 331 HOH HOH A . E 4 HOH 131 332 332 HOH HOH A . E 4 HOH 132 333 333 HOH HOH A . E 4 HOH 133 334 334 HOH HOH A . E 4 HOH 134 335 335 HOH HOH A . E 4 HOH 135 336 336 HOH HOH A . E 4 HOH 136 337 337 HOH HOH A . E 4 HOH 137 338 338 HOH HOH A . E 4 HOH 138 339 339 HOH HOH A . E 4 HOH 139 340 340 HOH HOH A . E 4 HOH 140 341 341 HOH HOH A . E 4 HOH 141 342 342 HOH HOH A . E 4 HOH 142 343 343 HOH HOH A . E 4 HOH 143 344 344 HOH HOH A . E 4 HOH 144 345 345 HOH HOH A . E 4 HOH 145 346 346 HOH HOH A . E 4 HOH 146 347 347 HOH HOH A . E 4 HOH 147 348 348 HOH HOH A . E 4 HOH 148 349 349 HOH HOH A . E 4 HOH 149 350 350 HOH HOH A . E 4 HOH 150 351 351 HOH HOH A . E 4 HOH 151 352 352 HOH HOH A . E 4 HOH 152 353 353 HOH HOH A . E 4 HOH 153 354 354 HOH HOH A . E 4 HOH 154 355 355 HOH HOH A . E 4 HOH 155 356 356 HOH HOH A . E 4 HOH 156 357 357 HOH HOH A . E 4 HOH 157 358 358 HOH HOH A . E 4 HOH 158 359 359 HOH HOH A . E 4 HOH 159 360 360 HOH HOH A . E 4 HOH 160 361 361 HOH HOH A . E 4 HOH 161 362 362 HOH HOH A . E 4 HOH 162 363 363 HOH HOH A . E 4 HOH 163 364 364 HOH HOH A . E 4 HOH 164 365 365 HOH HOH A . E 4 HOH 165 366 366 HOH HOH A . E 4 HOH 166 367 367 HOH HOH A . E 4 HOH 167 368 368 HOH HOH A . E 4 HOH 168 369 369 HOH HOH A . E 4 HOH 169 370 370 HOH HOH A . E 4 HOH 170 371 371 HOH HOH A . E 4 HOH 171 372 372 HOH HOH A . E 4 HOH 172 373 373 HOH HOH A . E 4 HOH 173 374 374 HOH HOH A . E 4 HOH 174 375 375 HOH HOH A . E 4 HOH 175 376 376 HOH HOH A . E 4 HOH 176 377 377 HOH HOH A . E 4 HOH 177 378 378 HOH HOH A . E 4 HOH 178 379 379 HOH HOH A . E 4 HOH 179 380 380 HOH HOH A . E 4 HOH 180 381 381 HOH HOH A . E 4 HOH 181 382 382 HOH HOH A . E 4 HOH 182 383 383 HOH HOH A . E 4 HOH 183 384 384 HOH HOH A . E 4 HOH 184 385 385 HOH HOH A . E 4 HOH 185 386 386 HOH HOH A . E 4 HOH 186 387 387 HOH HOH A . E 4 HOH 187 388 388 HOH HOH A . E 4 HOH 188 389 389 HOH HOH A . E 4 HOH 189 390 390 HOH HOH A . E 4 HOH 190 391 391 HOH HOH A . E 4 HOH 191 392 392 HOH HOH A . E 4 HOH 192 393 393 HOH HOH A . E 4 HOH 193 394 394 HOH HOH A . E 4 HOH 194 395 395 HOH HOH A . E 4 HOH 195 396 396 HOH HOH A . E 4 HOH 196 397 397 HOH HOH A . E 4 HOH 197 398 398 HOH HOH A . E 4 HOH 198 399 399 HOH HOH A . E 4 HOH 199 400 400 HOH HOH A . E 4 HOH 200 401 401 HOH HOH A . E 4 HOH 201 402 402 HOH HOH A . E 4 HOH 202 403 403 HOH HOH A . E 4 HOH 203 404 404 HOH HOH A . E 4 HOH 204 405 405 HOH HOH A . E 4 HOH 205 406 406 HOH HOH A . E 4 HOH 206 407 407 HOH HOH A . E 4 HOH 207 408 408 HOH HOH A . E 4 HOH 208 409 409 HOH HOH A . E 4 HOH 209 410 410 HOH HOH A . E 4 HOH 210 411 411 HOH HOH A . E 4 HOH 211 412 412 HOH HOH A . E 4 HOH 212 413 413 HOH HOH A . E 4 HOH 213 414 414 HOH HOH A . E 4 HOH 214 415 415 HOH HOH A . E 4 HOH 215 416 416 HOH HOH A . E 4 HOH 216 417 417 HOH HOH A . E 4 HOH 217 418 418 HOH HOH A . E 4 HOH 218 419 419 HOH HOH A . E 4 HOH 219 420 420 HOH HOH A . E 4 HOH 220 421 421 HOH HOH A . E 4 HOH 221 422 422 HOH HOH A . E 4 HOH 222 423 423 HOH HOH A . E 4 HOH 223 424 424 HOH HOH A . E 4 HOH 224 425 425 HOH HOH A . E 4 HOH 225 426 426 HOH HOH A . E 4 HOH 226 427 427 HOH HOH A . E 4 HOH 227 428 428 HOH HOH A . E 4 HOH 228 429 429 HOH HOH A . E 4 HOH 229 430 430 HOH HOH A . E 4 HOH 230 431 431 HOH HOH A . E 4 HOH 231 432 432 HOH HOH A . E 4 HOH 232 433 433 HOH HOH A . E 4 HOH 233 434 434 HOH HOH A . E 4 HOH 234 435 435 HOH HOH A . E 4 HOH 235 436 436 HOH HOH A . E 4 HOH 236 437 437 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 95 A MSE 94 ? MET SELENOMETHIONINE 3 A MSE 107 A MSE 106 ? MET SELENOMETHIONINE 4 A MSE 131 A MSE 130 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6980 ? 1 MORE -53 ? 1 'SSA (A^2)' 13760 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_656 -x+1,y,-z+3/2 -1.0000000000 0.0000000000 0.0000000000 75.1680000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 77.2665000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 369 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 87 ? A SER 86 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 OG ? A SER 87 ? A SER 86 ? 1_555 72.8 ? 2 O ? A SER 87 ? A SER 86 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O A E HOH . ? A HOH 243 ? 1_555 86.6 ? 3 OG ? A SER 87 ? A SER 86 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O A E HOH . ? A HOH 243 ? 1_555 80.7 ? 4 O ? A SER 87 ? A SER 86 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 389 ? 1_555 75.2 ? 5 OG ? A SER 87 ? A SER 86 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 389 ? 1_555 147.3 ? 6 O A E HOH . ? A HOH 243 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 389 ? 1_555 104.2 ? 7 O ? A SER 87 ? A SER 86 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 390 ? 1_555 143.8 ? 8 OG ? A SER 87 ? A SER 86 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 390 ? 1_555 140.1 ? 9 O A E HOH . ? A HOH 243 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 390 ? 1_555 109.5 ? 10 O ? E HOH . ? A HOH 389 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 390 ? 1_555 69.6 ? 11 O ? A SER 87 ? A SER 86 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 391 ? 1_555 142.4 ? 12 OG ? A SER 87 ? A SER 86 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 391 ? 1_555 70.8 ? 13 O A E HOH . ? A HOH 243 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 391 ? 1_555 78.6 ? 14 O ? E HOH . ? A HOH 389 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 391 ? 1_555 141.9 ? 15 O ? E HOH . ? A HOH 390 ? 1_555 CA ? D CA . ? A CA 201 ? 1_555 O ? E HOH . ? A HOH 391 ? 1_555 73.7 ? 16 O ? E HOH . ? A HOH 211 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 221 ? 1_555 79.4 ? 17 O ? E HOH . ? A HOH 211 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 231 ? 1_555 82.8 ? 18 O ? E HOH . ? A HOH 221 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 231 ? 1_555 136.4 ? 19 O ? E HOH . ? A HOH 211 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 242 ? 1_555 74.9 ? 20 O ? E HOH . ? A HOH 221 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 242 ? 1_555 70.8 ? 21 O ? E HOH . ? A HOH 231 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 242 ? 1_555 140.6 ? 22 O ? E HOH . ? A HOH 211 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 305 ? 1_555 145.6 ? 23 O ? E HOH . ? A HOH 221 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 305 ? 1_555 87.1 ? 24 O ? E HOH . ? A HOH 231 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 305 ? 1_555 126.5 ? 25 O ? E HOH . ? A HOH 242 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 305 ? 1_555 70.8 ? 26 O ? E HOH . ? A HOH 211 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 385 ? 1_555 80.2 ? 27 O ? E HOH . ? A HOH 221 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 385 ? 1_555 142.3 ? 28 O ? E HOH . ? A HOH 231 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 385 ? 1_555 71.0 ? 29 O ? E HOH . ? A HOH 242 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 385 ? 1_555 73.5 ? 30 O ? E HOH . ? A HOH 305 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 385 ? 1_555 92.3 ? 31 O ? E HOH . ? A HOH 211 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 388 ? 1_555 111.5 ? 32 O ? E HOH . ? A HOH 221 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 388 ? 1_555 75.7 ? 33 O ? E HOH . ? A HOH 231 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 388 ? 1_555 74.4 ? 34 O ? E HOH . ? A HOH 242 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 388 ? 1_555 144.1 ? 35 O ? E HOH . ? A HOH 305 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 388 ? 1_555 95.3 ? 36 O ? E HOH . ? A HOH 385 ? 1_555 CA ? C CA . ? A CA 145 ? 1_555 O ? E HOH . ? A HOH 388 ? 1_555 141.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-12-24 4 'Structure model' 1 3 2017-10-25 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_struct_assembly_auth_evidence 2 4 'Structure model' software 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_struct_conn_angle 5 5 'Structure model' pdbx_struct_special_symmetry 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.value' 22 5 'Structure model' '_struct_conn.pdbx_dist_value' 23 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 5 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 25 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 5 'Structure model' '_struct_ref_seq_dif.details' 37 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'June 12' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 3S6F _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 95 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 95 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 95 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.01 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.29 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 2 ? ? -135.33 -45.05 2 1 LEU A 71 ? ? -134.99 -32.94 3 1 ASP A 103 ? ? -88.29 40.24 4 1 ASP A 103 ? ? -90.72 43.51 5 1 ALA A 127 ? ? -138.52 -159.74 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLU 144 ? A GLU 145 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COENZYME A' COA 3 'CALCIUM ION' CA 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #