HEADER CONTRACTILE PROTEIN, PROTEIN BINDING 21-JUN-11 3SJH TITLE CRYSTAL STRUCTURE OF A CHIMERA CONTAINING THE N-TERMINAL DOMAIN TITLE 2 (RESIDUES 8-29) OF DROSOPHILA CIBOULOT AND THE C-TERMINAL DOMAIN TITLE 3 (RESIDUES 18-44) OF BOVINE THYMOSIN-BETA4, BOUND TO G-ACTIN-ATP- TITLE 4 LATRUNCULIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN, ALPHA SKELETAL MUSCLE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 3-377; COMPND 5 SYNONYM: ALPHA-ACTIN-1; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CIBOULOT/THYMOSIN BETA-4 CHIMERIC PROTEIN; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP O97428 RESIDUES 8-29, UNP P62326 RESIDUES 18-44; COMPND 10 SYNONYM: CIBOULOT, ISOFORM B, EG:EG0007.11 PROTEIN, RE50273P; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN RABBIT,JAPANESE WHITE RABBIT,DOMESTIC SOURCE 4 RABBIT,RABBITS; SOURCE 5 ORGANISM_TAXID: 9986; SOURCE 6 ORGAN: ALPHA SKELETAL MUSCLE; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER, BOS TAURUS; SOURCE 9 ORGANISM_TAXID: 7227, 9913; SOURCE 10 GENE: CIB, EG:EG0007.11, CG4944, DMEL_CG4944; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 15 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1 KEYWDS PROTEIN-PROTEIN COMPLEX, CONTRACTILE PROTEIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR L.RENAULT,C.HUSSON,M.F.CARLIER,D.DIDRY REVDAT 4 13-SEP-23 3SJH 1 REMARK SEQADV LINK REVDAT 3 26-JUL-17 3SJH 1 SOURCE REMARK REVDAT 2 26-JUN-13 3SJH 1 JRNL REVDAT 1 25-JAN-12 3SJH 0 JRNL AUTH D.DIDRY,F.X.CANTRELLE,C.HUSSON,P.ROBLIN,A.M.MOORTHY,J.PEREZ, JRNL AUTH 2 C.LE CLAINCHE,M.HERTZOG,E.GUITTET,M.F.CARLIER, JRNL AUTH 3 C.VAN HEIJENOORT,L.RENAULT JRNL TITL HOW A SINGLE RESIDUE IN INDIVIDUAL BETA-THYMOSIN/WH2 DOMAINS JRNL TITL 2 CONTROLS THEIR FUNCTIONS IN ACTIN ASSEMBLY JRNL REF EMBO J. V. 31 1000 2012 JRNL REFN ISSN 0261-4189 JRNL PMID 22193718 JRNL DOI 10.1038/EMBOJ.2011.461 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 44851 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.200 REMARK 3 FREE R VALUE TEST SET COUNT : 3229 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3019 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 213 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2970 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 61 REMARK 3 SOLVENT ATOMS : 359 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.268 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3106 ; 0.028 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4214 ; 1.946 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 376 ; 5.456 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 134 ;32.507 ;24.403 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 535 ;11.944 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;17.202 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 471 ; 0.170 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2303 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1889 ; 1.501 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3060 ; 2.496 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1217 ; 4.234 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1154 ; 6.415 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 371 REMARK 3 RESIDUE RANGE : A 501 A 503 REMARK 3 ORIGIN FOR THE GROUP (A): 53.0548 42.4983 15.3868 REMARK 3 T TENSOR REMARK 3 T11: 0.0163 T22: 0.0195 REMARK 3 T33: 0.0053 T12: -0.0045 REMARK 3 T13: 0.0066 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.6633 L22: 0.6265 REMARK 3 L33: 0.4762 L12: 0.1944 REMARK 3 L13: -0.1352 L23: -0.0112 REMARK 3 S TENSOR REMARK 3 S11: -0.0177 S12: 0.0612 S13: 0.0210 REMARK 3 S21: -0.0048 S22: 0.0198 S23: 0.0239 REMARK 3 S31: 0.0428 S32: -0.0371 S33: -0.0022 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 12 B 33 REMARK 3 ORIGIN FOR THE GROUP (A): 52.6892 32.0889 -5.8459 REMARK 3 T TENSOR REMARK 3 T11: 0.2046 T22: 0.2523 REMARK 3 T33: 0.0123 T12: -0.0664 REMARK 3 T13: 0.0231 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 5.6777 L22: 8.6994 REMARK 3 L33: 2.7350 L12: -5.0102 REMARK 3 L13: -0.9510 L23: 1.4134 REMARK 3 S TENSOR REMARK 3 S11: 0.2769 S12: 0.5746 S13: 0.0262 REMARK 3 S21: -0.5186 S22: -0.2209 S23: -0.1058 REMARK 3 S31: -0.0563 S32: -0.1370 S33: -0.0560 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3SJH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066277. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44860 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.22000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1SQK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG3350, 0.2M MGACETATE PH6.5, REMARK 280 0.45M GUANIDINE HCL, 1% DIOXANE, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.82200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.19650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.48850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.19650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.82200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.48850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 3 REMARK 465 GLU A 4 REMARK 465 THR A 5 REMARK 465 GLY A 42 REMARK 465 VAL A 43 REMARK 465 MET A 44 REMARK 465 VAL A 45 REMARK 465 GLY A 46 REMARK 465 MET A 47 REMARK 465 GLY A 48 REMARK 465 GLN A 49 REMARK 465 LYS A 50 REMARK 465 ARG A 372 REMARK 465 LYS A 373 REMARK 465 CYS A 374 REMARK 465 PHE A 375 REMARK 465 GLY B 3 REMARK 465 PRO B 4 REMARK 465 LEU B 5 REMARK 465 GLY B 6 REMARK 465 SER B 7 REMARK 465 LEU B 8 REMARK 465 LYS B 9 REMARK 465 ASP B 10 REMARK 465 LEU B 11 REMARK 465 GLU B 34 REMARK 465 THR B 35 REMARK 465 GLN B 36 REMARK 465 GLU B 37 REMARK 465 LYS B 38 REMARK 465 ASN B 39 REMARK 465 PRO B 40 REMARK 465 LEU B 41 REMARK 465 PRO B 42 REMARK 465 SER B 43 REMARK 465 LYS B 44 REMARK 465 GLU B 45 REMARK 465 THR B 46 REMARK 465 ILE B 47 REMARK 465 GLU B 48 REMARK 465 GLN B 49 REMARK 465 GLU B 50 REMARK 465 LYS B 51 REMARK 465 GLN B 52 REMARK 465 ALA B 53 REMARK 465 GLY B 54 REMARK 465 GLU B 55 REMARK 465 SER B 56 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 10 O HOH A 712 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 10 CB CYS A 10 SG -0.117 REMARK 500 ARG A 177 CZ ARG A 177 NH1 0.079 REMARK 500 SER A 300 CA SER A 300 CB 0.122 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 39 NE - CZ - NH1 ANGL. DEV. = -4.6 DEGREES REMARK 500 MET A 119 CG - SD - CE ANGL. DEV. = 11.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 181 -156.51 -160.98 REMARK 500 VAL A 201 -52.06 -134.19 REMARK 500 ASN A 296 58.83 -140.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 376 O REMARK 620 2 HOH A 377 O 76.9 REMARK 620 3 HOH A 378 O 161.1 85.2 REMARK 620 4 HOH A 379 O 89.4 90.5 97.0 REMARK 620 5 ATP A 501 O2G 75.6 151.3 120.9 97.2 REMARK 620 6 ATP A 501 O1B 80.0 85.5 92.7 169.2 81.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LAR A 503 DBREF 3SJH A 1 375 UNP P68135 ACTS_RABIT 3 377 DBREF 3SJH B 8 29 UNP O97428 O97428_DROME 8 29 DBREF 3SJH B 30 56 UNP P62326 TYB4_BOVIN 18 44 SEQADV 3SJH GLY B 3 UNP O97428 CLONING ARTIFACT SEQADV 3SJH PRO B 4 UNP O97428 CLONING ARTIFACT SEQADV 3SJH LEU B 5 UNP O97428 CLONING ARTIFACT SEQADV 3SJH GLY B 6 UNP O97428 CLONING ARTIFACT SEQADV 3SJH SER B 7 UNP O97428 CLONING ARTIFACT SEQRES 1 A 375 ASP GLU ASP GLU THR THR ALA LEU VAL CYS ASP ASN GLY SEQRES 2 A 375 SER GLY LEU VAL LYS ALA GLY PHE ALA GLY ASP ASP ALA SEQRES 3 A 375 PRO ARG ALA VAL PHE PRO SER ILE VAL GLY ARG PRO ARG SEQRES 4 A 375 HIS GLN GLY VAL MET VAL GLY MET GLY GLN LYS ASP SER SEQRES 5 A 375 TYR VAL GLY ASP GLU ALA GLN SER LYS ARG GLY ILE LEU SEQRES 6 A 375 THR LEU LYS TYR PRO ILE GLU HIS GLY ILE ILE THR ASN SEQRES 7 A 375 TRP ASP ASP MET GLU LYS ILE TRP HIS HIS THR PHE TYR SEQRES 8 A 375 ASN GLU LEU ARG VAL ALA PRO GLU GLU HIS PRO THR LEU SEQRES 9 A 375 LEU THR GLU ALA PRO LEU ASN PRO LYS ALA ASN ARG GLU SEQRES 10 A 375 LYS MET THR GLN ILE MET PHE GLU THR PHE ASN VAL PRO SEQRES 11 A 375 ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SER LEU TYR SEQRES 12 A 375 ALA SER GLY ARG THR THR GLY ILE VAL LEU ASP SER GLY SEQRES 13 A 375 ASP GLY VAL THR HIS ASN VAL PRO ILE TYR GLU GLY TYR SEQRES 14 A 375 ALA LEU PRO HIS ALA ILE MET ARG LEU ASP LEU ALA GLY SEQRES 15 A 375 ARG ASP LEU THR ASP TYR LEU MET LYS ILE LEU THR GLU SEQRES 16 A 375 ARG GLY TYR SER PHE VAL THR THR ALA GLU ARG GLU ILE SEQRES 17 A 375 VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR VAL ALA LEU SEQRES 18 A 375 ASP PHE GLU ASN GLU MET ALA THR ALA ALA SER SER SER SEQRES 19 A 375 SER LEU GLU LYS SER TYR GLU LEU PRO ASP GLY GLN VAL SEQRES 20 A 375 ILE THR ILE GLY ASN GLU ARG PHE ARG CYS PRO GLU THR SEQRES 21 A 375 LEU PHE GLN PRO SER PHE ILE GLY MET GLU SER ALA GLY SEQRES 22 A 375 ILE HIS GLU THR THR TYR ASN SER ILE MET LYS CYS ASP SEQRES 23 A 375 ILE ASP ILE ARG LYS ASP LEU TYR ALA ASN ASN VAL MET SEQRES 24 A 375 SER GLY GLY THR THR MET TYR PRO GLY ILE ALA ASP ARG SEQRES 25 A 375 MET GLN LYS GLU ILE THR ALA LEU ALA PRO SER THR MET SEQRES 26 A 375 LYS ILE LYS ILE ILE ALA PRO PRO GLU ARG LYS TYR SER SEQRES 27 A 375 VAL TRP ILE GLY GLY SER ILE LEU ALA SER LEU SER THR SEQRES 28 A 375 PHE GLN GLN MET TRP ILE THR LYS GLN GLU TYR ASP GLU SEQRES 29 A 375 ALA GLY PRO SER ILE VAL HIS ARG LYS CYS PHE SEQRES 1 B 54 GLY PRO LEU GLY SER LEU LYS ASP LEU PRO LYS VAL ALA SEQRES 2 B 54 GLU ASN LEU LYS SER GLN LEU GLU GLY PHE ASN GLN ASP SEQRES 3 B 54 LYS LEU LYS LYS THR GLU THR GLN GLU LYS ASN PRO LEU SEQRES 4 B 54 PRO SER LYS GLU THR ILE GLU GLN GLU LYS GLN ALA GLY SEQRES 5 B 54 GLU SER HET ATP A 501 31 HET MG A 502 1 HET LAR A 503 29 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM LAR LATRUNCULIN A HETSYN LAR 4-(17-HYDROXY-5,12-DIMETHYL-3-OXO-2,16- HETSYN 2 LAR DIOXABICYCLO[13.3.1]NONADECA-4,8,10-TRIEN-17-YL)-2- HETSYN 3 LAR THIAZOLIDINONE FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 MG MG 2+ FORMUL 5 LAR C22 H31 N O5 S FORMUL 6 HOH *359(H2 O) HELIX 1 1 GLY A 55 LYS A 61 1 7 HELIX 2 2 ASN A 78 ASN A 92 1 15 HELIX 3 3 ALA A 97 HIS A 101 5 5 HELIX 4 4 PRO A 112 THR A 126 1 15 HELIX 5 5 GLN A 137 SER A 145 1 9 HELIX 6 6 PRO A 172 ILE A 175 5 4 HELIX 7 7 ALA A 181 ARG A 196 1 16 HELIX 8 8 THR A 202 CYS A 217 1 16 HELIX 9 9 ASP A 222 SER A 233 1 12 HELIX 10 10 ASN A 252 THR A 260 1 9 HELIX 11 11 LEU A 261 PHE A 262 5 2 HELIX 12 12 GLN A 263 GLY A 268 5 6 HELIX 13 13 GLY A 273 CYS A 285 1 13 HELIX 14 14 ASP A 286 ASP A 288 5 3 HELIX 15 15 ILE A 289 ALA A 295 1 7 HELIX 16 16 GLY A 301 MET A 305 5 5 HELIX 17 17 GLY A 308 ALA A 321 1 14 HELIX 18 18 TYR A 337 LEU A 349 1 13 HELIX 19 19 SER A 350 TRP A 356 5 7 HELIX 20 20 LYS A 359 GLY A 366 1 8 HELIX 21 21 PRO A 367 HIS A 371 5 5 HELIX 22 22 PRO B 12 PHE B 25 1 14 HELIX 23 23 ASN B 26 LEU B 30 5 5 SHEET 1 A 6 ALA A 29 PRO A 32 0 SHEET 2 A 6 LEU A 16 PHE A 21 -1 N VAL A 17 O PHE A 31 SHEET 3 A 6 LEU A 8 ASN A 12 -1 N ASP A 11 O LYS A 18 SHEET 4 A 6 THR A 103 GLU A 107 1 O LEU A 104 N LEU A 8 SHEET 5 A 6 ALA A 131 ILE A 136 1 O TYR A 133 N LEU A 105 SHEET 6 A 6 ILE A 357 THR A 358 -1 O ILE A 357 N MET A 132 SHEET 1 B 3 TYR A 53 VAL A 54 0 SHEET 2 B 3 VAL A 35 PRO A 38 -1 N GLY A 36 O TYR A 53 SHEET 3 B 3 LEU A 65 LYS A 68 -1 O THR A 66 N ARG A 37 SHEET 1 C 2 ILE A 71 GLU A 72 0 SHEET 2 C 2 ILE A 75 ILE A 76 -1 O ILE A 75 N GLU A 72 SHEET 1 D 3 TYR A 169 ALA A 170 0 SHEET 2 D 3 THR A 160 TYR A 166 -1 N TYR A 166 O TYR A 169 SHEET 3 D 3 MET A 176 LEU A 178 -1 O LEU A 178 N THR A 160 SHEET 1 E 5 TYR A 169 ALA A 170 0 SHEET 2 E 5 THR A 160 TYR A 166 -1 N TYR A 166 O TYR A 169 SHEET 3 E 5 GLY A 150 SER A 155 -1 N GLY A 150 O ILE A 165 SHEET 4 E 5 ASN A 297 SER A 300 1 O SER A 300 N LEU A 153 SHEET 5 E 5 ILE A 329 ILE A 330 1 O ILE A 330 N ASN A 297 SHEET 1 F 2 LYS A 238 GLU A 241 0 SHEET 2 F 2 VAL A 247 ILE A 250 -1 O ILE A 250 N LYS A 238 LINK O HOH A 376 MG MG A 502 1555 1555 2.42 LINK O HOH A 377 MG MG A 502 1555 1555 2.23 LINK O HOH A 378 MG MG A 502 1555 1555 1.92 LINK O HOH A 379 MG MG A 502 1555 1555 2.05 LINK O2G ATP A 501 MG MG A 502 1555 1555 2.08 LINK O1B ATP A 501 MG MG A 502 1555 1555 2.29 SITE 1 AC1 29 GLY A 13 SER A 14 GLY A 15 LEU A 16 SITE 2 AC1 29 LYS A 18 GLY A 156 ASP A 157 GLY A 158 SITE 3 AC1 29 VAL A 159 GLY A 182 ARG A 210 LYS A 213 SITE 4 AC1 29 GLU A 214 GLY A 301 GLY A 302 THR A 303 SITE 5 AC1 29 MET A 305 TYR A 306 HOH A 376 HOH A 377 SITE 6 AC1 29 HOH A 378 HOH A 379 HOH A 380 HOH A 382 SITE 7 AC1 29 HOH A 386 HOH A 393 HOH A 422 HOH A 463 SITE 8 AC1 29 MG A 502 SITE 1 AC2 5 HOH A 376 HOH A 377 HOH A 378 HOH A 379 SITE 2 AC2 5 ATP A 501 SITE 1 AC3 13 GLY A 15 LEU A 16 PRO A 32 GLN A 59 SITE 2 AC3 13 TYR A 69 ASP A 157 GLY A 182 ARG A 183 SITE 3 AC3 13 THR A 186 ARG A 206 GLU A 207 ARG A 210 SITE 4 AC3 13 HOH A 389 CRYST1 67.644 74.977 86.393 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014783 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011575 0.00000