data_3SWK # _entry.id 3SWK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SWK pdb_00003swk 10.2210/pdb3swk/pdb RCSB RCSB066741 ? ? WWPDB D_1000066741 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-15 2 'Structure model' 1 1 2013-07-03 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 3SWK _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-07-14 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3SSU 'Crystal structure of vimentin coil1A/1B fragment' unspecified PDB 3S4R 'Crystal structure of vimentin coil1A/1B fragment with a stabilizing mutation' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chernyatina, A.A.' 1 'Strelkov, S.V.' 2 # _citation.id primary _citation.title 'Atomic structure of the vimentin central alpha-helical domain and its implications for intermediate filament assembly.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 109 _citation.page_first 13620 _citation.page_last 13625 _citation.year 2012 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22869704 _citation.pdbx_database_id_DOI 10.1073/pnas.1206836109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chernyatina, A.A.' 1 ? primary 'Nicolet, S.' 2 ? primary 'Aebi, U.' 3 ? primary 'Herrmann, H.' 4 ? primary 'Strelkov, S.V.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Vimentin 10397.688 2 ? ? 'coil 1B fragment (UNP residues 153-238)' ? 2 water nat water 18.015 247 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIA FLKKLH ; _entity_poly.pdbx_seq_one_letter_code_can ;EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIA FLKKLH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 MET n 1 3 ARG n 1 4 GLU n 1 5 LEU n 1 6 ARG n 1 7 ARG n 1 8 GLN n 1 9 VAL n 1 10 ASP n 1 11 GLN n 1 12 LEU n 1 13 THR n 1 14 ASN n 1 15 ASP n 1 16 LYS n 1 17 ALA n 1 18 ARG n 1 19 VAL n 1 20 GLU n 1 21 VAL n 1 22 GLU n 1 23 ARG n 1 24 ASP n 1 25 ASN n 1 26 LEU n 1 27 ALA n 1 28 GLU n 1 29 ASP n 1 30 ILE n 1 31 MET n 1 32 ARG n 1 33 LEU n 1 34 ARG n 1 35 GLU n 1 36 LYS n 1 37 LEU n 1 38 GLN n 1 39 GLU n 1 40 GLU n 1 41 MET n 1 42 LEU n 1 43 GLN n 1 44 ARG n 1 45 GLU n 1 46 GLU n 1 47 ALA n 1 48 GLU n 1 49 ASN n 1 50 THR n 1 51 LEU n 1 52 GLN n 1 53 SER n 1 54 PHE n 1 55 ARG n 1 56 GLN n 1 57 ASP n 1 58 VAL n 1 59 ASP n 1 60 ASN n 1 61 ALA n 1 62 SER n 1 63 LEU n 1 64 ALA n 1 65 ARG n 1 66 LEU n 1 67 ASP n 1 68 LEU n 1 69 GLU n 1 70 ARG n 1 71 LYS n 1 72 VAL n 1 73 GLU n 1 74 SER n 1 75 LEU n 1 76 GLN n 1 77 GLU n 1 78 GLU n 1 79 ILE n 1 80 ALA n 1 81 PHE n 1 82 LEU n 1 83 LYS n 1 84 LYS n 1 85 LEU n 1 86 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'FLJ36605, VIM' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)Rosetta' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETHSUL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 153 153 GLU GLU A . n A 1 2 MET 2 154 154 MET MET A . n A 1 3 ARG 3 155 155 ARG ARG A . n A 1 4 GLU 4 156 156 GLU GLU A . n A 1 5 LEU 5 157 157 LEU LEU A . n A 1 6 ARG 6 158 158 ARG ARG A . n A 1 7 ARG 7 159 159 ARG ARG A . n A 1 8 GLN 8 160 160 GLN GLN A . n A 1 9 VAL 9 161 161 VAL VAL A . n A 1 10 ASP 10 162 162 ASP ASP A . n A 1 11 GLN 11 163 163 GLN GLN A . n A 1 12 LEU 12 164 164 LEU LEU A . n A 1 13 THR 13 165 165 THR THR A . n A 1 14 ASN 14 166 166 ASN ASN A . n A 1 15 ASP 15 167 167 ASP ASP A . n A 1 16 LYS 16 168 168 LYS LYS A . n A 1 17 ALA 17 169 169 ALA ALA A . n A 1 18 ARG 18 170 170 ARG ARG A . n A 1 19 VAL 19 171 171 VAL VAL A . n A 1 20 GLU 20 172 172 GLU GLU A . n A 1 21 VAL 21 173 173 VAL VAL A . n A 1 22 GLU 22 174 174 GLU GLU A . n A 1 23 ARG 23 175 175 ARG ARG A . n A 1 24 ASP 24 176 176 ASP ASP A . n A 1 25 ASN 25 177 177 ASN ASN A . n A 1 26 LEU 26 178 178 LEU LEU A . n A 1 27 ALA 27 179 179 ALA ALA A . n A 1 28 GLU 28 180 180 GLU GLU A . n A 1 29 ASP 29 181 181 ASP ASP A . n A 1 30 ILE 30 182 182 ILE ILE A . n A 1 31 MET 31 183 183 MET MET A . n A 1 32 ARG 32 184 184 ARG ARG A . n A 1 33 LEU 33 185 185 LEU LEU A . n A 1 34 ARG 34 186 186 ARG ARG A . n A 1 35 GLU 35 187 187 GLU GLU A . n A 1 36 LYS 36 188 188 LYS LYS A . n A 1 37 LEU 37 189 189 LEU LEU A . n A 1 38 GLN 38 190 190 GLN GLN A . n A 1 39 GLU 39 191 191 GLU GLU A . n A 1 40 GLU 40 192 192 GLU GLU A . n A 1 41 MET 41 193 193 MET MET A . n A 1 42 LEU 42 194 194 LEU LEU A . n A 1 43 GLN 43 195 195 GLN GLN A . n A 1 44 ARG 44 196 196 ARG ARG A . n A 1 45 GLU 45 197 197 GLU GLU A . n A 1 46 GLU 46 198 198 GLU GLU A . n A 1 47 ALA 47 199 199 ALA ALA A . n A 1 48 GLU 48 200 200 GLU GLU A . n A 1 49 ASN 49 201 201 ASN ASN A . n A 1 50 THR 50 202 202 THR THR A . n A 1 51 LEU 51 203 203 LEU LEU A . n A 1 52 GLN 52 204 204 GLN GLN A . n A 1 53 SER 53 205 205 SER SER A . n A 1 54 PHE 54 206 206 PHE PHE A . n A 1 55 ARG 55 207 207 ARG ARG A . n A 1 56 GLN 56 208 208 GLN GLN A . n A 1 57 ASP 57 209 209 ASP ASP A . n A 1 58 VAL 58 210 210 VAL VAL A . n A 1 59 ASP 59 211 211 ASP ASP A . n A 1 60 ASN 60 212 212 ASN ASN A . n A 1 61 ALA 61 213 213 ALA ALA A . n A 1 62 SER 62 214 214 SER SER A . n A 1 63 LEU 63 215 215 LEU LEU A . n A 1 64 ALA 64 216 216 ALA ALA A . n A 1 65 ARG 65 217 217 ARG ARG A . n A 1 66 LEU 66 218 218 LEU LEU A . n A 1 67 ASP 67 219 219 ASP ASP A . n A 1 68 LEU 68 220 220 LEU LEU A . n A 1 69 GLU 69 221 221 GLU GLU A . n A 1 70 ARG 70 222 222 ARG ARG A . n A 1 71 LYS 71 223 223 LYS LYS A . n A 1 72 VAL 72 224 224 VAL VAL A . n A 1 73 GLU 73 225 225 GLU GLU A . n A 1 74 SER 74 226 226 SER SER A . n A 1 75 LEU 75 227 227 LEU LEU A . n A 1 76 GLN 76 228 228 GLN GLN A . n A 1 77 GLU 77 229 229 GLU GLU A . n A 1 78 GLU 78 230 230 GLU GLU A . n A 1 79 ILE 79 231 231 ILE ILE A . n A 1 80 ALA 80 232 232 ALA ALA A . n A 1 81 PHE 81 233 233 PHE PHE A . n A 1 82 LEU 82 234 234 LEU LEU A . n A 1 83 LYS 83 235 235 LYS LYS A . n A 1 84 LYS 84 236 236 LYS LYS A . n A 1 85 LEU 85 237 237 LEU LEU A . n A 1 86 HIS 86 238 238 HIS HIS A . n B 1 1 GLU 1 153 153 GLU GLU B . n B 1 2 MET 2 154 154 MET MET B . n B 1 3 ARG 3 155 155 ARG ARG B . n B 1 4 GLU 4 156 156 GLU GLU B . n B 1 5 LEU 5 157 157 LEU LEU B . n B 1 6 ARG 6 158 158 ARG ARG B . n B 1 7 ARG 7 159 159 ARG ARG B . n B 1 8 GLN 8 160 160 GLN GLN B . n B 1 9 VAL 9 161 161 VAL VAL B . n B 1 10 ASP 10 162 162 ASP ASP B . n B 1 11 GLN 11 163 163 GLN GLN B . n B 1 12 LEU 12 164 164 LEU LEU B . n B 1 13 THR 13 165 165 THR THR B . n B 1 14 ASN 14 166 166 ASN ASN B . n B 1 15 ASP 15 167 167 ASP ASP B . n B 1 16 LYS 16 168 168 LYS LYS B . n B 1 17 ALA 17 169 169 ALA ALA B . n B 1 18 ARG 18 170 170 ARG ARG B . n B 1 19 VAL 19 171 171 VAL VAL B . n B 1 20 GLU 20 172 172 GLU GLU B . n B 1 21 VAL 21 173 173 VAL VAL B . n B 1 22 GLU 22 174 174 GLU GLU B . n B 1 23 ARG 23 175 175 ARG ARG B . n B 1 24 ASP 24 176 176 ASP ASP B . n B 1 25 ASN 25 177 177 ASN ASN B . n B 1 26 LEU 26 178 178 LEU LEU B . n B 1 27 ALA 27 179 179 ALA ALA B . n B 1 28 GLU 28 180 180 GLU GLU B . n B 1 29 ASP 29 181 181 ASP ASP B . n B 1 30 ILE 30 182 182 ILE ILE B . n B 1 31 MET 31 183 183 MET MET B . n B 1 32 ARG 32 184 184 ARG ARG B . n B 1 33 LEU 33 185 185 LEU LEU B . n B 1 34 ARG 34 186 186 ARG ARG B . n B 1 35 GLU 35 187 187 GLU GLU B . n B 1 36 LYS 36 188 188 LYS LYS B . n B 1 37 LEU 37 189 189 LEU LEU B . n B 1 38 GLN 38 190 190 GLN GLN B . n B 1 39 GLU 39 191 191 GLU GLU B . n B 1 40 GLU 40 192 192 GLU GLU B . n B 1 41 MET 41 193 193 MET MET B . n B 1 42 LEU 42 194 194 LEU LEU B . n B 1 43 GLN 43 195 195 GLN GLN B . n B 1 44 ARG 44 196 196 ARG ARG B . n B 1 45 GLU 45 197 197 GLU GLU B . n B 1 46 GLU 46 198 198 GLU GLU B . n B 1 47 ALA 47 199 199 ALA ALA B . n B 1 48 GLU 48 200 200 GLU GLU B . n B 1 49 ASN 49 201 201 ASN ASN B . n B 1 50 THR 50 202 202 THR THR B . n B 1 51 LEU 51 203 203 LEU LEU B . n B 1 52 GLN 52 204 204 GLN GLN B . n B 1 53 SER 53 205 205 SER SER B . n B 1 54 PHE 54 206 206 PHE PHE B . n B 1 55 ARG 55 207 207 ARG ARG B . n B 1 56 GLN 56 208 208 GLN GLN B . n B 1 57 ASP 57 209 209 ASP ASP B . n B 1 58 VAL 58 210 210 VAL VAL B . n B 1 59 ASP 59 211 211 ASP ASP B . n B 1 60 ASN 60 212 212 ASN ASN B . n B 1 61 ALA 61 213 213 ALA ALA B . n B 1 62 SER 62 214 214 SER SER B . n B 1 63 LEU 63 215 215 LEU LEU B . n B 1 64 ALA 64 216 216 ALA ALA B . n B 1 65 ARG 65 217 217 ARG ARG B . n B 1 66 LEU 66 218 218 LEU LEU B . n B 1 67 ASP 67 219 219 ASP ASP B . n B 1 68 LEU 68 220 220 LEU LEU B . n B 1 69 GLU 69 221 221 GLU GLU B . n B 1 70 ARG 70 222 222 ARG ARG B . n B 1 71 LYS 71 223 223 LYS LYS B . n B 1 72 VAL 72 224 224 VAL VAL B . n B 1 73 GLU 73 225 225 GLU GLU B . n B 1 74 SER 74 226 226 SER SER B . n B 1 75 LEU 75 227 227 LEU LEU B . n B 1 76 GLN 76 228 228 GLN GLN B . n B 1 77 GLU 77 229 229 GLU GLU B . n B 1 78 GLU 78 230 230 GLU GLU B . n B 1 79 ILE 79 231 231 ILE ILE B . n B 1 80 ALA 80 232 232 ALA ALA B . n B 1 81 PHE 81 233 233 PHE PHE B . n B 1 82 LEU 82 234 234 LEU LEU B . n B 1 83 LYS 83 235 235 LYS LYS B . n B 1 84 LYS 84 236 236 LYS LYS B . n B 1 85 LEU 85 237 237 LEU LEU B . n B 1 86 HIS 86 238 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 1 1 HOH HOH A . C 2 HOH 2 3 3 HOH HOH A . C 2 HOH 3 4 4 HOH HOH A . C 2 HOH 4 5 5 HOH HOH A . C 2 HOH 5 6 6 HOH HOH A . C 2 HOH 6 8 8 HOH HOH A . C 2 HOH 7 10 10 HOH HOH A . C 2 HOH 8 11 11 HOH HOH A . C 2 HOH 9 12 12 HOH HOH A . C 2 HOH 10 13 13 HOH HOH A . C 2 HOH 11 14 14 HOH HOH A . C 2 HOH 12 15 15 HOH HOH A . C 2 HOH 13 17 17 HOH HOH A . C 2 HOH 14 18 18 HOH HOH A . C 2 HOH 15 19 19 HOH HOH A . C 2 HOH 16 20 20 HOH HOH A . C 2 HOH 17 21 21 HOH HOH A . C 2 HOH 18 24 24 HOH HOH A . C 2 HOH 19 25 25 HOH HOH A . C 2 HOH 20 27 27 HOH HOH A . C 2 HOH 21 29 29 HOH HOH A . C 2 HOH 22 30 30 HOH HOH A . C 2 HOH 23 32 32 HOH HOH A . C 2 HOH 24 33 33 HOH HOH A . C 2 HOH 25 34 34 HOH HOH A . C 2 HOH 26 35 35 HOH HOH A . C 2 HOH 27 36 36 HOH HOH A . C 2 HOH 28 37 37 HOH HOH A . C 2 HOH 29 39 39 HOH HOH A . C 2 HOH 30 40 40 HOH HOH A . C 2 HOH 31 41 41 HOH HOH A . C 2 HOH 32 42 42 HOH HOH A . C 2 HOH 33 43 43 HOH HOH A . C 2 HOH 34 46 46 HOH HOH A . C 2 HOH 35 47 47 HOH HOH A . C 2 HOH 36 48 48 HOH HOH A . C 2 HOH 37 51 51 HOH HOH A . C 2 HOH 38 52 52 HOH HOH A . C 2 HOH 39 53 53 HOH HOH A . C 2 HOH 40 54 54 HOH HOH A . C 2 HOH 41 56 56 HOH HOH A . C 2 HOH 42 57 57 HOH HOH A . C 2 HOH 43 58 58 HOH HOH A . C 2 HOH 44 59 59 HOH HOH A . C 2 HOH 45 60 60 HOH HOH A . C 2 HOH 46 61 61 HOH HOH A . C 2 HOH 47 64 64 HOH HOH A . C 2 HOH 48 65 65 HOH HOH A . C 2 HOH 49 69 69 HOH HOH A . C 2 HOH 50 71 71 HOH HOH A . C 2 HOH 51 73 73 HOH HOH A . C 2 HOH 52 74 74 HOH HOH A . C 2 HOH 53 75 75 HOH HOH A . C 2 HOH 54 77 77 HOH HOH A . C 2 HOH 55 79 79 HOH HOH A . C 2 HOH 56 81 81 HOH HOH A . C 2 HOH 57 82 82 HOH HOH A . C 2 HOH 58 84 84 HOH HOH A . C 2 HOH 59 85 85 HOH HOH A . C 2 HOH 60 86 86 HOH HOH A . C 2 HOH 61 87 87 HOH HOH A . C 2 HOH 62 88 88 HOH HOH A . C 2 HOH 63 93 93 HOH HOH A . C 2 HOH 64 96 96 HOH HOH A . C 2 HOH 65 98 98 HOH HOH A . C 2 HOH 66 99 99 HOH HOH A . C 2 HOH 67 100 100 HOH HOH A . C 2 HOH 68 102 102 HOH HOH A . C 2 HOH 69 107 107 HOH HOH A . C 2 HOH 70 109 109 HOH HOH A . C 2 HOH 71 110 110 HOH HOH A . C 2 HOH 72 114 114 HOH HOH A . C 2 HOH 73 115 115 HOH HOH A . C 2 HOH 74 116 116 HOH HOH A . C 2 HOH 75 117 117 HOH HOH A . C 2 HOH 76 118 118 HOH HOH A . C 2 HOH 77 121 121 HOH HOH A . C 2 HOH 78 122 122 HOH HOH A . C 2 HOH 79 124 124 HOH HOH A . C 2 HOH 80 125 125 HOH HOH A . C 2 HOH 81 127 127 HOH HOH A . C 2 HOH 82 128 128 HOH HOH A . C 2 HOH 83 129 129 HOH HOH A . C 2 HOH 84 130 130 HOH HOH A . C 2 HOH 85 131 131 HOH HOH A . C 2 HOH 86 135 135 HOH HOH A . C 2 HOH 87 136 136 HOH HOH A . C 2 HOH 88 137 137 HOH HOH A . C 2 HOH 89 139 139 HOH HOH A . C 2 HOH 90 141 141 HOH HOH A . C 2 HOH 91 145 145 HOH HOH A . C 2 HOH 92 147 147 HOH HOH A . C 2 HOH 93 152 152 HOH HOH A . C 2 HOH 94 239 153 HOH HOH A . C 2 HOH 95 240 154 HOH HOH A . C 2 HOH 96 241 157 HOH HOH A . C 2 HOH 97 242 159 HOH HOH A . C 2 HOH 98 243 162 HOH HOH A . C 2 HOH 99 244 244 HOH HOH A . C 2 HOH 100 245 245 HOH HOH A . C 2 HOH 101 246 164 HOH HOH A . C 2 HOH 102 247 167 HOH HOH A . C 2 HOH 103 248 248 HOH HOH A . C 2 HOH 104 249 249 HOH HOH A . C 2 HOH 105 250 250 HOH HOH A . C 2 HOH 106 251 251 HOH HOH A . C 2 HOH 107 252 168 HOH HOH A . C 2 HOH 108 253 253 HOH HOH A . C 2 HOH 109 254 172 HOH HOH A . C 2 HOH 110 255 255 HOH HOH A . C 2 HOH 111 256 176 HOH HOH A . C 2 HOH 112 257 178 HOH HOH A . C 2 HOH 113 258 258 HOH HOH A . C 2 HOH 114 259 179 HOH HOH A . C 2 HOH 115 260 180 HOH HOH A . C 2 HOH 116 261 261 HOH HOH A . C 2 HOH 117 262 181 HOH HOH A . C 2 HOH 118 263 183 HOH HOH A . C 2 HOH 119 264 184 HOH HOH A . C 2 HOH 120 265 185 HOH HOH A . C 2 HOH 121 266 187 HOH HOH A . C 2 HOH 122 267 188 HOH HOH A . C 2 HOH 123 268 268 HOH HOH A . C 2 HOH 124 269 189 HOH HOH A . C 2 HOH 125 270 190 HOH HOH A . C 2 HOH 126 271 194 HOH HOH A . C 2 HOH 127 272 196 HOH HOH A . C 2 HOH 128 273 197 HOH HOH A . C 2 HOH 129 274 274 HOH HOH A . C 2 HOH 130 275 275 HOH HOH A . C 2 HOH 131 276 276 HOH HOH A . C 2 HOH 132 277 199 HOH HOH A . C 2 HOH 133 278 278 HOH HOH A . C 2 HOH 134 279 279 HOH HOH A . C 2 HOH 135 280 200 HOH HOH A . C 2 HOH 136 281 201 HOH HOH A . C 2 HOH 137 282 203 HOH HOH A . C 2 HOH 138 283 208 HOH HOH A . C 2 HOH 139 284 216 HOH HOH A . C 2 HOH 140 285 218 HOH HOH A . C 2 HOH 141 286 221 HOH HOH A . C 2 HOH 142 287 224 HOH HOH A . C 2 HOH 143 288 227 HOH HOH A . C 2 HOH 144 289 234 HOH HOH A . C 2 HOH 145 290 237 HOH HOH A . D 2 HOH 1 2 2 HOH HOH B . D 2 HOH 2 7 7 HOH HOH B . D 2 HOH 3 9 9 HOH HOH B . D 2 HOH 4 16 16 HOH HOH B . D 2 HOH 5 22 22 HOH HOH B . D 2 HOH 6 23 23 HOH HOH B . D 2 HOH 7 26 26 HOH HOH B . D 2 HOH 8 28 28 HOH HOH B . D 2 HOH 9 31 31 HOH HOH B . D 2 HOH 10 38 38 HOH HOH B . D 2 HOH 11 44 44 HOH HOH B . D 2 HOH 12 45 45 HOH HOH B . D 2 HOH 13 49 49 HOH HOH B . D 2 HOH 14 50 50 HOH HOH B . D 2 HOH 15 55 55 HOH HOH B . D 2 HOH 16 62 62 HOH HOH B . D 2 HOH 17 66 66 HOH HOH B . D 2 HOH 18 67 67 HOH HOH B . D 2 HOH 19 68 68 HOH HOH B . D 2 HOH 20 70 70 HOH HOH B . D 2 HOH 21 72 72 HOH HOH B . D 2 HOH 22 76 76 HOH HOH B . D 2 HOH 23 78 78 HOH HOH B . D 2 HOH 24 80 80 HOH HOH B . D 2 HOH 25 83 83 HOH HOH B . D 2 HOH 26 89 89 HOH HOH B . D 2 HOH 27 90 90 HOH HOH B . D 2 HOH 28 91 91 HOH HOH B . D 2 HOH 29 92 92 HOH HOH B . D 2 HOH 30 94 94 HOH HOH B . D 2 HOH 31 95 95 HOH HOH B . D 2 HOH 32 97 97 HOH HOH B . D 2 HOH 33 101 101 HOH HOH B . D 2 HOH 34 103 103 HOH HOH B . D 2 HOH 35 104 104 HOH HOH B . D 2 HOH 36 105 105 HOH HOH B . D 2 HOH 37 106 106 HOH HOH B . D 2 HOH 38 108 108 HOH HOH B . D 2 HOH 39 111 111 HOH HOH B . D 2 HOH 40 112 112 HOH HOH B . D 2 HOH 41 113 113 HOH HOH B . D 2 HOH 42 119 119 HOH HOH B . D 2 HOH 43 120 120 HOH HOH B . D 2 HOH 44 123 123 HOH HOH B . D 2 HOH 45 126 126 HOH HOH B . D 2 HOH 46 132 132 HOH HOH B . D 2 HOH 47 133 133 HOH HOH B . D 2 HOH 48 134 134 HOH HOH B . D 2 HOH 49 140 140 HOH HOH B . D 2 HOH 50 142 142 HOH HOH B . D 2 HOH 51 143 143 HOH HOH B . D 2 HOH 52 144 144 HOH HOH B . D 2 HOH 53 146 146 HOH HOH B . D 2 HOH 54 148 148 HOH HOH B . D 2 HOH 55 149 149 HOH HOH B . D 2 HOH 56 150 150 HOH HOH B . D 2 HOH 57 151 151 HOH HOH B . D 2 HOH 58 239 239 HOH HOH B . D 2 HOH 59 240 240 HOH HOH B . D 2 HOH 60 241 241 HOH HOH B . D 2 HOH 61 242 156 HOH HOH B . D 2 HOH 62 243 243 HOH HOH B . D 2 HOH 63 244 158 HOH HOH B . D 2 HOH 64 245 160 HOH HOH B . D 2 HOH 65 246 161 HOH HOH B . D 2 HOH 66 247 163 HOH HOH B . D 2 HOH 67 248 165 HOH HOH B . D 2 HOH 68 249 169 HOH HOH B . D 2 HOH 69 250 170 HOH HOH B . D 2 HOH 70 251 173 HOH HOH B . D 2 HOH 71 252 175 HOH HOH B . D 2 HOH 72 253 182 HOH HOH B . D 2 HOH 73 254 254 HOH HOH B . D 2 HOH 74 255 193 HOH HOH B . D 2 HOH 75 256 195 HOH HOH B . D 2 HOH 76 257 198 HOH HOH B . D 2 HOH 77 258 202 HOH HOH B . D 2 HOH 78 259 204 HOH HOH B . D 2 HOH 79 260 260 HOH HOH B . D 2 HOH 80 261 205 HOH HOH B . D 2 HOH 81 262 206 HOH HOH B . D 2 HOH 82 263 263 HOH HOH B . D 2 HOH 83 264 207 HOH HOH B . D 2 HOH 84 265 265 HOH HOH B . D 2 HOH 85 266 209 HOH HOH B . D 2 HOH 86 267 267 HOH HOH B . D 2 HOH 87 268 214 HOH HOH B . D 2 HOH 88 269 269 HOH HOH B . D 2 HOH 89 270 270 HOH HOH B . D 2 HOH 90 271 271 HOH HOH B . D 2 HOH 91 272 219 HOH HOH B . D 2 HOH 92 273 223 HOH HOH B . D 2 HOH 93 274 225 HOH HOH B . D 2 HOH 94 275 228 HOH HOH B . D 2 HOH 95 276 229 HOH HOH B . D 2 HOH 96 277 231 HOH HOH B . D 2 HOH 97 278 233 HOH HOH B . D 2 HOH 98 279 236 HOH HOH B . D 2 HOH 99 280 280 HOH HOH B . D 2 HOH 100 281 281 HOH HOH B . D 2 HOH 101 282 282 HOH HOH B . D 2 HOH 102 283 283 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 153 ? CG ? A GLU 1 CG 2 1 Y 0 A GLU 153 ? CD ? A GLU 1 CD 3 1 Y 0 A GLU 153 ? OE1 ? A GLU 1 OE1 4 1 Y 0 A GLU 153 ? OE2 ? A GLU 1 OE2 5 1 Y 0 B ASP 162 ? CG ? B ASP 10 CG 6 1 Y 0 B ASP 162 ? OD1 ? B ASP 10 OD1 7 1 Y 0 B ASP 162 ? OD2 ? B ASP 10 OD2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 PHENIX 1.6.4_486 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? # _cell.length_a 40.150 _cell.length_b 54.460 _cell.length_c 44.090 _cell.angle_alpha 90.000 _cell.angle_beta 109.750 _cell.angle_gamma 90.000 _cell.entry_id 3SWK _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3SWK _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3SWK _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 43.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details ;protein in 10 mM Tris pH 8, 38 mM NaCl + PEG 3350 25% w/v, 0.2M ammonium acetate, BIS-TRIS 0.1M pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-11-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97895 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.pdbx_wavelength_list 0.97895 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SOLEIL _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' # _reflns.entry_id 3SWK _reflns.d_resolution_high 1.700 _reflns.number_obs 36328 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_netI_over_sigmaI 13.260 _reflns.percent_possible_obs 98.9 _reflns.B_iso_Wilson_estimate 30.574 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F -6 _reflns.d_resolution_low 34.3 _reflns.number_all 38296 _reflns.pdbx_Rsym_value 0.068 _reflns.pdbx_redundancy 4.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.700 1.800 27144 ? 5840 ? 2.590 0.778 ? 4.64 ? ? 96.100 1 1 1.800 1.930 30665 ? 6148 ? 4.230 0.482 ? ? ? ? 99.500 2 1 1.930 2.080 26514 ? 5302 ? 7.360 0.239 ? ? ? ? 99.800 3 1 2.080 2.280 25358 ? 5068 ? 11.870 0.127 ? ? ? ? 99.700 4 1 2.280 2.550 22926 ? 4585 ? 16.100 0.082 ? ? ? ? 99.900 5 1 2.550 2.940 19633 ? 3974 ? 20.530 0.060 ? ? ? ? 99.500 6 1 2.940 3.290 10200 ? 2129 ? 24.100 0.048 ? ? ? ? 100.000 7 1 3.290 5.060 17960 ? 3846 ? 29.970 0.040 ? ? ? ? 98.900 8 1 5.060 34.3 6635 ? 1428 ? 32.060 0.034 ? ? ? ? 96.300 9 1 # _refine.entry_id 3SWK _refine.ls_d_res_high 1.7000 _refine.ls_d_res_low 34.2990 _refine.pdbx_ls_sigma_F 1.990 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.0800 _refine.ls_number_reflns_obs 36328 _refine.ls_number_reflns_all 38296 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2335 _refine.ls_R_factor_R_work 0.2315 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2723 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1400 _refine.ls_number_reflns_R_free 1968 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 38.8169 _refine.solvent_model_param_bsol 48.9080 _refine.solvent_model_param_ksol 0.3660 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -4.1576 _refine.aniso_B[2][2] -1.8160 _refine.aniso_B[3][3] 5.9737 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 12.0176 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2700 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 0.9000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.7700 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 169.910 _refine.B_iso_min 13.160 _refine.pdbx_overall_phase_error 30.4400 _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1440 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 247 _refine_hist.number_atoms_total 1687 _refine_hist.d_res_high 1.7000 _refine_hist.d_res_low 34.2990 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1443 0.004 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1923 0.644 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 215 0.041 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 262 0.002 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 603 13.875 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.7002 1.7610 10 94.0000 3429 . 0.3706 0.4337 . 191 . 3620 . . 'X-RAY DIFFRACTION' 1.7610 1.8315 10 100.0000 3678 . 0.3176 0.3973 . 206 . 3884 . . 'X-RAY DIFFRACTION' 1.8315 1.9149 10 100.0000 3643 . 0.2923 0.3201 . 207 . 3850 . . 'X-RAY DIFFRACTION' 1.9149 2.0158 10 100.0000 3687 . 0.2773 0.3160 . 168 . 3855 . . 'X-RAY DIFFRACTION' 2.0158 2.1421 10 100.0000 3637 . 0.2484 0.2791 . 206 . 3843 . . 'X-RAY DIFFRACTION' 2.1421 2.3074 10 100.0000 3676 . 0.2235 0.2427 . 188 . 3864 . . 'X-RAY DIFFRACTION' 2.3074 2.5396 10 100.0000 3628 . 0.2376 0.2788 . 223 . 3851 . . 'X-RAY DIFFRACTION' 2.5396 2.9069 10 100.0000 3645 . 0.2296 0.2731 . 216 . 3861 . . 'X-RAY DIFFRACTION' 2.9069 3.6617 10 100.0000 3674 . 0.2063 0.2479 . 206 . 3880 . . 'X-RAY DIFFRACTION' 3.6617 34.3058 10 98.0000 3631 . 0.2024 0.2348 . 157 . 3788 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3SWK _struct.title 'Crystal structure of vimentin coil1B fragment' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SWK _struct_keywords.text 'cytoskeleton, intermediate filament, alpha-helix, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VIME_HUMAN _struct_ref.pdbx_db_accession P08670 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIA FLKKLH ; _struct_ref.pdbx_align_begin 153 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3SWK A 1 ? 86 ? P08670 153 ? 238 ? 153 238 2 1 3SWK B 1 ? 86 ? P08670 153 ? 238 ? 153 238 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4400 ? 1 MORE -48 ? 1 'SSA (A^2)' 13280 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 2 ? GLN A 56 ? MET A 154 GLN A 208 1 ? 55 HELX_P HELX_P2 2 ASP A 57 ? LYS A 83 ? ASP A 209 LYS A 235 1 ? 27 HELX_P HELX_P3 3 GLU B 1 ? LEU B 85 ? GLU B 153 LEU B 237 1 ? 85 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.700 _diffrn_reflns.pdbx_d_res_low ? _diffrn_reflns.pdbx_number_obs 38320 _diffrn_reflns.pdbx_Rmerge_I_obs 0.068 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI ? _diffrn_reflns.pdbx_redundancy ? _diffrn_reflns.pdbx_percent_possible_obs 98.90 _diffrn_reflns.number 187035 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.06 34.3 1428 ? 0.034 ? ? ? 96.30 1 3.29 5.06 3846 ? 0.040 ? ? ? 98.90 1 2.94 3.29 2129 ? 0.048 ? ? ? 100.00 1 2.55 2.94 3974 ? 0.060 ? ? ? 99.50 1 2.28 2.55 4585 ? 0.082 ? ? ? 99.90 1 2.08 2.28 5068 ? 0.127 ? ? ? 99.70 1 1.93 2.08 5302 ? 0.239 ? ? ? 99.80 1 1.80 1.93 6148 ? 0.482 ? ? ? 99.50 1 1.70 1.80 5840 ? 0.778 ? ? ? 96.10 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 47.0928 26.5643 21.0420 0.1008 0.1021 0.1024 -0.0032 -0.0060 0.0243 0.0701 -0.0505 0.0827 0.1095 0.0599 0.0001 0.0939 -0.0805 0.0000 -0.0523 -0.1030 -0.0148 0.0823 -0.1237 0.0698 'X-RAY DIFFRACTION' 2 ? refined -9.6001 6.2751 47.8910 0.1097 0.1001 0.1250 -0.0391 0.0240 -0.0259 0.0047 0.0008 0.0187 0.0110 -0.0025 0.0114 -0.2060 -0.0066 -0.0000 0.0443 -0.0574 -0.1202 0.1082 -0.1347 -0.0770 'X-RAY DIFFRACTION' 3 ? refined -26.0220 6.2339 55.8823 0.1550 0.1275 0.3261 -0.0447 0.0986 -0.0310 0.0009 0.0042 -0.0010 0.0014 -0.0138 -0.0076 -0.0777 0.0913 0.0000 0.1003 0.1210 0.1161 0.1555 0.0721 0.2263 'X-RAY DIFFRACTION' 4 ? refined 73.1532 28.2833 8.0838 0.3183 0.2259 0.7939 0.0658 0.2077 0.2097 0.0021 -0.0181 -0.0106 -0.0138 -0.0098 0.0039 -0.0410 -0.0814 0.0000 -0.0304 -0.0352 -0.1708 0.1611 0.0835 0.0271 'X-RAY DIFFRACTION' 5 ? refined 35.2027 22.2197 20.9355 0.0721 0.1541 0.1105 0.0057 -0.0244 0.0340 -0.0799 0.3624 -0.1457 0.1399 -0.2829 0.0760 -0.0007 -0.0179 -0.0000 0.1833 -0.1495 -0.0346 0.0014 -0.0872 -0.1220 'X-RAY DIFFRACTION' 6 ? refined 0.8347 15.9171 47.4238 0.1309 0.0922 0.0922 -0.0314 -0.0082 -0.0165 -0.0047 0.0262 -0.0204 -0.0265 -0.0523 0.0407 0.1662 -0.0880 -0.0000 -0.0378 0.1980 -0.1198 -0.0382 0.1343 -0.0138 'X-RAY DIFFRACTION' 7 ? refined -17.3010 10.6052 61.2482 0.2706 0.1432 0.0401 -0.1286 0.0888 -0.0973 0.0193 -0.0076 0.0189 -0.0130 0.0115 -0.0146 -0.0368 -0.2303 0.0000 0.0348 0.0606 0.0548 0.0965 -0.0185 0.0203 'X-RAY DIFFRACTION' 8 ? refined 9.2377 5.9650 41.3922 0.1696 0.1532 0.3337 -0.0383 0.0473 0.0342 -0.0040 0.0172 0.0211 -0.0077 0.0033 0.0015 -0.1416 0.0081 0.0000 -0.2852 -0.2055 0.0951 -0.1601 -0.2282 -0.0586 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 153 A 204 '(chain A and resid 153:204)' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 216 A 229 '(chain A and resid 216:229)' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 230 A 238 '(chain A and resid 230:238)' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 153 B 165 '(chain B and resid 153:165)' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 166 B 206 '(chain B and resid 166:206)' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 207 B 224 '(chain B and resid 207:224)' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 225 B 237 '(chain B and resid 225:237)' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 205 A 215 '(chain A and resid 205:215)' ? ? ? ? ? # _phasing.method SAD # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id HIS _pdbx_unobs_or_zero_occ_residues.auth_seq_id 238 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id HIS _pdbx_unobs_or_zero_occ_residues.label_seq_id 86 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 HIS N N N N 113 HIS CA C N S 114 HIS C C N N 115 HIS O O N N 116 HIS CB C N N 117 HIS CG C Y N 118 HIS ND1 N Y N 119 HIS CD2 C Y N 120 HIS CE1 C Y N 121 HIS NE2 N Y N 122 HIS OXT O N N 123 HIS H H N N 124 HIS H2 H N N 125 HIS HA H N N 126 HIS HB2 H N N 127 HIS HB3 H N N 128 HIS HD1 H N N 129 HIS HD2 H N N 130 HIS HE1 H N N 131 HIS HE2 H N N 132 HIS HXT H N N 133 HOH O O N N 134 HOH H1 H N N 135 HOH H2 H N N 136 ILE N N N N 137 ILE CA C N S 138 ILE C C N N 139 ILE O O N N 140 ILE CB C N S 141 ILE CG1 C N N 142 ILE CG2 C N N 143 ILE CD1 C N N 144 ILE OXT O N N 145 ILE H H N N 146 ILE H2 H N N 147 ILE HA H N N 148 ILE HB H N N 149 ILE HG12 H N N 150 ILE HG13 H N N 151 ILE HG21 H N N 152 ILE HG22 H N N 153 ILE HG23 H N N 154 ILE HD11 H N N 155 ILE HD12 H N N 156 ILE HD13 H N N 157 ILE HXT H N N 158 LEU N N N N 159 LEU CA C N S 160 LEU C C N N 161 LEU O O N N 162 LEU CB C N N 163 LEU CG C N N 164 LEU CD1 C N N 165 LEU CD2 C N N 166 LEU OXT O N N 167 LEU H H N N 168 LEU H2 H N N 169 LEU HA H N N 170 LEU HB2 H N N 171 LEU HB3 H N N 172 LEU HG H N N 173 LEU HD11 H N N 174 LEU HD12 H N N 175 LEU HD13 H N N 176 LEU HD21 H N N 177 LEU HD22 H N N 178 LEU HD23 H N N 179 LEU HXT H N N 180 LYS N N N N 181 LYS CA C N S 182 LYS C C N N 183 LYS O O N N 184 LYS CB C N N 185 LYS CG C N N 186 LYS CD C N N 187 LYS CE C N N 188 LYS NZ N N N 189 LYS OXT O N N 190 LYS H H N N 191 LYS H2 H N N 192 LYS HA H N N 193 LYS HB2 H N N 194 LYS HB3 H N N 195 LYS HG2 H N N 196 LYS HG3 H N N 197 LYS HD2 H N N 198 LYS HD3 H N N 199 LYS HE2 H N N 200 LYS HE3 H N N 201 LYS HZ1 H N N 202 LYS HZ2 H N N 203 LYS HZ3 H N N 204 LYS HXT H N N 205 MET N N N N 206 MET CA C N S 207 MET C C N N 208 MET O O N N 209 MET CB C N N 210 MET CG C N N 211 MET SD S N N 212 MET CE C N N 213 MET OXT O N N 214 MET H H N N 215 MET H2 H N N 216 MET HA H N N 217 MET HB2 H N N 218 MET HB3 H N N 219 MET HG2 H N N 220 MET HG3 H N N 221 MET HE1 H N N 222 MET HE2 H N N 223 MET HE3 H N N 224 MET HXT H N N 225 PHE N N N N 226 PHE CA C N S 227 PHE C C N N 228 PHE O O N N 229 PHE CB C N N 230 PHE CG C Y N 231 PHE CD1 C Y N 232 PHE CD2 C Y N 233 PHE CE1 C Y N 234 PHE CE2 C Y N 235 PHE CZ C Y N 236 PHE OXT O N N 237 PHE H H N N 238 PHE H2 H N N 239 PHE HA H N N 240 PHE HB2 H N N 241 PHE HB3 H N N 242 PHE HD1 H N N 243 PHE HD2 H N N 244 PHE HE1 H N N 245 PHE HE2 H N N 246 PHE HZ H N N 247 PHE HXT H N N 248 SER N N N N 249 SER CA C N S 250 SER C C N N 251 SER O O N N 252 SER CB C N N 253 SER OG O N N 254 SER OXT O N N 255 SER H H N N 256 SER H2 H N N 257 SER HA H N N 258 SER HB2 H N N 259 SER HB3 H N N 260 SER HG H N N 261 SER HXT H N N 262 THR N N N N 263 THR CA C N S 264 THR C C N N 265 THR O O N N 266 THR CB C N R 267 THR OG1 O N N 268 THR CG2 C N N 269 THR OXT O N N 270 THR H H N N 271 THR H2 H N N 272 THR HA H N N 273 THR HB H N N 274 THR HG1 H N N 275 THR HG21 H N N 276 THR HG22 H N N 277 THR HG23 H N N 278 THR HXT H N N 279 VAL N N N N 280 VAL CA C N S 281 VAL C C N N 282 VAL O O N N 283 VAL CB C N N 284 VAL CG1 C N N 285 VAL CG2 C N N 286 VAL OXT O N N 287 VAL H H N N 288 VAL H2 H N N 289 VAL HA H N N 290 VAL HB H N N 291 VAL HG11 H N N 292 VAL HG12 H N N 293 VAL HG13 H N N 294 VAL HG21 H N N 295 VAL HG22 H N N 296 VAL HG23 H N N 297 VAL HXT H N N 298 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 HIS N CA sing N N 107 HIS N H sing N N 108 HIS N H2 sing N N 109 HIS CA C sing N N 110 HIS CA CB sing N N 111 HIS CA HA sing N N 112 HIS C O doub N N 113 HIS C OXT sing N N 114 HIS CB CG sing N N 115 HIS CB HB2 sing N N 116 HIS CB HB3 sing N N 117 HIS CG ND1 sing Y N 118 HIS CG CD2 doub Y N 119 HIS ND1 CE1 doub Y N 120 HIS ND1 HD1 sing N N 121 HIS CD2 NE2 sing Y N 122 HIS CD2 HD2 sing N N 123 HIS CE1 NE2 sing Y N 124 HIS CE1 HE1 sing N N 125 HIS NE2 HE2 sing N N 126 HIS OXT HXT sing N N 127 HOH O H1 sing N N 128 HOH O H2 sing N N 129 ILE N CA sing N N 130 ILE N H sing N N 131 ILE N H2 sing N N 132 ILE CA C sing N N 133 ILE CA CB sing N N 134 ILE CA HA sing N N 135 ILE C O doub N N 136 ILE C OXT sing N N 137 ILE CB CG1 sing N N 138 ILE CB CG2 sing N N 139 ILE CB HB sing N N 140 ILE CG1 CD1 sing N N 141 ILE CG1 HG12 sing N N 142 ILE CG1 HG13 sing N N 143 ILE CG2 HG21 sing N N 144 ILE CG2 HG22 sing N N 145 ILE CG2 HG23 sing N N 146 ILE CD1 HD11 sing N N 147 ILE CD1 HD12 sing N N 148 ILE CD1 HD13 sing N N 149 ILE OXT HXT sing N N 150 LEU N CA sing N N 151 LEU N H sing N N 152 LEU N H2 sing N N 153 LEU CA C sing N N 154 LEU CA CB sing N N 155 LEU CA HA sing N N 156 LEU C O doub N N 157 LEU C OXT sing N N 158 LEU CB CG sing N N 159 LEU CB HB2 sing N N 160 LEU CB HB3 sing N N 161 LEU CG CD1 sing N N 162 LEU CG CD2 sing N N 163 LEU CG HG sing N N 164 LEU CD1 HD11 sing N N 165 LEU CD1 HD12 sing N N 166 LEU CD1 HD13 sing N N 167 LEU CD2 HD21 sing N N 168 LEU CD2 HD22 sing N N 169 LEU CD2 HD23 sing N N 170 LEU OXT HXT sing N N 171 LYS N CA sing N N 172 LYS N H sing N N 173 LYS N H2 sing N N 174 LYS CA C sing N N 175 LYS CA CB sing N N 176 LYS CA HA sing N N 177 LYS C O doub N N 178 LYS C OXT sing N N 179 LYS CB CG sing N N 180 LYS CB HB2 sing N N 181 LYS CB HB3 sing N N 182 LYS CG CD sing N N 183 LYS CG HG2 sing N N 184 LYS CG HG3 sing N N 185 LYS CD CE sing N N 186 LYS CD HD2 sing N N 187 LYS CD HD3 sing N N 188 LYS CE NZ sing N N 189 LYS CE HE2 sing N N 190 LYS CE HE3 sing N N 191 LYS NZ HZ1 sing N N 192 LYS NZ HZ2 sing N N 193 LYS NZ HZ3 sing N N 194 LYS OXT HXT sing N N 195 MET N CA sing N N 196 MET N H sing N N 197 MET N H2 sing N N 198 MET CA C sing N N 199 MET CA CB sing N N 200 MET CA HA sing N N 201 MET C O doub N N 202 MET C OXT sing N N 203 MET CB CG sing N N 204 MET CB HB2 sing N N 205 MET CB HB3 sing N N 206 MET CG SD sing N N 207 MET CG HG2 sing N N 208 MET CG HG3 sing N N 209 MET SD CE sing N N 210 MET CE HE1 sing N N 211 MET CE HE2 sing N N 212 MET CE HE3 sing N N 213 MET OXT HXT sing N N 214 PHE N CA sing N N 215 PHE N H sing N N 216 PHE N H2 sing N N 217 PHE CA C sing N N 218 PHE CA CB sing N N 219 PHE CA HA sing N N 220 PHE C O doub N N 221 PHE C OXT sing N N 222 PHE CB CG sing N N 223 PHE CB HB2 sing N N 224 PHE CB HB3 sing N N 225 PHE CG CD1 doub Y N 226 PHE CG CD2 sing Y N 227 PHE CD1 CE1 sing Y N 228 PHE CD1 HD1 sing N N 229 PHE CD2 CE2 doub Y N 230 PHE CD2 HD2 sing N N 231 PHE CE1 CZ doub Y N 232 PHE CE1 HE1 sing N N 233 PHE CE2 CZ sing Y N 234 PHE CE2 HE2 sing N N 235 PHE CZ HZ sing N N 236 PHE OXT HXT sing N N 237 SER N CA sing N N 238 SER N H sing N N 239 SER N H2 sing N N 240 SER CA C sing N N 241 SER CA CB sing N N 242 SER CA HA sing N N 243 SER C O doub N N 244 SER C OXT sing N N 245 SER CB OG sing N N 246 SER CB HB2 sing N N 247 SER CB HB3 sing N N 248 SER OG HG sing N N 249 SER OXT HXT sing N N 250 THR N CA sing N N 251 THR N H sing N N 252 THR N H2 sing N N 253 THR CA C sing N N 254 THR CA CB sing N N 255 THR CA HA sing N N 256 THR C O doub N N 257 THR C OXT sing N N 258 THR CB OG1 sing N N 259 THR CB CG2 sing N N 260 THR CB HB sing N N 261 THR OG1 HG1 sing N N 262 THR CG2 HG21 sing N N 263 THR CG2 HG22 sing N N 264 THR CG2 HG23 sing N N 265 THR OXT HXT sing N N 266 VAL N CA sing N N 267 VAL N H sing N N 268 VAL N H2 sing N N 269 VAL CA C sing N N 270 VAL CA CB sing N N 271 VAL CA HA sing N N 272 VAL C O doub N N 273 VAL C OXT sing N N 274 VAL CB CG1 sing N N 275 VAL CB CG2 sing N N 276 VAL CB HB sing N N 277 VAL CG1 HG11 sing N N 278 VAL CG1 HG12 sing N N 279 VAL CG1 HG13 sing N N 280 VAL CG2 HG21 sing N N 281 VAL CG2 HG22 sing N N 282 VAL CG2 HG23 sing N N 283 VAL OXT HXT sing N N 284 # _atom_sites.entry_id 3SWK _atom_sites.fract_transf_matrix[1][1] 0.024907 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008942 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018362 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024098 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N O S # loop_