data_3TFV # _entry.id 3TFV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3TFV pdb_00003tfv 10.2210/pdb3tfv/pdb RCSB RCSB067430 ? ? WWPDB D_1000067430 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3TFP . unspecified PDB 3TFN . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3TFV _pdbx_database_status.recvd_initial_deposition_date 2011-08-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lin, F.-Y.' 1 'Zhang, Y.' 2 'Liu, Y.-L.' 3 'Oldfield, E.' 4 # _citation.id primary _citation.title 'Dual dehydrosqualene/squalene synthase inhibitors: leads for innate immune system-based therapeutics.' _citation.journal_abbrev Chemmedchem _citation.journal_volume 7 _citation.page_first 561 _citation.page_last 564 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country DE _citation.journal_id_ISSN 1860-7179 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22290830 _citation.pdbx_database_id_DOI 10.1002/cmdc.201100589 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lin, F.Y.' 1 ? primary 'Zhang, Y.' 2 ? primary 'Hensler, M.' 3 ? primary 'Liu, Y.L.' 4 ? primary 'Chow, O.A.' 5 ? primary 'Zhu, W.' 6 ? primary 'Wang, K.' 7 ? primary 'Pang, R.' 8 ? primary 'Thienphrapa, W.' 9 ? primary 'Nizet, V.' 10 ? primary 'Oldfield, E.' 11 ? # _cell.entry_id 3TFV _cell.length_a 80.999 _cell.length_b 80.999 _cell.length_c 90.737 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3TFV _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dehydrosqualene synthase' 34787.496 1 2.5.1.- ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn '5-bromo-2-{[3-(octyloxy)benzyl]sulfanyl}benzoic acid' 451.417 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;4,4'-diapophytoene synthase, DAP synthase, Diapophytoene synthase ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AAAAAAMTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYP YEYHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTY DVARRLGESLQLINILRDVGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS IEAQPIIELAARIYIEILDEVRQANYTLHERVFVEKRKKAKLFHEINSKYHRI ; _entity_poly.pdbx_seq_one_letter_code_can ;AAAAAAMTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYP YEYHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTY DVARRLGESLQLINILRDVGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFS IEAQPIIELAARIYIEILDEVRQANYTLHERVFVEKRKKAKLFHEINSKYHRI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 ALA n 1 4 ALA n 1 5 ALA n 1 6 ALA n 1 7 MET n 1 8 THR n 1 9 MET n 1 10 MET n 1 11 ASP n 1 12 MET n 1 13 ASN n 1 14 PHE n 1 15 LYS n 1 16 TYR n 1 17 CYS n 1 18 HIS n 1 19 LYS n 1 20 ILE n 1 21 MET n 1 22 LYS n 1 23 LYS n 1 24 HIS n 1 25 SER n 1 26 LYS n 1 27 SER n 1 28 PHE n 1 29 SER n 1 30 TYR n 1 31 ALA n 1 32 PHE n 1 33 ASP n 1 34 LEU n 1 35 LEU n 1 36 PRO n 1 37 GLU n 1 38 ASP n 1 39 GLN n 1 40 ARG n 1 41 LYS n 1 42 ALA n 1 43 VAL n 1 44 TRP n 1 45 ALA n 1 46 ILE n 1 47 TYR n 1 48 ALA n 1 49 VAL n 1 50 CYS n 1 51 ARG n 1 52 LYS n 1 53 ILE n 1 54 ASP n 1 55 ASP n 1 56 SER n 1 57 ILE n 1 58 ASP n 1 59 VAL n 1 60 TYR n 1 61 GLY n 1 62 ASP n 1 63 ILE n 1 64 GLN n 1 65 PHE n 1 66 LEU n 1 67 ASN n 1 68 GLN n 1 69 ILE n 1 70 LYS n 1 71 GLU n 1 72 ASP n 1 73 ILE n 1 74 GLN n 1 75 SER n 1 76 ILE n 1 77 GLU n 1 78 LYS n 1 79 TYR n 1 80 PRO n 1 81 TYR n 1 82 GLU n 1 83 TYR n 1 84 HIS n 1 85 HIS n 1 86 PHE n 1 87 GLN n 1 88 SER n 1 89 ASP n 1 90 ARG n 1 91 ARG n 1 92 ILE n 1 93 MET n 1 94 MET n 1 95 ALA n 1 96 LEU n 1 97 GLN n 1 98 HIS n 1 99 VAL n 1 100 ALA n 1 101 GLN n 1 102 HIS n 1 103 LYS n 1 104 ASN n 1 105 ILE n 1 106 ALA n 1 107 PHE n 1 108 GLN n 1 109 SER n 1 110 PHE n 1 111 TYR n 1 112 ASN n 1 113 LEU n 1 114 ILE n 1 115 ASP n 1 116 THR n 1 117 VAL n 1 118 TYR n 1 119 LYS n 1 120 ASP n 1 121 GLN n 1 122 HIS n 1 123 PHE n 1 124 THR n 1 125 MET n 1 126 PHE n 1 127 GLU n 1 128 THR n 1 129 ASP n 1 130 ALA n 1 131 GLU n 1 132 LEU n 1 133 PHE n 1 134 GLY n 1 135 TYR n 1 136 CYS n 1 137 TYR n 1 138 GLY n 1 139 VAL n 1 140 ALA n 1 141 GLY n 1 142 THR n 1 143 VAL n 1 144 GLY n 1 145 GLU n 1 146 VAL n 1 147 LEU n 1 148 THR n 1 149 PRO n 1 150 ILE n 1 151 LEU n 1 152 SER n 1 153 ASP n 1 154 HIS n 1 155 GLU n 1 156 THR n 1 157 HIS n 1 158 GLN n 1 159 THR n 1 160 TYR n 1 161 ASP n 1 162 VAL n 1 163 ALA n 1 164 ARG n 1 165 ARG n 1 166 LEU n 1 167 GLY n 1 168 GLU n 1 169 SER n 1 170 LEU n 1 171 GLN n 1 172 LEU n 1 173 ILE n 1 174 ASN n 1 175 ILE n 1 176 LEU n 1 177 ARG n 1 178 ASP n 1 179 VAL n 1 180 GLY n 1 181 GLU n 1 182 ASP n 1 183 PHE n 1 184 GLU n 1 185 ASN n 1 186 GLU n 1 187 ARG n 1 188 ILE n 1 189 TYR n 1 190 PHE n 1 191 SER n 1 192 LYS n 1 193 GLN n 1 194 ARG n 1 195 LEU n 1 196 LYS n 1 197 GLN n 1 198 TYR n 1 199 GLU n 1 200 VAL n 1 201 ASP n 1 202 ILE n 1 203 ALA n 1 204 GLU n 1 205 VAL n 1 206 TYR n 1 207 GLN n 1 208 ASN n 1 209 GLY n 1 210 VAL n 1 211 ASN n 1 212 ASN n 1 213 HIS n 1 214 TYR n 1 215 ILE n 1 216 ASP n 1 217 LEU n 1 218 TRP n 1 219 GLU n 1 220 TYR n 1 221 TYR n 1 222 ALA n 1 223 ALA n 1 224 ILE n 1 225 ALA n 1 226 GLU n 1 227 LYS n 1 228 ASP n 1 229 PHE n 1 230 ARG n 1 231 ASP n 1 232 VAL n 1 233 MET n 1 234 ASP n 1 235 GLN n 1 236 ILE n 1 237 LYS n 1 238 VAL n 1 239 PHE n 1 240 SER n 1 241 ILE n 1 242 GLU n 1 243 ALA n 1 244 GLN n 1 245 PRO n 1 246 ILE n 1 247 ILE n 1 248 GLU n 1 249 LEU n 1 250 ALA n 1 251 ALA n 1 252 ARG n 1 253 ILE n 1 254 TYR n 1 255 ILE n 1 256 GLU n 1 257 ILE n 1 258 LEU n 1 259 ASP n 1 260 GLU n 1 261 VAL n 1 262 ARG n 1 263 GLN n 1 264 ALA n 1 265 ASN n 1 266 TYR n 1 267 THR n 1 268 LEU n 1 269 HIS n 1 270 GLU n 1 271 ARG n 1 272 VAL n 1 273 PHE n 1 274 VAL n 1 275 GLU n 1 276 LYS n 1 277 ARG n 1 278 LYS n 1 279 LYS n 1 280 ALA n 1 281 LYS n 1 282 LEU n 1 283 PHE n 1 284 HIS n 1 285 GLU n 1 286 ILE n 1 287 ASN n 1 288 SER n 1 289 LYS n 1 290 TYR n 1 291 HIS n 1 292 ARG n 1 293 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene crtM _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CRTM_STAAU _struct_ref.pdbx_db_accession A9JQL9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEYHHF QSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRL GESLQLINILRDVGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPI IELAARIYIEILDEVRQANYTLHERVFVEKRKKAKLFHEINSKYHRI ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3TFV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 7 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 293 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A9JQL9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 287 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 287 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3TFV ALA A 1 ? UNP A9JQL9 ? ? 'expression tag' -5 1 1 3TFV ALA A 2 ? UNP A9JQL9 ? ? 'expression tag' -4 2 1 3TFV ALA A 3 ? UNP A9JQL9 ? ? 'expression tag' -3 3 1 3TFV ALA A 4 ? UNP A9JQL9 ? ? 'expression tag' -2 4 1 3TFV ALA A 5 ? UNP A9JQL9 ? ? 'expression tag' -1 5 1 3TFV ALA A 6 ? UNP A9JQL9 ? ? 'expression tag' 0 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2CN non-polymer . '5-bromo-2-{[3-(octyloxy)benzyl]sulfanyl}benzoic acid' ? 'C22 H27 Br O3 S' 451.417 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3TFV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_percent_sol 50.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_details '0.2M Potassium sodium tartrate, 20% w/v PEG 3350, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-07-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_wavelength 0.9 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3TFV _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 3.000 _reflns.number_obs 7190 _reflns.number_all ? _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.400 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3TFV _refine.ls_number_reflns_obs 6800 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 99.1 _refine.ls_R_factor_obs 0.212 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.290 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.700 _refine.ls_number_reflns_R_free 334 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.933 _refine.correlation_coeff_Fo_to_Fc_free 0.869 _refine.B_iso_mean 54.99 _refine.aniso_B[1][1] 2.08000 _refine.aniso_B[2][2] 2.08000 _refine.aniso_B[3][3] -3.12000 _refine.aniso_B[1][2] 1.04000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3NPR' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.529 _refine.overall_SU_ML 0.373 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 19.921 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2392 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2420 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.013 0.022 ? 2476 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.372 1.942 ? 3336 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.988 5.000 ? 283 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 36.488 24.275 ? 138 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 19.666 15.000 ? 443 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20.345 15.000 ? 14 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.100 0.200 ? 347 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 1903 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 0.643 1.500 ? 1415 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1.266 2.000 ? 2291 ? 'X-RAY DIFFRACTION' r_scbond_it 1.675 3.000 ? 1061 ? 'X-RAY DIFFRACTION' r_scangle_it 2.989 4.500 ? 1045 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.08 _refine_ls_shell.number_reflns_R_work 460 _refine_ls_shell.R_factor_R_work 0.2150 _refine_ls_shell.percent_reflns_obs 95.29 _refine_ls_shell.R_factor_R_free 0.3720 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3TFV _struct.title 'Crystal structure of dehydrosqualene synthase (crtm) from s. aureus complexed with bph-1154' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TFV _struct_keywords.pdbx_keywords 'TRANSFERASE/transferase inhibitor' _struct_keywords.text 'head to head prenyl synthase, TRANSFERASE-transferase inhibitor complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 8 ? SER A 25 ? THR A 2 SER A 19 1 ? 18 HELX_P HELX_P2 2 SER A 25 ? ASP A 33 ? SER A 19 ASP A 27 1 ? 9 HELX_P HELX_P3 3 PRO A 36 ? SER A 56 ? PRO A 30 SER A 50 1 ? 21 HELX_P HELX_P4 4 PHE A 65 ? TYR A 79 ? PHE A 59 TYR A 73 1 ? 15 HELX_P HELX_P5 5 ASP A 89 ? LYS A 103 ? ASP A 83 LYS A 97 1 ? 15 HELX_P HELX_P6 6 ALA A 106 ? GLN A 121 ? ALA A 100 GLN A 115 1 ? 16 HELX_P HELX_P7 7 THR A 128 ? ALA A 140 ? THR A 122 ALA A 134 1 ? 13 HELX_P HELX_P8 8 ALA A 140 ? THR A 148 ? ALA A 134 THR A 142 1 ? 9 HELX_P HELX_P9 9 PRO A 149 ? LEU A 151 ? PRO A 143 LEU A 145 5 ? 3 HELX_P HELX_P10 10 THR A 156 ? ASP A 178 ? THR A 150 ASP A 172 1 ? 23 HELX_P HELX_P11 11 ASP A 178 ? ASN A 185 ? ASP A 172 ASN A 179 1 ? 8 HELX_P HELX_P12 12 SER A 191 ? GLU A 199 ? SER A 185 GLU A 193 1 ? 9 HELX_P HELX_P13 13 ASP A 201 ? GLY A 209 ? ASP A 195 GLY A 203 1 ? 9 HELX_P HELX_P14 14 ASN A 211 ? GLN A 235 ? ASN A 205 GLN A 229 1 ? 25 HELX_P HELX_P15 15 ILE A 236 ? PHE A 239 ? ILE A 230 PHE A 233 5 ? 4 HELX_P HELX_P16 16 GLU A 242 ? ALA A 264 ? GLU A 236 ALA A 258 1 ? 23 HELX_P HELX_P17 17 GLU A 275 ? LYS A 289 ? GLU A 269 LYS A 283 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 288 ? 4 'BINDING SITE FOR RESIDUE MG A 288' AC2 Software A 2CN 289 ? 12 'BINDING SITE FOR RESIDUE 2CN A 289' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASN A 174 ? ASN A 168 . ? 1_555 ? 2 AC1 4 ASP A 178 ? ASP A 172 . ? 1_555 ? 3 AC1 4 ASP A 182 ? ASP A 176 . ? 1_555 ? 4 AC1 4 2CN C . ? 2CN A 289 . ? 1_555 ? 5 AC2 12 PHE A 28 ? PHE A 22 . ? 1_555 ? 6 AC2 12 TYR A 47 ? TYR A 41 . ? 1_555 ? 7 AC2 12 CYS A 50 ? CYS A 44 . ? 1_555 ? 8 AC2 12 ARG A 51 ? ARG A 45 . ? 1_555 ? 9 AC2 12 ASP A 54 ? ASP A 48 . ? 1_555 ? 10 AC2 12 ASP A 120 ? ASP A 114 . ? 1_555 ? 11 AC2 12 VAL A 139 ? VAL A 133 . ? 1_555 ? 12 AC2 12 ALA A 140 ? ALA A 134 . ? 1_555 ? 13 AC2 12 VAL A 143 ? VAL A 137 . ? 1_555 ? 14 AC2 12 LEU A 166 ? LEU A 160 . ? 1_555 ? 15 AC2 12 LEU A 170 ? LEU A 164 . ? 1_555 ? 16 AC2 12 MG B . ? MG A 288 . ? 1_555 ? # _database_PDB_matrix.entry_id 3TFV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3TFV _atom_sites.fract_transf_matrix[1][1] 0.012346 _atom_sites.fract_transf_matrix[1][2] 0.007128 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014256 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011021 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 -5 ? ? ? A . n A 1 2 ALA 2 -4 ? ? ? A . n A 1 3 ALA 3 -3 ? ? ? A . n A 1 4 ALA 4 -2 ? ? ? A . n A 1 5 ALA 5 -1 ? ? ? A . n A 1 6 ALA 6 0 ? ? ? A . n A 1 7 MET 7 1 1 MET MET A . n A 1 8 THR 8 2 2 THR THR A . n A 1 9 MET 9 3 3 MET MET A . n A 1 10 MET 10 4 4 MET MET A . n A 1 11 ASP 11 5 5 ASP ASP A . n A 1 12 MET 12 6 6 MET MET A . n A 1 13 ASN 13 7 7 ASN ASN A . n A 1 14 PHE 14 8 8 PHE PHE A . n A 1 15 LYS 15 9 9 LYS LYS A . n A 1 16 TYR 16 10 10 TYR TYR A . n A 1 17 CYS 17 11 11 CYS CYS A . n A 1 18 HIS 18 12 12 HIS HIS A . n A 1 19 LYS 19 13 13 LYS LYS A . n A 1 20 ILE 20 14 14 ILE ILE A . n A 1 21 MET 21 15 15 MET MET A . n A 1 22 LYS 22 16 16 LYS LYS A . n A 1 23 LYS 23 17 17 LYS LYS A . n A 1 24 HIS 24 18 18 HIS HIS A . n A 1 25 SER 25 19 19 SER SER A . n A 1 26 LYS 26 20 20 LYS LYS A . n A 1 27 SER 27 21 21 SER SER A . n A 1 28 PHE 28 22 22 PHE PHE A . n A 1 29 SER 29 23 23 SER SER A . n A 1 30 TYR 30 24 24 TYR TYR A . n A 1 31 ALA 31 25 25 ALA ALA A . n A 1 32 PHE 32 26 26 PHE PHE A . n A 1 33 ASP 33 27 27 ASP ASP A . n A 1 34 LEU 34 28 28 LEU LEU A . n A 1 35 LEU 35 29 29 LEU LEU A . n A 1 36 PRO 36 30 30 PRO PRO A . n A 1 37 GLU 37 31 31 GLU GLU A . n A 1 38 ASP 38 32 32 ASP ASP A . n A 1 39 GLN 39 33 33 GLN GLN A . n A 1 40 ARG 40 34 34 ARG ARG A . n A 1 41 LYS 41 35 35 LYS LYS A . n A 1 42 ALA 42 36 36 ALA ALA A . n A 1 43 VAL 43 37 37 VAL VAL A . n A 1 44 TRP 44 38 38 TRP TRP A . n A 1 45 ALA 45 39 39 ALA ALA A . n A 1 46 ILE 46 40 40 ILE ILE A . n A 1 47 TYR 47 41 41 TYR TYR A . n A 1 48 ALA 48 42 42 ALA ALA A . n A 1 49 VAL 49 43 43 VAL VAL A . n A 1 50 CYS 50 44 44 CYS CYS A . n A 1 51 ARG 51 45 45 ARG ARG A . n A 1 52 LYS 52 46 46 LYS LYS A . n A 1 53 ILE 53 47 47 ILE ILE A . n A 1 54 ASP 54 48 48 ASP ASP A . n A 1 55 ASP 55 49 49 ASP ASP A . n A 1 56 SER 56 50 50 SER SER A . n A 1 57 ILE 57 51 51 ILE ILE A . n A 1 58 ASP 58 52 52 ASP ASP A . n A 1 59 VAL 59 53 53 VAL VAL A . n A 1 60 TYR 60 54 54 TYR TYR A . n A 1 61 GLY 61 55 55 GLY GLY A . n A 1 62 ASP 62 56 56 ASP ASP A . n A 1 63 ILE 63 57 57 ILE ILE A . n A 1 64 GLN 64 58 58 GLN GLN A . n A 1 65 PHE 65 59 59 PHE PHE A . n A 1 66 LEU 66 60 60 LEU LEU A . n A 1 67 ASN 67 61 61 ASN ASN A . n A 1 68 GLN 68 62 62 GLN GLN A . n A 1 69 ILE 69 63 63 ILE ILE A . n A 1 70 LYS 70 64 64 LYS LYS A . n A 1 71 GLU 71 65 65 GLU GLU A . n A 1 72 ASP 72 66 66 ASP ASP A . n A 1 73 ILE 73 67 67 ILE ILE A . n A 1 74 GLN 74 68 68 GLN GLN A . n A 1 75 SER 75 69 69 SER SER A . n A 1 76 ILE 76 70 70 ILE ILE A . n A 1 77 GLU 77 71 71 GLU GLU A . n A 1 78 LYS 78 72 72 LYS LYS A . n A 1 79 TYR 79 73 73 TYR TYR A . n A 1 80 PRO 80 74 74 PRO PRO A . n A 1 81 TYR 81 75 75 TYR TYR A . n A 1 82 GLU 82 76 76 GLU GLU A . n A 1 83 TYR 83 77 77 TYR TYR A . n A 1 84 HIS 84 78 78 HIS HIS A . n A 1 85 HIS 85 79 79 HIS HIS A . n A 1 86 PHE 86 80 80 PHE PHE A . n A 1 87 GLN 87 81 81 GLN GLN A . n A 1 88 SER 88 82 82 SER SER A . n A 1 89 ASP 89 83 83 ASP ASP A . n A 1 90 ARG 90 84 84 ARG ARG A . n A 1 91 ARG 91 85 85 ARG ARG A . n A 1 92 ILE 92 86 86 ILE ILE A . n A 1 93 MET 93 87 87 MET MET A . n A 1 94 MET 94 88 88 MET MET A . n A 1 95 ALA 95 89 89 ALA ALA A . n A 1 96 LEU 96 90 90 LEU LEU A . n A 1 97 GLN 97 91 91 GLN GLN A . n A 1 98 HIS 98 92 92 HIS HIS A . n A 1 99 VAL 99 93 93 VAL VAL A . n A 1 100 ALA 100 94 94 ALA ALA A . n A 1 101 GLN 101 95 95 GLN GLN A . n A 1 102 HIS 102 96 96 HIS HIS A . n A 1 103 LYS 103 97 97 LYS LYS A . n A 1 104 ASN 104 98 98 ASN ASN A . n A 1 105 ILE 105 99 99 ILE ILE A . n A 1 106 ALA 106 100 100 ALA ALA A . n A 1 107 PHE 107 101 101 PHE PHE A . n A 1 108 GLN 108 102 102 GLN GLN A . n A 1 109 SER 109 103 103 SER SER A . n A 1 110 PHE 110 104 104 PHE PHE A . n A 1 111 TYR 111 105 105 TYR TYR A . n A 1 112 ASN 112 106 106 ASN ASN A . n A 1 113 LEU 113 107 107 LEU LEU A . n A 1 114 ILE 114 108 108 ILE ILE A . n A 1 115 ASP 115 109 109 ASP ASP A . n A 1 116 THR 116 110 110 THR THR A . n A 1 117 VAL 117 111 111 VAL VAL A . n A 1 118 TYR 118 112 112 TYR TYR A . n A 1 119 LYS 119 113 113 LYS LYS A . n A 1 120 ASP 120 114 114 ASP ASP A . n A 1 121 GLN 121 115 115 GLN GLN A . n A 1 122 HIS 122 116 116 HIS HIS A . n A 1 123 PHE 123 117 117 PHE PHE A . n A 1 124 THR 124 118 118 THR THR A . n A 1 125 MET 125 119 119 MET MET A . n A 1 126 PHE 126 120 120 PHE PHE A . n A 1 127 GLU 127 121 121 GLU GLU A . n A 1 128 THR 128 122 122 THR THR A . n A 1 129 ASP 129 123 123 ASP ASP A . n A 1 130 ALA 130 124 124 ALA ALA A . n A 1 131 GLU 131 125 125 GLU GLU A . n A 1 132 LEU 132 126 126 LEU LEU A . n A 1 133 PHE 133 127 127 PHE PHE A . n A 1 134 GLY 134 128 128 GLY GLY A . n A 1 135 TYR 135 129 129 TYR TYR A . n A 1 136 CYS 136 130 130 CYS CYS A . n A 1 137 TYR 137 131 131 TYR TYR A . n A 1 138 GLY 138 132 132 GLY GLY A . n A 1 139 VAL 139 133 133 VAL VAL A . n A 1 140 ALA 140 134 134 ALA ALA A . n A 1 141 GLY 141 135 135 GLY GLY A . n A 1 142 THR 142 136 136 THR THR A . n A 1 143 VAL 143 137 137 VAL VAL A . n A 1 144 GLY 144 138 138 GLY GLY A . n A 1 145 GLU 145 139 139 GLU GLU A . n A 1 146 VAL 146 140 140 VAL VAL A . n A 1 147 LEU 147 141 141 LEU LEU A . n A 1 148 THR 148 142 142 THR THR A . n A 1 149 PRO 149 143 143 PRO PRO A . n A 1 150 ILE 150 144 144 ILE ILE A . n A 1 151 LEU 151 145 145 LEU LEU A . n A 1 152 SER 152 146 146 SER SER A . n A 1 153 ASP 153 147 147 ASP ASP A . n A 1 154 HIS 154 148 148 HIS HIS A . n A 1 155 GLU 155 149 149 GLU GLU A . n A 1 156 THR 156 150 150 THR THR A . n A 1 157 HIS 157 151 151 HIS HIS A . n A 1 158 GLN 158 152 152 GLN GLN A . n A 1 159 THR 159 153 153 THR THR A . n A 1 160 TYR 160 154 154 TYR TYR A . n A 1 161 ASP 161 155 155 ASP ASP A . n A 1 162 VAL 162 156 156 VAL VAL A . n A 1 163 ALA 163 157 157 ALA ALA A . n A 1 164 ARG 164 158 158 ARG ARG A . n A 1 165 ARG 165 159 159 ARG ARG A . n A 1 166 LEU 166 160 160 LEU LEU A . n A 1 167 GLY 167 161 161 GLY GLY A . n A 1 168 GLU 168 162 162 GLU GLU A . n A 1 169 SER 169 163 163 SER SER A . n A 1 170 LEU 170 164 164 LEU LEU A . n A 1 171 GLN 171 165 165 GLN GLN A . n A 1 172 LEU 172 166 166 LEU LEU A . n A 1 173 ILE 173 167 167 ILE ILE A . n A 1 174 ASN 174 168 168 ASN ASN A . n A 1 175 ILE 175 169 169 ILE ILE A . n A 1 176 LEU 176 170 170 LEU LEU A . n A 1 177 ARG 177 171 171 ARG ARG A . n A 1 178 ASP 178 172 172 ASP ASP A . n A 1 179 VAL 179 173 173 VAL VAL A . n A 1 180 GLY 180 174 174 GLY GLY A . n A 1 181 GLU 181 175 175 GLU GLU A . n A 1 182 ASP 182 176 176 ASP ASP A . n A 1 183 PHE 183 177 177 PHE PHE A . n A 1 184 GLU 184 178 178 GLU GLU A . n A 1 185 ASN 185 179 179 ASN ASN A . n A 1 186 GLU 186 180 180 GLU GLU A . n A 1 187 ARG 187 181 181 ARG ARG A . n A 1 188 ILE 188 182 182 ILE ILE A . n A 1 189 TYR 189 183 183 TYR TYR A . n A 1 190 PHE 190 184 184 PHE PHE A . n A 1 191 SER 191 185 185 SER SER A . n A 1 192 LYS 192 186 186 LYS LYS A . n A 1 193 GLN 193 187 187 GLN GLN A . n A 1 194 ARG 194 188 188 ARG ARG A . n A 1 195 LEU 195 189 189 LEU LEU A . n A 1 196 LYS 196 190 190 LYS LYS A . n A 1 197 GLN 197 191 191 GLN GLN A . n A 1 198 TYR 198 192 192 TYR TYR A . n A 1 199 GLU 199 193 193 GLU GLU A . n A 1 200 VAL 200 194 194 VAL VAL A . n A 1 201 ASP 201 195 195 ASP ASP A . n A 1 202 ILE 202 196 196 ILE ILE A . n A 1 203 ALA 203 197 197 ALA ALA A . n A 1 204 GLU 204 198 198 GLU GLU A . n A 1 205 VAL 205 199 199 VAL VAL A . n A 1 206 TYR 206 200 200 TYR TYR A . n A 1 207 GLN 207 201 201 GLN GLN A . n A 1 208 ASN 208 202 202 ASN ASN A . n A 1 209 GLY 209 203 203 GLY GLY A . n A 1 210 VAL 210 204 204 VAL VAL A . n A 1 211 ASN 211 205 205 ASN ASN A . n A 1 212 ASN 212 206 206 ASN ASN A . n A 1 213 HIS 213 207 207 HIS HIS A . n A 1 214 TYR 214 208 208 TYR TYR A . n A 1 215 ILE 215 209 209 ILE ILE A . n A 1 216 ASP 216 210 210 ASP ASP A . n A 1 217 LEU 217 211 211 LEU LEU A . n A 1 218 TRP 218 212 212 TRP TRP A . n A 1 219 GLU 219 213 213 GLU GLU A . n A 1 220 TYR 220 214 214 TYR TYR A . n A 1 221 TYR 221 215 215 TYR TYR A . n A 1 222 ALA 222 216 216 ALA ALA A . n A 1 223 ALA 223 217 217 ALA ALA A . n A 1 224 ILE 224 218 218 ILE ILE A . n A 1 225 ALA 225 219 219 ALA ALA A . n A 1 226 GLU 226 220 220 GLU GLU A . n A 1 227 LYS 227 221 221 LYS LYS A . n A 1 228 ASP 228 222 222 ASP ASP A . n A 1 229 PHE 229 223 223 PHE PHE A . n A 1 230 ARG 230 224 224 ARG ARG A . n A 1 231 ASP 231 225 225 ASP ASP A . n A 1 232 VAL 232 226 226 VAL VAL A . n A 1 233 MET 233 227 227 MET MET A . n A 1 234 ASP 234 228 228 ASP ASP A . n A 1 235 GLN 235 229 229 GLN GLN A . n A 1 236 ILE 236 230 230 ILE ILE A . n A 1 237 LYS 237 231 231 LYS LYS A . n A 1 238 VAL 238 232 232 VAL VAL A . n A 1 239 PHE 239 233 233 PHE PHE A . n A 1 240 SER 240 234 234 SER SER A . n A 1 241 ILE 241 235 235 ILE ILE A . n A 1 242 GLU 242 236 236 GLU GLU A . n A 1 243 ALA 243 237 237 ALA ALA A . n A 1 244 GLN 244 238 238 GLN GLN A . n A 1 245 PRO 245 239 239 PRO PRO A . n A 1 246 ILE 246 240 240 ILE ILE A . n A 1 247 ILE 247 241 241 ILE ILE A . n A 1 248 GLU 248 242 242 GLU GLU A . n A 1 249 LEU 249 243 243 LEU LEU A . n A 1 250 ALA 250 244 244 ALA ALA A . n A 1 251 ALA 251 245 245 ALA ALA A . n A 1 252 ARG 252 246 246 ARG ARG A . n A 1 253 ILE 253 247 247 ILE ILE A . n A 1 254 TYR 254 248 248 TYR TYR A . n A 1 255 ILE 255 249 249 ILE ILE A . n A 1 256 GLU 256 250 250 GLU GLU A . n A 1 257 ILE 257 251 251 ILE ILE A . n A 1 258 LEU 258 252 252 LEU LEU A . n A 1 259 ASP 259 253 253 ASP ASP A . n A 1 260 GLU 260 254 254 GLU GLU A . n A 1 261 VAL 261 255 255 VAL VAL A . n A 1 262 ARG 262 256 256 ARG ARG A . n A 1 263 GLN 263 257 257 GLN GLN A . n A 1 264 ALA 264 258 258 ALA ALA A . n A 1 265 ASN 265 259 259 ASN ASN A . n A 1 266 TYR 266 260 260 TYR TYR A . n A 1 267 THR 267 261 261 THR THR A . n A 1 268 LEU 268 262 262 LEU LEU A . n A 1 269 HIS 269 263 263 HIS HIS A . n A 1 270 GLU 270 264 264 GLU GLU A . n A 1 271 ARG 271 265 265 ARG ARG A . n A 1 272 VAL 272 266 266 VAL VAL A . n A 1 273 PHE 273 267 267 PHE PHE A . n A 1 274 VAL 274 268 268 VAL VAL A . n A 1 275 GLU 275 269 269 GLU GLU A . n A 1 276 LYS 276 270 270 LYS LYS A . n A 1 277 ARG 277 271 271 ARG ARG A . n A 1 278 LYS 278 272 272 LYS LYS A . n A 1 279 LYS 279 273 273 LYS LYS A . n A 1 280 ALA 280 274 274 ALA ALA A . n A 1 281 LYS 281 275 275 LYS LYS A . n A 1 282 LEU 282 276 276 LEU LEU A . n A 1 283 PHE 283 277 277 PHE PHE A . n A 1 284 HIS 284 278 278 HIS HIS A . n A 1 285 GLU 285 279 279 GLU GLU A . n A 1 286 ILE 286 280 280 ILE ILE A . n A 1 287 ASN 287 281 281 ASN ASN A . n A 1 288 SER 288 282 282 SER SER A . n A 1 289 LYS 289 283 283 LYS LYS A . n A 1 290 TYR 290 284 284 TYR TYR A . n A 1 291 HIS 291 285 ? ? ? A . n A 1 292 ARG 292 286 ? ? ? A . n A 1 293 ILE 293 287 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 288 288 MG MG A . C 3 2CN 1 289 289 2CN 2CN A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-04-04 2 'Structure model' 1 1 2012-05-23 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASES phasing . ? 1 REFMAC refinement 5.5.0109 ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OH A TYR 77 ? ? NH2 A ARG 84 ? ? 1.96 2 1 O A PHE 59 ? ? N A GLN 62 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 2 ? ? -65.84 -154.25 2 1 VAL A 53 ? ? -131.12 -73.99 3 1 ILE A 57 ? ? -61.84 -83.75 4 1 GLN A 58 ? ? 42.41 -151.44 5 1 PHE A 59 ? ? 23.90 -82.53 6 1 LEU A 60 ? ? -28.31 -36.59 7 1 LYS A 72 ? ? -76.82 -70.36 8 1 SER A 82 ? ? -96.15 -102.01 9 1 HIS A 116 ? ? -100.00 42.22 10 1 MET A 119 ? ? -48.30 154.62 11 1 ALA A 134 ? ? -133.72 -41.86 12 1 ASN A 205 ? ? -126.35 -166.38 13 1 SER A 234 ? ? -48.19 156.05 14 1 GLU A 264 ? ? 162.69 158.85 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA -5 ? A ALA 1 2 1 Y 1 A ALA -4 ? A ALA 2 3 1 Y 1 A ALA -3 ? A ALA 3 4 1 Y 1 A ALA -2 ? A ALA 4 5 1 Y 1 A ALA -1 ? A ALA 5 6 1 Y 1 A ALA 0 ? A ALA 6 7 1 Y 1 A HIS 285 ? A HIS 291 8 1 Y 1 A ARG 286 ? A ARG 292 9 1 Y 1 A ILE 287 ? A ILE 293 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2CN CAA C N N 1 2CN OAB O N N 2 2CN OAC O N N 3 2CN BRAD BR N N 4 2CN CAE C Y N 5 2CN CAF C Y N 6 2CN CAG C Y N 7 2CN CAH C Y N 8 2CN CAI C Y N 9 2CN CAJ C Y N 10 2CN CAK C Y N 11 2CN CAL C N N 12 2CN CAM C N N 13 2CN CAN C N N 14 2CN CAO C N N 15 2CN CAP C N N 16 2CN CAQ C N N 17 2CN CAR C N N 18 2CN CAS C N N 19 2CN OAT O N N 20 2CN SAU S N N 21 2CN CAV C N N 22 2CN CAW C Y N 23 2CN CAX C Y N 24 2CN CAY C Y N 25 2CN CAZ C Y N 26 2CN CBA C Y N 27 2CN HAA H N N 28 2CN HAAA H N N 29 2CN HAAB H N N 30 2CN HAE H N N 31 2CN HAF H N N 32 2CN HAG H N N 33 2CN HAH H N N 34 2CN HAI H N N 35 2CN HAJ H N N 36 2CN HAK H N N 37 2CN HAL H N N 38 2CN HALA H N N 39 2CN HAM H N N 40 2CN HAMA H N N 41 2CN HAN H N N 42 2CN HANA H N N 43 2CN HAO H N N 44 2CN HAOA H N N 45 2CN HAP H N N 46 2CN HAPA H N N 47 2CN HAQ H N N 48 2CN HAQA H N N 49 2CN HAR H N N 50 2CN HARA H N N 51 2CN HAS H N N 52 2CN HASA H N N 53 2CN H27 H N N 54 ALA N N N N 55 ALA CA C N S 56 ALA C C N N 57 ALA O O N N 58 ALA CB C N N 59 ALA OXT O N N 60 ALA H H N N 61 ALA H2 H N N 62 ALA HA H N N 63 ALA HB1 H N N 64 ALA HB2 H N N 65 ALA HB3 H N N 66 ALA HXT H N N 67 ARG N N N N 68 ARG CA C N S 69 ARG C C N N 70 ARG O O N N 71 ARG CB C N N 72 ARG CG C N N 73 ARG CD C N N 74 ARG NE N N N 75 ARG CZ C N N 76 ARG NH1 N N N 77 ARG NH2 N N N 78 ARG OXT O N N 79 ARG H H N N 80 ARG H2 H N N 81 ARG HA H N N 82 ARG HB2 H N N 83 ARG HB3 H N N 84 ARG HG2 H N N 85 ARG HG3 H N N 86 ARG HD2 H N N 87 ARG HD3 H N N 88 ARG HE H N N 89 ARG HH11 H N N 90 ARG HH12 H N N 91 ARG HH21 H N N 92 ARG HH22 H N N 93 ARG HXT H N N 94 ASN N N N N 95 ASN CA C N S 96 ASN C C N N 97 ASN O O N N 98 ASN CB C N N 99 ASN CG C N N 100 ASN OD1 O N N 101 ASN ND2 N N N 102 ASN OXT O N N 103 ASN H H N N 104 ASN H2 H N N 105 ASN HA H N N 106 ASN HB2 H N N 107 ASN HB3 H N N 108 ASN HD21 H N N 109 ASN HD22 H N N 110 ASN HXT H N N 111 ASP N N N N 112 ASP CA C N S 113 ASP C C N N 114 ASP O O N N 115 ASP CB C N N 116 ASP CG C N N 117 ASP OD1 O N N 118 ASP OD2 O N N 119 ASP OXT O N N 120 ASP H H N N 121 ASP H2 H N N 122 ASP HA H N N 123 ASP HB2 H N N 124 ASP HB3 H N N 125 ASP HD2 H N N 126 ASP HXT H N N 127 CYS N N N N 128 CYS CA C N R 129 CYS C C N N 130 CYS O O N N 131 CYS CB C N N 132 CYS SG S N N 133 CYS OXT O N N 134 CYS H H N N 135 CYS H2 H N N 136 CYS HA H N N 137 CYS HB2 H N N 138 CYS HB3 H N N 139 CYS HG H N N 140 CYS HXT H N N 141 GLN N N N N 142 GLN CA C N S 143 GLN C C N N 144 GLN O O N N 145 GLN CB C N N 146 GLN CG C N N 147 GLN CD C N N 148 GLN OE1 O N N 149 GLN NE2 N N N 150 GLN OXT O N N 151 GLN H H N N 152 GLN H2 H N N 153 GLN HA H N N 154 GLN HB2 H N N 155 GLN HB3 H N N 156 GLN HG2 H N N 157 GLN HG3 H N N 158 GLN HE21 H N N 159 GLN HE22 H N N 160 GLN HXT H N N 161 GLU N N N N 162 GLU CA C N S 163 GLU C C N N 164 GLU O O N N 165 GLU CB C N N 166 GLU CG C N N 167 GLU CD C N N 168 GLU OE1 O N N 169 GLU OE2 O N N 170 GLU OXT O N N 171 GLU H H N N 172 GLU H2 H N N 173 GLU HA H N N 174 GLU HB2 H N N 175 GLU HB3 H N N 176 GLU HG2 H N N 177 GLU HG3 H N N 178 GLU HE2 H N N 179 GLU HXT H N N 180 GLY N N N N 181 GLY CA C N N 182 GLY C C N N 183 GLY O O N N 184 GLY OXT O N N 185 GLY H H N N 186 GLY H2 H N N 187 GLY HA2 H N N 188 GLY HA3 H N N 189 GLY HXT H N N 190 HIS N N N N 191 HIS CA C N S 192 HIS C C N N 193 HIS O O N N 194 HIS CB C N N 195 HIS CG C Y N 196 HIS ND1 N Y N 197 HIS CD2 C Y N 198 HIS CE1 C Y N 199 HIS NE2 N Y N 200 HIS OXT O N N 201 HIS H H N N 202 HIS H2 H N N 203 HIS HA H N N 204 HIS HB2 H N N 205 HIS HB3 H N N 206 HIS HD1 H N N 207 HIS HD2 H N N 208 HIS HE1 H N N 209 HIS HE2 H N N 210 HIS HXT H N N 211 ILE N N N N 212 ILE CA C N S 213 ILE C C N N 214 ILE O O N N 215 ILE CB C N S 216 ILE CG1 C N N 217 ILE CG2 C N N 218 ILE CD1 C N N 219 ILE OXT O N N 220 ILE H H N N 221 ILE H2 H N N 222 ILE HA H N N 223 ILE HB H N N 224 ILE HG12 H N N 225 ILE HG13 H N N 226 ILE HG21 H N N 227 ILE HG22 H N N 228 ILE HG23 H N N 229 ILE HD11 H N N 230 ILE HD12 H N N 231 ILE HD13 H N N 232 ILE HXT H N N 233 LEU N N N N 234 LEU CA C N S 235 LEU C C N N 236 LEU O O N N 237 LEU CB C N N 238 LEU CG C N N 239 LEU CD1 C N N 240 LEU CD2 C N N 241 LEU OXT O N N 242 LEU H H N N 243 LEU H2 H N N 244 LEU HA H N N 245 LEU HB2 H N N 246 LEU HB3 H N N 247 LEU HG H N N 248 LEU HD11 H N N 249 LEU HD12 H N N 250 LEU HD13 H N N 251 LEU HD21 H N N 252 LEU HD22 H N N 253 LEU HD23 H N N 254 LEU HXT H N N 255 LYS N N N N 256 LYS CA C N S 257 LYS C C N N 258 LYS O O N N 259 LYS CB C N N 260 LYS CG C N N 261 LYS CD C N N 262 LYS CE C N N 263 LYS NZ N N N 264 LYS OXT O N N 265 LYS H H N N 266 LYS H2 H N N 267 LYS HA H N N 268 LYS HB2 H N N 269 LYS HB3 H N N 270 LYS HG2 H N N 271 LYS HG3 H N N 272 LYS HD2 H N N 273 LYS HD3 H N N 274 LYS HE2 H N N 275 LYS HE3 H N N 276 LYS HZ1 H N N 277 LYS HZ2 H N N 278 LYS HZ3 H N N 279 LYS HXT H N N 280 MET N N N N 281 MET CA C N S 282 MET C C N N 283 MET O O N N 284 MET CB C N N 285 MET CG C N N 286 MET SD S N N 287 MET CE C N N 288 MET OXT O N N 289 MET H H N N 290 MET H2 H N N 291 MET HA H N N 292 MET HB2 H N N 293 MET HB3 H N N 294 MET HG2 H N N 295 MET HG3 H N N 296 MET HE1 H N N 297 MET HE2 H N N 298 MET HE3 H N N 299 MET HXT H N N 300 MG MG MG N N 301 PHE N N N N 302 PHE CA C N S 303 PHE C C N N 304 PHE O O N N 305 PHE CB C N N 306 PHE CG C Y N 307 PHE CD1 C Y N 308 PHE CD2 C Y N 309 PHE CE1 C Y N 310 PHE CE2 C Y N 311 PHE CZ C Y N 312 PHE OXT O N N 313 PHE H H N N 314 PHE H2 H N N 315 PHE HA H N N 316 PHE HB2 H N N 317 PHE HB3 H N N 318 PHE HD1 H N N 319 PHE HD2 H N N 320 PHE HE1 H N N 321 PHE HE2 H N N 322 PHE HZ H N N 323 PHE HXT H N N 324 PRO N N N N 325 PRO CA C N S 326 PRO C C N N 327 PRO O O N N 328 PRO CB C N N 329 PRO CG C N N 330 PRO CD C N N 331 PRO OXT O N N 332 PRO H H N N 333 PRO HA H N N 334 PRO HB2 H N N 335 PRO HB3 H N N 336 PRO HG2 H N N 337 PRO HG3 H N N 338 PRO HD2 H N N 339 PRO HD3 H N N 340 PRO HXT H N N 341 SER N N N N 342 SER CA C N S 343 SER C C N N 344 SER O O N N 345 SER CB C N N 346 SER OG O N N 347 SER OXT O N N 348 SER H H N N 349 SER H2 H N N 350 SER HA H N N 351 SER HB2 H N N 352 SER HB3 H N N 353 SER HG H N N 354 SER HXT H N N 355 THR N N N N 356 THR CA C N S 357 THR C C N N 358 THR O O N N 359 THR CB C N R 360 THR OG1 O N N 361 THR CG2 C N N 362 THR OXT O N N 363 THR H H N N 364 THR H2 H N N 365 THR HA H N N 366 THR HB H N N 367 THR HG1 H N N 368 THR HG21 H N N 369 THR HG22 H N N 370 THR HG23 H N N 371 THR HXT H N N 372 TRP N N N N 373 TRP CA C N S 374 TRP C C N N 375 TRP O O N N 376 TRP CB C N N 377 TRP CG C Y N 378 TRP CD1 C Y N 379 TRP CD2 C Y N 380 TRP NE1 N Y N 381 TRP CE2 C Y N 382 TRP CE3 C Y N 383 TRP CZ2 C Y N 384 TRP CZ3 C Y N 385 TRP CH2 C Y N 386 TRP OXT O N N 387 TRP H H N N 388 TRP H2 H N N 389 TRP HA H N N 390 TRP HB2 H N N 391 TRP HB3 H N N 392 TRP HD1 H N N 393 TRP HE1 H N N 394 TRP HE3 H N N 395 TRP HZ2 H N N 396 TRP HZ3 H N N 397 TRP HH2 H N N 398 TRP HXT H N N 399 TYR N N N N 400 TYR CA C N S 401 TYR C C N N 402 TYR O O N N 403 TYR CB C N N 404 TYR CG C Y N 405 TYR CD1 C Y N 406 TYR CD2 C Y N 407 TYR CE1 C Y N 408 TYR CE2 C Y N 409 TYR CZ C Y N 410 TYR OH O N N 411 TYR OXT O N N 412 TYR H H N N 413 TYR H2 H N N 414 TYR HA H N N 415 TYR HB2 H N N 416 TYR HB3 H N N 417 TYR HD1 H N N 418 TYR HD2 H N N 419 TYR HE1 H N N 420 TYR HE2 H N N 421 TYR HH H N N 422 TYR HXT H N N 423 VAL N N N N 424 VAL CA C N S 425 VAL C C N N 426 VAL O O N N 427 VAL CB C N N 428 VAL CG1 C N N 429 VAL CG2 C N N 430 VAL OXT O N N 431 VAL H H N N 432 VAL H2 H N N 433 VAL HA H N N 434 VAL HB H N N 435 VAL HG11 H N N 436 VAL HG12 H N N 437 VAL HG13 H N N 438 VAL HG21 H N N 439 VAL HG22 H N N 440 VAL HG23 H N N 441 VAL HXT H N N 442 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2CN CAA CAL sing N N 1 2CN CAA HAA sing N N 2 2CN CAA HAAA sing N N 3 2CN CAA HAAB sing N N 4 2CN OAB CAV sing N N 5 2CN OAC CAV doub N N 6 2CN BRAD CAW sing N N 7 2CN CAE CAF doub Y N 8 2CN CAE CAH sing Y N 9 2CN CAE HAE sing N N 10 2CN CAF CAX sing Y N 11 2CN CAF HAF sing N N 12 2CN CAG CAI doub Y N 13 2CN CAG CAW sing Y N 14 2CN CAG HAG sing N N 15 2CN CAH CAY doub Y N 16 2CN CAH HAH sing N N 17 2CN CAI CAZ sing Y N 18 2CN CAI HAI sing N N 19 2CN CAJ CAX doub Y N 20 2CN CAJ CAY sing Y N 21 2CN CAJ HAJ sing N N 22 2CN CAK CAW doub Y N 23 2CN CAK CBA sing Y N 24 2CN CAK HAK sing N N 25 2CN CAL CAM sing N N 26 2CN CAL HAL sing N N 27 2CN CAL HALA sing N N 28 2CN CAM CAN sing N N 29 2CN CAM HAM sing N N 30 2CN CAM HAMA sing N N 31 2CN CAN CAO sing N N 32 2CN CAN HAN sing N N 33 2CN CAN HANA sing N N 34 2CN CAO CAP sing N N 35 2CN CAO HAO sing N N 36 2CN CAO HAOA sing N N 37 2CN CAP CAQ sing N N 38 2CN CAP HAP sing N N 39 2CN CAP HAPA sing N N 40 2CN CAQ CAR sing N N 41 2CN CAQ HAQ sing N N 42 2CN CAQ HAQA sing N N 43 2CN CAR OAT sing N N 44 2CN CAR HAR sing N N 45 2CN CAR HARA sing N N 46 2CN CAS SAU sing N N 47 2CN CAS CAX sing N N 48 2CN CAS HAS sing N N 49 2CN CAS HASA sing N N 50 2CN OAT CAY sing N N 51 2CN SAU CAZ sing N N 52 2CN CAV CBA sing N N 53 2CN CAZ CBA doub Y N 54 2CN OAB H27 sing N N 55 ALA N CA sing N N 56 ALA N H sing N N 57 ALA N H2 sing N N 58 ALA CA C sing N N 59 ALA CA CB sing N N 60 ALA CA HA sing N N 61 ALA C O doub N N 62 ALA C OXT sing N N 63 ALA CB HB1 sing N N 64 ALA CB HB2 sing N N 65 ALA CB HB3 sing N N 66 ALA OXT HXT sing N N 67 ARG N CA sing N N 68 ARG N H sing N N 69 ARG N H2 sing N N 70 ARG CA C sing N N 71 ARG CA CB sing N N 72 ARG CA HA sing N N 73 ARG C O doub N N 74 ARG C OXT sing N N 75 ARG CB CG sing N N 76 ARG CB HB2 sing N N 77 ARG CB HB3 sing N N 78 ARG CG CD sing N N 79 ARG CG HG2 sing N N 80 ARG CG HG3 sing N N 81 ARG CD NE sing N N 82 ARG CD HD2 sing N N 83 ARG CD HD3 sing N N 84 ARG NE CZ sing N N 85 ARG NE HE sing N N 86 ARG CZ NH1 sing N N 87 ARG CZ NH2 doub N N 88 ARG NH1 HH11 sing N N 89 ARG NH1 HH12 sing N N 90 ARG NH2 HH21 sing N N 91 ARG NH2 HH22 sing N N 92 ARG OXT HXT sing N N 93 ASN N CA sing N N 94 ASN N H sing N N 95 ASN N H2 sing N N 96 ASN CA C sing N N 97 ASN CA CB sing N N 98 ASN CA HA sing N N 99 ASN C O doub N N 100 ASN C OXT sing N N 101 ASN CB CG sing N N 102 ASN CB HB2 sing N N 103 ASN CB HB3 sing N N 104 ASN CG OD1 doub N N 105 ASN CG ND2 sing N N 106 ASN ND2 HD21 sing N N 107 ASN ND2 HD22 sing N N 108 ASN OXT HXT sing N N 109 ASP N CA sing N N 110 ASP N H sing N N 111 ASP N H2 sing N N 112 ASP CA C sing N N 113 ASP CA CB sing N N 114 ASP CA HA sing N N 115 ASP C O doub N N 116 ASP C OXT sing N N 117 ASP CB CG sing N N 118 ASP CB HB2 sing N N 119 ASP CB HB3 sing N N 120 ASP CG OD1 doub N N 121 ASP CG OD2 sing N N 122 ASP OD2 HD2 sing N N 123 ASP OXT HXT sing N N 124 CYS N CA sing N N 125 CYS N H sing N N 126 CYS N H2 sing N N 127 CYS CA C sing N N 128 CYS CA CB sing N N 129 CYS CA HA sing N N 130 CYS C O doub N N 131 CYS C OXT sing N N 132 CYS CB SG sing N N 133 CYS CB HB2 sing N N 134 CYS CB HB3 sing N N 135 CYS SG HG sing N N 136 CYS OXT HXT sing N N 137 GLN N CA sing N N 138 GLN N H sing N N 139 GLN N H2 sing N N 140 GLN CA C sing N N 141 GLN CA CB sing N N 142 GLN CA HA sing N N 143 GLN C O doub N N 144 GLN C OXT sing N N 145 GLN CB CG sing N N 146 GLN CB HB2 sing N N 147 GLN CB HB3 sing N N 148 GLN CG CD sing N N 149 GLN CG HG2 sing N N 150 GLN CG HG3 sing N N 151 GLN CD OE1 doub N N 152 GLN CD NE2 sing N N 153 GLN NE2 HE21 sing N N 154 GLN NE2 HE22 sing N N 155 GLN OXT HXT sing N N 156 GLU N CA sing N N 157 GLU N H sing N N 158 GLU N H2 sing N N 159 GLU CA C sing N N 160 GLU CA CB sing N N 161 GLU CA HA sing N N 162 GLU C O doub N N 163 GLU C OXT sing N N 164 GLU CB CG sing N N 165 GLU CB HB2 sing N N 166 GLU CB HB3 sing N N 167 GLU CG CD sing N N 168 GLU CG HG2 sing N N 169 GLU CG HG3 sing N N 170 GLU CD OE1 doub N N 171 GLU CD OE2 sing N N 172 GLU OE2 HE2 sing N N 173 GLU OXT HXT sing N N 174 GLY N CA sing N N 175 GLY N H sing N N 176 GLY N H2 sing N N 177 GLY CA C sing N N 178 GLY CA HA2 sing N N 179 GLY CA HA3 sing N N 180 GLY C O doub N N 181 GLY C OXT sing N N 182 GLY OXT HXT sing N N 183 HIS N CA sing N N 184 HIS N H sing N N 185 HIS N H2 sing N N 186 HIS CA C sing N N 187 HIS CA CB sing N N 188 HIS CA HA sing N N 189 HIS C O doub N N 190 HIS C OXT sing N N 191 HIS CB CG sing N N 192 HIS CB HB2 sing N N 193 HIS CB HB3 sing N N 194 HIS CG ND1 sing Y N 195 HIS CG CD2 doub Y N 196 HIS ND1 CE1 doub Y N 197 HIS ND1 HD1 sing N N 198 HIS CD2 NE2 sing Y N 199 HIS CD2 HD2 sing N N 200 HIS CE1 NE2 sing Y N 201 HIS CE1 HE1 sing N N 202 HIS NE2 HE2 sing N N 203 HIS OXT HXT sing N N 204 ILE N CA sing N N 205 ILE N H sing N N 206 ILE N H2 sing N N 207 ILE CA C sing N N 208 ILE CA CB sing N N 209 ILE CA HA sing N N 210 ILE C O doub N N 211 ILE C OXT sing N N 212 ILE CB CG1 sing N N 213 ILE CB CG2 sing N N 214 ILE CB HB sing N N 215 ILE CG1 CD1 sing N N 216 ILE CG1 HG12 sing N N 217 ILE CG1 HG13 sing N N 218 ILE CG2 HG21 sing N N 219 ILE CG2 HG22 sing N N 220 ILE CG2 HG23 sing N N 221 ILE CD1 HD11 sing N N 222 ILE CD1 HD12 sing N N 223 ILE CD1 HD13 sing N N 224 ILE OXT HXT sing N N 225 LEU N CA sing N N 226 LEU N H sing N N 227 LEU N H2 sing N N 228 LEU CA C sing N N 229 LEU CA CB sing N N 230 LEU CA HA sing N N 231 LEU C O doub N N 232 LEU C OXT sing N N 233 LEU CB CG sing N N 234 LEU CB HB2 sing N N 235 LEU CB HB3 sing N N 236 LEU CG CD1 sing N N 237 LEU CG CD2 sing N N 238 LEU CG HG sing N N 239 LEU CD1 HD11 sing N N 240 LEU CD1 HD12 sing N N 241 LEU CD1 HD13 sing N N 242 LEU CD2 HD21 sing N N 243 LEU CD2 HD22 sing N N 244 LEU CD2 HD23 sing N N 245 LEU OXT HXT sing N N 246 LYS N CA sing N N 247 LYS N H sing N N 248 LYS N H2 sing N N 249 LYS CA C sing N N 250 LYS CA CB sing N N 251 LYS CA HA sing N N 252 LYS C O doub N N 253 LYS C OXT sing N N 254 LYS CB CG sing N N 255 LYS CB HB2 sing N N 256 LYS CB HB3 sing N N 257 LYS CG CD sing N N 258 LYS CG HG2 sing N N 259 LYS CG HG3 sing N N 260 LYS CD CE sing N N 261 LYS CD HD2 sing N N 262 LYS CD HD3 sing N N 263 LYS CE NZ sing N N 264 LYS CE HE2 sing N N 265 LYS CE HE3 sing N N 266 LYS NZ HZ1 sing N N 267 LYS NZ HZ2 sing N N 268 LYS NZ HZ3 sing N N 269 LYS OXT HXT sing N N 270 MET N CA sing N N 271 MET N H sing N N 272 MET N H2 sing N N 273 MET CA C sing N N 274 MET CA CB sing N N 275 MET CA HA sing N N 276 MET C O doub N N 277 MET C OXT sing N N 278 MET CB CG sing N N 279 MET CB HB2 sing N N 280 MET CB HB3 sing N N 281 MET CG SD sing N N 282 MET CG HG2 sing N N 283 MET CG HG3 sing N N 284 MET SD CE sing N N 285 MET CE HE1 sing N N 286 MET CE HE2 sing N N 287 MET CE HE3 sing N N 288 MET OXT HXT sing N N 289 PHE N CA sing N N 290 PHE N H sing N N 291 PHE N H2 sing N N 292 PHE CA C sing N N 293 PHE CA CB sing N N 294 PHE CA HA sing N N 295 PHE C O doub N N 296 PHE C OXT sing N N 297 PHE CB CG sing N N 298 PHE CB HB2 sing N N 299 PHE CB HB3 sing N N 300 PHE CG CD1 doub Y N 301 PHE CG CD2 sing Y N 302 PHE CD1 CE1 sing Y N 303 PHE CD1 HD1 sing N N 304 PHE CD2 CE2 doub Y N 305 PHE CD2 HD2 sing N N 306 PHE CE1 CZ doub Y N 307 PHE CE1 HE1 sing N N 308 PHE CE2 CZ sing Y N 309 PHE CE2 HE2 sing N N 310 PHE CZ HZ sing N N 311 PHE OXT HXT sing N N 312 PRO N CA sing N N 313 PRO N CD sing N N 314 PRO N H sing N N 315 PRO CA C sing N N 316 PRO CA CB sing N N 317 PRO CA HA sing N N 318 PRO C O doub N N 319 PRO C OXT sing N N 320 PRO CB CG sing N N 321 PRO CB HB2 sing N N 322 PRO CB HB3 sing N N 323 PRO CG CD sing N N 324 PRO CG HG2 sing N N 325 PRO CG HG3 sing N N 326 PRO CD HD2 sing N N 327 PRO CD HD3 sing N N 328 PRO OXT HXT sing N N 329 SER N CA sing N N 330 SER N H sing N N 331 SER N H2 sing N N 332 SER CA C sing N N 333 SER CA CB sing N N 334 SER CA HA sing N N 335 SER C O doub N N 336 SER C OXT sing N N 337 SER CB OG sing N N 338 SER CB HB2 sing N N 339 SER CB HB3 sing N N 340 SER OG HG sing N N 341 SER OXT HXT sing N N 342 THR N CA sing N N 343 THR N H sing N N 344 THR N H2 sing N N 345 THR CA C sing N N 346 THR CA CB sing N N 347 THR CA HA sing N N 348 THR C O doub N N 349 THR C OXT sing N N 350 THR CB OG1 sing N N 351 THR CB CG2 sing N N 352 THR CB HB sing N N 353 THR OG1 HG1 sing N N 354 THR CG2 HG21 sing N N 355 THR CG2 HG22 sing N N 356 THR CG2 HG23 sing N N 357 THR OXT HXT sing N N 358 TRP N CA sing N N 359 TRP N H sing N N 360 TRP N H2 sing N N 361 TRP CA C sing N N 362 TRP CA CB sing N N 363 TRP CA HA sing N N 364 TRP C O doub N N 365 TRP C OXT sing N N 366 TRP CB CG sing N N 367 TRP CB HB2 sing N N 368 TRP CB HB3 sing N N 369 TRP CG CD1 doub Y N 370 TRP CG CD2 sing Y N 371 TRP CD1 NE1 sing Y N 372 TRP CD1 HD1 sing N N 373 TRP CD2 CE2 doub Y N 374 TRP CD2 CE3 sing Y N 375 TRP NE1 CE2 sing Y N 376 TRP NE1 HE1 sing N N 377 TRP CE2 CZ2 sing Y N 378 TRP CE3 CZ3 doub Y N 379 TRP CE3 HE3 sing N N 380 TRP CZ2 CH2 doub Y N 381 TRP CZ2 HZ2 sing N N 382 TRP CZ3 CH2 sing Y N 383 TRP CZ3 HZ3 sing N N 384 TRP CH2 HH2 sing N N 385 TRP OXT HXT sing N N 386 TYR N CA sing N N 387 TYR N H sing N N 388 TYR N H2 sing N N 389 TYR CA C sing N N 390 TYR CA CB sing N N 391 TYR CA HA sing N N 392 TYR C O doub N N 393 TYR C OXT sing N N 394 TYR CB CG sing N N 395 TYR CB HB2 sing N N 396 TYR CB HB3 sing N N 397 TYR CG CD1 doub Y N 398 TYR CG CD2 sing Y N 399 TYR CD1 CE1 sing Y N 400 TYR CD1 HD1 sing N N 401 TYR CD2 CE2 doub Y N 402 TYR CD2 HD2 sing N N 403 TYR CE1 CZ doub Y N 404 TYR CE1 HE1 sing N N 405 TYR CE2 CZ sing Y N 406 TYR CE2 HE2 sing N N 407 TYR CZ OH sing N N 408 TYR OH HH sing N N 409 TYR OXT HXT sing N N 410 VAL N CA sing N N 411 VAL N H sing N N 412 VAL N H2 sing N N 413 VAL CA C sing N N 414 VAL CA CB sing N N 415 VAL CA HA sing N N 416 VAL C O doub N N 417 VAL C OXT sing N N 418 VAL CB CG1 sing N N 419 VAL CB CG2 sing N N 420 VAL CB HB sing N N 421 VAL CG1 HG11 sing N N 422 VAL CG1 HG12 sing N N 423 VAL CG1 HG13 sing N N 424 VAL CG2 HG21 sing N N 425 VAL CG2 HG22 sing N N 426 VAL CG2 HG23 sing N N 427 VAL OXT HXT sing N N 428 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 '5-bromo-2-{[3-(octyloxy)benzyl]sulfanyl}benzoic acid' 2CN # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3NPR _pdbx_initial_refinement_model.details 'PDB ENTRY 3NPR' #