data_3TWG # _entry.id 3TWG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3TWG RCSB RCSB068005 WWPDB D_1000068005 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3TWE . unspecified PDB 3TWf . unspecified # _pdbx_database_status.entry_id 3TWG _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-09-21 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Buer, B.C.' 1 'Meagher, J.L.' 2 'Stuckey, J.A.' 3 'Marsh, E.N.G.' 4 # _citation.id primary _citation.title 'Structural basis for the enhanced stability of highly fluorinated proteins.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 109 _citation.page_first 4810 _citation.page_last 4815 _citation.year 2012 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22411812 _citation.pdbx_database_id_DOI 10.1073/pnas.1120112109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Buer, B.C.' 1 primary 'Meagher, J.L.' 2 primary 'Stuckey, J.A.' 3 primary 'Marsh, E.N.' 4 # _cell.length_a 30.956 _cell.length_b 36.363 _cell.length_c 41.457 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3TWG _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 3TWG _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn alpha4F3af3d 3668.335 2 ? ? ? ? 2 water nat water 18.015 19 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'GNADE(3EG)YKE(6FL)ED(3EG)QER(6FL)RK(3EG)RKK(6FL)RSG' _entity_poly.pdbx_seq_one_letter_code_can GNADEXYKEXEDXQERXRKXRKKXRSG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 ALA n 1 4 ASP n 1 5 GLU n 1 6 3EG n 1 7 TYR n 1 8 LYS n 1 9 GLU n 1 10 6FL n 1 11 GLU n 1 12 ASP n 1 13 3EG n 1 14 GLN n 1 15 GLU n 1 16 ARG n 1 17 6FL n 1 18 ARG n 1 19 LYS n 1 20 3EG n 1 21 ARG n 1 22 LYS n 1 23 LYS n 1 24 6FL n 1 25 ARG n 1 26 SER n 1 27 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details synthesized # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3TWG _struct_ref.pdbx_db_accession 3TWG _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code GNADEXYKELEDXQERLRKXRKKLRSG _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3TWG A 1 ? 27 ? 3TWG 1 ? 27 ? 1 27 2 1 3TWG B 1 ? 27 ? 3TWG 1 ? 27 ? 1 27 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3EG 'L-peptide linking' . '(2S)-2-amino-4,4,4-trifluorobutanoic acid' ? 'C4 H6 F3 N O2' 157.091 6FL 'L-peptide linking' . "5,5,5,5',5',5'-hexafluoro-L-leucine" ? 'C6 H7 F6 N O2' 239.116 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # _exptl.crystals_number 1 _exptl.entry_id 3TWG _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 32.65 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.pdbx_details '48% PEG600, 0.1M Tris pH 8.5, vapor diffusion, hanging drop, temperature 293.15K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2011-06-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Diamond [111]' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97872 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.pdbx_wavelength_list 0.97872 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-F # _reflns.entry_id 3TWG _reflns.d_resolution_high 1.720 _reflns.d_resolution_low 50.000 _reflns.number_obs 5280 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_netI_over_sigmaI 11.600 _reflns.pdbx_chi_squared 0.816 _reflns.pdbx_redundancy 10.300 _reflns.percent_possible_obs 99.300 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.number_all 5317 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.720 1.750 ? ? ? 0.523 ? ? 0.486 10.700 ? 243 100.000 1 1 1.750 1.780 ? ? ? 0.425 ? ? 0.470 10.600 ? 262 100.000 2 1 1.780 1.820 ? ? ? 0.358 ? ? 0.496 10.700 ? 265 100.000 3 1 1.820 1.850 ? ? ? 0.270 ? ? 0.489 10.600 ? 255 100.000 4 1 1.850 1.890 ? ? ? 0.230 ? ? 0.521 10.700 ? 254 100.000 5 1 1.890 1.940 ? ? ? 0.175 ? ? 0.517 10.700 ? 261 100.000 6 1 1.940 1.990 ? ? ? 0.127 ? ? 0.607 10.500 ? 264 100.000 7 1 1.990 2.040 ? ? ? 0.116 ? ? 0.620 10.900 ? 262 100.000 8 1 2.040 2.100 ? ? ? 0.086 ? ? 0.673 10.500 ? 250 100.000 9 1 2.100 2.170 ? ? ? 0.071 ? ? 0.811 10.700 ? 270 100.000 10 1 2.170 2.240 ? ? ? 0.062 ? ? 1.059 10.700 ? 259 100.000 11 1 2.240 2.330 ? ? ? 0.056 ? ? 1.037 10.600 ? 265 100.000 12 1 2.330 2.440 ? ? ? 0.056 ? ? 1.143 10.400 ? 264 100.000 13 1 2.440 2.570 ? ? ? 0.059 ? ? 1.119 10.600 ? 262 100.000 14 1 2.570 2.730 ? ? ? 0.059 ? ? 1.118 10.200 ? 263 100.000 15 1 2.730 2.940 ? ? ? 0.057 ? ? 1.176 10.000 ? 268 100.000 16 1 2.940 3.240 ? ? ? 0.053 ? ? 0.944 9.600 ? 276 100.000 17 1 3.240 3.710 ? ? ? 0.039 ? ? 0.981 9.800 ? 278 100.000 18 1 3.710 4.670 ? ? ? 0.035 ? ? 1.118 9.400 ? 279 98.900 19 1 4.670 50.000 ? ? ? 0.034 ? ? 1.010 8.000 ? 280 89.500 20 1 # _refine.entry_id 3TWG _refine.ls_d_res_high 1.7200 _refine.ls_d_res_low 9.0800 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs ? _refine.ls_number_reflns_obs 5229 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2437 _refine.ls_R_factor_R_work 0.2413 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2898 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.5700 _refine.ls_number_reflns_R_free 239 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 45.8240 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.5418 _refine.aniso_B[2][2] 1.6988 _refine.aniso_B[3][3] -3.2407 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9316 _refine.correlation_coeff_Fo_to_Fc_free 0.9254 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'maximum likelihood' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 119.580 _refine.B_iso_min 21.590 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3TWG _refine_analyze.Luzzati_coordinate_error_obs 0.343 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 433 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 19 _refine_hist.number_atoms_total 452 _refine_hist.d_res_high 1.7200 _refine_hist.d_res_low 9.0800 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 157 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 14 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 62 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 462 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd 26 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 36 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 409 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 462 0.009 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 654 1.170 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 1.830 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 17.120 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.7200 _refine_ls_shell.d_res_low 1.9200 _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.number_reflns_R_work 1376 _refine_ls_shell.R_factor_all 0.2448 _refine_ls_shell.R_factor_R_work 0.2416 _refine_ls_shell.R_factor_R_free 0.3020 _refine_ls_shell.percent_reflns_R_free 5.3000 _refine_ls_shell.number_reflns_R_free 77 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1453 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3TWG _struct.title 'Crystal structure of the de novo designed fluorinated peptide alpha4F3af3d' _struct.pdbx_descriptor alpha4F3af3d _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TWG _struct_keywords.text 'alpha helix, de novo designed, fluorinated protein, UNKNOWN FUNCTION' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 3EG A 6 ? LYS A 23 ? 3EG A 6 LYS A 23 1 ? 18 HELX_P HELX_P2 2 ASN B 2 ? ARG B 25 ? ASN B 2 ARG B 25 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLU 9 C ? ? ? 1_555 A 6FL 10 N ? ? A GLU 9 A 6FL 10 1_555 ? ? ? ? ? ? ? 1.348 ? covale2 covale ? ? A 6FL 10 C ? ? ? 1_555 A GLU 11 N ? ? A 6FL 10 A GLU 11 1_555 ? ? ? ? ? ? ? 1.354 ? covale3 covale ? ? A ARG 16 C ? ? ? 1_555 A 6FL 17 N ? ? A ARG 16 A 6FL 17 1_555 ? ? ? ? ? ? ? 1.363 ? covale4 covale ? ? A 6FL 17 C ? ? ? 1_555 A ARG 18 N ? ? A 6FL 17 A ARG 18 1_555 ? ? ? ? ? ? ? 1.366 ? covale5 covale ? ? A LYS 23 C ? ? ? 1_555 A 6FL 24 N ? ? A LYS 23 A 6FL 24 1_555 ? ? ? ? ? ? ? 1.329 ? covale6 covale ? ? A 6FL 24 C ? ? ? 1_555 A ARG 25 N ? ? A 6FL 24 A ARG 25 1_555 ? ? ? ? ? ? ? 1.334 ? covale7 covale ? ? B GLU 9 C ? ? ? 1_555 B 6FL 10 N ? ? B GLU 9 B 6FL 10 1_555 ? ? ? ? ? ? ? 1.344 ? covale8 covale ? ? B 6FL 10 C ? ? ? 1_555 B GLU 11 N ? ? B 6FL 10 B GLU 11 1_555 ? ? ? ? ? ? ? 1.352 ? covale9 covale ? ? B ARG 16 C ? ? ? 1_555 B 6FL 17 N ? ? B ARG 16 B 6FL 17 1_555 ? ? ? ? ? ? ? 1.340 ? covale10 covale ? ? B 6FL 17 C ? ? ? 1_555 B ARG 18 N ? ? B 6FL 17 B ARG 18 1_555 ? ? ? ? ? ? ? 1.361 ? covale11 covale ? ? B LYS 23 C ? ? ? 1_555 B 6FL 24 N ? ? B LYS 23 B 6FL 24 1_555 ? ? ? ? ? ? ? 1.352 ? covale12 covale ? ? B 6FL 24 C ? ? ? 1_555 B ARG 25 N ? ? B 6FL 24 B ARG 25 1_555 ? ? ? ? ? ? ? 1.350 ? covale13 covale ? ? A GLU 5 C ? ? ? 1_555 A 3EG 6 N ? ? A GLU 5 A 3EG 6 1_555 ? ? ? ? ? ? ? 1.348 ? covale14 covale ? ? A 3EG 6 C ? ? ? 1_555 A TYR 7 N ? ? A 3EG 6 A TYR 7 1_555 ? ? ? ? ? ? ? 1.344 ? covale15 covale ? ? A ASP 12 C ? ? ? 1_555 A 3EG 13 N ? ? A ASP 12 A 3EG 13 1_555 ? ? ? ? ? ? ? 1.350 ? covale16 covale ? ? A 3EG 13 C ? ? ? 1_555 A GLN 14 N ? ? A 3EG 13 A GLN 14 1_555 ? ? ? ? ? ? ? 1.357 ? covale17 covale ? ? A LYS 19 C ? ? ? 1_555 A 3EG 20 N ? ? A LYS 19 A 3EG 20 1_555 ? ? ? ? ? ? ? 1.333 ? covale18 covale ? ? A 3EG 20 C ? ? ? 1_555 A ARG 21 N ? ? A 3EG 20 A ARG 21 1_555 ? ? ? ? ? ? ? 1.357 ? covale19 covale ? ? B GLU 5 C ? ? ? 1_555 B 3EG 6 N ? ? B GLU 5 B 3EG 6 1_555 ? ? ? ? ? ? ? 1.346 ? covale20 covale ? ? B 3EG 6 C ? ? ? 1_555 B TYR 7 N ? ? B 3EG 6 B TYR 7 1_555 ? ? ? ? ? ? ? 1.316 ? covale21 covale ? ? B ASP 12 C ? ? ? 1_555 B 3EG 13 N ? ? B ASP 12 B 3EG 13 1_555 ? ? ? ? ? ? ? 1.362 ? covale22 covale ? ? B 3EG 13 C ? ? ? 1_555 B GLN 14 N ? ? B 3EG 13 B GLN 14 1_555 ? ? ? ? ? ? ? 1.371 ? covale23 covale ? ? B LYS 19 C ? ? ? 1_555 B 3EG 20 N ? ? B LYS 19 B 3EG 20 1_555 ? ? ? ? ? ? ? 1.348 ? covale24 covale ? ? B 3EG 20 C ? ? ? 1_555 B ARG 21 N ? ? B 3EG 20 B ARG 21 1_555 ? ? ? ? ? ? ? 1.364 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 3TWG _atom_sites.fract_transf_matrix[1][1] 0.032304 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027500 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024121 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 ASN 2 2 ? ? ? A . n A 1 3 ALA 3 3 ? ? ? A . n A 1 4 ASP 4 4 ? ? ? A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 3EG 6 6 6 3EG 3EG A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 6FL 10 10 10 6FL 6FL A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 3EG 13 13 13 3EG 3EG A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 6FL 17 17 17 6FL 6FL A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 3EG 20 20 20 3EG 3EG A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 6FL 24 24 24 6FL 6FL A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLY 27 27 ? ? ? A . n B 1 1 GLY 1 1 1 GLY GLY B . n B 1 2 ASN 2 2 2 ASN ASN B . n B 1 3 ALA 3 3 3 ALA ALA B . n B 1 4 ASP 4 4 4 ASP ASP B . n B 1 5 GLU 5 5 5 GLU GLU B . n B 1 6 3EG 6 6 6 3EG 3EG B . n B 1 7 TYR 7 7 7 TYR TYR B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 GLU 9 9 9 GLU GLU B . n B 1 10 6FL 10 10 10 6FL 6FL B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 ASP 12 12 12 ASP ASP B . n B 1 13 3EG 13 13 13 3EG 3EG B . n B 1 14 GLN 14 14 14 GLN GLN B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 ARG 16 16 16 ARG ARG B . n B 1 17 6FL 17 17 17 6FL 6FL B . n B 1 18 ARG 18 18 18 ARG ARG B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 3EG 20 20 20 3EG 3EG B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 LYS 22 22 22 LYS LYS B . n B 1 23 LYS 23 23 23 LYS LYS B . n B 1 24 6FL 24 24 24 6FL 6FL B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 SER 26 26 ? ? ? B . n B 1 27 GLY 27 27 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 28 1 HOH HOH A . C 2 HOH 2 29 3 HOH HOH A . C 2 HOH 3 30 4 HOH HOH A . C 2 HOH 4 31 8 HOH HOH A . C 2 HOH 5 32 9 HOH HOH A . C 2 HOH 6 33 10 HOH HOH A . C 2 HOH 7 34 12 HOH HOH A . C 2 HOH 8 35 17 HOH HOH A . C 2 HOH 9 36 23 HOH HOH A . C 2 HOH 10 37 24 HOH HOH A . D 2 HOH 1 28 2 HOH HOH B . D 2 HOH 2 29 6 HOH HOH B . D 2 HOH 3 30 7 HOH HOH B . D 2 HOH 4 31 11 HOH HOH B . D 2 HOH 5 32 13 HOH HOH B . D 2 HOH 6 33 18 HOH HOH B . D 2 HOH 7 34 19 HOH HOH B . D 2 HOH 8 35 20 HOH HOH B . D 2 HOH 9 36 21 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? tetrameric 4 3 software_defined_assembly PISA monomeric 1 4 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2 A,B,C,D 3 1 A,C 4 1 B,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 35 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-14 2 'Structure model' 1 1 2012-04-04 3 'Structure model' 1 2 2012-04-18 4 'Structure model' 1 3 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -6.8312 0.0711 -3.3089 -0.1068 -0.0312 0.0140 0.0308 -0.0083 0.0260 8.0676 7.6659 5.2636 -1.8714 -0.1774 2.5931 0.1604 0.0223 -0.1827 -0.0032 -0.1583 0.2158 -0.1542 0.1910 0.0827 'X-RAY DIFFRACTION' 2 ? refined -0.9617 6.9567 -4.3834 -0.0273 -0.1371 -0.0088 0.0031 0.0808 0.0298 6.1349 4.7173 8.3155 2.1830 0.5530 0.9505 -0.0950 0.1683 -0.0733 0.2796 0.1065 -0.2009 -0.5292 0.1746 0.0808 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 5 A 26 '{ A|5 - A|26 }' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 B 25 '{ B|1 - B|25 }' ? ? ? ? ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 BUSTER-TNT 'BUSTER 2.8.0' ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MD2 . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 8 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 9 BUSTER 1.6.0 ? ? ? ? refinement ? ? ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 5 ? CG ? A GLU 5 CG 2 1 Y 1 A GLU 5 ? CD ? A GLU 5 CD 3 1 Y 1 A GLU 5 ? OE1 ? A GLU 5 OE1 4 1 Y 1 A GLU 5 ? OE2 ? A GLU 5 OE2 5 1 Y 1 A TYR 7 ? CG ? A TYR 7 CG 6 1 Y 1 A TYR 7 ? CD1 ? A TYR 7 CD1 7 1 Y 1 A TYR 7 ? CD2 ? A TYR 7 CD2 8 1 Y 1 A TYR 7 ? CE1 ? A TYR 7 CE1 9 1 Y 1 A TYR 7 ? CE2 ? A TYR 7 CE2 10 1 Y 1 A TYR 7 ? CZ ? A TYR 7 CZ 11 1 Y 1 A TYR 7 ? OH ? A TYR 7 OH 12 1 Y 1 A LYS 8 ? CG ? A LYS 8 CG 13 1 Y 1 A LYS 8 ? CD ? A LYS 8 CD 14 1 Y 1 A LYS 8 ? CE ? A LYS 8 CE 15 1 Y 1 A LYS 8 ? NZ ? A LYS 8 NZ 16 1 Y 1 A ARG 25 ? CG ? A ARG 25 CG 17 1 Y 1 A ARG 25 ? CD ? A ARG 25 CD 18 1 Y 1 A ARG 25 ? NE ? A ARG 25 NE 19 1 Y 1 A ARG 25 ? CZ ? A ARG 25 CZ 20 1 Y 1 A ARG 25 ? NH1 ? A ARG 25 NH1 21 1 Y 1 A ARG 25 ? NH2 ? A ARG 25 NH2 22 1 Y 1 A SER 26 ? OG ? A SER 26 OG 23 1 Y 1 B LYS 22 ? CG ? B LYS 22 CG 24 1 Y 1 B LYS 22 ? CD ? B LYS 22 CD 25 1 Y 1 B LYS 22 ? CE ? B LYS 22 CE 26 1 Y 1 B LYS 22 ? NZ ? B LYS 22 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A ASN 2 ? A ASN 2 3 1 Y 1 A ALA 3 ? A ALA 3 4 1 Y 1 A ASP 4 ? A ASP 4 5 1 Y 1 A GLY 27 ? A GLY 27 6 1 Y 1 B SER 26 ? B SER 26 7 1 Y 1 B GLY 27 ? B GLY 27 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #