HEADER HORMONE 27-OCT-11 3UDA TITLE CRYSTAL STRUCTURE ANALYSIS OF FGF1-DISACCHARIDE(NI24) COMPLEX CAVEAT 3UDA IDY D 1 HAS WRONG CHIRALITY AT ATOM C3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEPARIN-BINDING GROWTH FACTOR 1; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: HBGF-1, ACIDIC FIBROBLAST GROWTH FACTOR, AFGF, BETA- COMPND 5 ENDOTHELIAL CELL GROWTH FACTOR, ECGF-BETA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FGF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS HEPARIN/HEPARAN SULFATE BINDING, HORMONE EXPDTA X-RAY DIFFRACTION AUTHOR S.-C.HUNG,Z.SHI REVDAT 4 20-MAR-24 3UDA 1 HETSYN REVDAT 3 29-JUL-20 3UDA 1 CAVEAT COMPND REMARK SEQADV REVDAT 3 2 1 HETNAM LINK SITE ATOM REVDAT 2 16-JAN-13 3UDA 1 JRNL REVDAT 1 28-NOV-12 3UDA 0 JRNL AUTH Y.-P.HU,Y.-Q.ZHONG,Z.-G.CHEN,C.-Y.CHEN,Z.SHI,M.M.L.ZULUETA, JRNL AUTH 2 C.-C.KU,P.-Y.LEE,C.-C.WANG,S.-C.HUNG JRNL TITL DIVERGENT SYNTHESIS OF 48 HEPARAN SULFATE-BASED JRNL TITL 2 DISACCHARIDES AND PROBING THE SPECIFIC SUGAR-FIBROBLAST JRNL TITL 3 GROWTH FACTOR-1 INTERACTION JRNL REF J.AM.CHEM.SOC. V. 134 20722 2012 JRNL REFN ISSN 0002-7863 JRNL PMID 23240683 JRNL DOI 10.1021/JA3090065 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 11934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1334 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.51 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 733 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 79 REMARK 3 BIN FREE R VALUE : 0.3400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3047 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 32 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.28000 REMARK 3 B22 (A**2) : 7.57000 REMARK 3 B33 (A**2) : -5.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.68000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.376 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.263 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.212 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3170 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4278 ; 1.475 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 379 ; 8.384 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 150 ;38.568 ;24.200 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 550 ;21.323 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;23.118 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 456 ; 0.176 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2370 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1893 ; 0.846 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3034 ; 1.538 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1277 ; 2.160 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1244 ; 3.433 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 136 REMARK 3 ORIGIN FOR THE GROUP (A): -22.3313 -0.2568 -9.0179 REMARK 3 T TENSOR REMARK 3 T11: 0.1593 T22: 0.0318 REMARK 3 T33: 0.1344 T12: 0.0232 REMARK 3 T13: 0.0149 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.4461 L22: 2.9809 REMARK 3 L33: 3.4452 L12: -0.4918 REMARK 3 L13: -0.7610 L23: 0.4473 REMARK 3 S TENSOR REMARK 3 S11: 0.0785 S12: 0.1490 S13: 0.0043 REMARK 3 S21: 0.0971 S22: -0.1216 S23: -0.0807 REMARK 3 S31: -0.0474 S32: -0.0573 S33: 0.0431 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 11 B 137 REMARK 3 ORIGIN FOR THE GROUP (A): -9.4164 -4.6744 17.6631 REMARK 3 T TENSOR REMARK 3 T11: 0.1264 T22: 0.1016 REMARK 3 T33: 0.1281 T12: 0.0053 REMARK 3 T13: -0.0216 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 3.4557 L22: 1.8945 REMARK 3 L33: 1.4978 L12: -0.5411 REMARK 3 L13: -0.5109 L23: 0.9666 REMARK 3 S TENSOR REMARK 3 S11: 0.0507 S12: 0.2059 S13: 0.0420 REMARK 3 S21: 0.0216 S22: -0.0252 S23: -0.0639 REMARK 3 S31: -0.0487 S32: -0.0368 S33: -0.0255 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 10 C 138 REMARK 3 ORIGIN FOR THE GROUP (A): 13.5609 -17.5276 31.0121 REMARK 3 T TENSOR REMARK 3 T11: 0.1369 T22: 0.0795 REMARK 3 T33: 0.1383 T12: 0.0216 REMARK 3 T13: -0.0111 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 1.3537 L22: 1.4735 REMARK 3 L33: 3.1930 L12: 0.0407 REMARK 3 L13: -0.4319 L23: -0.7877 REMARK 3 S TENSOR REMARK 3 S11: 0.0603 S12: 0.0112 S13: -0.0211 REMARK 3 S21: -0.0488 S22: -0.0049 S23: 0.0587 REMARK 3 S31: 0.1087 S32: 0.0155 S33: -0.0554 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 141 A 147 REMARK 3 RESIDUE RANGE : C 144 C 156 REMARK 3 RESIDUE RANGE : B 143 B 154 REMARK 3 ORIGIN FOR THE GROUP (A): -7.6291 -7.0250 17.7308 REMARK 3 T TENSOR REMARK 3 T11: 0.3630 T22: 0.0160 REMARK 3 T33: 0.4095 T12: -0.0189 REMARK 3 T13: -0.0049 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.1670 L22: 0.2968 REMARK 3 L33: 0.2815 L12: -0.2175 REMARK 3 L13: 0.1463 L23: -0.2198 REMARK 3 S TENSOR REMARK 3 S11: 0.0574 S12: 0.0448 S13: -0.0415 REMARK 3 S21: -0.0293 S22: -0.0661 S23: 0.0168 REMARK 3 S31: 0.0312 S32: 0.0485 S33: 0.0088 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 141 C 143 REMARK 3 ORIGIN FOR THE GROUP (A): 9.8923 -29.5622 27.3636 REMARK 3 T TENSOR REMARK 3 T11: 0.2744 T22: 0.6716 REMARK 3 T33: 0.4163 T12: -0.0378 REMARK 3 T13: -0.0634 T23: 0.0441 REMARK 3 L TENSOR REMARK 3 L11: 7.1536 L22: 16.4354 REMARK 3 L33: 50.4276 L12: -9.6194 REMARK 3 L13: -14.7940 L23: 11.5991 REMARK 3 S TENSOR REMARK 3 S11: 0.3579 S12: 0.5661 S13: -0.1269 REMARK 3 S21: -1.0117 S22: -1.2356 S23: -0.1583 REMARK 3 S31: 0.1080 S32: -0.5411 S33: 0.8777 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 141 B 142 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0207 11.5815 17.6694 REMARK 3 T TENSOR REMARK 3 T11: 0.5206 T22: 0.2522 REMARK 3 T33: 0.5576 T12: -0.0282 REMARK 3 T13: 0.1866 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 23.4629 L22: 33.8887 REMARK 3 L33: 26.1458 L12: -3.3138 REMARK 3 L13: 20.7921 L23: -18.9933 REMARK 3 S TENSOR REMARK 3 S11: -0.3277 S12: -0.1482 S13: -0.5389 REMARK 3 S21: 1.6633 S22: 0.6698 S23: -0.3640 REMARK 3 S31: -1.0866 S32: -0.4575 S33: -0.3421 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3UDA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068609. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13268 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.510 REMARK 200 RESOLUTION RANGE LOW (A) : 78.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : 0.05800 REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.28800 REMARK 200 R SYM FOR SHELL (I) : 0.28800 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M (NH4)HPO4, 0.1M SODIUM ACETATE, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.81500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.99050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.81500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.99050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 PHE A 1 REMARK 465 ASN A 2 REMARK 465 LEU A 3 REMARK 465 PRO A 4 REMARK 465 PRO A 5 REMARK 465 GLY A 6 REMARK 465 ASN A 7 REMARK 465 TYR A 8 REMARK 465 LYS A 9 REMARK 465 LYS A 10 REMARK 465 VAL A 137 REMARK 465 SER A 138 REMARK 465 SER A 139 REMARK 465 ASP A 140 REMARK 465 MET B 0 REMARK 465 PHE B 1 REMARK 465 ASN B 2 REMARK 465 LEU B 3 REMARK 465 PRO B 4 REMARK 465 PRO B 5 REMARK 465 GLY B 6 REMARK 465 ASN B 7 REMARK 465 TYR B 8 REMARK 465 LYS B 9 REMARK 465 LYS B 10 REMARK 465 SER B 138 REMARK 465 SER B 139 REMARK 465 ASP B 140 REMARK 465 MET C 0 REMARK 465 PHE C 1 REMARK 465 ASN C 2 REMARK 465 LEU C 3 REMARK 465 PRO C 4 REMARK 465 PRO C 5 REMARK 465 GLY C 6 REMARK 465 ASN C 7 REMARK 465 TYR C 8 REMARK 465 LYS C 9 REMARK 465 SER C 139 REMARK 465 ASP C 140 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU B 91 N HIS B 93 1.94 REMARK 500 O ASP A 39 N HIS A 41 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 37 OE1 GLN A 63 4445 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 41.01 -94.46 REMARK 500 GLN A 40 -39.88 42.08 REMARK 500 GLU A 81 -39.90 -36.29 REMARK 500 GLU A 90 -155.87 -91.68 REMARK 500 GLU A 91 -72.54 -80.21 REMARK 500 ASN A 92 -42.27 92.43 REMARK 500 HIS A 93 -5.71 76.65 REMARK 500 GLU A 104 3.07 -70.00 REMARK 500 ASN A 106 40.16 73.48 REMARK 500 ASP B 32 -170.13 -174.32 REMARK 500 ASP B 68 -156.49 -85.21 REMARK 500 GLU B 91 -154.24 41.04 REMARK 500 ASN B 92 -28.51 40.33 REMARK 500 HIS B 93 -3.34 81.12 REMARK 500 ASN B 106 45.04 83.43 REMARK 500 CYS B 117 145.16 -33.81 REMARK 500 GLU C 49 -109.28 -92.57 REMARK 500 SER C 50 -156.53 -56.76 REMARK 500 GLU C 82 3.93 -67.78 REMARK 500 ASN C 92 34.46 -97.09 REMARK 500 CYS C 117 134.89 -36.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 90 GLU A 91 -149.01 REMARK 500 GLU A 91 ASN A 92 30.62 REMARK 500 HIS B 93 TYR B 94 144.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UD7 RELATED DB: PDB REMARK 900 RELATED ID: 3UD8 RELATED DB: PDB REMARK 900 RELATED ID: 3UD9 RELATED DB: PDB DBREF 3UDA A 1 140 UNP P05230 FGF1_HUMAN 16 155 DBREF 3UDA B 1 140 UNP P05230 FGF1_HUMAN 16 155 DBREF 3UDA C 1 140 UNP P05230 FGF1_HUMAN 16 155 SEQADV 3UDA MET A 0 UNP P05230 EXPRESSION TAG SEQADV 3UDA MET B 0 UNP P05230 EXPRESSION TAG SEQADV 3UDA MET C 0 UNP P05230 EXPRESSION TAG SEQRES 1 A 141 MET PHE ASN LEU PRO PRO GLY ASN TYR LYS LYS PRO LYS SEQRES 2 A 141 LEU LEU TYR CYS SER ASN GLY GLY HIS PHE LEU ARG ILE SEQRES 3 A 141 LEU PRO ASP GLY THR VAL ASP GLY THR ARG ASP ARG SER SEQRES 4 A 141 ASP GLN HIS ILE GLN LEU GLN LEU SER ALA GLU SER VAL SEQRES 5 A 141 GLY GLU VAL TYR ILE LYS SER THR GLU THR GLY GLN TYR SEQRES 6 A 141 LEU ALA MET ASP THR ASP GLY LEU LEU TYR GLY SER GLN SEQRES 7 A 141 THR PRO ASN GLU GLU CYS LEU PHE LEU GLU ARG LEU GLU SEQRES 8 A 141 GLU ASN HIS TYR ASN THR TYR ILE SER LYS LYS HIS ALA SEQRES 9 A 141 GLU LYS ASN TRP PHE VAL GLY LEU LYS LYS ASN GLY SER SEQRES 10 A 141 CYS LYS ARG GLY PRO ARG THR HIS TYR GLY GLN LYS ALA SEQRES 11 A 141 ILE LEU PHE LEU PRO LEU PRO VAL SER SER ASP SEQRES 1 B 141 MET PHE ASN LEU PRO PRO GLY ASN TYR LYS LYS PRO LYS SEQRES 2 B 141 LEU LEU TYR CYS SER ASN GLY GLY HIS PHE LEU ARG ILE SEQRES 3 B 141 LEU PRO ASP GLY THR VAL ASP GLY THR ARG ASP ARG SER SEQRES 4 B 141 ASP GLN HIS ILE GLN LEU GLN LEU SER ALA GLU SER VAL SEQRES 5 B 141 GLY GLU VAL TYR ILE LYS SER THR GLU THR GLY GLN TYR SEQRES 6 B 141 LEU ALA MET ASP THR ASP GLY LEU LEU TYR GLY SER GLN SEQRES 7 B 141 THR PRO ASN GLU GLU CYS LEU PHE LEU GLU ARG LEU GLU SEQRES 8 B 141 GLU ASN HIS TYR ASN THR TYR ILE SER LYS LYS HIS ALA SEQRES 9 B 141 GLU LYS ASN TRP PHE VAL GLY LEU LYS LYS ASN GLY SER SEQRES 10 B 141 CYS LYS ARG GLY PRO ARG THR HIS TYR GLY GLN LYS ALA SEQRES 11 B 141 ILE LEU PHE LEU PRO LEU PRO VAL SER SER ASP SEQRES 1 C 141 MET PHE ASN LEU PRO PRO GLY ASN TYR LYS LYS PRO LYS SEQRES 2 C 141 LEU LEU TYR CYS SER ASN GLY GLY HIS PHE LEU ARG ILE SEQRES 3 C 141 LEU PRO ASP GLY THR VAL ASP GLY THR ARG ASP ARG SER SEQRES 4 C 141 ASP GLN HIS ILE GLN LEU GLN LEU SER ALA GLU SER VAL SEQRES 5 C 141 GLY GLU VAL TYR ILE LYS SER THR GLU THR GLY GLN TYR SEQRES 6 C 141 LEU ALA MET ASP THR ASP GLY LEU LEU TYR GLY SER GLN SEQRES 7 C 141 THR PRO ASN GLU GLU CYS LEU PHE LEU GLU ARG LEU GLU SEQRES 8 C 141 GLU ASN HIS TYR ASN THR TYR ILE SER LYS LYS HIS ALA SEQRES 9 C 141 GLU LYS ASN TRP PHE VAL GLY LEU LYS LYS ASN GLY SER SEQRES 10 C 141 CYS LYS ARG GLY PRO ARG THR HIS TYR GLY GLN LYS ALA SEQRES 11 C 141 ILE LEU PHE LEU PRO LEU PRO VAL SER SER ASP HET IDY D 1 18 HET SUS D 2 23 HET PO4 C 141 5 HET PO4 C 142 5 HET PO4 C 143 5 HETNAM IDY 1-O-METHYL-2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID HETNAM SUS 2-DEOXY-3,6-DI-O-SULFO-2-(SULFOAMINO)-ALPHA-D- HETNAM 2 SUS GLUCOPYRANOSE HETNAM PO4 PHOSPHATE ION HETSYN IDY METHYL 2-O-SULFO-ALPHA-L-IDOPYRANOSIDURONIC ACID; 1-O- HETSYN 2 IDY METHYL-2-O-SULFO-ALPHA-L-IDURONIC ACID; 1-O-METHYL-2- HETSYN 3 IDY O-SULFO-L-IDURONIC ACID; 1-O-METHYL-2-O-SULFO-IDURONIC HETSYN 4 IDY ACID HETSYN SUS 3,6-DI-O-SULFO-N-SULFO-ALPHA-D-GLUCOSAMINE; 2-DEOXY-3, HETSYN 2 SUS 6-DI-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOSE; 2-DEOXY- HETSYN 3 SUS 3,6-DI-O-SULFO-2-(SULFOAMINO)-D-GLUCOSE; 2-DEOXY-3,6- HETSYN 4 SUS DI-O-SULFO-2-(SULFOAMINO)-GLUCOSE FORMUL 4 IDY C7 H12 O10 S FORMUL 4 SUS C6 H13 N O14 S3 FORMUL 5 PO4 3(O4 P 3-) FORMUL 8 HOH *32(H2 O) HELIX 1 1 ASN A 80 CYS A 83 5 4 HELIX 2 2 LYS A 101 ASN A 106 5 6 HELIX 3 3 ARG A 119 THR A 123 5 5 HELIX 4 4 GLN A 127 ILE A 130 5 4 HELIX 5 5 ASN B 80 GLU B 82 5 3 HELIX 6 6 ARG B 119 THR B 123 5 5 HELIX 7 7 GLN B 127 ILE B 130 5 4 HELIX 8 8 ASN C 80 GLU C 82 5 3 HELIX 9 9 HIS C 102 ASN C 106 5 5 HELIX 10 10 ARG C 119 THR C 123 5 5 HELIX 11 11 GLN C 127 ILE C 130 5 4 SHEET 1 A 4 VAL A 31 THR A 34 0 SHEET 2 A 4 HIS A 21 ILE A 25 -1 N ARG A 24 O ASP A 32 SHEET 3 A 4 LEU A 13 CYS A 16 -1 N CYS A 16 O HIS A 21 SHEET 4 A 4 PHE A 132 LEU A 135 -1 O LEU A 135 N LEU A 13 SHEET 1 B 4 LEU A 44 SER A 50 0 SHEET 2 B 4 GLU A 53 SER A 58 -1 O LYS A 57 N GLN A 45 SHEET 3 B 4 PHE A 85 LEU A 89 -1 O PHE A 85 N VAL A 54 SHEET 4 B 4 ASN A 95 SER A 99 -1 O ILE A 98 N LEU A 86 SHEET 1 C 2 TYR A 64 MET A 67 0 SHEET 2 C 2 LEU A 73 SER A 76 -1 O SER A 76 N TYR A 64 SHEET 1 D 2 LYS B 12 CYS B 16 0 SHEET 2 D 2 PHE B 132 PRO B 136 -1 O LEU B 135 N LEU B 13 SHEET 1 E 2 PHE B 22 ILE B 25 0 SHEET 2 E 2 VAL B 31 THR B 34 -1 O THR B 34 N PHE B 22 SHEET 1 F 4 LEU B 44 SER B 50 0 SHEET 2 F 4 GLU B 53 SER B 58 -1 O LYS B 57 N GLN B 45 SHEET 3 F 4 LEU B 84 LEU B 89 -1 O PHE B 85 N VAL B 54 SHEET 4 F 4 ASN B 95 SER B 99 -1 O ILE B 98 N LEU B 86 SHEET 1 G 2 TYR B 64 MET B 67 0 SHEET 2 G 2 LEU B 73 SER B 76 -1 O SER B 76 N TYR B 64 SHEET 1 H 2 LEU C 13 CYS C 16 0 SHEET 2 H 2 PHE C 132 LEU C 135 -1 O LEU C 133 N TYR C 15 SHEET 1 I 2 PHE C 22 ILE C 25 0 SHEET 2 I 2 VAL C 31 THR C 34 -1 O THR C 34 N PHE C 22 SHEET 1 J 4 LEU C 44 ALA C 48 0 SHEET 2 J 4 GLU C 53 SER C 58 -1 O LYS C 57 N GLN C 45 SHEET 3 J 4 LEU C 84 LEU C 89 -1 O PHE C 85 N VAL C 54 SHEET 4 J 4 ASN C 95 SER C 99 -1 O ILE C 98 N LEU C 86 SHEET 1 K 2 TYR C 64 MET C 67 0 SHEET 2 K 2 LEU C 73 SER C 76 -1 O TYR C 74 N ALA C 66 LINK O4 IDY D 1 C1 SUS D 2 1555 1555 1.41 CISPEP 1 TYR C 125 GLY C 126 0 -0.07 CRYST1 113.630 45.981 96.558 90.00 125.68 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008800 0.000000 0.006319 0.00000 SCALE2 0.000000 0.021748 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012750 0.00000