HEADER TRANSFERASE 31-OCT-11 3UF6 TITLE THE CRYSTAL STRUCTURE OF A POSSIBLE PHOSPHATE ACETYL/BUTARYL TITLE 2 TRANSFERASE (FROM LISTERIA MONOCYTOGENES EGD-E) IN COMPLEX WITH COD TITLE 3 (3'-DEPHOSPHOCOENZYME A) COMPND MOL_ID: 1; COMPND 2 MOLECULE: LMO1369 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: POSSIBLE PHOSPHATE ACETYL/BUTARYL TRANSFERASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 169963; SOURCE 4 STRAIN: EGD-E; SOURCE 5 GENE: LMO1369; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) MAJIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, THE CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, UNKNOWN FUNCTION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,M.ZHOU,K.KWON,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 06-DEC-23 3UF6 1 REMARK REVDAT 2 13-SEP-23 3UF6 1 REMARK SEQADV LINK REVDAT 1 16-NOV-11 3UF6 0 JRNL AUTH K.TAN,M.ZHOU,K.KWON,W.F.ANDERSON,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A POSSIBLE PHOSPHATE ACETYL/BUTARYL JRNL TITL 2 TRANSFERASE (FROM LISTERIA MONOCYTOGENES EGD-E) IN COMPLEX JRNL TITL 3 WITH COD (3'-DEPHOSPHOCOENZYME A) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 44366 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2234 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.0319 - 4.5293 0.99 2674 149 0.1584 0.1863 REMARK 3 2 4.5293 - 3.5966 1.00 2653 149 0.1346 0.1605 REMARK 3 3 3.5966 - 3.1424 1.00 2643 134 0.1523 0.1778 REMARK 3 4 3.1424 - 2.8553 1.00 2672 126 0.1710 0.1989 REMARK 3 5 2.8553 - 2.6508 1.00 2631 149 0.1843 0.2573 REMARK 3 6 2.6508 - 2.4945 1.00 2662 135 0.1838 0.2394 REMARK 3 7 2.4945 - 2.3697 1.00 2634 134 0.1654 0.2428 REMARK 3 8 2.3697 - 2.2665 1.00 2647 138 0.1597 0.1946 REMARK 3 9 2.2665 - 2.1793 1.00 2618 156 0.1559 0.2318 REMARK 3 10 2.1793 - 2.1041 1.00 2584 157 0.1652 0.2263 REMARK 3 11 2.1041 - 2.0383 1.00 2653 130 0.1716 0.2318 REMARK 3 12 2.0383 - 1.9801 1.00 2616 133 0.1579 0.2072 REMARK 3 13 1.9801 - 1.9280 1.00 2646 144 0.1712 0.2106 REMARK 3 14 1.9280 - 1.8809 0.99 2617 149 0.1777 0.2702 REMARK 3 15 1.8809 - 1.8382 0.99 2609 131 0.1994 0.2545 REMARK 3 16 1.8382 - 1.7991 0.97 2573 120 0.2140 0.2903 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 40.84 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.85340 REMARK 3 B22 (A**2) : -1.08650 REMARK 3 B33 (A**2) : 0.23310 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.04480 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4474 REMARK 3 ANGLE : 1.057 6103 REMARK 3 CHIRALITY : 0.073 761 REMARK 3 PLANARITY : 0.004 762 REMARK 3 DIHEDRAL : 12.733 1647 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 3:38) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9703 33.4533 56.3039 REMARK 3 T TENSOR REMARK 3 T11: 0.1127 T22: 0.0905 REMARK 3 T33: 0.0741 T12: -0.0216 REMARK 3 T13: -0.0340 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 1.6117 L22: 1.2257 REMARK 3 L33: 1.4808 L12: -0.3439 REMARK 3 L13: -0.4108 L23: 0.2857 REMARK 3 S TENSOR REMARK 3 S11: -0.0218 S12: 0.2772 S13: -0.0232 REMARK 3 S21: -0.3836 S22: -0.0039 S23: 0.1336 REMARK 3 S31: -0.1100 S32: -0.0681 S33: 0.0318 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 39:55) REMARK 3 ORIGIN FOR THE GROUP (A): -30.0411 41.3863 65.1574 REMARK 3 T TENSOR REMARK 3 T11: 0.0819 T22: 0.1134 REMARK 3 T33: 0.1474 T12: 0.0258 REMARK 3 T13: -0.0248 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 2.0886 L22: 2.0040 REMARK 3 L33: 3.6924 L12: -0.1532 REMARK 3 L13: 0.8665 L23: 1.2014 REMARK 3 S TENSOR REMARK 3 S11: -0.0740 S12: 0.0258 S13: 0.2890 REMARK 3 S21: -0.2455 S22: -0.1299 S23: 0.4037 REMARK 3 S31: -0.4670 S32: -0.3491 S33: 0.1000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 56:132) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4001 34.6360 66.4171 REMARK 3 T TENSOR REMARK 3 T11: 0.0208 T22: 0.0800 REMARK 3 T33: 0.0522 T12: -0.0120 REMARK 3 T13: -0.0180 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.7691 L22: 0.7272 REMARK 3 L33: 0.9600 L12: -0.0695 REMARK 3 L13: -0.5755 L23: 0.2691 REMARK 3 S TENSOR REMARK 3 S11: -0.0389 S12: -0.1525 S13: -0.0004 REMARK 3 S21: 0.1260 S22: 0.0108 S23: 0.0422 REMARK 3 S31: 0.0009 S32: 0.1829 S33: -0.0139 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 133:159) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2879 25.5549 60.8267 REMARK 3 T TENSOR REMARK 3 T11: 0.0713 T22: 0.1193 REMARK 3 T33: 0.0319 T12: 0.0295 REMARK 3 T13: 0.0172 T23: 0.0343 REMARK 3 L TENSOR REMARK 3 L11: 3.1252 L22: 3.2484 REMARK 3 L33: 2.2633 L12: 1.0902 REMARK 3 L13: 1.2037 L23: 0.3373 REMARK 3 S TENSOR REMARK 3 S11: 0.0352 S12: -0.1585 S13: 0.0003 REMARK 3 S21: 0.1531 S22: -0.0603 S23: 0.0076 REMARK 3 S31: 0.0414 S32: 0.1051 S33: 0.0075 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 160:192) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1120 20.8987 52.8374 REMARK 3 T TENSOR REMARK 3 T11: 0.1077 T22: 0.0586 REMARK 3 T33: 0.0855 T12: 0.0486 REMARK 3 T13: 0.0212 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 2.6193 L22: 1.7874 REMARK 3 L33: 1.5207 L12: 0.1408 REMARK 3 L13: -0.4122 L23: -0.8305 REMARK 3 S TENSOR REMARK 3 S11: -0.2227 S12: -0.1680 S13: -0.2303 REMARK 3 S21: -0.0397 S22: -0.0154 S23: -0.2173 REMARK 3 S31: 0.1515 S32: 0.0954 S33: 0.1990 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 193:216) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8249 17.2817 44.4492 REMARK 3 T TENSOR REMARK 3 T11: 0.1689 T22: 0.0750 REMARK 3 T33: 0.1581 T12: 0.0258 REMARK 3 T13: 0.0342 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 3.1445 L22: 2.3479 REMARK 3 L33: 1.3522 L12: 0.1465 REMARK 3 L13: 0.1708 L23: 0.1383 REMARK 3 S TENSOR REMARK 3 S11: -0.0705 S12: -0.1200 S13: -0.4010 REMARK 3 S21: -0.0025 S22: 0.0488 S23: 0.0142 REMARK 3 S31: 0.4712 S32: -0.0146 S33: -0.0745 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 217:233) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3005 19.0624 47.0000 REMARK 3 T TENSOR REMARK 3 T11: 0.1436 T22: 0.0637 REMARK 3 T33: 0.1395 T12: 0.0181 REMARK 3 T13: 0.0173 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.4718 L22: 0.1296 REMARK 3 L33: 2.2960 L12: -0.2041 REMARK 3 L13: -0.6815 L23: -0.3535 REMARK 3 S TENSOR REMARK 3 S11: -0.1173 S12: 0.0861 S13: -0.3865 REMARK 3 S21: -0.1251 S22: -0.0192 S23: -0.0303 REMARK 3 S31: 0.5351 S32: 0.0096 S33: 0.0351 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 234:271) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9685 34.9682 53.0793 REMARK 3 T TENSOR REMARK 3 T11: 0.0492 T22: 0.0623 REMARK 3 T33: 0.0459 T12: 0.0067 REMARK 3 T13: -0.0054 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.2162 L22: 0.3989 REMARK 3 L33: 3.1385 L12: -0.0387 REMARK 3 L13: -0.7570 L23: -0.5019 REMARK 3 S TENSOR REMARK 3 S11: 0.0408 S12: -0.0370 S13: 0.1106 REMARK 3 S21: -0.0052 S22: 0.0331 S23: 0.0138 REMARK 3 S31: -0.0664 S32: -0.1937 S33: -0.0668 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 272:287) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3665 29.9552 56.2788 REMARK 3 T TENSOR REMARK 3 T11: -0.0092 T22: 0.0725 REMARK 3 T33: 0.0297 T12: -0.0197 REMARK 3 T13: -0.0067 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 5.9782 L22: 2.5187 REMARK 3 L33: 4.8242 L12: -1.4509 REMARK 3 L13: 1.2120 L23: -0.3004 REMARK 3 S TENSOR REMARK 3 S11: -0.0530 S12: 0.1709 S13: 0.0269 REMARK 3 S21: -0.1600 S22: 0.0541 S23: 0.1480 REMARK 3 S31: 0.0367 S32: -0.0682 S33: -0.0503 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 2:37) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4636 32.6171 20.2414 REMARK 3 T TENSOR REMARK 3 T11: 0.0156 T22: 0.0953 REMARK 3 T33: 0.0725 T12: -0.0541 REMARK 3 T13: 0.0097 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.5365 L22: 1.0088 REMARK 3 L33: 1.4732 L12: -0.0364 REMARK 3 L13: -0.8181 L23: 0.5317 REMARK 3 S TENSOR REMARK 3 S11: 0.0156 S12: 0.2013 S13: -0.0121 REMARK 3 S21: -0.1225 S22: -0.0382 S23: 0.2529 REMARK 3 S31: -0.0676 S32: -0.3915 S33: 0.0111 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 38:55) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0733 25.6302 15.3372 REMARK 3 T TENSOR REMARK 3 T11: 0.1046 T22: 0.1035 REMARK 3 T33: 0.0761 T12: -0.0411 REMARK 3 T13: 0.0147 T23: -0.0360 REMARK 3 L TENSOR REMARK 3 L11: 4.3959 L22: 2.8139 REMARK 3 L33: 1.8307 L12: -1.2614 REMARK 3 L13: 0.5492 L23: 0.2776 REMARK 3 S TENSOR REMARK 3 S11: 0.1444 S12: 0.1169 S13: -0.4499 REMARK 3 S21: -0.2361 S22: -0.0382 S23: 0.1511 REMARK 3 S31: 0.1873 S32: -0.1014 S33: -0.0646 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 56:80) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2761 27.7357 20.0696 REMARK 3 T TENSOR REMARK 3 T11: 0.0473 T22: 0.0554 REMARK 3 T33: 0.0575 T12: 0.0011 REMARK 3 T13: 0.0471 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 3.3144 L22: 3.0857 REMARK 3 L33: 3.7536 L12: -0.1631 REMARK 3 L13: 0.6691 L23: -0.2212 REMARK 3 S TENSOR REMARK 3 S11: 0.0960 S12: -0.1086 S13: -0.3151 REMARK 3 S21: 0.0943 S22: 0.0014 S23: -0.1151 REMARK 3 S31: 0.1737 S32: 0.2494 S33: -0.0631 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 81:114) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1485 35.4376 31.3561 REMARK 3 T TENSOR REMARK 3 T11: 0.0531 T22: 0.1127 REMARK 3 T33: 0.1504 T12: -0.0313 REMARK 3 T13: -0.0077 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.6828 L22: 0.7727 REMARK 3 L33: 1.0283 L12: -0.2157 REMARK 3 L13: -0.6809 L23: 0.5765 REMARK 3 S TENSOR REMARK 3 S11: 0.0494 S12: -0.2294 S13: 0.1142 REMARK 3 S21: 0.1218 S22: 0.0509 S23: -0.3084 REMARK 3 S31: -0.0137 S32: 0.2059 S33: -0.0057 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 115:203) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8649 46.5351 43.1092 REMARK 3 T TENSOR REMARK 3 T11: 0.0635 T22: 0.0453 REMARK 3 T33: 0.0647 T12: 0.0120 REMARK 3 T13: 0.0035 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 1.3132 L22: 1.3217 REMARK 3 L33: 1.5343 L12: 0.3983 REMARK 3 L13: -0.0145 L23: 0.5202 REMARK 3 S TENSOR REMARK 3 S11: 0.0180 S12: -0.0853 S13: 0.1046 REMARK 3 S21: 0.0799 S22: 0.0195 S23: -0.0391 REMARK 3 S31: -0.0680 S32: 0.0141 S33: -0.0276 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 204:233) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8988 48.1575 44.5257 REMARK 3 T TENSOR REMARK 3 T11: 0.1000 T22: 0.0829 REMARK 3 T33: 0.0812 T12: 0.1044 REMARK 3 T13: 0.0052 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 2.3084 L22: 1.0172 REMARK 3 L33: 0.5835 L12: -0.0955 REMARK 3 L13: -0.2362 L23: -0.3618 REMARK 3 S TENSOR REMARK 3 S11: -0.0830 S12: -0.0322 S13: 0.3629 REMARK 3 S21: 0.2047 S22: 0.1027 S23: 0.2113 REMARK 3 S31: -0.3454 S32: -0.3030 S33: -0.0840 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 234:271) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2929 32.5727 35.1512 REMARK 3 T TENSOR REMARK 3 T11: 0.0473 T22: 0.0592 REMARK 3 T33: 0.0704 T12: 0.0038 REMARK 3 T13: 0.0069 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 1.8153 L22: 1.0295 REMARK 3 L33: 1.4295 L12: 0.6800 REMARK 3 L13: -1.0044 L23: -0.0490 REMARK 3 S TENSOR REMARK 3 S11: -0.1598 S12: 0.0933 S13: -0.1663 REMARK 3 S21: -0.0308 S22: 0.1103 S23: -0.0553 REMARK 3 S31: 0.0552 S32: 0.0719 S33: 0.0592 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 272:287) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7740 36.2677 23.9884 REMARK 3 T TENSOR REMARK 3 T11: 0.0229 T22: 0.1140 REMARK 3 T33: 0.0258 T12: 0.0051 REMARK 3 T13: 0.0144 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 6.4710 L22: 4.4291 REMARK 3 L33: 4.2080 L12: 2.4005 REMARK 3 L13: -0.9248 L23: 1.7952 REMARK 3 S TENSOR REMARK 3 S11: -0.0673 S12: 0.3778 S13: 0.1497 REMARK 3 S21: -0.2904 S22: 0.0292 S23: 0.0744 REMARK 3 S31: -0.0866 S32: -0.2518 S33: -0.1080 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UF6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44398 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 32.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.63400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.640 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3TNG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 0.1M BIS-TRIS, REMARK 280 25% W/V PEG 3350, PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.79700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EXPERIMENTALLY UNKNOWN. IT IS PREDICTED THAT THE CHAINS A REMARK 300 AND B FORM A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 LYS A 288 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 LYS B 288 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 25 141.60 78.83 REMARK 500 THR A 110 -154.28 -114.49 REMARK 500 ALA A 135 -6.06 -159.64 REMARK 500 LYS A 141 -162.53 -101.98 REMARK 500 ASP B 25 135.00 76.55 REMARK 500 THR B 110 -154.04 -114.61 REMARK 500 ALA B 135 -9.76 -155.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 COD A 289 REMARK 610 COD B 289 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COD A 289 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COD B 289 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3TNG RELATED DB: PDB REMARK 900 RELATED ID: 3U9E RELATED DB: PDB REMARK 900 RELATED ID: IDP05684 RELATED DB: TARGETDB DBREF 3UF6 A 1 288 UNP Q8Y7B7 Q8Y7B7_LISMO 1 288 DBREF 3UF6 B 1 288 UNP Q8Y7B7 Q8Y7B7_LISMO 1 288 SEQADV 3UF6 SER A -2 UNP Q8Y7B7 EXPRESSION TAG SEQADV 3UF6 ASN A -1 UNP Q8Y7B7 EXPRESSION TAG SEQADV 3UF6 ALA A 0 UNP Q8Y7B7 EXPRESSION TAG SEQADV 3UF6 SER B -2 UNP Q8Y7B7 EXPRESSION TAG SEQADV 3UF6 ASN B -1 UNP Q8Y7B7 EXPRESSION TAG SEQADV 3UF6 ALA B 0 UNP Q8Y7B7 EXPRESSION TAG SEQRES 1 A 291 SER ASN ALA MSE THR LYS SER ARG PHE PHE SER ASP VAL SEQRES 2 A 291 ALA GLU THR SER SER PHE VAL PHE ALA VAL ALA GLY ALA SEQRES 3 A 291 ASP ASP GLU VAL VAL LEU GLU THR ILE ARG LEU ALA LEU SEQRES 4 A 291 LYS GLN LYS LEU GLY LYS PHE LEU LEU PHE GLY LYS LYS SEQRES 5 A 291 GLU ASP LYS THR LEU THR ALA ASN GLU SER VAL THR TRP SEQRES 6 A 291 ILE GLN THR ASP THR ALA GLU ALA ALA ALA GLN GLY ALA SEQRES 7 A 291 ILE LEU ALA VAL LYS ASN LYS GLU ALA ASP ILE LEU VAL SEQRES 8 A 291 LYS GLY PHE ILE PRO THR ALA THR LEU MSE HIS HIS VAL SEQRES 9 A 291 LEU LYS LYS GLU ASN GLY LEU ARG THR ASP GLN LEU LEU SEQRES 10 A 291 SER GLN ILE ALA ILE PHE ASP ILE PRO THR TYR HIS LYS SEQRES 11 A 291 PRO LEU LEU ILE THR ASP CYS ALA MSE ASN VAL ALA PRO SEQRES 12 A 291 LYS THR LYS GLU LYS ILE ALA ILE THR GLU ASN ALA LEU SEQRES 13 A 291 ALA VAL ALA HIS GLN ILE GLY ILE THR ASN PRO LYS ILE SEQRES 14 A 291 ALA LEU LEU SER ALA VAL GLU GLU VAL THR ALA LYS MSE SEQRES 15 A 291 PRO SER THR LEU GLU ALA GLN GLU VAL VAL GLN HIS PHE SEQRES 16 A 291 GLY ASN GLN ILE SER VAL SER GLY PRO LEU ALA LEU ASP SEQRES 17 A 291 VAL ALA ILE SER LYS GLU ALA ALA LEU HIS LYS GLY ILE SEQRES 18 A 291 THR ASP SER SER ALA GLY GLU ALA ASP ILE LEU ILE ALA SEQRES 19 A 291 PRO ASN ILE GLU THR GLY ASN ALA LEU TYR LYS SER LEU SEQRES 20 A 291 VAL TYR PHE ALA GLY ALA LYS VAL GLY SER ALA VAL VAL SEQRES 21 A 291 GLY ALA LYS VAL PRO ILE VAL ILE SER SER ARG ASN ASP SEQRES 22 A 291 SER PRO GLU ASN LYS LEU ALA SER PHE ILE LEU THR VAL SEQRES 23 A 291 ARG LEU VAL GLU LYS SEQRES 1 B 291 SER ASN ALA MSE THR LYS SER ARG PHE PHE SER ASP VAL SEQRES 2 B 291 ALA GLU THR SER SER PHE VAL PHE ALA VAL ALA GLY ALA SEQRES 3 B 291 ASP ASP GLU VAL VAL LEU GLU THR ILE ARG LEU ALA LEU SEQRES 4 B 291 LYS GLN LYS LEU GLY LYS PHE LEU LEU PHE GLY LYS LYS SEQRES 5 B 291 GLU ASP LYS THR LEU THR ALA ASN GLU SER VAL THR TRP SEQRES 6 B 291 ILE GLN THR ASP THR ALA GLU ALA ALA ALA GLN GLY ALA SEQRES 7 B 291 ILE LEU ALA VAL LYS ASN LYS GLU ALA ASP ILE LEU VAL SEQRES 8 B 291 LYS GLY PHE ILE PRO THR ALA THR LEU MSE HIS HIS VAL SEQRES 9 B 291 LEU LYS LYS GLU ASN GLY LEU ARG THR ASP GLN LEU LEU SEQRES 10 B 291 SER GLN ILE ALA ILE PHE ASP ILE PRO THR TYR HIS LYS SEQRES 11 B 291 PRO LEU LEU ILE THR ASP CYS ALA MSE ASN VAL ALA PRO SEQRES 12 B 291 LYS THR LYS GLU LYS ILE ALA ILE THR GLU ASN ALA LEU SEQRES 13 B 291 ALA VAL ALA HIS GLN ILE GLY ILE THR ASN PRO LYS ILE SEQRES 14 B 291 ALA LEU LEU SER ALA VAL GLU GLU VAL THR ALA LYS MSE SEQRES 15 B 291 PRO SER THR LEU GLU ALA GLN GLU VAL VAL GLN HIS PHE SEQRES 16 B 291 GLY ASN GLN ILE SER VAL SER GLY PRO LEU ALA LEU ASP SEQRES 17 B 291 VAL ALA ILE SER LYS GLU ALA ALA LEU HIS LYS GLY ILE SEQRES 18 B 291 THR ASP SER SER ALA GLY GLU ALA ASP ILE LEU ILE ALA SEQRES 19 B 291 PRO ASN ILE GLU THR GLY ASN ALA LEU TYR LYS SER LEU SEQRES 20 B 291 VAL TYR PHE ALA GLY ALA LYS VAL GLY SER ALA VAL VAL SEQRES 21 B 291 GLY ALA LYS VAL PRO ILE VAL ILE SER SER ARG ASN ASP SEQRES 22 B 291 SER PRO GLU ASN LYS LEU ALA SER PHE ILE LEU THR VAL SEQRES 23 B 291 ARG LEU VAL GLU LYS MODRES 3UF6 MSE A 98 MET SELENOMETHIONINE MODRES 3UF6 MSE A 136 MET SELENOMETHIONINE MODRES 3UF6 MSE A 179 MET SELENOMETHIONINE MODRES 3UF6 MSE B 98 MET SELENOMETHIONINE MODRES 3UF6 MSE B 136 MET SELENOMETHIONINE MODRES 3UF6 MSE B 179 MET SELENOMETHIONINE HET MSE A 98 8 HET MSE A 136 8 HET MSE A 179 8 HET MSE B 98 8 HET MSE B 136 8 HET MSE B 179 8 HET COD A 289 27 HET COD B 289 27 HETNAM MSE SELENOMETHIONINE HETNAM COD DEPHOSPHO COENZYME A FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 COD 2(C21 H35 N7 O13 P2 S) FORMUL 5 HOH *371(H2 O) HELIX 1 1 ASP A 25 GLN A 38 1 14 HELIX 2 2 ASP A 51 ALA A 56 1 6 HELIX 3 3 THR A 67 ASN A 81 1 15 HELIX 4 4 PRO A 93 LEU A 102 1 10 HELIX 5 5 LYS A 103 GLY A 107 5 5 HELIX 6 6 LYS A 141 GLY A 160 1 20 HELIX 7 7 MSE A 179 GLY A 193 1 15 HELIX 8 8 ALA A 203 SER A 209 1 7 HELIX 9 9 SER A 209 LYS A 216 1 8 HELIX 10 10 ASN A 233 ALA A 248 1 16 HELIX 11 11 SER A 271 GLU A 287 1 17 HELIX 12 12 ASP B 25 GLN B 38 1 14 HELIX 13 13 ASP B 51 ALA B 56 1 6 HELIX 14 14 THR B 67 ASN B 81 1 15 HELIX 15 15 PRO B 93 LEU B 102 1 10 HELIX 16 16 LYS B 103 GLY B 107 5 5 HELIX 17 17 LYS B 141 ILE B 159 1 19 HELIX 18 18 MSE B 179 PHE B 192 1 14 HELIX 19 19 ALA B 203 SER B 209 1 7 HELIX 20 20 SER B 209 LYS B 216 1 8 HELIX 21 21 ASN B 233 PHE B 247 1 15 HELIX 22 22 SER B 271 GLU B 287 1 17 SHEET 1 A 5 VAL A 60 GLN A 64 0 SHEET 2 A 5 LYS A 42 GLY A 47 1 N LEU A 45 O THR A 61 SHEET 3 A 5 VAL A 17 ALA A 21 1 N VAL A 20 O LEU A 44 SHEET 4 A 5 ILE A 86 LYS A 89 1 O VAL A 88 N ALA A 19 SHEET 5 A 5 ILE A 263 VAL A 264 1 O VAL A 264 N LYS A 89 SHEET 1 B 6 VAL A 198 LEU A 202 0 SHEET 2 B 6 ILE A 166 LEU A 169 1 N LEU A 168 O SER A 199 SHEET 3 B 6 ILE A 228 ILE A 230 1 O ILE A 230 N ALA A 167 SHEET 4 B 6 LEU A 129 THR A 132 1 N LEU A 130 O LEU A 229 SHEET 5 B 6 SER A 115 ASP A 121 -1 N PHE A 120 O LEU A 129 SHEET 6 B 6 LYS A 251 VAL A 257 -1 O VAL A 257 N SER A 115 SHEET 1 C 5 VAL B 60 GLN B 64 0 SHEET 2 C 5 LYS B 42 GLY B 47 1 N LEU B 45 O THR B 61 SHEET 3 C 5 VAL B 17 ALA B 21 1 N VAL B 20 O LEU B 44 SHEET 4 C 5 ILE B 86 LYS B 89 1 O ILE B 86 N ALA B 19 SHEET 5 C 5 ILE B 263 VAL B 264 1 O VAL B 264 N LEU B 87 SHEET 1 D 6 VAL B 198 LEU B 202 0 SHEET 2 D 6 ILE B 166 LEU B 169 1 N LEU B 168 O SER B 199 SHEET 3 D 6 ILE B 228 ILE B 230 1 O ILE B 230 N ALA B 167 SHEET 4 D 6 LEU B 129 THR B 132 1 N LEU B 130 O LEU B 229 SHEET 5 D 6 SER B 115 ASP B 121 -1 N PHE B 120 O LEU B 129 SHEET 6 D 6 LYS B 251 VAL B 257 -1 O VAL B 257 N SER B 115 LINK C LEU A 97 N MSE A 98 1555 1555 1.33 LINK C MSE A 98 N HIS A 99 1555 1555 1.33 LINK C ALA A 135 N MSE A 136 1555 1555 1.33 LINK C MSE A 136 N ASN A 137 1555 1555 1.33 LINK C LYS A 178 N MSE A 179 1555 1555 1.33 LINK C MSE A 179 N PRO A 180 1555 1555 1.34 LINK C LEU B 97 N MSE B 98 1555 1555 1.33 LINK C MSE B 98 N HIS B 99 1555 1555 1.33 LINK C ALA B 135 N MSE B 136 1555 1555 1.33 LINK C MSE B 136 N ASN B 137 1555 1555 1.33 LINK C LYS B 178 N MSE B 179 1555 1555 1.33 LINK C MSE B 179 N PRO B 180 1555 1555 1.34 CISPEP 1 THR A 132 ASP A 133 0 -5.84 CISPEP 2 GLY A 200 PRO A 201 0 0.53 CISPEP 3 THR B 132 ASP B 133 0 -5.43 CISPEP 4 GLY B 200 PRO B 201 0 -1.01 SITE 1 AC1 14 THR A 94 ALA A 135 MSE A 136 ASN A 238 SITE 2 AC1 14 TYR A 241 LYS A 242 SER A 254 VAL A 256 SITE 3 AC1 14 ILE A 265 SER A 266 SER A 267 HOH A 312 SITE 4 AC1 14 HOH A 405 LYS B 216 SITE 1 AC2 9 GLU A 273 HIS B 99 LEU B 102 ARG B 109 SITE 2 AC2 9 LEU B 113 LEU B 114 MSE B 136 ASN B 137 SITE 3 AC2 9 HOH B 491 CRYST1 53.440 75.594 60.332 90.00 91.62 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018713 0.000000 0.000529 0.00000 SCALE2 0.000000 0.013229 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016582 0.00000