data_3UFD # _entry.id 3UFD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3UFD pdb_00003ufd 10.2210/pdb3ufd/pdb NDB NA1369 ? ? RCSB RCSB068684 ? ? WWPDB D_1000068684 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-07-11 2 'Structure model' 1 1 2012-09-12 3 'Structure model' 1 2 2012-12-19 4 'Structure model' 1 3 2014-11-12 5 'Structure model' 1 4 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 3UFD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-11-01 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3CLC 'Two C.Esp1396I dimers bound to C/R promoter' unspecified PDB 3G5G 'C.Esp1396I native free protein' unspecified PDB 3FYA 'C.Esp1396I R35A mutant free protein' unspecified PDB 3S8Q 'C.Esp1396I bound to the distal operator site of the C/R promoter' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ball, N.J.' 1 'McGeehan, J.E.' 2 'Streeter, S.D.' 3 'Thresh, S.-J.' 4 'Kneale, G.G.' 5 # _citation.id primary _citation.title 'The structural basis of differential DNA sequence recognition by restriction-modification controller proteins.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 40 _citation.page_first 10532 _citation.page_last 10542 _citation.year 2012 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22941636 _citation.pdbx_database_id_DOI 10.1093/nar/gks718 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ball, N.J.' 1 ? primary 'McGeehan, J.E.' 2 ? primary 'Streeter, S.D.' 3 ? primary 'Thresh, S.J.' 4 ? primary 'Kneale, G.G.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Regulatory protein' 9521.175 4 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*TP*GP*TP*AP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*GP*AP*CP*A)-3') ; 5852.823 2 ? ? ? 'OM 19-mer' 3 polymer syn ;DNA (5'-D(*TP*TP*GP*TP*CP*GP*AP*CP*TP*AP*TP*AP*GP*TP*CP*TP*AP*CP*A)-3') ; 5794.771 2 ? ? ? 'OM 19-mer' 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 13 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; A,B,E,F ? 2 polydeoxyribonucleotide no no '(DA)(DT)(DG)(DT)(DA)(DG)(DA)(DC)(DT)(DA)(DT)(DA)(DG)(DT)(DC)(DG)(DA)(DC)(DA)' ATGTAGACTATAGTCGACA C,G ? 3 polydeoxyribonucleotide no no '(DT)(DT)(DG)(DT)(DC)(DG)(DA)(DC)(DT)(DA)(DT)(DA)(DG)(DT)(DC)(DT)(DA)(DC)(DA)' TTGTCGACTATAGTCTACA D,H ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CHLORIDE ION' CL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 SER n 1 7 PHE n 1 8 LEU n 1 9 LEU n 1 10 SER n 1 11 LYS n 1 12 VAL n 1 13 SER n 1 14 PHE n 1 15 VAL n 1 16 ILE n 1 17 LYS n 1 18 LYS n 1 19 ILE n 1 20 ARG n 1 21 LEU n 1 22 GLU n 1 23 LYS n 1 24 GLY n 1 25 MET n 1 26 THR n 1 27 GLN n 1 28 GLU n 1 29 ASP n 1 30 LEU n 1 31 ALA n 1 32 TYR n 1 33 LYS n 1 34 SER n 1 35 ASN n 1 36 LEU n 1 37 ASP n 1 38 ARG n 1 39 THR n 1 40 TYR n 1 41 ILE n 1 42 SER n 1 43 GLY n 1 44 ILE n 1 45 GLU n 1 46 ARG n 1 47 ASN n 1 48 SER n 1 49 ARG n 1 50 ASN n 1 51 LEU n 1 52 THR n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 LEU n 1 57 GLU n 1 58 LEU n 1 59 ILE n 1 60 MET n 1 61 LYS n 1 62 GLY n 1 63 LEU n 1 64 GLU n 1 65 VAL n 1 66 SER n 1 67 ASP n 1 68 VAL n 1 69 VAL n 1 70 PHE n 1 71 PHE n 1 72 GLU n 1 73 MET n 1 74 LEU n 1 75 ILE n 1 76 LYS n 1 77 GLU n 1 78 ILE n 1 79 LEU n 1 80 LYS n 1 81 HIS n 1 82 ASP n 2 1 DA n 2 2 DT n 2 3 DG n 2 4 DT n 2 5 DA n 2 6 DG n 2 7 DA n 2 8 DC n 2 9 DT n 2 10 DA n 2 11 DT n 2 12 DA n 2 13 DG n 2 14 DT n 2 15 DC n 2 16 DG n 2 17 DA n 2 18 DC n 2 19 DA n 3 1 DT n 3 2 DT n 3 3 DG n 3 4 DT n 3 5 DC n 3 6 DG n 3 7 DA n 3 8 DC n 3 9 DT n 3 10 DA n 3 11 DT n 3 12 DA n 3 13 DG n 3 14 DT n 3 15 DC n 3 16 DT n 3 17 DA n 3 18 DC n 3 19 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene esp1396IC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacter sp. RFL1396' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211595 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLU 5 2 2 GLU GLU A . n A 1 6 SER 6 3 3 SER SER A . n A 1 7 PHE 7 4 4 PHE PHE A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 SER 10 7 7 SER SER A . n A 1 11 LYS 11 8 8 LYS LYS A . n A 1 12 VAL 12 9 9 VAL VAL A . n A 1 13 SER 13 10 10 SER SER A . n A 1 14 PHE 14 11 11 PHE PHE A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 ILE 16 13 13 ILE ILE A . n A 1 17 LYS 17 14 14 LYS LYS A . n A 1 18 LYS 18 15 15 LYS LYS A . n A 1 19 ILE 19 16 16 ILE ILE A . n A 1 20 ARG 20 17 17 ARG ARG A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 GLU 22 19 19 GLU GLU A . n A 1 23 LYS 23 20 20 LYS LYS A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 MET 25 22 22 MET MET A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 GLN 27 24 24 GLN GLN A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 TYR 32 29 29 TYR TYR A . n A 1 33 LYS 33 30 30 LYS LYS A . n A 1 34 SER 34 31 31 SER SER A . n A 1 35 ASN 35 32 32 ASN ASN A . n A 1 36 LEU 36 33 33 LEU LEU A . n A 1 37 ASP 37 34 34 ASP ASP A . n A 1 38 ARG 38 35 35 ARG ARG A . n A 1 39 THR 39 36 36 THR THR A . n A 1 40 TYR 40 37 37 TYR TYR A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 SER 42 39 39 SER SER A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 ILE 44 41 41 ILE ILE A . n A 1 45 GLU 45 42 42 GLU GLU A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 ASN 47 44 44 ASN ASN A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 ARG 49 46 46 ARG ARG A . n A 1 50 ASN 50 47 47 ASN ASN A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 ILE 53 50 50 ILE ILE A . n A 1 54 LYS 54 51 51 LYS LYS A . n A 1 55 SER 55 52 52 SER SER A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 GLU 57 54 54 GLU GLU A . n A 1 58 LEU 58 55 55 LEU LEU A . n A 1 59 ILE 59 56 56 ILE ILE A . n A 1 60 MET 60 57 57 MET MET A . n A 1 61 LYS 61 58 58 LYS LYS A . n A 1 62 GLY 62 59 59 GLY GLY A . n A 1 63 LEU 63 60 60 LEU LEU A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 VAL 65 62 62 VAL VAL A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 ASP 67 64 64 ASP ASP A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 VAL 69 66 66 VAL VAL A . n A 1 70 PHE 70 67 67 PHE PHE A . n A 1 71 PHE 71 68 68 PHE PHE A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 MET 73 70 70 MET MET A . n A 1 74 LEU 74 71 71 LEU LEU A . n A 1 75 ILE 75 72 72 ILE ILE A . n A 1 76 LYS 76 73 73 LYS LYS A . n A 1 77 GLU 77 74 74 GLU GLU A . n A 1 78 ILE 78 75 75 ILE ILE A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 LYS 80 77 77 LYS LYS A . n A 1 81 HIS 81 78 ? ? ? A . n A 1 82 ASP 82 79 ? ? ? A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 SER 2 -1 ? ? ? B . n B 1 3 HIS 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 GLU 5 2 2 GLU GLU B . n B 1 6 SER 6 3 3 SER SER B . n B 1 7 PHE 7 4 4 PHE PHE B . n B 1 8 LEU 8 5 5 LEU LEU B . n B 1 9 LEU 9 6 6 LEU LEU B . n B 1 10 SER 10 7 7 SER SER B . n B 1 11 LYS 11 8 8 LYS LYS B . n B 1 12 VAL 12 9 9 VAL VAL B . n B 1 13 SER 13 10 10 SER SER B . n B 1 14 PHE 14 11 11 PHE PHE B . n B 1 15 VAL 15 12 12 VAL VAL B . n B 1 16 ILE 16 13 13 ILE ILE B . n B 1 17 LYS 17 14 14 LYS LYS B . n B 1 18 LYS 18 15 15 LYS LYS B . n B 1 19 ILE 19 16 16 ILE ILE B . n B 1 20 ARG 20 17 17 ARG ARG B . n B 1 21 LEU 21 18 18 LEU LEU B . n B 1 22 GLU 22 19 19 GLU GLU B . n B 1 23 LYS 23 20 20 LYS LYS B . n B 1 24 GLY 24 21 21 GLY GLY B . n B 1 25 MET 25 22 22 MET MET B . n B 1 26 THR 26 23 23 THR THR B . n B 1 27 GLN 27 24 24 GLN GLN B . n B 1 28 GLU 28 25 25 GLU GLU B . n B 1 29 ASP 29 26 26 ASP ASP B . n B 1 30 LEU 30 27 27 LEU LEU B . n B 1 31 ALA 31 28 28 ALA ALA B . n B 1 32 TYR 32 29 29 TYR TYR B . n B 1 33 LYS 33 30 30 LYS LYS B . n B 1 34 SER 34 31 31 SER SER B . n B 1 35 ASN 35 32 32 ASN ASN B . n B 1 36 LEU 36 33 33 LEU LEU B . n B 1 37 ASP 37 34 34 ASP ASP B . n B 1 38 ARG 38 35 35 ARG ARG B . n B 1 39 THR 39 36 36 THR THR B . n B 1 40 TYR 40 37 37 TYR TYR B . n B 1 41 ILE 41 38 38 ILE ILE B . n B 1 42 SER 42 39 39 SER SER B . n B 1 43 GLY 43 40 40 GLY GLY B . n B 1 44 ILE 44 41 41 ILE ILE B . n B 1 45 GLU 45 42 42 GLU GLU B . n B 1 46 ARG 46 43 43 ARG ARG B . n B 1 47 ASN 47 44 44 ASN ASN B . n B 1 48 SER 48 45 45 SER SER B . n B 1 49 ARG 49 46 46 ARG ARG B . n B 1 50 ASN 50 47 47 ASN ASN B . n B 1 51 LEU 51 48 48 LEU LEU B . n B 1 52 THR 52 49 49 THR THR B . n B 1 53 ILE 53 50 50 ILE ILE B . n B 1 54 LYS 54 51 51 LYS LYS B . n B 1 55 SER 55 52 52 SER SER B . n B 1 56 LEU 56 53 53 LEU LEU B . n B 1 57 GLU 57 54 54 GLU GLU B . n B 1 58 LEU 58 55 55 LEU LEU B . n B 1 59 ILE 59 56 56 ILE ILE B . n B 1 60 MET 60 57 57 MET MET B . n B 1 61 LYS 61 58 58 LYS LYS B . n B 1 62 GLY 62 59 59 GLY GLY B . n B 1 63 LEU 63 60 60 LEU LEU B . n B 1 64 GLU 64 61 61 GLU GLU B . n B 1 65 VAL 65 62 62 VAL VAL B . n B 1 66 SER 66 63 63 SER SER B . n B 1 67 ASP 67 64 64 ASP ASP B . n B 1 68 VAL 68 65 65 VAL VAL B . n B 1 69 VAL 69 66 66 VAL VAL B . n B 1 70 PHE 70 67 67 PHE PHE B . n B 1 71 PHE 71 68 68 PHE PHE B . n B 1 72 GLU 72 69 69 GLU GLU B . n B 1 73 MET 73 70 70 MET MET B . n B 1 74 LEU 74 71 71 LEU LEU B . n B 1 75 ILE 75 72 72 ILE ILE B . n B 1 76 LYS 76 73 73 LYS LYS B . n B 1 77 GLU 77 74 74 GLU GLU B . n B 1 78 ILE 78 75 75 ILE ILE B . n B 1 79 LEU 79 76 76 LEU LEU B . n B 1 80 LYS 80 77 77 LYS LYS B . n B 1 81 HIS 81 78 78 HIS HIS B . n B 1 82 ASP 82 79 ? ? ? B . n C 2 1 DA 1 1 1 DA A C . n C 2 2 DT 2 2 2 DT T C . n C 2 3 DG 3 3 3 DG G C . n C 2 4 DT 4 4 4 DT T C . n C 2 5 DA 5 5 5 DA A C . n C 2 6 DG 6 6 6 DG G C . n C 2 7 DA 7 7 7 DA A C . n C 2 8 DC 8 8 8 DC C C . n C 2 9 DT 9 9 9 DT T C . n C 2 10 DA 10 10 10 DA A C . n C 2 11 DT 11 11 11 DT T C . n C 2 12 DA 12 12 12 DA A C . n C 2 13 DG 13 13 13 DG G C . n C 2 14 DT 14 14 14 DT T C . n C 2 15 DC 15 15 15 DC C C . n C 2 16 DG 16 16 16 DG G C . n C 2 17 DA 17 17 17 DA A C . n C 2 18 DC 18 18 18 DC C C . n C 2 19 DA 19 19 19 DA A C . n D 3 1 DT 1 1 1 DT T D . n D 3 2 DT 2 2 2 DT T D . n D 3 3 DG 3 3 3 DG G D . n D 3 4 DT 4 4 4 DT T D . n D 3 5 DC 5 5 5 DC C D . n D 3 6 DG 6 6 6 DG G D . n D 3 7 DA 7 7 7 DA A D . n D 3 8 DC 8 8 8 DC C D . n D 3 9 DT 9 9 9 DT T D . n D 3 10 DA 10 10 10 DA A D . n D 3 11 DT 11 11 11 DT T D . n D 3 12 DA 12 12 12 DA A D . n D 3 13 DG 13 13 13 DG G D . n D 3 14 DT 14 14 14 DT T D . n D 3 15 DC 15 15 15 DC C D . n D 3 16 DT 16 16 16 DT T D . n D 3 17 DA 17 17 17 DA A D . n D 3 18 DC 18 18 18 DC C D . n D 3 19 DA 19 19 19 DA A D . n E 1 1 GLY 1 -2 ? ? ? E . n E 1 2 SER 2 -1 ? ? ? E . n E 1 3 HIS 3 0 ? ? ? E . n E 1 4 MET 4 1 ? ? ? E . n E 1 5 GLU 5 2 2 GLU GLU E . n E 1 6 SER 6 3 3 SER SER E . n E 1 7 PHE 7 4 4 PHE PHE E . n E 1 8 LEU 8 5 5 LEU LEU E . n E 1 9 LEU 9 6 6 LEU LEU E . n E 1 10 SER 10 7 7 SER SER E . n E 1 11 LYS 11 8 8 LYS LYS E . n E 1 12 VAL 12 9 9 VAL VAL E . n E 1 13 SER 13 10 10 SER SER E . n E 1 14 PHE 14 11 11 PHE PHE E . n E 1 15 VAL 15 12 12 VAL VAL E . n E 1 16 ILE 16 13 13 ILE ILE E . n E 1 17 LYS 17 14 14 LYS LYS E . n E 1 18 LYS 18 15 15 LYS LYS E . n E 1 19 ILE 19 16 16 ILE ILE E . n E 1 20 ARG 20 17 17 ARG ARG E . n E 1 21 LEU 21 18 18 LEU LEU E . n E 1 22 GLU 22 19 19 GLU GLU E . n E 1 23 LYS 23 20 20 LYS LYS E . n E 1 24 GLY 24 21 21 GLY GLY E . n E 1 25 MET 25 22 22 MET MET E . n E 1 26 THR 26 23 23 THR THR E . n E 1 27 GLN 27 24 24 GLN GLN E . n E 1 28 GLU 28 25 25 GLU GLU E . n E 1 29 ASP 29 26 26 ASP ASP E . n E 1 30 LEU 30 27 27 LEU LEU E . n E 1 31 ALA 31 28 28 ALA ALA E . n E 1 32 TYR 32 29 29 TYR TYR E . n E 1 33 LYS 33 30 30 LYS LYS E . n E 1 34 SER 34 31 31 SER SER E . n E 1 35 ASN 35 32 32 ASN ASN E . n E 1 36 LEU 36 33 33 LEU LEU E . n E 1 37 ASP 37 34 34 ASP ASP E . n E 1 38 ARG 38 35 35 ARG ARG E . n E 1 39 THR 39 36 36 THR THR E . n E 1 40 TYR 40 37 37 TYR TYR E . n E 1 41 ILE 41 38 38 ILE ILE E . n E 1 42 SER 42 39 39 SER SER E . n E 1 43 GLY 43 40 40 GLY GLY E . n E 1 44 ILE 44 41 41 ILE ILE E . n E 1 45 GLU 45 42 42 GLU GLU E . n E 1 46 ARG 46 43 43 ARG ARG E . n E 1 47 ASN 47 44 44 ASN ASN E . n E 1 48 SER 48 45 45 SER SER E . n E 1 49 ARG 49 46 46 ARG ARG E . n E 1 50 ASN 50 47 47 ASN ASN E . n E 1 51 LEU 51 48 48 LEU LEU E . n E 1 52 THR 52 49 49 THR THR E . n E 1 53 ILE 53 50 50 ILE ILE E . n E 1 54 LYS 54 51 51 LYS LYS E . n E 1 55 SER 55 52 52 SER SER E . n E 1 56 LEU 56 53 53 LEU LEU E . n E 1 57 GLU 57 54 54 GLU GLU E . n E 1 58 LEU 58 55 55 LEU LEU E . n E 1 59 ILE 59 56 56 ILE ILE E . n E 1 60 MET 60 57 57 MET MET E . n E 1 61 LYS 61 58 58 LYS LYS E . n E 1 62 GLY 62 59 59 GLY GLY E . n E 1 63 LEU 63 60 60 LEU LEU E . n E 1 64 GLU 64 61 61 GLU GLU E . n E 1 65 VAL 65 62 62 VAL VAL E . n E 1 66 SER 66 63 63 SER SER E . n E 1 67 ASP 67 64 64 ASP ASP E . n E 1 68 VAL 68 65 65 VAL VAL E . n E 1 69 VAL 69 66 66 VAL VAL E . n E 1 70 PHE 70 67 67 PHE PHE E . n E 1 71 PHE 71 68 68 PHE PHE E . n E 1 72 GLU 72 69 69 GLU GLU E . n E 1 73 MET 73 70 70 MET MET E . n E 1 74 LEU 74 71 71 LEU LEU E . n E 1 75 ILE 75 72 72 ILE ILE E . n E 1 76 LYS 76 73 73 LYS LYS E . n E 1 77 GLU 77 74 74 GLU GLU E . n E 1 78 ILE 78 75 75 ILE ILE E . n E 1 79 LEU 79 76 76 LEU LEU E . n E 1 80 LYS 80 77 77 LYS LYS E . n E 1 81 HIS 81 78 ? ? ? E . n E 1 82 ASP 82 79 ? ? ? E . n F 1 1 GLY 1 -2 ? ? ? F . n F 1 2 SER 2 -1 ? ? ? F . n F 1 3 HIS 3 0 ? ? ? F . n F 1 4 MET 4 1 ? ? ? F . n F 1 5 GLU 5 2 ? ? ? F . n F 1 6 SER 6 3 3 SER SER F . n F 1 7 PHE 7 4 4 PHE PHE F . n F 1 8 LEU 8 5 5 LEU LEU F . n F 1 9 LEU 9 6 6 LEU LEU F . n F 1 10 SER 10 7 7 SER SER F . n F 1 11 LYS 11 8 8 LYS LYS F . n F 1 12 VAL 12 9 9 VAL VAL F . n F 1 13 SER 13 10 10 SER SER F . n F 1 14 PHE 14 11 11 PHE PHE F . n F 1 15 VAL 15 12 12 VAL VAL F . n F 1 16 ILE 16 13 13 ILE ILE F . n F 1 17 LYS 17 14 14 LYS LYS F . n F 1 18 LYS 18 15 15 LYS LYS F . n F 1 19 ILE 19 16 16 ILE ILE F . n F 1 20 ARG 20 17 17 ARG ARG F . n F 1 21 LEU 21 18 18 LEU LEU F . n F 1 22 GLU 22 19 19 GLU GLU F . n F 1 23 LYS 23 20 20 LYS LYS F . n F 1 24 GLY 24 21 21 GLY GLY F . n F 1 25 MET 25 22 22 MET MET F . n F 1 26 THR 26 23 23 THR THR F . n F 1 27 GLN 27 24 24 GLN GLN F . n F 1 28 GLU 28 25 25 GLU GLU F . n F 1 29 ASP 29 26 26 ASP ASP F . n F 1 30 LEU 30 27 27 LEU LEU F . n F 1 31 ALA 31 28 28 ALA ALA F . n F 1 32 TYR 32 29 29 TYR TYR F . n F 1 33 LYS 33 30 30 LYS LYS F . n F 1 34 SER 34 31 31 SER SER F . n F 1 35 ASN 35 32 32 ASN ASN F . n F 1 36 LEU 36 33 33 LEU LEU F . n F 1 37 ASP 37 34 34 ASP ASP F . n F 1 38 ARG 38 35 35 ARG ARG F . n F 1 39 THR 39 36 36 THR THR F . n F 1 40 TYR 40 37 37 TYR TYR F . n F 1 41 ILE 41 38 38 ILE ILE F . n F 1 42 SER 42 39 39 SER SER F . n F 1 43 GLY 43 40 40 GLY GLY F . n F 1 44 ILE 44 41 41 ILE ILE F . n F 1 45 GLU 45 42 42 GLU GLU F . n F 1 46 ARG 46 43 43 ARG ARG F . n F 1 47 ASN 47 44 44 ASN ASN F . n F 1 48 SER 48 45 45 SER SER F . n F 1 49 ARG 49 46 46 ARG ARG F . n F 1 50 ASN 50 47 47 ASN ASN F . n F 1 51 LEU 51 48 48 LEU LEU F . n F 1 52 THR 52 49 49 THR THR F . n F 1 53 ILE 53 50 50 ILE ILE F . n F 1 54 LYS 54 51 51 LYS LYS F . n F 1 55 SER 55 52 52 SER SER F . n F 1 56 LEU 56 53 53 LEU LEU F . n F 1 57 GLU 57 54 54 GLU GLU F . n F 1 58 LEU 58 55 55 LEU LEU F . n F 1 59 ILE 59 56 56 ILE ILE F . n F 1 60 MET 60 57 57 MET MET F . n F 1 61 LYS 61 58 58 LYS LYS F . n F 1 62 GLY 62 59 59 GLY GLY F . n F 1 63 LEU 63 60 60 LEU LEU F . n F 1 64 GLU 64 61 61 GLU GLU F . n F 1 65 VAL 65 62 62 VAL VAL F . n F 1 66 SER 66 63 63 SER SER F . n F 1 67 ASP 67 64 64 ASP ASP F . n F 1 68 VAL 68 65 65 VAL VAL F . n F 1 69 VAL 69 66 66 VAL VAL F . n F 1 70 PHE 70 67 67 PHE PHE F . n F 1 71 PHE 71 68 68 PHE PHE F . n F 1 72 GLU 72 69 69 GLU GLU F . n F 1 73 MET 73 70 70 MET MET F . n F 1 74 LEU 74 71 71 LEU LEU F . n F 1 75 ILE 75 72 72 ILE ILE F . n F 1 76 LYS 76 73 73 LYS LYS F . n F 1 77 GLU 77 74 74 GLU GLU F . n F 1 78 ILE 78 75 75 ILE ILE F . n F 1 79 LEU 79 76 76 LEU LEU F . n F 1 80 LYS 80 77 77 LYS LYS F . n F 1 81 HIS 81 78 78 HIS HIS F . n F 1 82 ASP 82 79 ? ? ? F . n G 2 1 DA 1 1 1 DA A G . n G 2 2 DT 2 2 2 DT T G . n G 2 3 DG 3 3 3 DG G G . n G 2 4 DT 4 4 4 DT T G . n G 2 5 DA 5 5 5 DA A G . n G 2 6 DG 6 6 6 DG G G . n G 2 7 DA 7 7 7 DA A G . n G 2 8 DC 8 8 8 DC C G . n G 2 9 DT 9 9 9 DT T G . n G 2 10 DA 10 10 10 DA A G . n G 2 11 DT 11 11 11 DT T G . n G 2 12 DA 12 12 12 DA A G . n G 2 13 DG 13 13 13 DG G G . n G 2 14 DT 14 14 14 DT T G . n G 2 15 DC 15 15 15 DC C G . n G 2 16 DG 16 16 16 DG G G . n G 2 17 DA 17 17 17 DA A G . n G 2 18 DC 18 18 18 DC C G . n G 2 19 DA 19 19 19 DA A G . n H 3 1 DT 1 1 1 DT T H . n H 3 2 DT 2 2 2 DT T H . n H 3 3 DG 3 3 3 DG G H . n H 3 4 DT 4 4 4 DT T H . n H 3 5 DC 5 5 5 DC C H . n H 3 6 DG 6 6 6 DG G H . n H 3 7 DA 7 7 7 DA A H . n H 3 8 DC 8 8 8 DC C H . n H 3 9 DT 9 9 9 DT T H . n H 3 10 DA 10 10 10 DA A H . n H 3 11 DT 11 11 11 DT T H . n H 3 12 DA 12 12 12 DA A H . n H 3 13 DG 13 13 13 DG G H . n H 3 14 DT 14 14 14 DT T H . n H 3 15 DC 15 15 15 DC C H . n H 3 16 DT 16 16 16 DT T H . n H 3 17 DA 17 17 17 DA A H . n H 3 18 DC 18 18 18 DC C H . n H 3 19 DA 19 19 19 DA A H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 4 CL 1 80 1 CL CL B . J 5 HOH 1 80 11 HOH HOH A . K 5 HOH 1 81 9 HOH HOH B . K 5 HOH 2 82 10 HOH HOH B . K 5 HOH 3 83 18 HOH HOH B . L 5 HOH 1 20 17 HOH HOH C . M 5 HOH 1 80 3 HOH HOH E . M 5 HOH 2 81 16 HOH HOH E . N 5 HOH 1 80 15 HOH HOH F . O 5 HOH 1 20 13 HOH HOH G . P 5 HOH 1 20 2 HOH HOH H . P 5 HOH 2 21 6 HOH HOH H . P 5 HOH 3 22 14 HOH HOH H . P 5 HOH 4 23 19 HOH HOH H . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 2 ? CG ? A GLU 5 CG 2 1 Y 1 A GLU 2 ? CD ? A GLU 5 CD 3 1 Y 1 A GLU 2 ? OE1 ? A GLU 5 OE1 4 1 Y 1 A GLU 2 ? OE2 ? A GLU 5 OE2 5 1 Y 1 B GLU 2 ? CG ? B GLU 5 CG 6 1 Y 1 B GLU 2 ? CD ? B GLU 5 CD 7 1 Y 1 B GLU 2 ? OE1 ? B GLU 5 OE1 8 1 Y 1 B GLU 2 ? OE2 ? B GLU 5 OE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 SCALA 3.3.9 2008/10/21 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 PHASER 2.1.4 'Thu Nov 13 10:53:32 2008' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MxCuBE . ? ? ? ? 'data collection' ? ? ? # _cell.length_a 47.490 _cell.length_b 147.100 _cell.length_c 47.780 _cell.angle_alpha 90.000 _cell.angle_beta 93.680 _cell.angle_gamma 90.000 _cell.entry_id 3UFD _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3UFD _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3UFD _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.71 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1 M SPG buffer, 25% w/v PEG 1500, 10 uM Spermidine, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-11-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double crystal, Si(111) or Si(311)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9395 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9395 _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 # _reflns.entry_id 3UFD _reflns.d_resolution_high 2.700 _reflns.d_resolution_low 73.550 _reflns.number_all 17783 _reflns.number_obs 17783 _reflns.pdbx_netI_over_sigmaI 12.100 _reflns.pdbx_Rsym_value 0.066 _reflns.pdbx_redundancy 3.400 _reflns.percent_possible_obs 98.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.700 2.850 ? 9157 ? 0.201 3.800 0.201 ? 3.500 ? 2610 99.700 1 1 2.850 3.020 ? 8705 ? 0.150 4.900 0.150 ? 3.500 ? 2481 99.600 2 1 3.020 3.230 ? 8061 ? 0.110 6.400 0.110 ? 3.500 ? 2298 99.500 3 1 3.230 3.490 ? 7504 ? 0.069 9.000 0.069 ? 3.500 ? 2155 99.500 4 1 3.490 3.820 ? 6877 ? 0.058 10.500 0.058 ? 3.500 ? 1989 99.500 5 1 3.820 4.270 ? 6230 ? 0.058 9.600 0.058 ? 3.400 ? 1812 99.400 6 1 4.270 4.930 ? 5310 ? 0.063 9.400 0.063 ? 3.400 ? 1563 98.300 7 1 4.930 6.040 ? 4098 ? 0.060 9.900 0.060 ? 3.200 ? 1300 96.100 8 1 6.040 8.540 ? 3649 ? 0.045 8.900 0.045 ? 3.500 ? 1044 99.900 9 1 8.540 45.358 ? 1759 ? 0.043 10.400 0.043 ? 3.300 ? 531 89.900 10 1 # _refine.entry_id 3UFD _refine.ls_d_res_high 2.8000 _refine.ls_d_res_low 45.3600 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.7100 _refine.ls_number_reflns_obs 15885 _refine.ls_number_reflns_all 22705 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2072 _refine.ls_R_factor_R_work 0.2057 _refine.ls_wR_factor_R_work 0.2154 _refine.ls_R_factor_R_free 0.2367 _refine.ls_wR_factor_R_free 0.2464 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 791 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 50.880 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[2][2] -0.1400 _refine.aniso_B[3][3] 0.1300 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0100 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9140 _refine.correlation_coeff_Fo_to_Fc_free 0.8890 _refine.overall_SU_R_Cruickshank_DPI 0.3047 _refine.overall_SU_R_free 0.3502 _refine.pdbx_overall_ESU_R_Free 0.3500 _refine.overall_SU_ML 0.2790 _refine.overall_SU_B 31.7620 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8426 _refine.B_iso_max 61.570 _refine.B_iso_min 7.200 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2479 _refine_hist.pdbx_number_atoms_nucleic_acid 1546 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 13 _refine_hist.number_atoms_total 4039 _refine_hist.d_res_high 2.8000 _refine_hist.d_res_low 45.3600 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 4233 0.009 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 5998 1.520 2.447 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 301 4.714 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 99 28.486 24.141 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 560 16.973 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 16 25.046 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 701 0.067 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2498 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1509 0.359 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2450 0.719 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 2724 1.146 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 3548 1.897 4.500 ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ordinal 'X-RAY DIFFRACTION' 1 1 'TIGHT POSITIONAL' A 610 0.020 0.040 ? ? ? ? ? ? 1 'X-RAY DIFFRACTION' 1 2 'TIGHT POSITIONAL' B 610 0.030 0.040 ? ? ? ? ? ? 2 'X-RAY DIFFRACTION' 1 3 'TIGHT POSITIONAL' E 610 0.020 0.040 ? ? ? ? ? ? 3 'X-RAY DIFFRACTION' 1 4 'TIGHT POSITIONAL' F 610 0.030 0.040 ? ? ? ? ? ? 4 'X-RAY DIFFRACTION' 1 1 'TIGHT THERMAL' A 610 0.060 0.500 ? ? ? ? ? ? 5 'X-RAY DIFFRACTION' 1 2 'TIGHT THERMAL' B 610 0.060 0.500 ? ? ? ? ? ? 6 'X-RAY DIFFRACTION' 1 3 'TIGHT THERMAL' E 610 0.050 0.500 ? ? ? ? ? ? 7 'X-RAY DIFFRACTION' 1 4 'TIGHT THERMAL' F 610 0.060 0.500 ? ? ? ? ? ? 8 # _refine_ls_shell.d_res_high 2.8000 _refine_ls_shell.d_res_low 2.8730 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.8300 _refine_ls_shell.number_reflns_R_work 1106 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2650 _refine_ls_shell.R_factor_R_free 0.3550 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1148 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 1 3 E 1 4 F # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 1 1 1 A 2 A 78 ? . . . . . . . . ? ? 1 2 1 1 B 2 B 78 ? . . . . . . . . ? ? 1 3 1 1 E 2 E 78 ? . . . . . . . . ? ? 1 4 1 1 F 2 F 78 ? . . . . . . . . ? ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3UFD _struct.title 'C.Esp1396I bound to its highest affinity operator site OM' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UFD _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'Helix-turn-helix, bacterial gene regulatory protein, DNA BINDING PROTEIN-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q8GGH0_9ENTR Q8GGH0 1 MESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD 1 ? 2 PDB 3UFD 3UFD 2 ? ? ? 3 PDB 3UFD 3UFD 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3UFD A 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 2 1 3UFD B 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 3 1 3UFD E 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 4 1 3UFD F 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 5 2 3UFD C 1 ? 19 ? 3UFD 1 ? 19 ? 1 19 6 2 3UFD G 1 ? 19 ? 3UFD 1 ? 19 ? 1 19 7 3 3UFD D 1 ? 19 ? 3UFD 1 ? 19 ? 1 19 8 3 3UFD H 1 ? 19 ? 3UFD 1 ? 19 ? 1 19 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3UFD GLY A 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 1 1 3UFD SER A 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 2 1 3UFD HIS A 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 3 2 3UFD GLY B 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 4 2 3UFD SER B 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 5 2 3UFD HIS B 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 6 3 3UFD GLY E 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 7 3 3UFD SER E 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 8 3 3UFD HIS E 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 9 4 3UFD GLY F 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 10 4 3UFD SER F 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 11 4 3UFD HIS F 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 12 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 author_and_software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6690 ? 1 MORE -47 ? 1 'SSA (A^2)' 12220 ? 2 'ABSA (A^2)' 6680 ? 2 MORE -45 ? 2 'SSA (A^2)' 12100 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,I,J,K,L 2 1 E,F,G,H,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? LYS A 23 ? SER A 3 LYS A 20 1 ? 18 HELX_P HELX_P2 2 THR A 26 ? ASN A 35 ? THR A 23 ASN A 32 1 ? 10 HELX_P HELX_P3 3 ASP A 37 ? SER A 48 ? ASP A 34 SER A 45 1 ? 12 HELX_P HELX_P4 4 THR A 52 ? LEU A 63 ? THR A 49 LEU A 60 1 ? 12 HELX_P HELX_P5 5 SER A 66 ? LYS A 80 ? SER A 63 LYS A 77 1 ? 15 HELX_P HELX_P6 6 SER B 6 ? LYS B 23 ? SER B 3 LYS B 20 1 ? 18 HELX_P HELX_P7 7 THR B 26 ? ASN B 35 ? THR B 23 ASN B 32 1 ? 10 HELX_P HELX_P8 8 ASP B 37 ? SER B 48 ? ASP B 34 SER B 45 1 ? 12 HELX_P HELX_P9 9 THR B 52 ? LEU B 63 ? THR B 49 LEU B 60 1 ? 12 HELX_P HELX_P10 10 SER B 66 ? LYS B 80 ? SER B 63 LYS B 77 1 ? 15 HELX_P HELX_P11 11 SER E 6 ? LYS E 23 ? SER E 3 LYS E 20 1 ? 18 HELX_P HELX_P12 12 THR E 26 ? ASN E 35 ? THR E 23 ASN E 32 1 ? 10 HELX_P HELX_P13 13 ASP E 37 ? SER E 48 ? ASP E 34 SER E 45 1 ? 12 HELX_P HELX_P14 14 THR E 52 ? LEU E 63 ? THR E 49 LEU E 60 1 ? 12 HELX_P HELX_P15 15 SER E 66 ? LYS E 80 ? SER E 63 LYS E 77 1 ? 15 HELX_P HELX_P16 16 PHE F 7 ? LYS F 23 ? PHE F 4 LYS F 20 1 ? 17 HELX_P HELX_P17 17 THR F 26 ? ASN F 35 ? THR F 23 ASN F 32 1 ? 10 HELX_P HELX_P18 18 ASP F 37 ? SER F 48 ? ASP F 34 SER F 45 1 ? 12 HELX_P HELX_P19 19 THR F 52 ? LEU F 63 ? THR F 49 LEU F 60 1 ? 12 HELX_P HELX_P20 20 SER F 66 ? LYS F 80 ? SER F 63 LYS F 77 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DA 1 N1 ? ? ? 1_555 H DT 1 N3 ? ? C DA 1 H DT 1 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog2 hydrog ? ? C DT 2 N3 ? ? ? 1_555 D DA 19 N1 ? ? C DT 2 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DT 2 O4 ? ? ? 1_555 D DA 19 N6 ? ? C DT 2 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 18 N3 ? ? C DG 3 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 18 O2 ? ? C DG 3 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 18 N4 ? ? C DG 3 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 17 N1 ? ? C DT 4 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 17 N6 ? ? C DT 4 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 16 N3 ? ? C DA 5 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 16 O4 ? ? C DA 5 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 15 N3 ? ? C DG 6 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 15 O2 ? ? C DG 6 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 15 N4 ? ? C DG 6 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 14 N3 ? ? C DA 7 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 14 O4 ? ? C DA 7 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 13 N1 ? ? C DC 8 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 13 O6 ? ? C DC 8 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 13 N2 ? ? C DC 8 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 12 N1 ? ? C DT 9 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 12 N6 ? ? C DT 9 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 11 N3 ? ? C DA 10 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 11 O4 ? ? C DA 10 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 10 N1 ? ? C DT 11 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 10 N6 ? ? C DT 11 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 9 N3 ? ? C DA 12 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 9 O4 ? ? C DA 12 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 13 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 13 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 13 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 13 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 13 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 13 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT 14 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT 14 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 15 N3 ? ? ? 1_555 D DG 6 N1 ? ? C DC 15 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 15 N4 ? ? ? 1_555 D DG 6 O6 ? ? C DC 15 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 15 O2 ? ? ? 1_555 D DG 6 N2 ? ? C DC 15 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 16 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 16 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 16 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 16 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 16 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 16 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DA 17 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 17 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 17 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 17 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 18 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 18 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 18 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 18 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 18 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 18 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DA 19 N1 ? ? ? 1_555 D DT 2 N3 ? ? C DA 19 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DA 19 N6 ? ? ? 1_555 D DT 2 O4 ? ? C DA 19 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? G DT 2 N3 ? ? ? 1_555 H DA 19 N1 ? ? G DT 2 H DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? G DT 2 O4 ? ? ? 1_555 H DA 19 N6 ? ? G DT 2 H DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? G DG 3 N1 ? ? ? 1_555 H DC 18 N3 ? ? G DG 3 H DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? G DG 3 N2 ? ? ? 1_555 H DC 18 O2 ? ? G DG 3 H DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? G DG 3 O6 ? ? ? 1_555 H DC 18 N4 ? ? G DG 3 H DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? G DT 4 N3 ? ? ? 1_555 H DA 17 N1 ? ? G DT 4 H DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? G DT 4 O4 ? ? ? 1_555 H DA 17 N6 ? ? G DT 4 H DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? G DA 5 N1 ? ? ? 1_555 H DT 16 N3 ? ? G DA 5 H DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? G DA 5 N6 ? ? ? 1_555 H DT 16 O4 ? ? G DA 5 H DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? G DG 6 N1 ? ? ? 1_555 H DC 15 N3 ? ? G DG 6 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? G DG 6 N2 ? ? ? 1_555 H DC 15 O2 ? ? G DG 6 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? G DG 6 O6 ? ? ? 1_555 H DC 15 N4 ? ? G DG 6 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? G DA 7 N1 ? ? ? 1_555 H DT 14 N3 ? ? G DA 7 H DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? G DA 7 N6 ? ? ? 1_555 H DT 14 O4 ? ? G DA 7 H DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? G DC 8 N3 ? ? ? 1_555 H DG 13 N1 ? ? G DC 8 H DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? G DC 8 N4 ? ? ? 1_555 H DG 13 O6 ? ? G DC 8 H DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? G DC 8 O2 ? ? ? 1_555 H DG 13 N2 ? ? G DC 8 H DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? G DT 9 N3 ? ? ? 1_555 H DA 12 N1 ? ? G DT 9 H DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? G DT 9 O4 ? ? ? 1_555 H DA 12 N6 ? ? G DT 9 H DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? G DA 10 N1 ? ? ? 1_555 H DT 11 N3 ? ? G DA 10 H DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? G DA 10 N6 ? ? ? 1_555 H DT 11 O4 ? ? G DA 10 H DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? G DT 11 N3 ? ? ? 1_555 H DA 10 N1 ? ? G DT 11 H DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? G DT 11 O4 ? ? ? 1_555 H DA 10 N6 ? ? G DT 11 H DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? G DA 12 N1 ? ? ? 1_555 H DT 9 N3 ? ? G DA 12 H DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? G DA 12 N6 ? ? ? 1_555 H DT 9 O4 ? ? G DA 12 H DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? G DG 13 N1 ? ? ? 1_555 H DC 8 N3 ? ? G DG 13 H DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? G DG 13 N2 ? ? ? 1_555 H DC 8 O2 ? ? G DG 13 H DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? G DG 13 O6 ? ? ? 1_555 H DC 8 N4 ? ? G DG 13 H DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? G DT 14 N3 ? ? ? 1_555 H DA 7 N1 ? ? G DT 14 H DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? G DT 14 O4 ? ? ? 1_555 H DA 7 N6 ? ? G DT 14 H DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? G DC 15 N3 ? ? ? 1_555 H DG 6 N1 ? ? G DC 15 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? G DC 15 N4 ? ? ? 1_555 H DG 6 O6 ? ? G DC 15 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? G DC 15 O2 ? ? ? 1_555 H DG 6 N2 ? ? G DC 15 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? G DG 16 N1 ? ? ? 1_555 H DC 5 N3 ? ? G DG 16 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? G DG 16 N2 ? ? ? 1_555 H DC 5 O2 ? ? G DG 16 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? G DG 16 O6 ? ? ? 1_555 H DC 5 N4 ? ? G DG 16 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? G DA 17 N1 ? ? ? 1_555 H DT 4 N3 ? ? G DA 17 H DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? G DA 17 N6 ? ? ? 1_555 H DT 4 O4 ? ? G DA 17 H DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? G DC 18 N3 ? ? ? 1_555 H DG 3 N1 ? ? G DC 18 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? G DC 18 N4 ? ? ? 1_555 H DG 3 O6 ? ? G DC 18 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? G DC 18 O2 ? ? ? 1_555 H DG 3 N2 ? ? G DC 18 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? G DA 19 N1 ? ? ? 1_555 H DT 2 N3 ? ? G DA 19 H DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? G DA 19 N6 ? ? ? 1_555 H DT 2 O4 ? ? G DA 19 H DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 H _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 11 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 H _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 11 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.378 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.041 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C2 C DA 1 ? ? N3 C DA 1 ? ? C4 C DA 1 ? ? 105.96 110.60 -4.64 0.50 N 2 1 "O4'" C DA 7 ? ? "C1'" C DA 7 ? ? N9 C DA 7 ? ? 110.35 108.30 2.05 0.30 N 3 1 "O4'" C DC 8 ? ? "C1'" C DC 8 ? ? N1 C DC 8 ? ? 113.11 108.30 4.81 0.30 N 4 1 "C3'" C DT 11 ? ? "C2'" C DT 11 ? ? "C1'" C DT 11 ? ? 95.55 102.40 -6.85 0.80 N 5 1 "O4'" C DT 11 ? ? "C1'" C DT 11 ? ? N1 C DT 11 ? ? 112.33 108.30 4.03 0.30 N 6 1 "C3'" C DA 12 ? ? "O3'" C DA 12 ? ? P C DG 13 ? ? 127.67 119.70 7.97 1.20 Y 7 1 "O4'" C DC 15 ? ? "C1'" C DC 15 ? ? N1 C DC 15 ? ? 110.18 108.30 1.88 0.30 N 8 1 "O4'" C DC 18 ? ? "C1'" C DC 18 ? ? N1 C DC 18 ? ? 111.32 108.30 3.02 0.30 N 9 1 "O4'" C DA 19 ? ? "C1'" C DA 19 ? ? N9 C DA 19 ? ? 112.31 108.30 4.01 0.30 N 10 1 "C3'" D DT 2 ? ? "O3'" D DT 2 ? ? P D DG 3 ? ? 129.67 119.70 9.97 1.20 Y 11 1 "O4'" D DC 8 ? ? "C1'" D DC 8 ? ? N1 D DC 8 ? ? 110.38 108.30 2.08 0.30 N 12 1 "C3'" D DT 11 ? ? "C2'" D DT 11 ? ? "C1'" D DT 11 ? ? 97.52 102.40 -4.88 0.80 N 13 1 "O4'" D DT 11 ? ? "C1'" D DT 11 ? ? N1 D DT 11 ? ? 111.43 108.30 3.13 0.30 N 14 1 "C3'" D DA 12 ? ? "O3'" D DA 12 ? ? P D DG 13 ? ? 128.89 119.70 9.19 1.20 Y 15 1 "C3'" D DG 13 ? ? "O3'" D DG 13 ? ? P D DT 14 ? ? 127.94 119.70 8.24 1.20 Y 16 1 "O4'" D DT 14 ? ? "C1'" D DT 14 ? ? N1 D DT 14 ? ? 101.46 108.00 -6.54 0.70 N 17 1 N3 D DT 14 ? ? C4 D DT 14 ? ? O4 D DT 14 ? ? 123.80 119.90 3.90 0.60 N 18 1 C5 D DT 14 ? ? C4 D DT 14 ? ? O4 D DT 14 ? ? 120.57 124.90 -4.33 0.70 N 19 1 "O4'" D DT 16 ? ? "C1'" D DT 16 ? ? N1 D DT 16 ? ? 113.16 108.30 4.86 0.30 N 20 1 "O4'" D DA 17 ? ? "C1'" D DA 17 ? ? N9 D DA 17 ? ? 110.35 108.30 2.05 0.30 N 21 1 "O4'" D DC 18 ? ? "C1'" D DC 18 ? ? N1 D DC 18 ? ? 110.44 108.30 2.14 0.30 N 22 1 "O4'" D DA 19 ? ? "C1'" D DA 19 ? ? N9 D DA 19 ? ? 111.82 108.30 3.52 0.30 N 23 1 "C3'" G DA 1 ? ? "C2'" G DA 1 ? ? "C1'" G DA 1 ? ? 96.32 102.40 -6.08 0.80 N 24 1 N3 G DA 1 ? ? C4 G DA 1 ? ? C5 G DA 1 ? ? 131.24 126.80 4.44 0.70 N 25 1 N3 G DT 2 ? ? C2 G DT 2 ? ? O2 G DT 2 ? ? 118.60 122.30 -3.70 0.60 N 26 1 "O4'" G DG 3 ? ? "C1'" G DG 3 ? ? N9 G DG 3 ? ? 102.92 108.00 -5.08 0.70 N 27 1 "O4'" G DA 5 ? ? "C1'" G DA 5 ? ? N9 G DA 5 ? ? 110.27 108.30 1.97 0.30 N 28 1 "O4'" G DG 6 ? ? "C1'" G DG 6 ? ? N9 G DG 6 ? ? 112.70 108.30 4.40 0.30 N 29 1 "O4'" G DA 7 ? ? "C1'" G DA 7 ? ? N9 G DA 7 ? ? 111.77 108.30 3.47 0.30 N 30 1 "O4'" G DC 8 ? ? "C1'" G DC 8 ? ? N1 G DC 8 ? ? 114.67 108.30 6.37 0.30 N 31 1 "O4'" G DA 10 ? ? "C1'" G DA 10 ? ? N9 G DA 10 ? ? 102.82 108.00 -5.18 0.70 N 32 1 "C3'" G DT 11 ? ? "C2'" G DT 11 ? ? "C1'" G DT 11 ? ? 94.55 102.40 -7.85 0.80 N 33 1 "O4'" G DA 12 ? ? "C1'" G DA 12 ? ? N9 G DA 12 ? ? 103.01 108.00 -4.99 0.70 N 34 1 "O4'" G DG 13 ? ? "C1'" G DG 13 ? ? N9 G DG 13 ? ? 111.31 108.30 3.01 0.30 N 35 1 "C3'" G DG 13 ? ? "O3'" G DG 13 ? ? P G DT 14 ? ? 131.12 119.70 11.42 1.20 Y 36 1 N3 G DT 14 ? ? C4 G DT 14 ? ? O4 G DT 14 ? ? 123.55 119.90 3.65 0.60 N 37 1 "O4'" G DC 15 ? ? "C1'" G DC 15 ? ? N1 G DC 15 ? ? 111.12 108.30 2.82 0.30 N 38 1 "C3'" G DA 17 ? ? "O3'" G DA 17 ? ? P G DC 18 ? ? 127.43 119.70 7.73 1.20 Y 39 1 "O4'" G DA 19 ? ? "C1'" G DA 19 ? ? N9 G DA 19 ? ? 110.71 108.30 2.41 0.30 N 40 1 C4 H DT 1 ? ? C5 H DT 1 ? ? C7 H DT 1 ? ? 122.66 119.00 3.66 0.60 N 41 1 C6 H DT 1 ? ? C5 H DT 1 ? ? C7 H DT 1 ? ? 118.98 122.90 -3.92 0.60 N 42 1 "C3'" H DT 2 ? ? "O3'" H DT 2 ? ? P H DG 3 ? ? 128.37 119.70 8.67 1.20 Y 43 1 "O4'" H DG 3 ? ? "C1'" H DG 3 ? ? N9 H DG 3 ? ? 102.96 108.00 -5.04 0.70 N 44 1 "C3'" H DT 4 ? ? "C2'" H DT 4 ? ? "C1'" H DT 4 ? ? 97.48 102.40 -4.92 0.80 N 45 1 "C3'" H DC 5 ? ? "C2'" H DC 5 ? ? "C1'" H DC 5 ? ? 97.08 102.40 -5.32 0.80 N 46 1 "O4'" H DC 5 ? ? "C1'" H DC 5 ? ? N1 H DC 5 ? ? 110.68 108.30 2.38 0.30 N 47 1 "C3'" H DG 6 ? ? "C2'" H DG 6 ? ? "C1'" H DG 6 ? ? 96.90 102.40 -5.50 0.80 N 48 1 "O4'" H DG 6 ? ? "C1'" H DG 6 ? ? N9 H DG 6 ? ? 113.68 108.30 5.38 0.30 N 49 1 "O4'" H DC 8 ? ? "C1'" H DC 8 ? ? N1 H DC 8 ? ? 112.35 108.30 4.05 0.30 N 50 1 "O4'" H DA 10 ? ? "C1'" H DA 10 ? ? N9 H DA 10 ? ? 101.28 108.00 -6.72 0.70 N 51 1 "C3'" H DT 11 ? ? "C2'" H DT 11 ? ? "C1'" H DT 11 ? ? 96.27 102.40 -6.13 0.80 N 52 1 "C1'" H DG 13 ? ? "O4'" H DG 13 ? ? "C4'" H DG 13 ? ? 103.38 110.10 -6.72 1.00 N 53 1 "O4'" H DG 13 ? ? "C1'" H DG 13 ? ? N9 H DG 13 ? ? 113.75 108.30 5.45 0.30 N 54 1 "O4'" H DT 16 ? ? "C1'" H DT 16 ? ? N1 H DT 16 ? ? 110.26 108.30 1.96 0.30 N 55 1 C4 H DT 16 ? ? C5 H DT 16 ? ? C7 H DT 16 ? ? 122.95 119.00 3.95 0.60 N 56 1 "O4'" H DC 18 ? ? "C1'" H DC 18 ? ? N1 H DC 18 ? ? 111.27 108.30 2.97 0.30 N 57 1 "C3'" H DC 18 ? ? "O3'" H DC 18 ? ? P H DA 19 ? ? 126.99 119.70 7.29 1.20 Y # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LYS _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 77 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 HIS _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 78 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 34.67 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 11.7220 8.2790 8.8050 0.1363 0.1363 0.0939 -0.0395 0.0828 -0.0294 1.1355 1.7215 7.1282 -0.5518 2.1264 1.0775 -0.0788 -0.1652 0.2439 -0.1106 0.0531 0.1188 0.1725 -0.0405 -0.4802 'X-RAY DIFFRACTION' 2 ? refined 10.9740 -1.9060 -8.8870 0.1056 0.0866 0.0334 -0.0883 0.0026 -0.0136 3.7921 2.1164 7.4291 0.2754 -1.6984 1.9939 -0.0448 -0.0876 0.1323 0.1420 -0.1839 0.1850 -0.0233 0.1804 -0.4365 'X-RAY DIFFRACTION' 3 ? refined 29.4190 1.4610 1.1850 0.0721 0.1458 0.2209 0.0027 -0.0146 -0.0458 2.1933 5.5465 5.2736 -0.4670 -0.5251 4.9985 0.0376 0.7910 -0.8286 0.0170 -0.1353 -0.5610 0.0528 0.0879 0.5973 'X-RAY DIFFRACTION' 4 ? refined 28.8980 -1.1790 0.9930 0.1750 0.1601 0.1463 0.0215 -0.0718 -0.0523 2.1584 3.5245 5.7293 0.9032 1.4242 4.0581 0.2027 0.5437 -0.7464 -0.0400 -0.1569 -0.5113 0.4824 0.5170 0.4151 'X-RAY DIFFRACTION' 5 ? refined -6.5920 42.8300 12.1790 0.0945 0.0819 0.1020 0.0319 -0.0076 0.0632 9.4788 2.1462 3.5925 -2.5183 -1.3013 -0.3089 0.2246 -0.1408 -0.0838 0.4726 0.0465 0.2045 -0.1937 -0.2697 -0.0558 'X-RAY DIFFRACTION' 6 ? refined 10.9470 32.4080 12.4870 0.1589 0.0959 0.0644 0.0575 0.0446 0.0329 7.2491 2.5294 2.7099 -2.5838 2.2054 0.6256 0.3355 -0.1826 -0.1529 0.6491 -0.1135 -0.0457 -0.2311 0.2545 0.1984 'X-RAY DIFFRACTION' 7 ? refined 1.8940 40.2220 30.2470 0.1944 0.2367 0.1089 0.0974 -0.0394 0.0538 4.9831 3.4107 2.1222 -3.8108 1.7912 -0.9857 -0.7845 0.6257 0.1588 -0.4883 0.2806 -0.1734 0.5684 -0.2276 -0.0087 'X-RAY DIFFRACTION' 8 ? refined 2.1210 37.4480 30.3260 0.1037 0.1503 0.0175 0.1005 0.0321 0.0453 5.0957 3.2658 2.0206 -3.1713 -0.6801 0.2640 -0.5120 0.5679 -0.0559 -0.7067 -0.1683 0.2082 0.4228 -0.0709 -0.0853 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 77 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 2 B 78 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 C 1 C 19 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 D 1 D 19 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 E 2 E 77 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 F 3 F 78 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 G 1 G 19 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 H 1 H 19 ? . . . . ? # _pdbx_phasing_MR.entry_id 3UFD _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 33.020 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.700 _pdbx_phasing_MR.d_res_low_rotation 45.360 _pdbx_phasing_MR.d_res_high_translation 2.700 _pdbx_phasing_MR.d_res_low_translation 45.360 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A HIS 78 ? A HIS 81 6 1 Y 1 A ASP 79 ? A ASP 82 7 1 Y 1 B GLY -2 ? B GLY 1 8 1 Y 1 B SER -1 ? B SER 2 9 1 Y 1 B HIS 0 ? B HIS 3 10 1 Y 1 B MET 1 ? B MET 4 11 1 Y 1 B ASP 79 ? B ASP 82 12 1 Y 1 E GLY -2 ? E GLY 1 13 1 Y 1 E SER -1 ? E SER 2 14 1 Y 1 E HIS 0 ? E HIS 3 15 1 Y 1 E MET 1 ? E MET 4 16 1 Y 1 E HIS 78 ? E HIS 81 17 1 Y 1 E ASP 79 ? E ASP 82 18 1 Y 1 F GLY -2 ? F GLY 1 19 1 Y 1 F SER -1 ? F SER 2 20 1 Y 1 F HIS 0 ? F HIS 3 21 1 Y 1 F MET 1 ? F MET 4 22 1 Y 1 F GLU 2 ? F GLU 5 23 1 Y 1 F ASP 79 ? F ASP 82 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 DA OP3 O N N 75 DA P P N N 76 DA OP1 O N N 77 DA OP2 O N N 78 DA "O5'" O N N 79 DA "C5'" C N N 80 DA "C4'" C N R 81 DA "O4'" O N N 82 DA "C3'" C N S 83 DA "O3'" O N N 84 DA "C2'" C N N 85 DA "C1'" C N R 86 DA N9 N Y N 87 DA C8 C Y N 88 DA N7 N Y N 89 DA C5 C Y N 90 DA C6 C Y N 91 DA N6 N N N 92 DA N1 N Y N 93 DA C2 C Y N 94 DA N3 N Y N 95 DA C4 C Y N 96 DA HOP3 H N N 97 DA HOP2 H N N 98 DA "H5'" H N N 99 DA "H5''" H N N 100 DA "H4'" H N N 101 DA "H3'" H N N 102 DA "HO3'" H N N 103 DA "H2'" H N N 104 DA "H2''" H N N 105 DA "H1'" H N N 106 DA H8 H N N 107 DA H61 H N N 108 DA H62 H N N 109 DA H2 H N N 110 DC OP3 O N N 111 DC P P N N 112 DC OP1 O N N 113 DC OP2 O N N 114 DC "O5'" O N N 115 DC "C5'" C N N 116 DC "C4'" C N R 117 DC "O4'" O N N 118 DC "C3'" C N S 119 DC "O3'" O N N 120 DC "C2'" C N N 121 DC "C1'" C N R 122 DC N1 N N N 123 DC C2 C N N 124 DC O2 O N N 125 DC N3 N N N 126 DC C4 C N N 127 DC N4 N N N 128 DC C5 C N N 129 DC C6 C N N 130 DC HOP3 H N N 131 DC HOP2 H N N 132 DC "H5'" H N N 133 DC "H5''" H N N 134 DC "H4'" H N N 135 DC "H3'" H N N 136 DC "HO3'" H N N 137 DC "H2'" H N N 138 DC "H2''" H N N 139 DC "H1'" H N N 140 DC H41 H N N 141 DC H42 H N N 142 DC H5 H N N 143 DC H6 H N N 144 DG OP3 O N N 145 DG P P N N 146 DG OP1 O N N 147 DG OP2 O N N 148 DG "O5'" O N N 149 DG "C5'" C N N 150 DG "C4'" C N R 151 DG "O4'" O N N 152 DG "C3'" C N S 153 DG "O3'" O N N 154 DG "C2'" C N N 155 DG "C1'" C N R 156 DG N9 N Y N 157 DG C8 C Y N 158 DG N7 N Y N 159 DG C5 C Y N 160 DG C6 C N N 161 DG O6 O N N 162 DG N1 N N N 163 DG C2 C N N 164 DG N2 N N N 165 DG N3 N N N 166 DG C4 C Y N 167 DG HOP3 H N N 168 DG HOP2 H N N 169 DG "H5'" H N N 170 DG "H5''" H N N 171 DG "H4'" H N N 172 DG "H3'" H N N 173 DG "HO3'" H N N 174 DG "H2'" H N N 175 DG "H2''" H N N 176 DG "H1'" H N N 177 DG H8 H N N 178 DG H1 H N N 179 DG H21 H N N 180 DG H22 H N N 181 DT OP3 O N N 182 DT P P N N 183 DT OP1 O N N 184 DT OP2 O N N 185 DT "O5'" O N N 186 DT "C5'" C N N 187 DT "C4'" C N R 188 DT "O4'" O N N 189 DT "C3'" C N S 190 DT "O3'" O N N 191 DT "C2'" C N N 192 DT "C1'" C N R 193 DT N1 N N N 194 DT C2 C N N 195 DT O2 O N N 196 DT N3 N N N 197 DT C4 C N N 198 DT O4 O N N 199 DT C5 C N N 200 DT C7 C N N 201 DT C6 C N N 202 DT HOP3 H N N 203 DT HOP2 H N N 204 DT "H5'" H N N 205 DT "H5''" H N N 206 DT "H4'" H N N 207 DT "H3'" H N N 208 DT "HO3'" H N N 209 DT "H2'" H N N 210 DT "H2''" H N N 211 DT "H1'" H N N 212 DT H3 H N N 213 DT H71 H N N 214 DT H72 H N N 215 DT H73 H N N 216 DT H6 H N N 217 GLN N N N N 218 GLN CA C N S 219 GLN C C N N 220 GLN O O N N 221 GLN CB C N N 222 GLN CG C N N 223 GLN CD C N N 224 GLN OE1 O N N 225 GLN NE2 N N N 226 GLN OXT O N N 227 GLN H H N N 228 GLN H2 H N N 229 GLN HA H N N 230 GLN HB2 H N N 231 GLN HB3 H N N 232 GLN HG2 H N N 233 GLN HG3 H N N 234 GLN HE21 H N N 235 GLN HE22 H N N 236 GLN HXT H N N 237 GLU N N N N 238 GLU CA C N S 239 GLU C C N N 240 GLU O O N N 241 GLU CB C N N 242 GLU CG C N N 243 GLU CD C N N 244 GLU OE1 O N N 245 GLU OE2 O N N 246 GLU OXT O N N 247 GLU H H N N 248 GLU H2 H N N 249 GLU HA H N N 250 GLU HB2 H N N 251 GLU HB3 H N N 252 GLU HG2 H N N 253 GLU HG3 H N N 254 GLU HE2 H N N 255 GLU HXT H N N 256 GLY N N N N 257 GLY CA C N N 258 GLY C C N N 259 GLY O O N N 260 GLY OXT O N N 261 GLY H H N N 262 GLY H2 H N N 263 GLY HA2 H N N 264 GLY HA3 H N N 265 GLY HXT H N N 266 HIS N N N N 267 HIS CA C N S 268 HIS C C N N 269 HIS O O N N 270 HIS CB C N N 271 HIS CG C Y N 272 HIS ND1 N Y N 273 HIS CD2 C Y N 274 HIS CE1 C Y N 275 HIS NE2 N Y N 276 HIS OXT O N N 277 HIS H H N N 278 HIS H2 H N N 279 HIS HA H N N 280 HIS HB2 H N N 281 HIS HB3 H N N 282 HIS HD1 H N N 283 HIS HD2 H N N 284 HIS HE1 H N N 285 HIS HE2 H N N 286 HIS HXT H N N 287 HOH O O N N 288 HOH H1 H N N 289 HOH H2 H N N 290 ILE N N N N 291 ILE CA C N S 292 ILE C C N N 293 ILE O O N N 294 ILE CB C N S 295 ILE CG1 C N N 296 ILE CG2 C N N 297 ILE CD1 C N N 298 ILE OXT O N N 299 ILE H H N N 300 ILE H2 H N N 301 ILE HA H N N 302 ILE HB H N N 303 ILE HG12 H N N 304 ILE HG13 H N N 305 ILE HG21 H N N 306 ILE HG22 H N N 307 ILE HG23 H N N 308 ILE HD11 H N N 309 ILE HD12 H N N 310 ILE HD13 H N N 311 ILE HXT H N N 312 LEU N N N N 313 LEU CA C N S 314 LEU C C N N 315 LEU O O N N 316 LEU CB C N N 317 LEU CG C N N 318 LEU CD1 C N N 319 LEU CD2 C N N 320 LEU OXT O N N 321 LEU H H N N 322 LEU H2 H N N 323 LEU HA H N N 324 LEU HB2 H N N 325 LEU HB3 H N N 326 LEU HG H N N 327 LEU HD11 H N N 328 LEU HD12 H N N 329 LEU HD13 H N N 330 LEU HD21 H N N 331 LEU HD22 H N N 332 LEU HD23 H N N 333 LEU HXT H N N 334 LYS N N N N 335 LYS CA C N S 336 LYS C C N N 337 LYS O O N N 338 LYS CB C N N 339 LYS CG C N N 340 LYS CD C N N 341 LYS CE C N N 342 LYS NZ N N N 343 LYS OXT O N N 344 LYS H H N N 345 LYS H2 H N N 346 LYS HA H N N 347 LYS HB2 H N N 348 LYS HB3 H N N 349 LYS HG2 H N N 350 LYS HG3 H N N 351 LYS HD2 H N N 352 LYS HD3 H N N 353 LYS HE2 H N N 354 LYS HE3 H N N 355 LYS HZ1 H N N 356 LYS HZ2 H N N 357 LYS HZ3 H N N 358 LYS HXT H N N 359 MET N N N N 360 MET CA C N S 361 MET C C N N 362 MET O O N N 363 MET CB C N N 364 MET CG C N N 365 MET SD S N N 366 MET CE C N N 367 MET OXT O N N 368 MET H H N N 369 MET H2 H N N 370 MET HA H N N 371 MET HB2 H N N 372 MET HB3 H N N 373 MET HG2 H N N 374 MET HG3 H N N 375 MET HE1 H N N 376 MET HE2 H N N 377 MET HE3 H N N 378 MET HXT H N N 379 PHE N N N N 380 PHE CA C N S 381 PHE C C N N 382 PHE O O N N 383 PHE CB C N N 384 PHE CG C Y N 385 PHE CD1 C Y N 386 PHE CD2 C Y N 387 PHE CE1 C Y N 388 PHE CE2 C Y N 389 PHE CZ C Y N 390 PHE OXT O N N 391 PHE H H N N 392 PHE H2 H N N 393 PHE HA H N N 394 PHE HB2 H N N 395 PHE HB3 H N N 396 PHE HD1 H N N 397 PHE HD2 H N N 398 PHE HE1 H N N 399 PHE HE2 H N N 400 PHE HZ H N N 401 PHE HXT H N N 402 SER N N N N 403 SER CA C N S 404 SER C C N N 405 SER O O N N 406 SER CB C N N 407 SER OG O N N 408 SER OXT O N N 409 SER H H N N 410 SER H2 H N N 411 SER HA H N N 412 SER HB2 H N N 413 SER HB3 H N N 414 SER HG H N N 415 SER HXT H N N 416 THR N N N N 417 THR CA C N S 418 THR C C N N 419 THR O O N N 420 THR CB C N R 421 THR OG1 O N N 422 THR CG2 C N N 423 THR OXT O N N 424 THR H H N N 425 THR H2 H N N 426 THR HA H N N 427 THR HB H N N 428 THR HG1 H N N 429 THR HG21 H N N 430 THR HG22 H N N 431 THR HG23 H N N 432 THR HXT H N N 433 TYR N N N N 434 TYR CA C N S 435 TYR C C N N 436 TYR O O N N 437 TYR CB C N N 438 TYR CG C Y N 439 TYR CD1 C Y N 440 TYR CD2 C Y N 441 TYR CE1 C Y N 442 TYR CE2 C Y N 443 TYR CZ C Y N 444 TYR OH O N N 445 TYR OXT O N N 446 TYR H H N N 447 TYR H2 H N N 448 TYR HA H N N 449 TYR HB2 H N N 450 TYR HB3 H N N 451 TYR HD1 H N N 452 TYR HD2 H N N 453 TYR HE1 H N N 454 TYR HE2 H N N 455 TYR HH H N N 456 TYR HXT H N N 457 VAL N N N N 458 VAL CA C N S 459 VAL C C N N 460 VAL O O N N 461 VAL CB C N N 462 VAL CG1 C N N 463 VAL CG2 C N N 464 VAL OXT O N N 465 VAL H H N N 466 VAL H2 H N N 467 VAL HA H N N 468 VAL HB H N N 469 VAL HG11 H N N 470 VAL HG12 H N N 471 VAL HG13 H N N 472 VAL HG21 H N N 473 VAL HG22 H N N 474 VAL HG23 H N N 475 VAL HXT H N N 476 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 SER N CA sing N N 396 SER N H sing N N 397 SER N H2 sing N N 398 SER CA C sing N N 399 SER CA CB sing N N 400 SER CA HA sing N N 401 SER C O doub N N 402 SER C OXT sing N N 403 SER CB OG sing N N 404 SER CB HB2 sing N N 405 SER CB HB3 sing N N 406 SER OG HG sing N N 407 SER OXT HXT sing N N 408 THR N CA sing N N 409 THR N H sing N N 410 THR N H2 sing N N 411 THR CA C sing N N 412 THR CA CB sing N N 413 THR CA HA sing N N 414 THR C O doub N N 415 THR C OXT sing N N 416 THR CB OG1 sing N N 417 THR CB CG2 sing N N 418 THR CB HB sing N N 419 THR OG1 HG1 sing N N 420 THR CG2 HG21 sing N N 421 THR CG2 HG22 sing N N 422 THR CG2 HG23 sing N N 423 THR OXT HXT sing N N 424 TYR N CA sing N N 425 TYR N H sing N N 426 TYR N H2 sing N N 427 TYR CA C sing N N 428 TYR CA CB sing N N 429 TYR CA HA sing N N 430 TYR C O doub N N 431 TYR C OXT sing N N 432 TYR CB CG sing N N 433 TYR CB HB2 sing N N 434 TYR CB HB3 sing N N 435 TYR CG CD1 doub Y N 436 TYR CG CD2 sing Y N 437 TYR CD1 CE1 sing Y N 438 TYR CD1 HD1 sing N N 439 TYR CD2 CE2 doub Y N 440 TYR CD2 HD2 sing N N 441 TYR CE1 CZ doub Y N 442 TYR CE1 HE1 sing N N 443 TYR CE2 CZ sing Y N 444 TYR CE2 HE2 sing N N 445 TYR CZ OH sing N N 446 TYR OH HH sing N N 447 TYR OXT HXT sing N N 448 VAL N CA sing N N 449 VAL N H sing N N 450 VAL N H2 sing N N 451 VAL CA C sing N N 452 VAL CA CB sing N N 453 VAL CA HA sing N N 454 VAL C O doub N N 455 VAL C OXT sing N N 456 VAL CB CG1 sing N N 457 VAL CB CG2 sing N N 458 VAL CB HB sing N N 459 VAL CG1 HG11 sing N N 460 VAL CG1 HG12 sing N N 461 VAL CG1 HG13 sing N N 462 VAL CG2 HG21 sing N N 463 VAL CG2 HG22 sing N N 464 VAL CG2 HG23 sing N N 465 VAL OXT HXT sing N N 466 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3UFD 'double helix' 3UFD 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D DT 2 1_555 C DA 19 1_555 -0.724 -0.225 0.062 -7.484 0.211 6.335 1 D_DT2:DA19_C D 2 ? C 19 ? 20 1 1 D DG 3 1_555 C DC 18 1_555 -1.094 -0.149 -0.114 -10.114 -5.246 0.107 2 D_DG3:DC18_C D 3 ? C 18 ? 19 1 1 D DT 4 1_555 C DA 17 1_555 0.008 -0.302 -0.286 9.940 -3.022 4.856 3 D_DT4:DA17_C D 4 ? C 17 ? 20 1 1 D DC 5 1_555 C DG 16 1_555 -1.158 0.021 -0.058 6.191 -4.299 5.876 4 D_DC5:DG16_C D 5 ? C 16 ? 19 1 1 D DG 6 1_555 C DC 15 1_555 -0.101 0.003 0.282 12.331 -13.004 6.028 5 D_DG6:DC15_C D 6 ? C 15 ? 19 1 1 D DA 7 1_555 C DT 14 1_555 0.085 -0.323 0.365 12.115 -11.947 6.419 6 D_DA7:DT14_C D 7 ? C 14 ? 20 1 1 D DC 8 1_555 C DG 13 1_555 0.329 -0.067 0.090 3.949 -9.784 6.178 7 D_DC8:DG13_C D 8 ? C 13 ? 19 1 1 D DT 9 1_555 C DA 12 1_555 0.020 0.014 0.029 10.242 -16.160 7.071 8 D_DT9:DA12_C D 9 ? C 12 ? 20 1 1 D DA 10 1_555 C DT 11 1_555 0.561 -0.228 -0.054 -8.576 -1.154 6.394 9 D_DA10:DT11_C D 10 ? C 11 ? 20 1 1 D DT 11 1_555 C DA 10 1_555 -0.015 -0.272 0.073 -4.386 1.756 6.062 10 D_DT11:DA10_C D 11 ? C 10 ? 20 1 1 D DA 12 1_555 C DT 9 1_555 0.169 -0.235 0.107 -5.264 -12.617 4.652 11 D_DA12:DT9_C D 12 ? C 9 ? 20 1 1 D DG 13 1_555 C DC 8 1_555 -0.101 0.004 -0.315 -7.148 -13.322 -1.459 12 D_DG13:DC8_C D 13 ? C 8 ? 19 1 1 D DT 14 1_555 C DA 7 1_555 0.168 -0.178 0.102 -12.220 -9.321 1.875 13 D_DT14:DA7_C D 14 ? C 7 ? 20 1 1 D DC 15 1_555 C DG 6 1_555 0.121 -0.170 -0.261 -2.188 -3.627 1.448 14 D_DC15:DG6_C D 15 ? C 6 ? 19 1 1 D DT 16 1_555 C DA 5 1_555 -0.530 -0.578 0.074 0.544 -15.351 -3.593 15 D_DT16:DA5_C D 16 ? C 5 ? 20 1 1 D DA 17 1_555 C DT 4 1_555 0.700 -0.037 -0.063 -4.725 -4.386 -7.433 16 D_DA17:DT4_C D 17 ? C 4 ? 20 1 1 D DC 18 1_555 C DG 3 1_555 0.795 -0.248 -0.396 8.272 -3.465 -0.722 17 D_DC18:DG3_C D 18 ? C 3 ? 19 1 1 D DA 19 1_555 C DT 2 1_555 0.604 0.118 0.538 23.961 -2.582 -0.295 18 D_DA19:DT2_C D 19 ? C 2 ? 20 1 1 H DT 1 1_555 C DA 1 1_555 0.267 0.232 0.624 10.631 -18.379 36.260 19 H_DT1:DA1_C H 1 ? C 1 ? ? 1 1 H DT 2 1_555 G DA 19 1_555 0.162 -0.154 -0.069 -13.002 -2.272 -1.630 20 H_DT2:DA19_G H 2 ? G 19 ? 20 1 1 H DG 3 1_555 G DC 18 1_555 -0.377 -0.338 -0.141 -6.647 -4.214 0.319 21 H_DG3:DC18_G H 3 ? G 18 ? 19 1 1 H DT 4 1_555 G DA 17 1_555 -0.779 -0.237 0.004 11.628 -3.757 5.493 22 H_DT4:DA17_G H 4 ? G 17 ? 20 1 1 H DC 5 1_555 G DG 16 1_555 -1.359 -0.150 0.071 11.122 -0.303 -1.660 23 H_DC5:DG16_G H 5 ? G 16 ? 19 1 1 H DG 6 1_555 G DC 15 1_555 0.144 -0.217 0.196 9.495 -8.039 -2.946 24 H_DG6:DC15_G H 6 ? G 15 ? 19 1 1 H DA 7 1_555 G DT 14 1_555 0.246 -0.257 0.197 16.851 -16.831 3.414 25 H_DA7:DT14_G H 7 ? G 14 ? 20 1 1 H DC 8 1_555 G DG 13 1_555 -0.295 -0.082 0.181 7.466 -19.638 -1.312 26 H_DC8:DG13_G H 8 ? G 13 ? 19 1 1 H DT 9 1_555 G DA 12 1_555 0.131 -0.112 -0.046 10.684 -17.273 6.142 27 H_DT9:DA12_G H 9 ? G 12 ? 20 1 1 H DA 10 1_555 G DT 11 1_555 -0.237 -0.174 0.060 2.079 -1.355 3.385 28 H_DA10:DT11_G H 10 ? G 11 ? 20 1 1 H DT 11 1_555 G DA 10 1_555 0.021 -0.057 0.128 6.630 -2.493 7.859 29 H_DT11:DA10_G H 11 ? G 10 ? 20 1 1 H DA 12 1_555 G DT 9 1_555 0.175 -0.147 0.031 -5.813 -12.947 7.795 30 H_DA12:DT9_G H 12 ? G 9 ? 20 1 1 H DG 13 1_555 G DC 8 1_555 -0.611 -0.129 0.595 -0.925 -20.221 7.729 31 H_DG13:DC8_G H 13 ? G 8 ? 19 1 1 H DT 14 1_555 G DA 7 1_555 -0.262 -0.217 0.298 -11.398 -13.141 4.300 32 H_DT14:DA7_G H 14 ? G 7 ? 20 1 1 H DC 15 1_555 G DG 6 1_555 -0.155 -0.106 0.177 -13.869 -5.168 -1.002 33 H_DC15:DG6_G H 15 ? G 6 ? 19 1 1 H DT 16 1_555 G DA 5 1_555 -0.509 -0.281 -0.209 1.735 -11.817 -4.900 34 H_DT16:DA5_G H 16 ? G 5 ? 20 1 1 H DA 17 1_555 G DT 4 1_555 0.100 -0.141 -0.329 -2.311 -5.341 6.434 35 H_DA17:DT4_G H 17 ? G 4 ? 20 1 1 H DC 18 1_555 G DG 3 1_555 -0.035 -0.015 -0.093 8.972 -0.055 0.451 36 H_DC18:DG3_G H 18 ? G 3 ? 19 1 1 H DA 19 1_555 G DT 2 1_555 -0.613 -0.018 0.330 10.716 -11.544 -1.074 37 H_DA19:DT2_G H 19 ? G 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D DT 2 1_555 C DA 19 1_555 D DG 3 1_555 C DC 18 1_555 0.212 -0.022 3.431 1.152 4.370 38.263 -0.602 -0.172 3.413 6.638 -1.750 38.519 1 DD_DT2DG3:DC18DA19_CC D 2 ? C 19 ? D 3 ? C 18 ? 1 D DG 3 1_555 C DC 18 1_555 D DT 4 1_555 C DA 17 1_555 -0.239 -0.432 2.822 -1.168 1.132 32.846 -0.929 0.251 2.812 2.001 2.064 32.885 2 DD_DG3DT4:DA17DC18_CC D 3 ? C 18 ? D 4 ? C 17 ? 1 D DT 4 1_555 C DA 17 1_555 D DC 5 1_555 C DG 16 1_555 -0.117 -0.278 3.462 -1.671 7.303 23.603 -2.974 -0.258 3.231 17.304 3.960 24.747 3 DD_DT4DC5:DG16DA17_CC D 4 ? C 17 ? D 5 ? C 16 ? 1 D DC 5 1_555 C DG 16 1_555 D DG 6 1_555 C DC 15 1_555 0.455 0.720 3.202 -3.050 12.750 36.488 -0.500 -1.066 3.221 19.602 4.690 38.696 4 DD_DC5DG6:DC15DG16_CC D 5 ? C 16 ? D 6 ? C 15 ? 1 D DG 6 1_555 C DC 15 1_555 D DA 7 1_555 C DT 14 1_555 -0.272 -0.027 3.204 -1.215 3.414 33.398 -0.595 0.275 3.193 5.919 2.107 33.589 5 DD_DG6DA7:DT14DC15_CC D 6 ? C 15 ? D 7 ? C 14 ? 1 D DA 7 1_555 C DT 14 1_555 D DC 8 1_555 C DG 13 1_555 0.419 -0.755 3.413 0.540 1.786 38.414 -1.377 -0.566 3.381 2.713 -0.820 38.457 6 DD_DA7DC8:DG13DT14_CC D 7 ? C 14 ? D 8 ? C 13 ? 1 D DC 8 1_555 C DG 13 1_555 D DT 9 1_555 C DA 12 1_555 -0.457 -0.230 3.217 2.468 5.897 29.079 -1.646 1.391 3.064 11.569 -4.842 29.759 7 DD_DC8DT9:DA12DG13_CC D 8 ? C 13 ? D 9 ? C 12 ? 1 D DT 9 1_555 C DA 12 1_555 D DA 10 1_555 C DT 11 1_555 0.543 0.440 3.846 2.894 -5.176 49.207 0.974 -0.397 3.809 -6.190 -3.461 49.541 8 DD_DT9DA10:DT11DA12_CC D 9 ? C 12 ? D 10 ? C 11 ? 1 D DA 10 1_555 C DT 11 1_555 D DT 11 1_555 C DA 10 1_555 -0.093 -0.669 3.370 -0.642 -2.968 23.673 -0.606 0.007 3.428 -7.196 1.556 23.865 9 DD_DA10DT11:DA10DT11_CC D 10 ? C 11 ? D 11 ? C 10 ? 1 D DT 11 1_555 C DA 10 1_555 D DA 12 1_555 C DT 9 1_555 -0.549 0.680 3.425 -0.120 -9.031 47.673 1.547 0.659 3.254 -11.058 0.147 48.472 10 DD_DT11DA12:DT9DA10_CC D 11 ? C 10 ? D 12 ? C 9 ? 1 D DA 12 1_555 C DT 9 1_555 D DG 13 1_555 C DC 8 1_555 0.322 -0.469 3.366 1.774 10.335 33.066 -2.397 -0.265 3.097 17.615 -3.023 34.645 11 DD_DA12DG13:DC8DT9_CC D 12 ? C 9 ? D 13 ? C 8 ? 1 D DG 13 1_555 C DC 8 1_555 D DT 14 1_555 C DA 7 1_555 -0.436 -0.831 3.260 -1.874 4.727 35.413 -2.024 0.444 3.144 7.721 3.061 35.764 12 DD_DG13DT14:DA7DC8_CC D 13 ? C 8 ? D 14 ? C 7 ? 1 D DT 14 1_555 C DA 7 1_555 D DC 15 1_555 C DG 6 1_555 0.214 0.193 3.124 3.537 1.777 29.828 0.022 0.284 3.134 3.432 -6.834 30.084 13 DD_DT14DC15:DG6DA7_CC D 14 ? C 7 ? D 15 ? C 6 ? 1 D DC 15 1_555 C DG 6 1_555 D DT 16 1_555 C DA 5 1_555 -0.508 0.023 3.497 -2.406 15.121 25.571 -3.389 0.443 3.067 30.886 4.915 29.739 14 DD_DC15DT16:DA5DG6_CC D 15 ? C 6 ? D 16 ? C 5 ? 1 D DT 16 1_555 C DA 5 1_555 D DA 17 1_555 C DT 4 1_555 0.562 -0.320 3.552 0.683 10.664 35.211 -2.073 -0.792 3.329 17.146 -1.097 36.747 15 DD_DT16DA17:DT4DA5_CC D 16 ? C 5 ? D 17 ? C 4 ? 1 D DA 17 1_555 C DT 4 1_555 D DC 18 1_555 C DG 3 1_555 0.360 -0.374 3.038 4.631 0.283 30.549 -0.754 0.165 3.054 0.534 -8.726 30.891 16 DD_DA17DC18:DG3DT4_CC D 17 ? C 4 ? D 18 ? C 3 ? 1 D DC 18 1_555 C DG 3 1_555 D DA 19 1_555 C DT 2 1_555 0.082 0.198 3.081 -3.211 2.938 36.862 -0.060 -0.534 3.069 4.626 5.056 37.110 17 DD_DC18DA19:DT2DG3_CC D 18 ? C 3 ? D 19 ? C 2 ? 1 D DA 19 1_555 C DT 2 1_555 H DT 1 1_555 C DA 1 1_555 0.712 -0.671 3.779 0.262 -4.909 42.575 -0.348 -0.945 3.834 -6.734 -0.360 42.844 18 DH_DA19DT1:DA1DT2_CC D 19 ? C 2 ? H 1 ? C 1 ? 1 H DT 1 1_555 C DA 1 1_555 H DT 2 1_555 G DA 19 1_555 1.189 -0.233 3.853 7.815 -7.939 57.272 0.265 -0.724 3.969 -8.197 -8.069 58.255 19 HH_DT1DT2:DA19DA1_GC H 1 ? C 1 ? H 2 ? G 19 ? 1 H DT 2 1_555 G DA 19 1_555 H DG 3 1_555 G DC 18 1_555 0.222 -0.048 3.280 -0.077 5.186 37.369 -0.746 -0.354 3.245 8.047 0.120 37.714 20 HH_DT2DG3:DC18DA19_GG H 2 ? G 19 ? H 3 ? G 18 ? 1 H DG 3 1_555 G DC 18 1_555 H DT 4 1_555 G DA 17 1_555 0.225 -0.430 3.055 -4.317 -0.050 24.460 -0.986 -1.732 2.972 -0.116 10.088 24.832 21 HH_DG3DT4:DA17DC18_GG H 3 ? G 18 ? H 4 ? G 17 ? 1 H DT 4 1_555 G DA 17 1_555 H DC 5 1_555 G DG 16 1_555 -0.509 -0.722 3.316 -2.862 11.067 25.231 -4.140 0.385 2.797 23.837 6.164 27.662 22 HH_DT4DC5:DG16DA17_GG H 4 ? G 17 ? H 5 ? G 16 ? 1 H DC 5 1_555 G DG 16 1_555 H DG 6 1_555 G DC 15 1_555 0.353 0.661 3.460 -2.690 12.195 38.816 -0.519 -0.831 3.474 17.797 3.925 40.701 23 HH_DC5DG6:DC15DG16_GG H 5 ? G 16 ? H 6 ? G 15 ? 1 H DG 6 1_555 G DC 15 1_555 H DA 7 1_555 G DT 14 1_555 -0.526 0.008 3.015 0.183 1.015 33.584 -0.139 0.938 3.011 1.756 -0.316 33.599 24 HH_DG6DA7:DT14DC15_GG H 6 ? G 15 ? H 7 ? G 14 ? 1 H DA 7 1_555 G DT 14 1_555 H DC 8 1_555 G DG 13 1_555 0.408 -0.761 3.643 0.678 0.063 33.468 -1.333 -0.584 3.649 0.109 -1.177 33.475 25 HH_DA7DC8:DG13DT14_GG H 7 ? G 14 ? H 8 ? G 13 ? 1 H DC 8 1_555 G DG 13 1_555 H DT 9 1_555 G DA 12 1_555 0.152 -0.399 3.303 5.337 10.436 31.285 -2.423 0.619 3.005 18.555 -9.490 33.357 26 HH_DC8DT9:DA12DG13_GG H 8 ? G 13 ? H 9 ? G 12 ? 1 H DT 9 1_555 G DA 12 1_555 H DA 10 1_555 G DT 11 1_555 0.627 1.135 3.420 -0.063 -3.541 45.058 1.803 -0.821 3.325 -4.613 0.082 45.190 27 HH_DT9DA10:DT11DA12_GG H 9 ? G 12 ? H 10 ? G 11 ? 1 H DA 10 1_555 G DT 11 1_555 H DT 11 1_555 G DA 10 1_555 0.244 -0.305 3.557 -0.124 -6.906 30.405 0.879 -0.480 3.538 -12.958 0.233 31.161 28 HH_DA10DT11:DA10DT11_GG H 10 ? G 11 ? H 11 ? G 10 ? 1 H DT 11 1_555 G DA 10 1_555 H DA 12 1_555 G DT 9 1_555 -0.469 0.503 3.538 -0.546 -0.638 47.570 0.678 0.534 3.536 -0.791 0.677 47.577 29 HH_DT11DA12:DT9DA10_GG H 11 ? G 10 ? H 12 ? G 9 ? 1 H DA 12 1_555 G DT 9 1_555 H DG 13 1_555 G DC 8 1_555 0.602 -0.707 3.223 -6.700 3.217 28.654 -2.035 -2.533 2.915 6.366 13.258 29.582 30 HH_DA12DG13:DC8DT9_GG H 12 ? G 9 ? H 13 ? G 8 ? 1 H DG 13 1_555 G DC 8 1_555 H DT 14 1_555 G DA 7 1_555 -0.673 -1.082 3.431 2.292 2.369 36.212 -2.075 1.409 3.309 3.801 -3.679 36.356 31 HH_DG13DT14:DA7DC8_GG H 13 ? G 8 ? H 14 ? G 7 ? 1 H DT 14 1_555 G DA 7 1_555 H DC 15 1_555 G DG 6 1_555 -0.117 -0.271 3.334 0.837 2.469 31.275 -0.972 0.375 3.299 4.569 -1.549 31.381 32 HH_DT14DC15:DG6DA7_GG H 14 ? G 7 ? H 15 ? G 6 ? 1 H DC 15 1_555 G DG 6 1_555 H DT 16 1_555 G DA 5 1_555 -0.461 -0.207 3.047 2.296 13.499 27.044 -2.897 1.309 2.605 26.796 -4.558 30.255 33 HH_DC15DT16:DA5DG6_GG H 15 ? G 6 ? H 16 ? G 5 ? 1 H DT 16 1_555 G DA 5 1_555 H DA 17 1_555 G DT 4 1_555 0.933 0.198 3.544 0.065 8.966 34.945 -1.070 -1.498 3.489 14.635 -0.106 36.042 34 HH_DT16DA17:DT4DA5_GG H 16 ? G 5 ? H 17 ? G 4 ? 1 H DA 17 1_555 G DT 4 1_555 H DC 18 1_555 G DG 3 1_555 -0.036 -0.367 3.028 -0.474 3.914 27.787 -1.605 -0.028 2.949 8.099 0.980 28.060 35 HH_DA17DC18:DG3DT4_GG H 17 ? G 4 ? H 18 ? G 3 ? 1 H DC 18 1_555 G DG 3 1_555 H DA 19 1_555 G DT 2 1_555 -0.430 0.375 3.448 -2.276 2.684 36.774 0.208 0.352 3.485 4.242 3.597 36.936 36 HH_DC18DA19:DT2DG3_GG H 18 ? G 3 ? H 19 ? G 2 ? # _atom_sites.entry_id 3UFD _atom_sites.fract_transf_matrix[1][1] 0.021057 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001354 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006798 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020973 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O P S # loop_