HEADER APOPTOSIS/APOPTOSIS INHIBITOR 04-NOV-11 3UIJ TITLE CRYSTAL STRUCTURE OF HUMAN SURVIVIN K62Y/H80W MUTANT IN COMPLEX WITH TITLE 2 SMAC/DIABLO(1-15) PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-142; COMPND 5 SYNONYM: APOPTOSIS INHIBITOR 4, APOPTOSIS INHIBITOR SURVIVIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DIABLO HOMOLOG, MITOCHONDRIAL; COMPND 10 CHAIN: P, Q; COMPND 11 FRAGMENT: UNP RESIDUES 1-15; COMPND 12 SYNONYM: DIRECT IAP-BINDING PROTEIN WITH LOW PI, SECOND MITOCHONDRIA- COMPND 13 DERIVED ACTIVATOR OF CASPASE, SMAC; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BIRC5, API4, IAP4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-SUMO; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS BIR DOMAIN, MITOSIS, T3 PHOSPHORYLATED H3 BINDING, SMAC/DIABLO KEYWDS 2 BINDING, APOPTOSIS-APOPTOSIS INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.DU,D.J.PATEL REVDAT 2 13-SEP-23 3UIJ 1 SEQADV LINK REVDAT 1 01-FEB-12 3UIJ 0 JRNL AUTH J.DU,A.E.KELLY,H.FUNABIKI,D.J.PATEL JRNL TITL STRUCTURAL BASIS FOR RECOGNITION OF H3T3PH AND SMAC/DIABLO JRNL TITL 2 N-TERMINAL PEPTIDES BY HUMAN SURVIVIN. JRNL REF STRUCTURE V. 20 185 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22244766 JRNL DOI 10.1016/J.STR.2011.12.001 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 13932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 690 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.4855 - 4.6230 0.99 2719 124 0.1849 0.2066 REMARK 3 2 4.6230 - 3.6706 1.00 2643 161 0.1720 0.1966 REMARK 3 3 3.6706 - 3.2070 1.00 2655 134 0.2333 0.3024 REMARK 3 4 3.2070 - 2.9139 1.00 2663 144 0.2588 0.3315 REMARK 3 5 2.9139 - 2.7051 0.97 2562 127 0.3328 0.3932 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 70.18 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.730 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.03450 REMARK 3 B22 (A**2) : -13.95720 REMARK 3 B33 (A**2) : 3.00460 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 17.11090 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2342 REMARK 3 ANGLE : 0.728 3157 REMARK 3 CHIRALITY : 0.051 322 REMARK 3 PLANARITY : 0.003 413 REMARK 3 DIHEDRAL : 15.942 887 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 5:97) REMARK 3 ORIGIN FOR THE GROUP (A): -27.3926 -7.3894 -9.0625 REMARK 3 T TENSOR REMARK 3 T11: 0.5351 T22: 0.4987 REMARK 3 T33: 0.4230 T12: -0.0481 REMARK 3 T13: -0.0670 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 7.7419 L22: 8.8124 REMARK 3 L33: 3.8931 L12: 1.3867 REMARK 3 L13: 0.1964 L23: -1.2620 REMARK 3 S TENSOR REMARK 3 S11: -0.1446 S12: -0.0590 S13: -0.3126 REMARK 3 S21: 0.7973 S22: 0.0383 S23: -0.0590 REMARK 3 S31: 0.0607 S32: 0.0402 S33: 0.1198 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 98:140) REMARK 3 ORIGIN FOR THE GROUP (A): -29.5107 6.0184 7.6473 REMARK 3 T TENSOR REMARK 3 T11: 0.7668 T22: 0.4864 REMARK 3 T33: 0.7007 T12: -0.0033 REMARK 3 T13: 0.0577 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.4388 L22: -0.3855 REMARK 3 L33: 3.1324 L12: 0.6503 REMARK 3 L13: -1.1234 L23: -0.0153 REMARK 3 S TENSOR REMARK 3 S11: -0.0749 S12: -0.0749 S13: 0.2445 REMARK 3 S21: -0.2073 S22: -0.1027 S23: 0.2142 REMARK 3 S31: 0.7869 S32: -0.0164 S33: 0.1131 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 6:14) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6319 14.9737 -19.7040 REMARK 3 T TENSOR REMARK 3 T11: 0.9980 T22: 1.0147 REMARK 3 T33: 0.7966 T12: -0.2557 REMARK 3 T13: -0.0720 T23: -0.1783 REMARK 3 L TENSOR REMARK 3 L11: 4.2485 L22: 4.2714 REMARK 3 L33: 4.4576 L12: 3.0770 REMARK 3 L13: -3.1212 L23: -0.0933 REMARK 3 S TENSOR REMARK 3 S11: 1.0830 S12: -1.5236 S13: 1.5996 REMARK 3 S21: 2.5707 S22: -0.4128 S23: -0.1403 REMARK 3 S31: 1.6874 S32: -0.9385 S33: -0.4459 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 15:34) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5126 31.9099 -25.9894 REMARK 3 T TENSOR REMARK 3 T11: 0.9444 T22: 0.5906 REMARK 3 T33: 1.8888 T12: -0.0275 REMARK 3 T13: 0.0457 T23: -0.0716 REMARK 3 L TENSOR REMARK 3 L11: 0.9955 L22: 3.3710 REMARK 3 L33: 5.4132 L12: 1.3768 REMARK 3 L13: -1.8487 L23: -3.9740 REMARK 3 S TENSOR REMARK 3 S11: 0.0228 S12: -0.2965 S13: 3.1139 REMARK 3 S21: 1.7392 S22: 0.0436 S23: -1.6108 REMARK 3 S31: -1.6385 S32: -0.0114 S33: 0.1413 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 35:97) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5143 23.8877 -32.8223 REMARK 3 T TENSOR REMARK 3 T11: 0.4640 T22: 0.6652 REMARK 3 T33: 1.1305 T12: -0.0226 REMARK 3 T13: 0.0320 T23: 0.1947 REMARK 3 L TENSOR REMARK 3 L11: 6.2987 L22: 7.8565 REMARK 3 L33: 8.0177 L12: -0.3636 REMARK 3 L13: 1.6962 L23: -2.8488 REMARK 3 S TENSOR REMARK 3 S11: -0.2297 S12: 0.4755 S13: 1.0671 REMARK 3 S21: -0.5382 S22: 0.0100 S23: -1.4896 REMARK 3 S31: -0.4203 S32: 0.5910 S33: -0.1331 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 98:140) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2344 10.5249 -32.9435 REMARK 3 T TENSOR REMARK 3 T11: 0.8160 T22: 0.6249 REMARK 3 T33: 1.0872 T12: -0.0001 REMARK 3 T13: 0.1234 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 3.3128 L22: -1.8656 REMARK 3 L33: -0.4227 L12: 0.1941 REMARK 3 L13: -0.1485 L23: -0.6259 REMARK 3 S TENSOR REMARK 3 S11: -0.0077 S12: 0.6150 S13: 0.0226 REMARK 3 S21: -0.3659 S22: -0.0193 S23: -0.0101 REMARK 3 S31: -0.1615 S32: -0.0610 S33: -0.0557 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'P' REMARK 3 ORIGIN FOR THE GROUP (A): -33.2564 -9.9495 3.5598 REMARK 3 T TENSOR REMARK 3 T11: 1.3386 T22: 0.9366 REMARK 3 T33: 0.7099 T12: -0.0731 REMARK 3 T13: 0.0705 T23: -0.1300 REMARK 3 L TENSOR REMARK 3 L11: 9.9154 L22: 7.3381 REMARK 3 L33: 8.8303 L12: -5.2654 REMARK 3 L13: -6.6598 L23: -0.9110 REMARK 3 S TENSOR REMARK 3 S11: 1.0936 S12: 0.5012 S13: 1.0069 REMARK 3 S21: 1.3744 S22: -0.1072 S23: -1.3099 REMARK 3 S31: -0.6030 S32: -0.9256 S33: -0.6335 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'Q' REMARK 3 ORIGIN FOR THE GROUP (A): -0.6816 27.8864 -38.3345 REMARK 3 T TENSOR REMARK 3 T11: 1.8566 T22: 0.9905 REMARK 3 T33: 1.4877 T12: 0.3519 REMARK 3 T13: 0.9585 T23: 0.6839 REMARK 3 L TENSOR REMARK 3 L11: 0.8198 L22: 0.2376 REMARK 3 L33: 0.0417 L12: -0.0509 REMARK 3 L13: 0.1882 L23: -0.0072 REMARK 3 S TENSOR REMARK 3 S11: -1.0272 S12: -1.1199 S13: -1.7852 REMARK 3 S21: 0.5477 S22: 0.8035 S23: 0.0263 REMARK 3 S31: 1.4430 S32: 0.0307 S33: -0.1593 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UIJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13947 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : 0.05500 REMARK 200 FOR THE DATA SET : 23.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.51200 REMARK 200 R SYM FOR SHELL (I) : 0.51200 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1F3H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM BROMIDE, 12% PEG 3350, PH REMARK 280 7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.17900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.48250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.17900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.48250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 MET A 141 REMARK 465 ASP A 142 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 PRO B 4 REMARK 465 MET B 141 REMARK 465 ASP B 142 REMARK 465 ALA P 5 REMARK 465 GLN P 6 REMARK 465 LYS P 7 REMARK 465 SER P 8 REMARK 465 GLU P 9 REMARK 465 PRO P 10 REMARK 465 HIS P 11 REMARK 465 SER P 12 REMARK 465 LEU P 13 REMARK 465 SER P 14 REMARK 465 SER P 15 REMARK 465 ILE Q 4 REMARK 465 ALA Q 5 REMARK 465 GLN Q 6 REMARK 465 LYS Q 7 REMARK 465 SER Q 8 REMARK 465 GLU Q 9 REMARK 465 PRO Q 10 REMARK 465 HIS Q 11 REMARK 465 SER Q 12 REMARK 465 LEU Q 13 REMARK 465 SER Q 14 REMARK 465 SER Q 15 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 37 OD1 ASP B 72 2.03 REMARK 500 OD2 ASP B 53 N GLY B 66 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 28 -140.40 -111.95 REMARK 500 CYS A 33 54.64 -106.26 REMARK 500 LEU B 6 132.31 74.18 REMARK 500 PRO B 26 -146.54 -68.04 REMARK 500 PHE B 27 77.22 32.22 REMARK 500 LEU B 28 -148.57 -111.72 REMARK 500 CYS B 46 64.17 -118.33 REMARK 500 GLU B 51 76.33 -165.25 REMARK 500 PRO B 52 7.32 -61.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 341 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 57 SG REMARK 620 2 CYS A 60 SG 113.3 REMARK 620 3 HIS A 77 NE2 116.5 89.6 REMARK 620 4 CYS A 84 SG 121.6 114.1 95.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 341 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 57 SG REMARK 620 2 CYS B 60 SG 94.6 REMARK 620 3 HIS B 77 NE2 104.4 90.2 REMARK 620 4 CYS B 84 SG 118.3 127.0 116.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN P OF DIABLO HOMOLOG, REMARK 800 MITOCHONDRIAL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UIG RELATED DB: PDB REMARK 900 RELATED ID: 3UIH RELATED DB: PDB REMARK 900 RELATED ID: 3UII RELATED DB: PDB REMARK 900 RELATED ID: 3UIK RELATED DB: PDB DBREF 3UIJ A 1 142 UNP O15392 BIRC5_HUMAN 1 142 DBREF 3UIJ B 1 142 UNP O15392 BIRC5_HUMAN 1 142 DBREF 3UIJ P 1 15 UNP Q9NR28 DBLOH_HUMAN 56 70 DBREF 3UIJ Q 1 15 UNP Q9NR28 DBLOH_HUMAN 56 70 SEQADV 3UIJ GLY A 0 UNP O15392 EXPRESSION TAG SEQADV 3UIJ TYR A 62 UNP O15392 LYS 62 ENGINEERED MUTATION SEQADV 3UIJ TRP A 80 UNP O15392 HIS 80 ENGINEERED MUTATION SEQADV 3UIJ LYS A 129 UNP O15392 GLU 129 ENGINEERED MUTATION SEQADV 3UIJ GLY B 0 UNP O15392 EXPRESSION TAG SEQADV 3UIJ TYR B 62 UNP O15392 LYS 62 ENGINEERED MUTATION SEQADV 3UIJ TRP B 80 UNP O15392 HIS 80 ENGINEERED MUTATION SEQADV 3UIJ LYS B 129 UNP O15392 GLU 129 ENGINEERED MUTATION SEQRES 1 A 143 GLY MET GLY ALA PRO THR LEU PRO PRO ALA TRP GLN PRO SEQRES 2 A 143 PHE LEU LYS ASP HIS ARG ILE SER THR PHE LYS ASN TRP SEQRES 3 A 143 PRO PHE LEU GLU GLY CYS ALA CYS THR PRO GLU ARG MET SEQRES 4 A 143 ALA GLU ALA GLY PHE ILE HIS CYS PRO THR GLU ASN GLU SEQRES 5 A 143 PRO ASP LEU ALA GLN CYS PHE PHE CYS PHE TYR GLU LEU SEQRES 6 A 143 GLU GLY TRP GLU PRO ASP ASP ASP PRO ILE GLU GLU HIS SEQRES 7 A 143 LYS LYS TRP SER SER GLY CYS ALA PHE LEU SER VAL LYS SEQRES 8 A 143 LYS GLN PHE GLU GLU LEU THR LEU GLY GLU PHE LEU LYS SEQRES 9 A 143 LEU ASP ARG GLU ARG ALA LYS ASN LYS ILE ALA LYS GLU SEQRES 10 A 143 THR ASN ASN LYS LYS LYS GLU PHE GLU GLU THR ALA LYS SEQRES 11 A 143 LYS VAL ARG ARG ALA ILE GLU GLN LEU ALA ALA MET ASP SEQRES 1 B 143 GLY MET GLY ALA PRO THR LEU PRO PRO ALA TRP GLN PRO SEQRES 2 B 143 PHE LEU LYS ASP HIS ARG ILE SER THR PHE LYS ASN TRP SEQRES 3 B 143 PRO PHE LEU GLU GLY CYS ALA CYS THR PRO GLU ARG MET SEQRES 4 B 143 ALA GLU ALA GLY PHE ILE HIS CYS PRO THR GLU ASN GLU SEQRES 5 B 143 PRO ASP LEU ALA GLN CYS PHE PHE CYS PHE TYR GLU LEU SEQRES 6 B 143 GLU GLY TRP GLU PRO ASP ASP ASP PRO ILE GLU GLU HIS SEQRES 7 B 143 LYS LYS TRP SER SER GLY CYS ALA PHE LEU SER VAL LYS SEQRES 8 B 143 LYS GLN PHE GLU GLU LEU THR LEU GLY GLU PHE LEU LYS SEQRES 9 B 143 LEU ASP ARG GLU ARG ALA LYS ASN LYS ILE ALA LYS GLU SEQRES 10 B 143 THR ASN ASN LYS LYS LYS GLU PHE GLU GLU THR ALA LYS SEQRES 11 B 143 LYS VAL ARG ARG ALA ILE GLU GLN LEU ALA ALA MET ASP SEQRES 1 P 15 ALA VAL PRO ILE ALA GLN LYS SER GLU PRO HIS SER LEU SEQRES 2 P 15 SER SER SEQRES 1 Q 15 ALA VAL PRO ILE ALA GLN LYS SER GLU PRO HIS SER LEU SEQRES 2 Q 15 SER SER HET ZN A 341 1 HET ZN B 341 1 HETNAM ZN ZINC ION FORMUL 5 ZN 2(ZN 2+) FORMUL 7 HOH *15(H2 O) HELIX 1 1 PRO A 7 PHE A 13 5 7 HELIX 2 2 LEU A 14 PHE A 22 1 9 HELIX 3 3 THR A 34 ALA A 41 1 8 HELIX 4 4 ASP A 72 SER A 81 1 10 HELIX 5 5 CYS A 84 VAL A 89 1 6 HELIX 6 6 GLN A 92 LEU A 96 5 5 HELIX 7 7 THR A 97 ALA A 140 1 44 HELIX 8 8 PRO B 7 PHE B 13 5 7 HELIX 9 9 LEU B 14 PHE B 22 1 9 HELIX 10 10 THR B 34 GLU B 40 1 7 HELIX 11 11 ASP B 72 SER B 81 1 10 HELIX 12 12 ALA B 85 VAL B 89 5 5 HELIX 13 13 GLN B 92 LEU B 96 5 5 HELIX 14 14 THR B 97 ALA B 139 1 43 SHEET 1 A 4 PHE A 43 HIS A 45 0 SHEET 2 A 4 ALA A 55 CYS A 57 -1 O GLN A 56 N ILE A 44 SHEET 3 A 4 GLU A 63 GLU A 65 -1 O LEU A 64 N ALA A 55 SHEET 4 A 4 VAL P 2 PRO P 3 -1 O VAL P 2 N GLU A 65 SHEET 1 B 3 PHE B 43 HIS B 45 0 SHEET 2 B 3 ALA B 55 CYS B 57 -1 O GLN B 56 N ILE B 44 SHEET 3 B 3 GLU B 63 LEU B 64 -1 O LEU B 64 N ALA B 55 LINK SG CYS A 57 ZN ZN A 341 1555 1555 2.36 LINK SG CYS A 60 ZN ZN A 341 1555 1555 2.48 LINK NE2 HIS A 77 ZN ZN A 341 1555 1555 2.55 LINK SG CYS A 84 ZN ZN A 341 1555 1555 2.53 LINK SG CYS B 57 ZN ZN B 341 1555 1555 2.43 LINK SG CYS B 60 ZN ZN B 341 1555 1555 2.50 LINK NE2 HIS B 77 ZN ZN B 341 1555 1555 2.55 LINK SG CYS B 84 ZN ZN B 341 1555 1555 2.48 SITE 1 AC1 4 CYS A 57 CYS A 60 HIS A 77 CYS A 84 SITE 1 AC2 4 CYS B 57 CYS B 60 HIS B 77 CYS B 84 SITE 1 AC3 9 GLU A 51 TYR A 62 LEU A 64 GLU A 65 SITE 2 AC3 9 GLY A 66 TRP A 67 ASP A 71 GLU A 76 SITE 3 AC3 9 TRP A 80 CRYST1 114.358 70.965 82.348 90.00 129.16 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008744 0.000000 0.007122 0.00000 SCALE2 0.000000 0.014091 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015661 0.00000