data_3UMT # _entry.id 3UMT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3UMT pdb_00003umt 10.2210/pdb3umt/pdb RCSB RCSB068950 ? ? WWPDB D_1000068950 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3UMT _pdbx_database_status.recvd_initial_deposition_date 2011-11-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Pokkuluri, P.R.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Systematic stability engineering of single-chain antibodies' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wilton, R.' 1 ? primary 'Londer, Y.Y.' 2 ? primary 'Hanson, D.K.' 3 ? primary 'Zerbs, S.' 4 ? primary 'Dirks, A.' 5 ? primary 'Warner, C.' 6 ? primary 'Carney, J.P.' 7 ? primary 'Pokkuluri, P.R.' 8 ? primary 'Stevens, F.J.' 9 ? # _cell.entry_id 3UMT _cell.length_a 65.290 _cell.length_b 65.290 _cell.length_c 96.202 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3UMT _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'scFv heavy chain and light chain' 27448.291 1 ? ? ? ? 2 non-polymer syn '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' 207.290 1 ? ? ? ? 3 water nat water 18.015 203 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAQVQLQQSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSST AYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITC RASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTK LEIKRAAALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MAQVQLQQSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSST AYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITC RASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTK LEIKRAAALEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 GLN n 1 4 VAL n 1 5 GLN n 1 6 LEU n 1 7 GLN n 1 8 GLN n 1 9 SER n 1 10 GLY n 1 11 LEU n 1 12 GLU n 1 13 LEU n 1 14 VAL n 1 15 LYS n 1 16 PRO n 1 17 GLY n 1 18 ALA n 1 19 SER n 1 20 VAL n 1 21 LYS n 1 22 ILE n 1 23 SER n 1 24 CYS n 1 25 LYS n 1 26 THR n 1 27 SER n 1 28 GLY n 1 29 TYR n 1 30 THR n 1 31 PHE n 1 32 THR n 1 33 GLU n 1 34 TYR n 1 35 THR n 1 36 MET n 1 37 HIS n 1 38 TRP n 1 39 VAL n 1 40 LYS n 1 41 GLN n 1 42 SER n 1 43 HIS n 1 44 GLY n 1 45 LYS n 1 46 SER n 1 47 LEU n 1 48 GLU n 1 49 TRP n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 ILE n 1 54 ASN n 1 55 PRO n 1 56 ASN n 1 57 ASN n 1 58 GLY n 1 59 GLY n 1 60 THR n 1 61 SER n 1 62 TYR n 1 63 ASN n 1 64 GLN n 1 65 LYS n 1 66 PHE n 1 67 LYS n 1 68 GLY n 1 69 LYS n 1 70 ALA n 1 71 ILE n 1 72 LEU n 1 73 THR n 1 74 VAL n 1 75 ASP n 1 76 LYS n 1 77 SER n 1 78 SER n 1 79 SER n 1 80 THR n 1 81 ALA n 1 82 TYR n 1 83 LEU n 1 84 GLU n 1 85 LEU n 1 86 ARG n 1 87 SER n 1 88 LEU n 1 89 THR n 1 90 SER n 1 91 GLU n 1 92 ASP n 1 93 SER n 1 94 ALA n 1 95 VAL n 1 96 TYR n 1 97 TYR n 1 98 CYS n 1 99 ALA n 1 100 ARG n 1 101 ASP n 1 102 ASP n 1 103 ARG n 1 104 TYR n 1 105 PRO n 1 106 ALA n 1 107 TRP n 1 108 PHE n 1 109 ALA n 1 110 TYR n 1 111 TRP n 1 112 GLY n 1 113 GLN n 1 114 GLY n 1 115 THR n 1 116 THR n 1 117 VAL n 1 118 THR n 1 119 VAL n 1 120 SER n 1 121 SER n 1 122 GLY n 1 123 GLY n 1 124 GLY n 1 125 GLY n 1 126 SER n 1 127 GLY n 1 128 GLY n 1 129 GLY n 1 130 GLY n 1 131 SER n 1 132 GLY n 1 133 GLY n 1 134 GLY n 1 135 GLY n 1 136 SER n 1 137 THR n 1 138 ASP n 1 139 ILE n 1 140 GLN n 1 141 LEU n 1 142 THR n 1 143 GLN n 1 144 SER n 1 145 PRO n 1 146 SER n 1 147 SER n 1 148 LEU n 1 149 SER n 1 150 ALA n 1 151 SER n 1 152 LEU n 1 153 GLY n 1 154 GLU n 1 155 ARG n 1 156 VAL n 1 157 SER n 1 158 ILE n 1 159 THR n 1 160 CYS n 1 161 ARG n 1 162 ALA n 1 163 SER n 1 164 GLN n 1 165 ASP n 1 166 ILE n 1 167 GLY n 1 168 SER n 1 169 ASN n 1 170 LEU n 1 171 ASN n 1 172 TRP n 1 173 LEU n 1 174 GLN n 1 175 GLN n 1 176 LYS n 1 177 PRO n 1 178 ASP n 1 179 GLY n 1 180 THR n 1 181 ILE n 1 182 LYS n 1 183 ARG n 1 184 LEU n 1 185 ILE n 1 186 TYR n 1 187 ALA n 1 188 THR n 1 189 SER n 1 190 SER n 1 191 LEU n 1 192 ASP n 1 193 SER n 1 194 GLY n 1 195 VAL n 1 196 PRO n 1 197 LYS n 1 198 ARG n 1 199 PHE n 1 200 SER n 1 201 GLY n 1 202 SER n 1 203 ARG n 1 204 SER n 1 205 GLY n 1 206 SER n 1 207 ASP n 1 208 TYR n 1 209 SER n 1 210 LEU n 1 211 THR n 1 212 ILE n 1 213 SER n 1 214 SER n 1 215 LEU n 1 216 GLU n 1 217 SER n 1 218 GLU n 1 219 ASP n 1 220 PHE n 1 221 VAL n 1 222 ASP n 1 223 TYR n 1 224 TYR n 1 225 CYS n 1 226 LEU n 1 227 GLN n 1 228 TYR n 1 229 ALA n 1 230 SER n 1 231 SER n 1 232 PRO n 1 233 PRO n 1 234 THR n 1 235 PHE n 1 236 GLY n 1 237 GLY n 1 238 GLY n 1 239 THR n 1 240 LYS n 1 241 LEU n 1 242 GLU n 1 243 ILE n 1 244 LYS n 1 245 ARG n 1 246 ALA n 1 247 ALA n 1 248 ALA n 1 249 LEU n 1 250 GLU n 1 251 HIS n 1 252 HIS n 1 253 HIS n 1 254 HIS n 1 255 HIS n 1 256 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3UMT _struct_ref.pdbx_db_accession 3UMT _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAQVQLQQSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSST AYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITC RASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTK LEIKRAAALEHHHHHH ; _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3UMT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 256 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3UMT _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 256 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 256 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NHE non-polymer . '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' 'N-CYCLOHEXYLTAURINE; CHES' 'C8 H17 N O3 S' 207.290 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3UMT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 42.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.pdbx_details '1M Sodium citrate, 0.1 M CHES pH9.5 diluted by water 4:1, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2010-04-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97931 # _reflns.entry_id 3UMT _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100 _reflns.d_resolution_high 1.798 _reflns.number_obs 22608 _reflns.number_all 22646 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.040 _reflns.pdbx_netI_over_sigmaI 60 _reflns.B_iso_Wilson_estimate 22.3 _reflns.pdbx_redundancy 12 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_Rsym_value ? # _reflns_shell.d_res_high 1.798 _reflns_shell.d_res_low 1.83 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.341 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.4 _reflns_shell.pdbx_redundancy 12 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1095 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3UMT _refine.ls_number_reflns_obs 22528 _refine.ls_number_reflns_all 22608 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.914 _refine.ls_d_res_high 1.798 _refine.ls_percent_reflns_obs 99.65 _refine.ls_R_factor_obs 0.1772 _refine.ls_R_factor_R_work 0.1748 _refine.ls_R_factor_R_free 0.2232 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.12 _refine.ls_number_reflns_R_free 1153 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.1573 _refine.aniso_B[2][2] 0.1573 _refine.aniso_B[3][3] -0.3146 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.400 _refine.solvent_model_param_bsol 40.358 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.01 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'VH domain from structure 1KTR, VL domain from structure 1FGV' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.37 _refine.pdbx_overall_phase_error 19.51 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_R_factor_all ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1724 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 203 _refine_hist.number_atoms_total 1940 _refine_hist.d_res_high 1.798 _refine_hist.d_res_low 30.914 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.016 ? ? 1776 ? 'X-RAY DIFFRACTION' f_angle_d 1.627 ? ? 2406 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 16.917 ? ? 638 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.118 ? ? 267 ? 'X-RAY DIFFRACTION' f_plane_restr 0.009 ? ? 302 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.798 1.8803 2609 0.1819 100.00 0.2295 . . 161 . . . . 'X-RAY DIFFRACTION' . 1.8803 1.9794 2653 0.1833 100.00 0.2123 . . 132 . . . . 'X-RAY DIFFRACTION' . 1.9794 2.1034 2643 0.1808 100.00 0.2329 . . 144 . . . . 'X-RAY DIFFRACTION' . 2.1034 2.2658 2641 0.1729 100.00 0.2399 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.2658 2.4937 2643 0.1893 100.00 0.2310 . . 154 . . . . 'X-RAY DIFFRACTION' . 2.4937 2.8543 2675 0.1855 99.00 0.2336 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.8543 3.5953 2694 0.1715 99.00 0.2345 . . 130 . . . . 'X-RAY DIFFRACTION' . 3.5953 30.9182 2817 0.1657 99.00 0.2043 . . 154 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3UMT _struct.title 'scFv12, Anti-BclA antibody single chain variable fragment' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UMT _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'scFv, stability engineering, Anthrax, Anti-BclA antibody, Immunoglobulin fold (VH and VL domains), Antibody, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 30 ? TYR A 34 ? THR A 30 TYR A 34 5 ? 5 HELX_P HELX_P2 2 GLN A 64 ? LYS A 67 ? GLN A 64 LYS A 67 5 ? 4 HELX_P HELX_P3 3 LYS A 76 ? SER A 78 ? LYS A 76 SER A 78 5 ? 3 HELX_P HELX_P4 4 THR A 89 ? SER A 93 ? THR A 89 SER A 93 5 ? 5 HELX_P HELX_P5 5 GLU A 216 ? PHE A 220 ? GLU A 216 PHE A 220 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 24 A CYS 98 1_555 ? ? ? ? ? ? ? 2.103 ? ? disulf2 disulf ? ? A CYS 160 SG ? ? ? 1_555 A CYS 225 SG ? ? A CYS 160 A CYS 225 1_555 ? ? ? ? ? ? ? 2.018 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 104 A . ? TYR 104 A PRO 105 A ? PRO 105 A 1 9.58 2 SER 144 A . ? SER 144 A PRO 145 A ? PRO 145 A 1 -5.80 3 SER 231 A . ? SER 231 A PRO 232 A ? PRO 232 A 1 4.52 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 6 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel F 1 2 ? parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 5 ? GLN A 8 ? GLN A 5 GLN A 8 A 2 VAL A 20 ? SER A 27 ? VAL A 20 SER A 27 A 3 THR A 80 ? LEU A 85 ? THR A 80 LEU A 85 A 4 ALA A 70 ? ASP A 75 ? ALA A 70 ASP A 75 B 1 GLU A 12 ? VAL A 14 ? GLU A 12 VAL A 14 B 2 THR A 115 ? VAL A 119 ? THR A 115 VAL A 119 B 3 ALA A 94 ? ARG A 100 ? ALA A 94 ARG A 100 B 4 MET A 36 ? GLN A 41 ? MET A 36 GLN A 41 B 5 LEU A 47 ? ILE A 53 ? LEU A 47 ILE A 53 B 6 THR A 60 ? TYR A 62 ? THR A 60 TYR A 62 C 1 GLU A 12 ? VAL A 14 ? GLU A 12 VAL A 14 C 2 THR A 115 ? VAL A 119 ? THR A 115 VAL A 119 C 3 ALA A 94 ? ARG A 100 ? ALA A 94 ARG A 100 C 4 TYR A 110 ? TRP A 111 ? TYR A 110 TRP A 111 D 1 LEU A 141 ? SER A 144 ? LEU A 141 SER A 144 D 2 VAL A 156 ? ALA A 162 ? VAL A 156 ALA A 162 D 3 ASP A 207 ? ILE A 212 ? ASP A 207 ILE A 212 D 4 PHE A 199 ? SER A 204 ? PHE A 199 SER A 204 E 1 SER A 147 ? ALA A 150 ? SER A 147 ALA A 150 E 2 THR A 239 ? ILE A 243 ? THR A 239 ILE A 243 E 3 ASP A 222 ? GLN A 227 ? ASP A 222 GLN A 227 E 4 LEU A 170 ? GLN A 175 ? LEU A 170 GLN A 175 E 5 ILE A 181 ? TYR A 186 ? ILE A 181 TYR A 186 E 6 SER A 190 ? LEU A 191 ? SER A 190 LEU A 191 F 1 SER A 147 ? ALA A 150 ? SER A 147 ALA A 150 F 2 THR A 239 ? ILE A 243 ? THR A 239 ILE A 243 F 3 ASP A 222 ? GLN A 227 ? ASP A 222 GLN A 227 F 4 THR A 234 ? PHE A 235 ? THR A 234 PHE A 235 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 7 ? N GLN A 7 O LYS A 25 ? O LYS A 25 A 2 3 N ILE A 22 ? N ILE A 22 O LEU A 83 ? O LEU A 83 A 3 4 O THR A 80 ? O THR A 80 N ASP A 75 ? N ASP A 75 B 1 2 N GLU A 12 ? N GLU A 12 O THR A 118 ? O THR A 118 B 2 3 O VAL A 117 ? O VAL A 117 N ALA A 94 ? N ALA A 94 B 3 4 O ALA A 99 ? O ALA A 99 N HIS A 37 ? N HIS A 37 B 4 5 N LYS A 40 ? N LYS A 40 O GLU A 48 ? O GLU A 48 B 5 6 N GLY A 52 ? N GLY A 52 O SER A 61 ? O SER A 61 C 1 2 N GLU A 12 ? N GLU A 12 O THR A 118 ? O THR A 118 C 2 3 O VAL A 117 ? O VAL A 117 N ALA A 94 ? N ALA A 94 C 3 4 N ARG A 100 ? N ARG A 100 O TYR A 110 ? O TYR A 110 D 1 2 N SER A 144 ? N SER A 144 O THR A 159 ? O THR A 159 D 2 3 N CYS A 160 ? N CYS A 160 O TYR A 208 ? O TYR A 208 D 3 4 O THR A 211 ? O THR A 211 N SER A 200 ? N SER A 200 E 1 2 N LEU A 148 ? N LEU A 148 O GLU A 242 ? O GLU A 242 E 2 3 O THR A 239 ? O THR A 239 N TYR A 223 ? N TYR A 223 E 3 4 O TYR A 224 ? O TYR A 224 N LEU A 173 ? N LEU A 173 E 4 5 N TRP A 172 ? N TRP A 172 O LEU A 184 ? O LEU A 184 E 5 6 N TYR A 186 ? N TYR A 186 O SER A 190 ? O SER A 190 F 1 2 N LEU A 148 ? N LEU A 148 O GLU A 242 ? O GLU A 242 F 2 3 O THR A 239 ? O THR A 239 N TYR A 223 ? N TYR A 223 F 3 4 N GLN A 227 ? N GLN A 227 O THR A 234 ? O THR A 234 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NHE _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE NHE A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 GLY A 59 ? GLY A 59 . ? 1_555 ? 2 AC1 2 SER A 61 ? SER A 61 . ? 1_555 ? # _database_PDB_matrix.entry_id 3UMT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3UMT _atom_sites.fract_transf_matrix[1][1] 0.015316 _atom_sites.fract_transf_matrix[1][2] 0.008843 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017686 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010395 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 HIS 43 43 43 HIS HIS A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 TRP 49 49 49 TRP TRP A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 TYR 96 96 96 TYR TYR A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 CYS 98 98 98 CYS CYS A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 TRP 107 107 107 TRP TRP A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 TYR 110 110 110 TYR TYR A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 GLY 122 122 ? ? ? A . n A 1 123 GLY 123 123 ? ? ? A . n A 1 124 GLY 124 124 ? ? ? A . n A 1 125 GLY 125 125 ? ? ? A . n A 1 126 SER 126 126 ? ? ? A . n A 1 127 GLY 127 127 ? ? ? A . n A 1 128 GLY 128 128 ? ? ? A . n A 1 129 GLY 129 129 ? ? ? A . n A 1 130 GLY 130 130 ? ? ? A . n A 1 131 SER 131 131 ? ? ? A . n A 1 132 GLY 132 132 ? ? ? A . n A 1 133 GLY 133 133 ? ? ? A . n A 1 134 GLY 134 134 ? ? ? A . n A 1 135 GLY 135 135 ? ? ? A . n A 1 136 SER 136 136 ? ? ? A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 GLN 140 140 140 GLN GLN A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 GLN 143 143 143 GLN GLN A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 PRO 145 145 145 PRO PRO A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 SER 151 151 151 SER SER A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 CYS 160 160 160 CYS CYS A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 SER 163 163 163 SER SER A . n A 1 164 GLN 164 164 164 GLN GLN A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 ASN 169 169 169 ASN ASN A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 ASN 171 171 171 ASN ASN A . n A 1 172 TRP 172 172 172 TRP TRP A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 GLN 174 174 174 GLN GLN A . n A 1 175 GLN 175 175 175 GLN GLN A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 PRO 177 177 177 PRO PRO A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 ILE 181 181 181 ILE ILE A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 TYR 186 186 186 TYR TYR A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 SER 189 189 189 SER SER A . n A 1 190 SER 190 190 190 SER SER A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 GLY 194 194 194 GLY GLY A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 PRO 196 196 196 PRO PRO A . n A 1 197 LYS 197 197 197 LYS LYS A . n A 1 198 ARG 198 198 198 ARG ARG A . n A 1 199 PHE 199 199 199 PHE PHE A . n A 1 200 SER 200 200 200 SER SER A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 ARG 203 203 203 ARG ARG A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 SER 206 206 206 SER SER A . n A 1 207 ASP 207 207 207 ASP ASP A . n A 1 208 TYR 208 208 208 TYR TYR A . n A 1 209 SER 209 209 209 SER SER A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 SER 217 217 217 SER SER A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 PHE 220 220 220 PHE PHE A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 ASP 222 222 222 ASP ASP A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 TYR 224 224 224 TYR TYR A . n A 1 225 CYS 225 225 225 CYS CYS A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 GLN 227 227 227 GLN GLN A . n A 1 228 TYR 228 228 228 TYR TYR A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 SER 230 230 230 SER SER A . n A 1 231 SER 231 231 231 SER SER A . n A 1 232 PRO 232 232 232 PRO PRO A . n A 1 233 PRO 233 233 233 PRO PRO A . n A 1 234 THR 234 234 234 THR THR A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 GLY 238 238 238 GLY GLY A . n A 1 239 THR 239 239 239 THR THR A . n A 1 240 LYS 240 240 240 LYS LYS A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 GLU 242 242 242 GLU GLU A . n A 1 243 ILE 243 243 243 ILE ILE A . n A 1 244 LYS 244 244 244 LYS LYS A . n A 1 245 ARG 245 245 ? ? ? A . n A 1 246 ALA 246 246 ? ? ? A . n A 1 247 ALA 247 247 ? ? ? A . n A 1 248 ALA 248 248 ? ? ? A . n A 1 249 LEU 249 249 ? ? ? A . n A 1 250 GLU 250 250 ? ? ? A . n A 1 251 HIS 251 251 ? ? ? A . n A 1 252 HIS 252 252 ? ? ? A . n A 1 253 HIS 253 253 ? ? ? A . n A 1 254 HIS 254 254 ? ? ? A . n A 1 255 HIS 255 255 ? ? ? A . n A 1 256 HIS 256 256 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NHE 1 300 300 NHE NHE A . C 3 HOH 1 301 301 HOH HOH A . C 3 HOH 2 302 302 HOH HOH A . C 3 HOH 3 303 303 HOH HOH A . C 3 HOH 4 304 304 HOH HOH A . C 3 HOH 5 305 305 HOH HOH A . C 3 HOH 6 306 306 HOH HOH A . C 3 HOH 7 307 307 HOH HOH A . C 3 HOH 8 308 308 HOH HOH A . C 3 HOH 9 309 309 HOH HOH A . C 3 HOH 10 310 310 HOH HOH A . C 3 HOH 11 311 311 HOH HOH A . C 3 HOH 12 312 312 HOH HOH A . C 3 HOH 13 313 313 HOH HOH A . C 3 HOH 14 314 314 HOH HOH A . C 3 HOH 15 315 315 HOH HOH A . C 3 HOH 16 316 316 HOH HOH A . C 3 HOH 17 317 317 HOH HOH A . C 3 HOH 18 318 318 HOH HOH A . C 3 HOH 19 319 319 HOH HOH A . C 3 HOH 20 320 320 HOH HOH A . C 3 HOH 21 321 321 HOH HOH A . C 3 HOH 22 322 322 HOH HOH A . C 3 HOH 23 323 323 HOH HOH A . C 3 HOH 24 324 324 HOH HOH A . C 3 HOH 25 325 325 HOH HOH A . C 3 HOH 26 326 326 HOH HOH A . C 3 HOH 27 327 327 HOH HOH A . C 3 HOH 28 328 328 HOH HOH A . C 3 HOH 29 329 329 HOH HOH A . C 3 HOH 30 330 330 HOH HOH A . C 3 HOH 31 331 331 HOH HOH A . C 3 HOH 32 332 332 HOH HOH A . C 3 HOH 33 333 333 HOH HOH A . C 3 HOH 34 334 334 HOH HOH A . C 3 HOH 35 335 335 HOH HOH A . C 3 HOH 36 336 336 HOH HOH A . C 3 HOH 37 337 337 HOH HOH A . C 3 HOH 38 338 338 HOH HOH A . C 3 HOH 39 339 339 HOH HOH A . C 3 HOH 40 340 340 HOH HOH A . C 3 HOH 41 341 341 HOH HOH A . C 3 HOH 42 342 342 HOH HOH A . C 3 HOH 43 343 343 HOH HOH A . C 3 HOH 44 344 344 HOH HOH A . C 3 HOH 45 345 345 HOH HOH A . C 3 HOH 46 346 346 HOH HOH A . C 3 HOH 47 347 347 HOH HOH A . C 3 HOH 48 348 348 HOH HOH A . C 3 HOH 49 349 349 HOH HOH A . C 3 HOH 50 350 350 HOH HOH A . C 3 HOH 51 351 351 HOH HOH A . C 3 HOH 52 352 352 HOH HOH A . C 3 HOH 53 353 353 HOH HOH A . C 3 HOH 54 354 354 HOH HOH A . C 3 HOH 55 355 355 HOH HOH A . C 3 HOH 56 356 356 HOH HOH A . C 3 HOH 57 357 357 HOH HOH A . C 3 HOH 58 358 358 HOH HOH A . C 3 HOH 59 359 359 HOH HOH A . C 3 HOH 60 360 360 HOH HOH A . C 3 HOH 61 361 361 HOH HOH A . C 3 HOH 62 362 362 HOH HOH A . C 3 HOH 63 363 363 HOH HOH A . C 3 HOH 64 364 364 HOH HOH A . C 3 HOH 65 365 365 HOH HOH A . C 3 HOH 66 366 366 HOH HOH A . C 3 HOH 67 367 367 HOH HOH A . C 3 HOH 68 368 368 HOH HOH A . C 3 HOH 69 369 369 HOH HOH A . C 3 HOH 70 370 370 HOH HOH A . C 3 HOH 71 371 371 HOH HOH A . C 3 HOH 72 372 372 HOH HOH A . C 3 HOH 73 373 373 HOH HOH A . C 3 HOH 74 374 374 HOH HOH A . C 3 HOH 75 375 375 HOH HOH A . C 3 HOH 76 376 376 HOH HOH A . C 3 HOH 77 377 377 HOH HOH A . C 3 HOH 78 378 378 HOH HOH A . C 3 HOH 79 379 379 HOH HOH A . C 3 HOH 80 380 380 HOH HOH A . C 3 HOH 81 381 381 HOH HOH A . C 3 HOH 82 382 382 HOH HOH A . C 3 HOH 83 383 383 HOH HOH A . C 3 HOH 84 384 384 HOH HOH A . C 3 HOH 85 385 385 HOH HOH A . C 3 HOH 86 386 386 HOH HOH A . C 3 HOH 87 387 387 HOH HOH A . C 3 HOH 88 388 388 HOH HOH A . C 3 HOH 89 389 389 HOH HOH A . C 3 HOH 90 390 390 HOH HOH A . C 3 HOH 91 391 391 HOH HOH A . C 3 HOH 92 392 392 HOH HOH A . C 3 HOH 93 393 393 HOH HOH A . C 3 HOH 94 394 394 HOH HOH A . C 3 HOH 95 395 395 HOH HOH A . C 3 HOH 96 396 396 HOH HOH A . C 3 HOH 97 397 397 HOH HOH A . C 3 HOH 98 398 398 HOH HOH A . C 3 HOH 99 399 399 HOH HOH A . C 3 HOH 100 400 400 HOH HOH A . C 3 HOH 101 401 401 HOH HOH A . C 3 HOH 102 402 402 HOH HOH A . C 3 HOH 103 403 403 HOH HOH A . C 3 HOH 104 404 404 HOH HOH A . C 3 HOH 105 405 405 HOH HOH A . C 3 HOH 106 406 406 HOH HOH A . C 3 HOH 107 407 407 HOH HOH A . C 3 HOH 108 408 408 HOH HOH A . C 3 HOH 109 409 409 HOH HOH A . C 3 HOH 110 410 410 HOH HOH A . C 3 HOH 111 411 411 HOH HOH A . C 3 HOH 112 412 412 HOH HOH A . C 3 HOH 113 413 413 HOH HOH A . C 3 HOH 114 414 414 HOH HOH A . C 3 HOH 115 415 415 HOH HOH A . C 3 HOH 116 416 416 HOH HOH A . C 3 HOH 117 417 417 HOH HOH A . C 3 HOH 118 418 418 HOH HOH A . C 3 HOH 119 419 419 HOH HOH A . C 3 HOH 120 420 420 HOH HOH A . C 3 HOH 121 421 421 HOH HOH A . C 3 HOH 122 422 422 HOH HOH A . C 3 HOH 123 423 423 HOH HOH A . C 3 HOH 124 424 424 HOH HOH A . C 3 HOH 125 425 425 HOH HOH A . C 3 HOH 126 426 426 HOH HOH A . C 3 HOH 127 427 427 HOH HOH A . C 3 HOH 128 428 428 HOH HOH A . C 3 HOH 129 429 429 HOH HOH A . C 3 HOH 130 430 430 HOH HOH A . C 3 HOH 131 431 431 HOH HOH A . C 3 HOH 132 432 432 HOH HOH A . C 3 HOH 133 433 433 HOH HOH A . C 3 HOH 134 434 434 HOH HOH A . C 3 HOH 135 435 435 HOH HOH A . C 3 HOH 136 436 436 HOH HOH A . C 3 HOH 137 437 437 HOH HOH A . C 3 HOH 138 438 438 HOH HOH A . C 3 HOH 139 439 439 HOH HOH A . C 3 HOH 140 440 440 HOH HOH A . C 3 HOH 141 441 441 HOH HOH A . C 3 HOH 142 442 442 HOH HOH A . C 3 HOH 143 443 443 HOH HOH A . C 3 HOH 144 444 444 HOH HOH A . C 3 HOH 145 445 445 HOH HOH A . C 3 HOH 146 446 446 HOH HOH A . C 3 HOH 147 447 447 HOH HOH A . C 3 HOH 148 448 448 HOH HOH A . C 3 HOH 149 449 449 HOH HOH A . C 3 HOH 150 450 450 HOH HOH A . C 3 HOH 151 451 451 HOH HOH A . C 3 HOH 152 452 452 HOH HOH A . C 3 HOH 153 453 453 HOH HOH A . C 3 HOH 154 454 454 HOH HOH A . C 3 HOH 155 455 455 HOH HOH A . C 3 HOH 156 456 456 HOH HOH A . C 3 HOH 157 457 457 HOH HOH A . C 3 HOH 158 458 458 HOH HOH A . C 3 HOH 159 459 459 HOH HOH A . C 3 HOH 160 460 460 HOH HOH A . C 3 HOH 161 461 461 HOH HOH A . C 3 HOH 162 462 462 HOH HOH A . C 3 HOH 163 463 463 HOH HOH A . C 3 HOH 164 464 464 HOH HOH A . C 3 HOH 165 465 465 HOH HOH A . C 3 HOH 166 466 466 HOH HOH A . C 3 HOH 167 467 467 HOH HOH A . C 3 HOH 168 468 468 HOH HOH A . C 3 HOH 169 469 469 HOH HOH A . C 3 HOH 170 470 470 HOH HOH A . C 3 HOH 171 471 471 HOH HOH A . C 3 HOH 172 472 472 HOH HOH A . C 3 HOH 173 473 473 HOH HOH A . C 3 HOH 174 474 474 HOH HOH A . C 3 HOH 175 475 475 HOH HOH A . C 3 HOH 176 476 476 HOH HOH A . C 3 HOH 177 477 477 HOH HOH A . C 3 HOH 178 478 478 HOH HOH A . C 3 HOH 179 479 479 HOH HOH A . C 3 HOH 180 480 480 HOH HOH A . C 3 HOH 181 481 481 HOH HOH A . C 3 HOH 182 482 482 HOH HOH A . C 3 HOH 183 483 483 HOH HOH A . C 3 HOH 184 484 484 HOH HOH A . C 3 HOH 185 485 485 HOH HOH A . C 3 HOH 186 486 486 HOH HOH A . C 3 HOH 187 487 487 HOH HOH A . C 3 HOH 188 488 488 HOH HOH A . C 3 HOH 189 489 489 HOH HOH A . C 3 HOH 190 490 490 HOH HOH A . C 3 HOH 191 491 491 HOH HOH A . C 3 HOH 192 492 492 HOH HOH A . C 3 HOH 193 493 493 HOH HOH A . C 3 HOH 194 494 494 HOH HOH A . C 3 HOH 195 495 495 HOH HOH A . C 3 HOH 196 496 496 HOH HOH A . C 3 HOH 197 497 497 HOH HOH A . C 3 HOH 198 498 498 HOH HOH A . C 3 HOH 199 499 499 HOH HOH A . C 3 HOH 200 500 500 HOH HOH A . C 3 HOH 201 501 501 HOH HOH A . C 3 HOH 202 502 502 HOH HOH A . C 3 HOH 203 503 503 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 343 ? C HOH . 2 1 A HOH 352 ? C HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-11-14 2 'Structure model' 1 1 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.1_743)' ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3UMT _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'RESIDUES 3-121 CORRESPONDS TO VH DOMAIN AND RESIDUES 138-248 CORRESPOND TO THE VL DOMAIN. THE LINKER SEQUENCE IS GGGGSGGGGSGGGGST' _pdbx_entry_details.compound_details 'THE PROTEIN CRYSTALLIZED IS A SINGLE CHAIN ANTIBODY FRAGMENT' _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N A SER 214 ? ? O A HOH 452 ? ? 2.07 2 1 NH1 A ARG 161 ? ? O A HOH 481 ? ? 2.07 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 188 ? ? 79.80 -53.28 2 1 VAL A 221 ? ? -138.30 -155.60 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 3 ? CG ? A GLN 3 CG 2 1 Y 1 A GLN 3 ? CD ? A GLN 3 CD 3 1 Y 1 A GLN 3 ? OE1 ? A GLN 3 OE1 4 1 Y 1 A GLN 3 ? NE2 ? A GLN 3 NE2 5 1 Y 1 A GLN 5 ? CG ? A GLN 5 CG 6 1 Y 1 A GLN 5 ? CD ? A GLN 5 CD 7 1 Y 1 A GLN 5 ? OE1 ? A GLN 5 OE1 8 1 Y 1 A GLN 5 ? NE2 ? A GLN 5 NE2 9 1 Y 0 A GLN 7 ? CD ? A GLN 7 CD 10 1 Y 0 A GLN 7 ? OE1 ? A GLN 7 OE1 11 1 Y 0 A GLN 7 ? NE2 ? A GLN 7 NE2 12 1 Y 0 A LYS 21 ? NZ ? A LYS 21 NZ 13 1 Y 0 A LYS 25 ? CD ? A LYS 25 CD 14 1 Y 0 A LYS 25 ? CE ? A LYS 25 CE 15 1 Y 0 A LYS 25 ? NZ ? A LYS 25 NZ 16 1 Y 1 A GLU 33 ? CG ? A GLU 33 CG 17 1 Y 1 A GLU 33 ? CD ? A GLU 33 CD 18 1 Y 1 A GLU 33 ? OE1 ? A GLU 33 OE1 19 1 Y 1 A GLU 33 ? OE2 ? A GLU 33 OE2 20 1 Y 0 A LYS 65 ? NZ ? A LYS 65 NZ 21 1 Y 0 A LYS 67 ? NZ ? A LYS 67 NZ 22 1 Y 1 A ARG 103 ? CG ? A ARG 103 CG 23 1 Y 1 A ARG 103 ? CD ? A ARG 103 CD 24 1 Y 1 A ARG 103 ? NE ? A ARG 103 NE 25 1 Y 1 A ARG 103 ? CZ ? A ARG 103 CZ 26 1 Y 1 A ARG 103 ? NH1 ? A ARG 103 NH1 27 1 Y 1 A ARG 103 ? NH2 ? A ARG 103 NH2 28 1 Y 1 A THR 137 ? OG1 ? A THR 137 OG1 29 1 Y 1 A THR 137 ? CG2 ? A THR 137 CG2 30 1 Y 0 A GLN 140 ? CD ? A GLN 140 CD 31 1 Y 0 A GLN 140 ? OE1 ? A GLN 140 OE1 32 1 Y 0 A GLN 140 ? NE2 ? A GLN 140 NE2 33 1 Y 0 A LYS 176 ? CD ? A LYS 176 CD 34 1 Y 0 A LYS 176 ? CE ? A LYS 176 CE 35 1 Y 0 A LYS 176 ? NZ ? A LYS 176 NZ 36 1 Y 0 A LYS 182 ? CD ? A LYS 182 CD 37 1 Y 0 A LYS 182 ? CE ? A LYS 182 CE 38 1 Y 0 A LYS 182 ? NZ ? A LYS 182 NZ 39 1 Y 0 A LYS 197 ? CD ? A LYS 197 CD 40 1 Y 0 A LYS 197 ? CE ? A LYS 197 CE 41 1 Y 0 A LYS 197 ? NZ ? A LYS 197 NZ 42 1 Y 1 A SER 206 ? OG ? A SER 206 OG 43 1 Y 0 A GLU 216 ? CD ? A GLU 216 CD 44 1 Y 0 A GLU 216 ? OE1 ? A GLU 216 OE1 45 1 Y 0 A GLU 216 ? OE2 ? A GLU 216 OE2 46 1 Y 0 A GLU 218 ? CD ? A GLU 218 CD 47 1 Y 0 A GLU 218 ? OE1 ? A GLU 218 OE1 48 1 Y 0 A GLU 218 ? OE2 ? A GLU 218 OE2 49 1 Y 0 A LYS 240 ? CD ? A LYS 240 CD 50 1 Y 0 A LYS 240 ? CE ? A LYS 240 CE 51 1 Y 0 A LYS 240 ? NZ ? A LYS 240 NZ 52 1 Y 1 A LYS 244 ? CG ? A LYS 244 CG 53 1 Y 1 A LYS 244 ? CD ? A LYS 244 CD 54 1 Y 1 A LYS 244 ? CE ? A LYS 244 CE 55 1 Y 1 A LYS 244 ? NZ ? A LYS 244 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A GLY 122 ? A GLY 122 4 1 Y 1 A GLY 123 ? A GLY 123 5 1 Y 1 A GLY 124 ? A GLY 124 6 1 Y 1 A GLY 125 ? A GLY 125 7 1 Y 1 A SER 126 ? A SER 126 8 1 Y 1 A GLY 127 ? A GLY 127 9 1 Y 1 A GLY 128 ? A GLY 128 10 1 Y 1 A GLY 129 ? A GLY 129 11 1 Y 1 A GLY 130 ? A GLY 130 12 1 Y 1 A SER 131 ? A SER 131 13 1 Y 1 A GLY 132 ? A GLY 132 14 1 Y 1 A GLY 133 ? A GLY 133 15 1 Y 1 A GLY 134 ? A GLY 134 16 1 Y 1 A GLY 135 ? A GLY 135 17 1 Y 1 A SER 136 ? A SER 136 18 1 Y 1 A ARG 245 ? A ARG 245 19 1 Y 1 A ALA 246 ? A ALA 246 20 1 Y 1 A ALA 247 ? A ALA 247 21 1 Y 1 A ALA 248 ? A ALA 248 22 1 Y 1 A LEU 249 ? A LEU 249 23 1 Y 1 A GLU 250 ? A GLU 250 24 1 Y 1 A HIS 251 ? A HIS 251 25 1 Y 1 A HIS 252 ? A HIS 252 26 1 Y 1 A HIS 253 ? A HIS 253 27 1 Y 1 A HIS 254 ? A HIS 254 28 1 Y 1 A HIS 255 ? A HIS 255 29 1 Y 1 A HIS 256 ? A HIS 256 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NHE "C3'" C N N 250 NHE "C2'" C N N 251 NHE "C1'" C N N 252 NHE "C6'" C N N 253 NHE N N N N 254 NHE C1 C N N 255 NHE C2 C N N 256 NHE S S N N 257 NHE O1 O N N 258 NHE O2 O N N 259 NHE O3 O N N 260 NHE "C5'" C N N 261 NHE "C4'" C N N 262 NHE "H3'1" H N N 263 NHE "H3'2" H N N 264 NHE "H2'1" H N N 265 NHE "H2'2" H N N 266 NHE "HC'1" H N N 267 NHE "H6'1" H N N 268 NHE "H6'2" H N N 269 NHE HN H N N 270 NHE HC11 H N N 271 NHE HC12 H N N 272 NHE HC21 H N N 273 NHE HC22 H N N 274 NHE HO3 H N N 275 NHE "H5'1" H N N 276 NHE "H5'2" H N N 277 NHE "H4'1" H N N 278 NHE "H4'2" H N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 THR N N N N 334 THR CA C N S 335 THR C C N N 336 THR O O N N 337 THR CB C N R 338 THR OG1 O N N 339 THR CG2 C N N 340 THR OXT O N N 341 THR H H N N 342 THR H2 H N N 343 THR HA H N N 344 THR HB H N N 345 THR HG1 H N N 346 THR HG21 H N N 347 THR HG22 H N N 348 THR HG23 H N N 349 THR HXT H N N 350 TRP N N N N 351 TRP CA C N S 352 TRP C C N N 353 TRP O O N N 354 TRP CB C N N 355 TRP CG C Y N 356 TRP CD1 C Y N 357 TRP CD2 C Y N 358 TRP NE1 N Y N 359 TRP CE2 C Y N 360 TRP CE3 C Y N 361 TRP CZ2 C Y N 362 TRP CZ3 C Y N 363 TRP CH2 C Y N 364 TRP OXT O N N 365 TRP H H N N 366 TRP H2 H N N 367 TRP HA H N N 368 TRP HB2 H N N 369 TRP HB3 H N N 370 TRP HD1 H N N 371 TRP HE1 H N N 372 TRP HE3 H N N 373 TRP HZ2 H N N 374 TRP HZ3 H N N 375 TRP HH2 H N N 376 TRP HXT H N N 377 TYR N N N N 378 TYR CA C N S 379 TYR C C N N 380 TYR O O N N 381 TYR CB C N N 382 TYR CG C Y N 383 TYR CD1 C Y N 384 TYR CD2 C Y N 385 TYR CE1 C Y N 386 TYR CE2 C Y N 387 TYR CZ C Y N 388 TYR OH O N N 389 TYR OXT O N N 390 TYR H H N N 391 TYR H2 H N N 392 TYR HA H N N 393 TYR HB2 H N N 394 TYR HB3 H N N 395 TYR HD1 H N N 396 TYR HD2 H N N 397 TYR HE1 H N N 398 TYR HE2 H N N 399 TYR HH H N N 400 TYR HXT H N N 401 VAL N N N N 402 VAL CA C N S 403 VAL C C N N 404 VAL O O N N 405 VAL CB C N N 406 VAL CG1 C N N 407 VAL CG2 C N N 408 VAL OXT O N N 409 VAL H H N N 410 VAL H2 H N N 411 VAL HA H N N 412 VAL HB H N N 413 VAL HG11 H N N 414 VAL HG12 H N N 415 VAL HG13 H N N 416 VAL HG21 H N N 417 VAL HG22 H N N 418 VAL HG23 H N N 419 VAL HXT H N N 420 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NHE "C3'" "C2'" sing N N 237 NHE "C3'" "C4'" sing N N 238 NHE "C3'" "H3'1" sing N N 239 NHE "C3'" "H3'2" sing N N 240 NHE "C2'" "C1'" sing N N 241 NHE "C2'" "H2'1" sing N N 242 NHE "C2'" "H2'2" sing N N 243 NHE "C1'" "C6'" sing N N 244 NHE "C1'" N sing N N 245 NHE "C1'" "HC'1" sing N N 246 NHE "C6'" "C5'" sing N N 247 NHE "C6'" "H6'1" sing N N 248 NHE "C6'" "H6'2" sing N N 249 NHE N C1 sing N N 250 NHE N HN sing N N 251 NHE C1 C2 sing N N 252 NHE C1 HC11 sing N N 253 NHE C1 HC12 sing N N 254 NHE C2 S sing N N 255 NHE C2 HC21 sing N N 256 NHE C2 HC22 sing N N 257 NHE S O1 doub N N 258 NHE S O2 doub N N 259 NHE S O3 sing N N 260 NHE O3 HO3 sing N N 261 NHE "C5'" "C4'" sing N N 262 NHE "C5'" "H5'1" sing N N 263 NHE "C5'" "H5'2" sing N N 264 NHE "C4'" "H4'1" sing N N 265 NHE "C4'" "H4'2" sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 THR N CA sing N N 320 THR N H sing N N 321 THR N H2 sing N N 322 THR CA C sing N N 323 THR CA CB sing N N 324 THR CA HA sing N N 325 THR C O doub N N 326 THR C OXT sing N N 327 THR CB OG1 sing N N 328 THR CB CG2 sing N N 329 THR CB HB sing N N 330 THR OG1 HG1 sing N N 331 THR CG2 HG21 sing N N 332 THR CG2 HG22 sing N N 333 THR CG2 HG23 sing N N 334 THR OXT HXT sing N N 335 TRP N CA sing N N 336 TRP N H sing N N 337 TRP N H2 sing N N 338 TRP CA C sing N N 339 TRP CA CB sing N N 340 TRP CA HA sing N N 341 TRP C O doub N N 342 TRP C OXT sing N N 343 TRP CB CG sing N N 344 TRP CB HB2 sing N N 345 TRP CB HB3 sing N N 346 TRP CG CD1 doub Y N 347 TRP CG CD2 sing Y N 348 TRP CD1 NE1 sing Y N 349 TRP CD1 HD1 sing N N 350 TRP CD2 CE2 doub Y N 351 TRP CD2 CE3 sing Y N 352 TRP NE1 CE2 sing Y N 353 TRP NE1 HE1 sing N N 354 TRP CE2 CZ2 sing Y N 355 TRP CE3 CZ3 doub Y N 356 TRP CE3 HE3 sing N N 357 TRP CZ2 CH2 doub Y N 358 TRP CZ2 HZ2 sing N N 359 TRP CZ3 CH2 sing Y N 360 TRP CZ3 HZ3 sing N N 361 TRP CH2 HH2 sing N N 362 TRP OXT HXT sing N N 363 TYR N CA sing N N 364 TYR N H sing N N 365 TYR N H2 sing N N 366 TYR CA C sing N N 367 TYR CA CB sing N N 368 TYR CA HA sing N N 369 TYR C O doub N N 370 TYR C OXT sing N N 371 TYR CB CG sing N N 372 TYR CB HB2 sing N N 373 TYR CB HB3 sing N N 374 TYR CG CD1 doub Y N 375 TYR CG CD2 sing Y N 376 TYR CD1 CE1 sing Y N 377 TYR CD1 HD1 sing N N 378 TYR CD2 CE2 doub Y N 379 TYR CD2 HD2 sing N N 380 TYR CE1 CZ doub Y N 381 TYR CE1 HE1 sing N N 382 TYR CE2 CZ sing Y N 383 TYR CE2 HE2 sing N N 384 TYR CZ OH sing N N 385 TYR OH HH sing N N 386 TYR OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' NHE 3 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1KTR 'VH domain from structure 1KTR, VL domain from structure 1FGV' 2 ? 'experimental model' PDB 1FGV 'VH domain from structure 1KTR, VL domain from structure 1FGV' #