data_3UMY # _entry.id 3UMY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3UMY pdb_00003umy 10.2210/pdb3umy/pdb NDB NA1420 ? ? RCSB RCSB068955 ? ? WWPDB D_1000068955 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1U63 'THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-mRNA COMPLEX' unspecified PDB 2VPL ;THE STRUCTURE OF THE COMPLEX BETWEEN THE FIRST DOMAIN OF L1 PROTEIN FROM THERMUS THERMOPHILUS AND MRNA FROM METHANOCOCCUS JANNASCHII ; unspecified PDB 2HW8 'Structure of ribosomal protein L1-mRNA complex at 2.1 resolution' unspecified PDB 1ZHO 'The structure of a ribosomal protein L1 in complex with mRNA' unspecified PDB 1MZP 'Structure of the L1 protuberance in the ribosome' unspecified PDB 3U4M 'CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TTHL1 IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS' unspecified PDB 3U42 'MUTANT RIBOSOMAL PROTEIN L1 FROM THERMUS THERMOPHILUS WITH THREONINE 217 REPLACED BY VALINE' unspecified PDB 3U56 'Crystal structure of mutant ribosomal protein T217V TthL1 in complex with 80nt 23S RNA from Thermus thermophilus' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3UMY _pdbx_database_status.recvd_initial_deposition_date 2011-11-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gabdulkhakov, A.G.' 1 'Nevskaya, N.A.' 2 'Nikonov, S.V.' 3 # _citation.id primary _citation.title 'Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tishchenko, S.V.' 1 ? primary 'Nikonova, E.Y.' 2 ? primary 'Kostareva, O.S.' 3 ? primary 'Gabdulkhakov, A.G.' 4 ? primary 'Sarskikh, A.V.' 5 ? primary 'Piendl, W.' 6 ? primary 'Nikonov, S.V.' 7 ? primary 'Garber, M.B.' 8 ? primary 'Nevskaya, N.A.' 9 ? # _cell.entry_id 3UMY _cell.length_a 67.110 _cell.length_b 68.820 _cell.length_c 88.830 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3UMY _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '50S ribosomal protein L1' 24706.477 1 ? T217A ? ? 2 polymer man 'RNA (80-MER)' 25974.475 1 ? ? ? 'fragment of 23S rRNA' 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? 7 water nat water 18.015 186 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKG EKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGR IEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTAMGPSVRINPHS ; ;PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKG EKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGR IEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTAMGPSVRINPHS ; A ? 2 polyribonucleotide no no GGGAUGCGUAGGAUAGGUGGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACCACCCUUCCC GGGAUGCGUAGGAUAGGUGGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACCACCCUUCCC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 LYS n 1 3 HIS n 1 4 GLY n 1 5 LYS n 1 6 ARG n 1 7 TYR n 1 8 ARG n 1 9 ALA n 1 10 LEU n 1 11 LEU n 1 12 GLU n 1 13 LYS n 1 14 VAL n 1 15 ASP n 1 16 PRO n 1 17 ASN n 1 18 LYS n 1 19 ILE n 1 20 TYR n 1 21 THR n 1 22 ILE n 1 23 ASP n 1 24 GLU n 1 25 ALA n 1 26 ALA n 1 27 HIS n 1 28 LEU n 1 29 VAL n 1 30 LYS n 1 31 GLU n 1 32 LEU n 1 33 ALA n 1 34 THR n 1 35 ALA n 1 36 LYS n 1 37 PHE n 1 38 ASP n 1 39 GLU n 1 40 THR n 1 41 VAL n 1 42 GLU n 1 43 VAL n 1 44 HIS n 1 45 ALA n 1 46 LYS n 1 47 LEU n 1 48 GLY n 1 49 ILE n 1 50 ASP n 1 51 PRO n 1 52 ARG n 1 53 ARG n 1 54 SER n 1 55 ASP n 1 56 GLN n 1 57 ASN n 1 58 VAL n 1 59 ARG n 1 60 GLY n 1 61 THR n 1 62 VAL n 1 63 SER n 1 64 LEU n 1 65 PRO n 1 66 HIS n 1 67 GLY n 1 68 LEU n 1 69 GLY n 1 70 LYS n 1 71 GLN n 1 72 VAL n 1 73 ARG n 1 74 VAL n 1 75 LEU n 1 76 ALA n 1 77 ILE n 1 78 ALA n 1 79 LYS n 1 80 GLY n 1 81 GLU n 1 82 LYS n 1 83 ILE n 1 84 LYS n 1 85 GLU n 1 86 ALA n 1 87 GLU n 1 88 GLU n 1 89 ALA n 1 90 GLY n 1 91 ALA n 1 92 ASP n 1 93 TYR n 1 94 VAL n 1 95 GLY n 1 96 GLY n 1 97 GLU n 1 98 GLU n 1 99 ILE n 1 100 ILE n 1 101 GLN n 1 102 LYS n 1 103 ILE n 1 104 LEU n 1 105 ASP n 1 106 GLY n 1 107 TRP n 1 108 MET n 1 109 ASP n 1 110 PHE n 1 111 ASP n 1 112 ALA n 1 113 VAL n 1 114 VAL n 1 115 ALA n 1 116 THR n 1 117 PRO n 1 118 ASP n 1 119 VAL n 1 120 MET n 1 121 GLY n 1 122 ALA n 1 123 VAL n 1 124 GLY n 1 125 SER n 1 126 LYS n 1 127 LEU n 1 128 GLY n 1 129 ARG n 1 130 ILE n 1 131 LEU n 1 132 GLY n 1 133 PRO n 1 134 ARG n 1 135 GLY n 1 136 LEU n 1 137 LEU n 1 138 PRO n 1 139 ASN n 1 140 PRO n 1 141 LYS n 1 142 ALA n 1 143 GLY n 1 144 THR n 1 145 VAL n 1 146 GLY n 1 147 PHE n 1 148 ASN n 1 149 ILE n 1 150 GLY n 1 151 GLU n 1 152 ILE n 1 153 ILE n 1 154 ARG n 1 155 GLU n 1 156 ILE n 1 157 LYS n 1 158 ALA n 1 159 GLY n 1 160 ARG n 1 161 ILE n 1 162 GLU n 1 163 PHE n 1 164 ARG n 1 165 ASN n 1 166 ASP n 1 167 LYS n 1 168 THR n 1 169 GLY n 1 170 ALA n 1 171 ILE n 1 172 HIS n 1 173 ALA n 1 174 PRO n 1 175 VAL n 1 176 GLY n 1 177 LYS n 1 178 ALA n 1 179 SER n 1 180 PHE n 1 181 PRO n 1 182 PRO n 1 183 GLU n 1 184 LYS n 1 185 LEU n 1 186 ALA n 1 187 ASP n 1 188 ASN n 1 189 ILE n 1 190 ARG n 1 191 ALA n 1 192 PHE n 1 193 ILE n 1 194 ARG n 1 195 ALA n 1 196 LEU n 1 197 GLU n 1 198 ALA n 1 199 HIS n 1 200 LYS n 1 201 PRO n 1 202 GLU n 1 203 GLY n 1 204 ALA n 1 205 LYS n 1 206 GLY n 1 207 THR n 1 208 PHE n 1 209 LEU n 1 210 ARG n 1 211 SER n 1 212 VAL n 1 213 TYR n 1 214 VAL n 1 215 THR n 1 216 THR n 1 217 ALA n 1 218 MET n 1 219 GLY n 1 220 PRO n 1 221 SER n 1 222 VAL n 1 223 ARG n 1 224 ILE n 1 225 ASN n 1 226 PRO n 1 227 HIS n 1 228 SER n 2 1 G n 2 2 G n 2 3 G n 2 4 A n 2 5 U n 2 6 G n 2 7 C n 2 8 G n 2 9 U n 2 10 A n 2 11 G n 2 12 G n 2 13 A n 2 14 U n 2 15 A n 2 16 G n 2 17 G n 2 18 U n 2 19 G n 2 20 G n 2 21 G n 2 22 A n 2 23 G n 2 24 C n 2 25 C n 2 26 U n 2 27 G n 2 28 U n 2 29 G n 2 30 A n 2 31 A n 2 32 C n 2 33 C n 2 34 C n 2 35 C n 2 36 C n 2 37 G n 2 38 C n 2 39 C n 2 40 U n 2 41 C n 2 42 C n 2 43 G n 2 44 G n 2 45 G n 2 46 U n 2 47 G n 2 48 G n 2 49 G n 2 50 G n 2 51 G n 2 52 G n 2 53 G n 2 54 A n 2 55 G n 2 56 G n 2 57 C n 2 58 G n 2 59 C n 2 60 C n 2 61 G n 2 62 G n 2 63 U n 2 64 G n 2 65 A n 2 66 A n 2 67 A n 2 68 U n 2 69 A n 2 70 C n 2 71 C n 2 72 A n 2 73 C n 2 74 C n 2 75 C n 2 76 U n 2 77 U n 2 78 C n 2 79 C n 2 80 C n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? 'rplA, rpl1' ? ? ? ? ? ? 'Thermus thermophilus' 274 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL11(DE3)' ? ? ? ? ? ? ? Plasmid ? ? ? 'pET11a-PL/TthL1 T217A' ? ? 2 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Thermus thermophilus' 274 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL11(DE3)' ? ? ? ? ? ? ? Plasmid ? ? ? pUC18/rRNATth ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RL1_THETH P27150 1 ;PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKG EKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGR IEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS ; 2 ? 2 PDB 3UMY 3UMY 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3UMY A 1 ? 228 ? P27150 2 ? 229 ? 1 228 2 2 3UMY B 1 ? 80 ? 3UMY 2105 ? 2184 ? 2105 2184 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3UMY _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 217 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P27150 _struct_ref_seq_dif.db_mon_id THR _struct_ref_seq_dif.pdbx_seq_db_seq_num 218 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 217 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3UMY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_percent_sol 39.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2.0 M Ammonium sulfate, 0.1 M Bis-Tris, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2011-04-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'MONTEL 200' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'BRUKER AXS MICROSTAR' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3UMY _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 27.200 _reflns.d_resolution_high 1.900 _reflns.number_obs 32762 _reflns.number_all ? _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.9900 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.540 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.00 _reflns_shell.percent_possible_all 98.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.730 _reflns_shell.pdbx_redundancy 3.51 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3UMY _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 32743 _refine.ls_number_reflns_all 32762 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.040 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.20 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 98.9 _refine.ls_R_factor_obs 0.199 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.196 _refine.ls_R_factor_R_free 0.246 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1638 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.03490 _refine.aniso_B[2][2] -1.96920 _refine.aniso_B[3][3] 1.93430 _refine.aniso_B[1][2] -0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.47 _refine.solvent_model_param_bsol 33.26 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3U4M' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.510 _refine.pdbx_overall_phase_error 22.450 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1740 _refine_hist.pdbx_number_atoms_nucleic_acid 1723 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 186 _refine_hist.number_atoms_total 3681 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 27.20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 3729 'X-RAY DIFFRACTION' ? f_angle_d 1.139 ? ? 5443 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.392 ? ? 1641 'X-RAY DIFFRACTION' ? f_chiral_restr 0.070 ? ? 667 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 396 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.9000 1.9559 2546 0.2746 98.00 0.3239 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.9559 2.0190 2544 0.2683 99.00 0.3223 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.0190 2.0912 2532 0.2481 98.00 0.3487 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.0912 2.1749 2546 0.2352 99.00 0.2917 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.1749 2.2738 2581 0.2221 99.00 0.2830 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.2738 2.3936 2584 0.2237 99.00 0.3021 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.3936 2.5435 2566 0.2232 99.00 0.2686 . . 135 . . . . 'X-RAY DIFFRACTION' . 2.5435 2.7397 2609 0.2121 100.00 0.2868 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.7397 3.0151 2626 0.2043 100.00 0.2605 . . 138 . . . . 'X-RAY DIFFRACTION' . 3.0151 3.4506 2623 0.1719 100.00 0.2145 . . 138 . . . . 'X-RAY DIFFRACTION' . 3.4506 4.3446 2643 0.1405 99.00 0.1710 . . 139 . . . . 'X-RAY DIFFRACTION' . 4.3446 27.2021 2705 0.1642 97.00 0.1923 . . 143 . . . . # _struct.entry_id 3UMY _struct.title 'Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UMY _struct_keywords.pdbx_keywords 'rRNA BINDING protein/RNA' _struct_keywords.text 'Rossmann Fold, RIBOSOMAL PROTEIN, rRNA, rRNA BINDING, RIBOSOME, rRNA BINDING protein-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 7 ? P N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 4 ? GLU A 12 ? GLY A 4 GLU A 12 1 ? 9 HELX_P HELX_P2 2 THR A 21 ? VAL A 29 ? THR A 21 VAL A 29 1 ? 9 HELX_P HELX_P3 3 LYS A 30 ? ALA A 33 ? LYS A 30 ALA A 33 5 ? 4 HELX_P HELX_P4 4 ARG A 53 ? ASN A 57 ? ARG A 53 ASN A 57 5 ? 5 HELX_P HELX_P5 5 GLU A 81 ? ALA A 89 ? GLU A 81 ALA A 89 1 ? 9 HELX_P HELX_P6 6 ILE A 99 ? ASP A 105 ? ILE A 99 ASP A 105 1 ? 7 HELX_P HELX_P7 7 VAL A 119 ? GLY A 132 ? VAL A 119 GLY A 132 1 ? 14 HELX_P HELX_P8 8 ASN A 148 ? ALA A 158 ? ASN A 148 ALA A 158 1 ? 11 HELX_P HELX_P9 9 PRO A 181 ? HIS A 199 ? PRO A 181 HIS A 199 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 42 OE2 ? ? ? 1_555 F NA . NA ? ? A GLU 42 A NA 304 1_555 ? ? ? ? ? ? ? 2.730 ? ? metalc2 metalc ? ? A THR 216 O ? ? ? 1_555 F NA . NA ? ? A THR 216 A NA 304 1_555 ? ? ? ? ? ? ? 2.677 ? ? metalc3 metalc ? ? F NA . NA ? ? ? 1_555 B C 71 O2 ? ? A NA 304 B C 2175 1_555 ? ? ? ? ? ? ? 2.806 ? ? metalc4 metalc ? ? F NA . NA ? ? ? 1_555 B C 71 "O2'" ? ? A NA 304 B C 2175 1_555 ? ? ? ? ? ? ? 2.956 ? ? metalc5 metalc ? ? F NA . NA ? ? ? 1_555 B A 72 "O4'" ? ? A NA 304 B A 2176 1_555 ? ? ? ? ? ? ? 3.088 ? ? metalc6 metalc ? ? B U 18 O4 ? ? ? 1_555 G MG . MG ? ? B U 2122 B MG 2201 1_555 ? ? ? ? ? ? ? 2.592 ? ? metalc7 metalc ? ? B G 19 O6 ? ? ? 1_555 G MG . MG ? ? B G 2123 B MG 2201 1_555 ? ? ? ? ? ? ? 2.569 ? ? metalc8 metalc ? ? B G 21 O6 ? ? ? 1_555 J MG . MG ? ? B G 2125 B MG 2204 1_555 ? ? ? ? ? ? ? 2.845 ? ? metalc9 metalc ? ? B C 24 O2 ? ? ? 1_555 H MG . MG ? ? B C 2128 B MG 2202 1_555 ? ? ? ? ? ? ? 2.720 ? ? metalc10 metalc ? ? B C 24 "O2'" ? ? ? 1_555 H MG . MG ? ? B C 2128 B MG 2202 1_555 ? ? ? ? ? ? ? 2.837 ? ? metalc11 metalc ? ? B G 51 OP2 ? ? ? 1_555 I MG . MG ? ? B G 2155 B MG 2203 1_555 ? ? ? ? ? ? ? 2.790 ? ? metalc12 metalc ? ? B G 53 O6 ? ? ? 1_555 I MG . MG ? ? B G 2157 B MG 2203 1_555 ? ? ? ? ? ? ? 2.980 ? ? metalc13 metalc ? ? B A 69 "O2'" ? ? ? 1_555 H MG . MG ? ? B A 2173 B MG 2202 1_555 ? ? ? ? ? ? ? 2.743 ? ? metalc14 metalc ? ? G MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2201 B HOH 2320 1_555 ? ? ? ? ? ? ? 2.535 ? ? metalc15 metalc ? ? G MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2201 B HOH 2323 1_555 ? ? ? ? ? ? ? 2.714 ? ? metalc16 metalc ? ? G MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2201 B HOH 2324 1_555 ? ? ? ? ? ? ? 2.680 ? ? metalc17 metalc ? ? G MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2201 B HOH 2328 1_555 ? ? ? ? ? ? ? 2.638 ? ? metalc18 metalc ? ? H MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2202 B HOH 2327 1_555 ? ? ? ? ? ? ? 2.784 ? ? metalc19 metalc ? ? I MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2203 B HOH 2353 1_555 ? ? ? ? ? ? ? 2.806 ? ? metalc20 metalc ? ? I MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2203 B HOH 2357 1_555 ? ? ? ? ? ? ? 2.727 ? ? metalc21 metalc ? ? J MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2204 B HOH 2371 1_555 ? ? ? ? ? ? ? 2.806 ? ? metalc22 metalc ? ? J MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2204 B HOH 2374 1_555 ? ? ? ? ? ? ? 2.814 ? ? metalc23 metalc ? ? J MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 2204 B HOH 2375 1_555 ? ? ? ? ? ? ? 2.678 ? ? hydrog1 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 80 N3 ? ? B G 2105 B C 2184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 80 O2 ? ? B G 2105 B C 2184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 80 N4 ? ? B G 2105 B C 2184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 79 N3 ? ? B G 2106 B C 2183 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 79 O2 ? ? B G 2106 B C 2183 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 79 N4 ? ? B G 2106 B C 2183 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B G 3 N1 ? ? ? 1_555 B C 78 N3 ? ? B G 2107 B C 2182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 78 O2 ? ? B G 2107 B C 2182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B G 3 O6 ? ? ? 1_555 B C 78 N4 ? ? B G 2107 B C 2182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B A 4 N1 ? ? ? 1_555 B U 77 N3 ? ? B A 2108 B U 2181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B A 4 N6 ? ? ? 1_555 B U 77 O4 ? ? B A 2108 B U 2181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B U 5 N3 ? ? ? 1_555 B U 76 O4 ? ? B U 2109 B U 2180 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog13 hydrog ? ? B U 5 O2 ? ? ? 1_555 B U 76 N3 ? ? B U 2109 B U 2180 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog14 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 75 N3 ? ? B G 2110 B C 2179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 75 O2 ? ? B G 2110 B C 2179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 75 N4 ? ? B G 2110 B C 2179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C 7 N4 ? ? ? 1_555 B G 43 O6 ? ? B C 2111 B G 2147 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog18 hydrog ? ? B G 8 O6 ? ? ? 1_555 B A 65 N6 ? ? B G 2112 B A 2169 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog19 hydrog ? ? B U 9 O4 ? ? ? 1_555 B A 66 N6 ? ? B U 2113 B A 2170 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog20 hydrog ? ? B A 10 N1 ? ? ? 1_555 B A 15 N6 ? ? B A 2114 B A 2119 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog21 hydrog ? ? B A 10 N6 ? ? ? 1_555 B A 15 N7 ? ? B A 2114 B A 2119 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog22 hydrog ? ? B G 11 N2 ? ? ? 1_555 B A 67 N1 ? ? B G 2115 B A 2171 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog23 hydrog ? ? B G 11 N3 ? ? ? 1_555 B A 67 N6 ? ? B G 2115 B A 2171 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog24 hydrog ? ? B G 12 N7 ? ? ? 1_555 B G 62 N2 ? ? B G 2116 B G 2166 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog25 hydrog ? ? B A 13 N1 ? ? ? 1_555 B U 68 N3 ? ? B A 2117 B U 2172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B A 13 N6 ? ? ? 1_555 B U 68 O4 ? ? B A 2117 B U 2172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B U 14 O4 ? ? ? 1_555 B G 44 N2 ? ? B U 2118 B G 2148 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog28 hydrog ? ? B A 15 N1 ? ? ? 1_555 B G 64 N2 ? ? B A 2119 B G 2168 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog29 hydrog ? ? B A 15 N6 ? ? ? 1_555 B G 64 N3 ? ? B A 2119 B G 2168 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog30 hydrog ? ? B G 16 N1 ? ? ? 1_555 B C 74 N3 ? ? B G 2120 B C 2178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B G 16 N2 ? ? ? 1_555 B C 74 O2 ? ? B G 2120 B C 2178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B G 16 O6 ? ? ? 1_555 B C 74 N4 ? ? B G 2120 B C 2178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 73 N3 ? ? B G 2121 B C 2177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 73 O2 ? ? B G 2121 B C 2177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 73 N4 ? ? B G 2121 B C 2177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B U 18 N3 ? ? ? 1_555 B A 72 N1 ? ? B U 2122 B A 2176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B U 18 O4 ? ? ? 1_555 B A 72 N6 ? ? B U 2122 B A 2176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B G 19 N1 ? ? ? 1_555 B C 71 N3 ? ? B G 2123 B C 2175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B G 19 N2 ? ? ? 1_555 B C 71 O2 ? ? B G 2123 B C 2175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B G 19 O6 ? ? ? 1_555 B C 71 N4 ? ? B G 2123 B C 2175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B G 20 N1 ? ? ? 1_555 B C 70 N3 ? ? B G 2124 B C 2174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B G 20 N2 ? ? ? 1_555 B C 70 O2 ? ? B G 2124 B C 2174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B G 20 O6 ? ? ? 1_555 B C 70 N4 ? ? B G 2124 B C 2174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B G 21 N2 ? ? ? 1_555 B A 69 N7 ? ? B G 2125 B A 2173 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog45 hydrog ? ? B G 21 N3 ? ? ? 1_555 B A 69 N6 ? ? B G 2125 B A 2173 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog46 hydrog ? ? B A 22 N3 ? ? ? 1_555 B G 58 N2 ? ? B A 2126 B G 2162 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog47 hydrog ? ? B G 23 N1 ? ? ? 1_555 B C 57 N3 ? ? B G 2127 B C 2161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B G 23 N2 ? ? ? 1_555 B C 57 O2 ? ? B G 2127 B C 2161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B G 23 O6 ? ? ? 1_555 B C 57 N4 ? ? B G 2127 B C 2161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B G 23 N2 ? ? ? 1_555 B A 69 N3 ? ? B G 2127 B A 2173 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog51 hydrog ? ? B C 24 N3 ? ? ? 1_555 B G 56 N1 ? ? B C 2128 B G 2160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B C 24 N4 ? ? ? 1_555 B G 56 O6 ? ? B C 2128 B G 2160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B C 24 O2 ? ? ? 1_555 B G 56 N2 ? ? B C 2128 B G 2160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B C 25 N3 ? ? ? 1_555 B G 55 N1 ? ? B C 2129 B G 2159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B C 25 N4 ? ? ? 1_555 B G 55 O6 ? ? B C 2129 B G 2159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B C 25 O2 ? ? ? 1_555 B G 55 N2 ? ? B C 2129 B G 2159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B G 29 N2 ? ? ? 1_555 B A 54 N7 ? ? B G 2133 B A 2158 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog58 hydrog ? ? B G 29 N3 ? ? ? 1_555 B A 54 N6 ? ? B G 2133 B A 2158 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog59 hydrog ? ? B A 30 N6 ? ? ? 1_555 B G 53 N3 ? ? B A 2134 B G 2157 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog60 hydrog ? ? B A 30 N7 ? ? ? 1_555 B G 53 N2 ? ? B A 2134 B G 2157 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog61 hydrog ? ? B A 31 N6 ? ? ? 1_555 B G 52 N3 ? ? B A 2135 B G 2156 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog62 hydrog ? ? B A 31 N7 ? ? ? 1_555 B G 52 N2 ? ? B A 2135 B G 2156 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog63 hydrog ? ? B C 32 N3 ? ? ? 1_555 B G 51 N1 ? ? B C 2136 B G 2155 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B C 32 N4 ? ? ? 1_555 B G 51 O6 ? ? B C 2136 B G 2155 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B C 32 O2 ? ? ? 1_555 B G 51 N2 ? ? B C 2136 B G 2155 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B C 33 N3 ? ? ? 1_555 B G 50 N1 ? ? B C 2137 B G 2154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B C 33 N4 ? ? ? 1_555 B G 50 O6 ? ? B C 2137 B G 2154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B C 33 O2 ? ? ? 1_555 B G 50 N2 ? ? B C 2137 B G 2154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B C 34 N3 ? ? ? 1_555 B G 49 N1 ? ? B C 2138 B G 2153 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B C 34 N4 ? ? ? 1_555 B G 49 O6 ? ? B C 2138 B G 2153 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B C 34 O2 ? ? ? 1_555 B G 49 N2 ? ? B C 2138 B G 2153 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B C 35 N3 ? ? ? 1_555 B G 48 N1 ? ? B C 2139 B G 2152 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B C 35 N4 ? ? ? 1_555 B G 48 O6 ? ? B C 2139 B G 2152 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B C 35 O2 ? ? ? 1_555 B G 48 N2 ? ? B C 2139 B G 2152 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B C 36 N3 ? ? ? 1_555 B G 47 N1 ? ? B C 2140 B G 2151 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B C 36 N4 ? ? ? 1_555 B G 47 O6 ? ? B C 2140 B G 2151 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B C 36 O2 ? ? ? 1_555 B G 47 N2 ? ? B C 2140 B G 2151 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B G 37 N1 ? ? ? 1_555 B U 46 O2 ? ? B G 2141 B U 2150 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog79 hydrog ? ? B G 37 O6 ? ? ? 1_555 B U 46 N3 ? ? B G 2141 B U 2150 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog80 hydrog ? ? B C 38 N3 ? ? ? 1_555 B G 45 N1 ? ? B C 2142 B G 2149 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B C 38 N4 ? ? ? 1_555 B G 45 O6 ? ? B C 2142 B G 2149 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B C 38 O2 ? ? ? 1_555 B G 45 N2 ? ? B C 2142 B G 2149 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B C 39 N3 ? ? ? 1_555 B G 44 N1 ? ? B C 2143 B G 2148 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B C 39 N4 ? ? ? 1_555 B G 44 O6 ? ? B C 2143 B G 2148 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B C 39 O2 ? ? ? 1_555 B G 44 N2 ? ? B C 2143 B G 2148 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B U 40 O2 ? ? ? 1_555 B G 43 N1 ? ? B U 2144 B G 2147 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog87 hydrog ? ? B G 62 N1 ? ? ? 1_555 B U 68 O4 ? ? B G 2166 B U 2172 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog88 hydrog ? ? B U 63 N3 ? ? ? 1_555 B A 67 N7 ? ? B U 2167 B A 2171 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog89 hydrog ? ? B U 63 O2 ? ? ? 1_555 B A 67 N6 ? ? B U 2167 B A 2171 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 170 ? LYS A 177 ? ALA A 170 LYS A 177 A 2 THR A 40 ? LEU A 47 ? THR A 40 LEU A 47 A 3 LEU A 209 ? THR A 216 ? LEU A 209 THR A 216 A 4 SER A 221 ? ARG A 223 ? SER A 221 ARG A 223 B 1 ARG A 59 ? SER A 63 ? ARG A 59 SER A 63 B 2 ARG A 160 ? ARG A 164 ? ARG A 160 ARG A 164 C 1 TYR A 93 ? GLY A 95 ? TYR A 93 GLY A 95 C 2 VAL A 74 ? ILE A 77 ? VAL A 74 ILE A 77 C 3 ALA A 112 ? ALA A 115 ? ALA A 112 ALA A 115 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 176 ? O GLY A 176 N VAL A 41 ? N VAL A 41 A 2 3 N GLU A 42 ? N GLU A 42 O THR A 215 ? O THR A 215 A 3 4 N VAL A 214 ? N VAL A 214 O VAL A 222 ? O VAL A 222 B 1 2 N VAL A 62 ? N VAL A 62 O ILE A 161 ? O ILE A 161 C 1 2 O TYR A 93 ? O TYR A 93 N ALA A 76 ? N ALA A 76 C 2 3 N LEU A 75 ? N LEU A 75 O ALA A 112 ? O ALA A 112 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 301 ? 5 'BINDING SITE FOR RESIDUE CL A 301' AC2 Software A CL 302 ? 1 'BINDING SITE FOR RESIDUE CL A 302' AC3 Software A SO4 303 ? 7 'BINDING SITE FOR RESIDUE SO4 A 303' AC4 Software A NA 304 ? 7 'BINDING SITE FOR RESIDUE NA A 304' AC5 Software B MG 2201 ? 6 'BINDING SITE FOR RESIDUE MG B 2201' AC6 Software B MG 2202 ? 5 'BINDING SITE FOR RESIDUE MG B 2202' AC7 Software B MG 2203 ? 5 'BINDING SITE FOR RESIDUE MG B 2203' AC8 Software B MG 2204 ? 4 'BINDING SITE FOR RESIDUE MG B 2204' AC9 Software B SO4 2205 ? 4 'BINDING SITE FOR RESIDUE SO4 B 2205' BC1 Software B SO4 2206 ? 3 'BINDING SITE FOR RESIDUE SO4 B 2206' BC2 Software B SO4 2207 ? 5 'BINDING SITE FOR RESIDUE SO4 B 2207' BC3 Software B SO4 2208 ? 2 'BINDING SITE FOR RESIDUE SO4 B 2208' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 211 ? SER A 211 . ? 1_555 ? 2 AC1 5 VAL A 212 ? VAL A 212 . ? 1_555 ? 3 AC1 5 ARG A 223 ? ARG A 223 . ? 1_555 ? 4 AC1 5 ILE A 224 ? ILE A 224 . ? 1_555 ? 5 AC1 5 HOH O . ? HOH A 441 . ? 1_555 ? 6 AC2 1 PHE A 147 ? PHE A 147 . ? 1_555 ? 7 AC3 7 PRO A 1 ? PRO A 1 . ? 4_445 ? 8 AC3 7 LYS A 2 ? LYS A 2 . ? 4_445 ? 9 AC3 7 HIS A 3 ? HIS A 3 . ? 4_445 ? 10 AC3 7 ARG A 52 ? ARG A 52 . ? 1_555 ? 11 AC3 7 ARG A 53 ? ARG A 53 . ? 1_555 ? 12 AC3 7 SER A 54 ? SER A 54 . ? 1_555 ? 13 AC3 7 HOH O . ? HOH A 440 . ? 1_555 ? 14 AC4 7 GLU A 42 ? GLU A 42 . ? 1_555 ? 15 AC4 7 THR A 215 ? THR A 215 . ? 1_555 ? 16 AC4 7 THR A 216 ? THR A 216 . ? 1_555 ? 17 AC4 7 ALA A 217 ? ALA A 217 . ? 1_555 ? 18 AC4 7 G B 19 ? G B 2123 . ? 1_555 ? 19 AC4 7 C B 71 ? C B 2175 . ? 1_555 ? 20 AC4 7 A B 72 ? A B 2176 . ? 1_555 ? 21 AC5 6 U B 18 ? U B 2122 . ? 1_555 ? 22 AC5 6 G B 19 ? G B 2123 . ? 1_555 ? 23 AC5 6 HOH P . ? HOH B 2320 . ? 1_555 ? 24 AC5 6 HOH P . ? HOH B 2323 . ? 1_555 ? 25 AC5 6 HOH P . ? HOH B 2324 . ? 1_555 ? 26 AC5 6 HOH P . ? HOH B 2328 . ? 1_555 ? 27 AC6 5 C B 24 ? C B 2128 . ? 1_555 ? 28 AC6 5 C B 25 ? C B 2129 . ? 1_555 ? 29 AC6 5 A B 69 ? A B 2173 . ? 1_555 ? 30 AC6 5 C B 70 ? C B 2174 . ? 1_555 ? 31 AC6 5 HOH P . ? HOH B 2327 . ? 1_555 ? 32 AC7 5 G B 51 ? G B 2155 . ? 1_555 ? 33 AC7 5 G B 52 ? G B 2156 . ? 1_555 ? 34 AC7 5 G B 53 ? G B 2157 . ? 1_555 ? 35 AC7 5 HOH P . ? HOH B 2353 . ? 1_555 ? 36 AC7 5 HOH P . ? HOH B 2357 . ? 1_555 ? 37 AC8 4 G B 21 ? G B 2125 . ? 1_555 ? 38 AC8 4 HOH P . ? HOH B 2371 . ? 1_555 ? 39 AC8 4 HOH P . ? HOH B 2374 . ? 1_555 ? 40 AC8 4 HOH P . ? HOH B 2375 . ? 1_555 ? 41 AC9 4 LYS A 184 ? LYS A 184 . ? 2_545 ? 42 AC9 4 G B 52 ? G B 2156 . ? 1_555 ? 43 AC9 4 HOH P . ? HOH B 2381 . ? 1_555 ? 44 AC9 4 HOH P . ? HOH B 2383 . ? 1_555 ? 45 BC1 3 C B 74 ? C B 2178 . ? 1_555 ? 46 BC1 3 HOH P . ? HOH B 2346 . ? 1_555 ? 47 BC1 3 HOH P . ? HOH B 2393 . ? 1_555 ? 48 BC2 5 C B 35 ? C B 2139 . ? 1_555 ? 49 BC2 5 C B 36 ? C B 2140 . ? 1_555 ? 50 BC2 5 U B 46 ? U B 2150 . ? 1_555 ? 51 BC2 5 G B 47 ? G B 2151 . ? 1_555 ? 52 BC2 5 HOH P . ? HOH B 2388 . ? 1_555 ? 53 BC3 2 G B 29 ? G B 2133 . ? 1_555 ? 54 BC3 2 G B 53 ? G B 2157 . ? 1_555 ? # _database_PDB_matrix.entry_id 3UMY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3UMY _atom_sites.fract_transf_matrix[1][1] 0.014901 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014531 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011257 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 HIS 3 3 3 HIS HIS A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 GLN 101 101 101 GLN GLN A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 TRP 107 107 107 TRP TRP A . n A 1 108 MET 108 108 108 MET MET A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 PHE 110 110 110 PHE PHE A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 ASP 118 118 118 ASP ASP A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 ASN 139 139 139 ASN ASN A . n A 1 140 PRO 140 140 140 PRO PRO A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 PHE 147 147 147 PHE PHE A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 ILE 152 152 152 ILE ILE A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 ARG 154 154 154 ARG ARG A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 ARG 160 160 160 ARG ARG A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 PHE 163 163 163 PHE PHE A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 HIS 172 172 172 HIS HIS A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 PRO 174 174 174 PRO PRO A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 LYS 177 177 177 LYS LYS A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 PHE 180 180 180 PHE PHE A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 ASN 188 188 188 ASN ASN A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 ARG 190 190 190 ARG ARG A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 PHE 192 192 192 PHE PHE A . n A 1 193 ILE 193 193 193 ILE ILE A . n A 1 194 ARG 194 194 194 ARG ARG A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 HIS 199 199 199 HIS HIS A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 PRO 201 201 201 PRO PRO A . n A 1 202 GLU 202 202 202 GLU GLU A . n A 1 203 GLY 203 203 203 GLY GLY A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 LYS 205 205 205 LYS LYS A . n A 1 206 GLY 206 206 206 GLY GLY A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 LEU 209 209 209 LEU LEU A . n A 1 210 ARG 210 210 210 ARG ARG A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 TYR 213 213 213 TYR TYR A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 THR 215 215 215 THR THR A . n A 1 216 THR 216 216 216 THR THR A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 MET 218 218 218 MET MET A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 PRO 220 220 220 PRO PRO A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 ARG 223 223 223 ARG ARG A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 ASN 225 225 225 ASN ASN A . n A 1 226 PRO 226 226 226 PRO PRO A . n A 1 227 HIS 227 227 227 HIS HIS A . n A 1 228 SER 228 228 228 SER SER A . n B 2 1 G 1 2105 1 G G B . n B 2 2 G 2 2106 2 G G B . n B 2 3 G 3 2107 3 G G B . n B 2 4 A 4 2108 4 A A B . n B 2 5 U 5 2109 5 U U B . n B 2 6 G 6 2110 6 G G B . n B 2 7 C 7 2111 7 C C B . n B 2 8 G 8 2112 8 G G B . n B 2 9 U 9 2113 9 U U B . n B 2 10 A 10 2114 10 A A B . n B 2 11 G 11 2115 11 G G B . n B 2 12 G 12 2116 12 G G B . n B 2 13 A 13 2117 13 A A B . n B 2 14 U 14 2118 14 U U B . n B 2 15 A 15 2119 15 A A B . n B 2 16 G 16 2120 16 G G B . n B 2 17 G 17 2121 17 G G B . n B 2 18 U 18 2122 18 U U B . n B 2 19 G 19 2123 19 G G B . n B 2 20 G 20 2124 20 G G B . n B 2 21 G 21 2125 21 G G B . n B 2 22 A 22 2126 22 A A B . n B 2 23 G 23 2127 23 G G B . n B 2 24 C 24 2128 24 C C B . n B 2 25 C 25 2129 25 C C B . n B 2 26 U 26 2130 26 U U B . n B 2 27 G 27 2131 27 G G B . n B 2 28 U 28 2132 28 U U B . n B 2 29 G 29 2133 29 G G B . n B 2 30 A 30 2134 30 A A B . n B 2 31 A 31 2135 31 A A B . n B 2 32 C 32 2136 32 C C B . n B 2 33 C 33 2137 33 C C B . n B 2 34 C 34 2138 34 C C B . n B 2 35 C 35 2139 35 C C B . n B 2 36 C 36 2140 36 C C B . n B 2 37 G 37 2141 37 G G B . n B 2 38 C 38 2142 38 C C B . n B 2 39 C 39 2143 39 C C B . n B 2 40 U 40 2144 40 U U B . n B 2 41 C 41 2145 41 C C B . n B 2 42 C 42 2146 42 C C B . n B 2 43 G 43 2147 43 G G B . n B 2 44 G 44 2148 44 G G B . n B 2 45 G 45 2149 45 G G B . n B 2 46 U 46 2150 46 U U B . n B 2 47 G 47 2151 47 G G B . n B 2 48 G 48 2152 48 G G B . n B 2 49 G 49 2153 49 G G B . n B 2 50 G 50 2154 50 G G B . n B 2 51 G 51 2155 51 G G B . n B 2 52 G 52 2156 52 G G B . n B 2 53 G 53 2157 53 G G B . n B 2 54 A 54 2158 54 A A B . n B 2 55 G 55 2159 55 G G B . n B 2 56 G 56 2160 56 G G B . n B 2 57 C 57 2161 57 C C B . n B 2 58 G 58 2162 58 G G B . n B 2 59 C 59 2163 59 C C B . n B 2 60 C 60 2164 60 C C B . n B 2 61 G 61 2165 61 G G B . n B 2 62 G 62 2166 62 G G B . n B 2 63 U 63 2167 63 U U B . n B 2 64 G 64 2168 64 G G B . n B 2 65 A 65 2169 65 A A B . n B 2 66 A 66 2170 66 A A B . n B 2 67 A 67 2171 67 A A B . n B 2 68 U 68 2172 68 U U B . n B 2 69 A 69 2173 69 A A B . n B 2 70 C 70 2174 70 C C B . n B 2 71 C 71 2175 71 C C B . n B 2 72 A 72 2176 72 A A B . n B 2 73 C 73 2177 73 C C B . n B 2 74 C 74 2178 74 C C B . n B 2 75 C 75 2179 75 C C B . n B 2 76 U 76 2180 76 U U B . n B 2 77 U 77 2181 77 U U B . n B 2 78 C 78 2182 78 C C B . n B 2 79 C 79 2183 79 C C B . n B 2 80 C 80 2184 80 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL 1 301 5 CL CL A . D 3 CL 1 302 6 CL CL A . E 4 SO4 1 303 9 SO4 SO4 A . F 5 NA 1 304 236 NA NA A . G 6 MG 1 2201 1 MG MG B . H 6 MG 1 2202 2 MG MG B . I 6 MG 1 2203 3 MG MG B . J 6 MG 1 2204 4 MG MG B . K 4 SO4 1 2205 7 SO4 SO4 B . L 4 SO4 1 2206 8 SO4 SO4 B . M 4 SO4 1 2207 10 SO4 SO4 B . N 4 SO4 1 2208 11 SO4 SO4 B . O 7 HOH 1 401 2 HOH HOH A . O 7 HOH 2 402 4 HOH HOH A . O 7 HOH 3 403 5 HOH HOH A . O 7 HOH 4 404 6 HOH HOH A . O 7 HOH 5 405 10 HOH HOH A . O 7 HOH 6 406 11 HOH HOH A . O 7 HOH 7 407 19 HOH HOH A . O 7 HOH 8 408 22 HOH HOH A . O 7 HOH 9 409 24 HOH HOH A . O 7 HOH 10 410 25 HOH HOH A . O 7 HOH 11 411 30 HOH HOH A . O 7 HOH 12 412 31 HOH HOH A . O 7 HOH 13 413 34 HOH HOH A . O 7 HOH 14 414 40 HOH HOH A . O 7 HOH 15 415 46 HOH HOH A . O 7 HOH 16 416 47 HOH HOH A . O 7 HOH 17 417 49 HOH HOH A . O 7 HOH 18 418 50 HOH HOH A . O 7 HOH 19 419 63 HOH HOH A . O 7 HOH 20 420 65 HOH HOH A . O 7 HOH 21 421 66 HOH HOH A . O 7 HOH 22 422 69 HOH HOH A . O 7 HOH 23 423 70 HOH HOH A . O 7 HOH 24 424 72 HOH HOH A . O 7 HOH 25 425 74 HOH HOH A . O 7 HOH 26 426 75 HOH HOH A . O 7 HOH 27 427 77 HOH HOH A . O 7 HOH 28 428 79 HOH HOH A . O 7 HOH 29 429 80 HOH HOH A . O 7 HOH 30 430 81 HOH HOH A . O 7 HOH 31 431 83 HOH HOH A . O 7 HOH 32 432 85 HOH HOH A . O 7 HOH 33 433 86 HOH HOH A . O 7 HOH 34 434 89 HOH HOH A . O 7 HOH 35 435 96 HOH HOH A . O 7 HOH 36 436 100 HOH HOH A . O 7 HOH 37 437 101 HOH HOH A . O 7 HOH 38 438 103 HOH HOH A . O 7 HOH 39 439 104 HOH HOH A . O 7 HOH 40 440 105 HOH HOH A . O 7 HOH 41 441 108 HOH HOH A . O 7 HOH 42 442 112 HOH HOH A . O 7 HOH 43 443 116 HOH HOH A . O 7 HOH 44 444 117 HOH HOH A . O 7 HOH 45 445 118 HOH HOH A . O 7 HOH 46 446 119 HOH HOH A . O 7 HOH 47 447 120 HOH HOH A . O 7 HOH 48 448 121 HOH HOH A . O 7 HOH 49 449 122 HOH HOH A . O 7 HOH 50 450 123 HOH HOH A . O 7 HOH 51 451 124 HOH HOH A . O 7 HOH 52 452 125 HOH HOH A . O 7 HOH 53 453 126 HOH HOH A . O 7 HOH 54 454 127 HOH HOH A . O 7 HOH 55 455 139 HOH HOH A . O 7 HOH 56 456 141 HOH HOH A . O 7 HOH 57 457 145 HOH HOH A . O 7 HOH 58 458 146 HOH HOH A . O 7 HOH 59 459 148 HOH HOH A . O 7 HOH 60 460 149 HOH HOH A . O 7 HOH 61 461 151 HOH HOH A . O 7 HOH 62 462 152 HOH HOH A . O 7 HOH 63 463 154 HOH HOH A . O 7 HOH 64 464 155 HOH HOH A . O 7 HOH 65 465 158 HOH HOH A . O 7 HOH 66 466 159 HOH HOH A . O 7 HOH 67 467 162 HOH HOH A . O 7 HOH 68 468 163 HOH HOH A . O 7 HOH 69 469 165 HOH HOH A . O 7 HOH 70 470 169 HOH HOH A . O 7 HOH 71 471 170 HOH HOH A . O 7 HOH 72 472 171 HOH HOH A . O 7 HOH 73 473 177 HOH HOH A . O 7 HOH 74 474 178 HOH HOH A . O 7 HOH 75 475 181 HOH HOH A . O 7 HOH 76 476 185 HOH HOH A . P 7 HOH 1 2301 1 HOH HOH B . P 7 HOH 2 2302 90 HOH HOH B . P 7 HOH 3 2303 91 HOH HOH B . P 7 HOH 4 2304 92 HOH HOH B . P 7 HOH 5 2305 93 HOH HOH B . P 7 HOH 6 2306 94 HOH HOH B . P 7 HOH 7 2307 95 HOH HOH B . P 7 HOH 8 2308 3 HOH HOH B . P 7 HOH 9 2309 97 HOH HOH B . P 7 HOH 10 2310 98 HOH HOH B . P 7 HOH 11 2311 99 HOH HOH B . P 7 HOH 12 2312 8 HOH HOH B . P 7 HOH 13 2313 9 HOH HOH B . P 7 HOH 14 2314 102 HOH HOH B . P 7 HOH 15 2315 12 HOH HOH B . P 7 HOH 16 2316 13 HOH HOH B . P 7 HOH 17 2317 14 HOH HOH B . P 7 HOH 18 2318 106 HOH HOH B . P 7 HOH 19 2319 107 HOH HOH B . P 7 HOH 20 2320 15 HOH HOH B . P 7 HOH 21 2321 109 HOH HOH B . P 7 HOH 22 2322 110 HOH HOH B . P 7 HOH 23 2323 16 HOH HOH B . P 7 HOH 24 2324 17 HOH HOH B . P 7 HOH 25 2325 113 HOH HOH B . P 7 HOH 26 2326 114 HOH HOH B . P 7 HOH 27 2327 115 HOH HOH B . P 7 HOH 28 2328 18 HOH HOH B . P 7 HOH 29 2329 20 HOH HOH B . P 7 HOH 30 2330 21 HOH HOH B . P 7 HOH 31 2331 23 HOH HOH B . P 7 HOH 32 2332 26 HOH HOH B . P 7 HOH 33 2333 27 HOH HOH B . P 7 HOH 34 2334 28 HOH HOH B . P 7 HOH 35 2335 29 HOH HOH B . P 7 HOH 36 2336 32 HOH HOH B . P 7 HOH 37 2337 33 HOH HOH B . P 7 HOH 38 2338 35 HOH HOH B . P 7 HOH 39 2339 36 HOH HOH B . P 7 HOH 40 2340 128 HOH HOH B . P 7 HOH 41 2341 129 HOH HOH B . P 7 HOH 42 2342 130 HOH HOH B . P 7 HOH 43 2343 131 HOH HOH B . P 7 HOH 44 2344 132 HOH HOH B . P 7 HOH 45 2345 133 HOH HOH B . P 7 HOH 46 2346 134 HOH HOH B . P 7 HOH 47 2347 135 HOH HOH B . P 7 HOH 48 2348 136 HOH HOH B . P 7 HOH 49 2349 137 HOH HOH B . P 7 HOH 50 2350 138 HOH HOH B . P 7 HOH 51 2351 37 HOH HOH B . P 7 HOH 52 2352 140 HOH HOH B . P 7 HOH 53 2353 38 HOH HOH B . P 7 HOH 54 2354 142 HOH HOH B . P 7 HOH 55 2355 143 HOH HOH B . P 7 HOH 56 2356 144 HOH HOH B . P 7 HOH 57 2357 39 HOH HOH B . P 7 HOH 58 2358 41 HOH HOH B . P 7 HOH 59 2359 147 HOH HOH B . P 7 HOH 60 2360 42 HOH HOH B . P 7 HOH 61 2361 43 HOH HOH B . P 7 HOH 62 2362 150 HOH HOH B . P 7 HOH 63 2363 44 HOH HOH B . P 7 HOH 64 2364 45 HOH HOH B . P 7 HOH 65 2365 153 HOH HOH B . P 7 HOH 66 2366 48 HOH HOH B . P 7 HOH 67 2367 51 HOH HOH B . P 7 HOH 68 2368 156 HOH HOH B . P 7 HOH 69 2369 157 HOH HOH B . P 7 HOH 70 2370 52 HOH HOH B . P 7 HOH 71 2371 53 HOH HOH B . P 7 HOH 72 2372 160 HOH HOH B . P 7 HOH 73 2373 161 HOH HOH B . P 7 HOH 74 2374 54 HOH HOH B . P 7 HOH 75 2375 55 HOH HOH B . P 7 HOH 76 2376 164 HOH HOH B . P 7 HOH 77 2377 56 HOH HOH B . P 7 HOH 78 2378 166 HOH HOH B . P 7 HOH 79 2379 167 HOH HOH B . P 7 HOH 80 2380 168 HOH HOH B . P 7 HOH 81 2381 57 HOH HOH B . P 7 HOH 82 2382 58 HOH HOH B . P 7 HOH 83 2383 59 HOH HOH B . P 7 HOH 84 2384 172 HOH HOH B . P 7 HOH 85 2385 173 HOH HOH B . P 7 HOH 86 2386 174 HOH HOH B . P 7 HOH 87 2387 175 HOH HOH B . P 7 HOH 88 2388 176 HOH HOH B . P 7 HOH 89 2389 60 HOH HOH B . P 7 HOH 90 2390 61 HOH HOH B . P 7 HOH 91 2391 179 HOH HOH B . P 7 HOH 92 2392 180 HOH HOH B . P 7 HOH 93 2393 62 HOH HOH B . P 7 HOH 94 2394 182 HOH HOH B . P 7 HOH 95 2395 183 HOH HOH B . P 7 HOH 96 2396 184 HOH HOH B . P 7 HOH 97 2397 64 HOH HOH B . P 7 HOH 98 2398 186 HOH HOH B . P 7 HOH 99 2399 187 HOH HOH B . P 7 HOH 100 2400 67 HOH HOH B . P 7 HOH 101 2401 189 HOH HOH B . P 7 HOH 102 2402 68 HOH HOH B . P 7 HOH 103 2403 71 HOH HOH B . P 7 HOH 104 2404 73 HOH HOH B . P 7 HOH 105 2405 76 HOH HOH B . P 7 HOH 106 2406 78 HOH HOH B . P 7 HOH 107 2407 82 HOH HOH B . P 7 HOH 108 2408 84 HOH HOH B . P 7 HOH 109 2409 87 HOH HOH B . P 7 HOH 110 2410 88 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4610 ? 1 MORE -149 ? 1 'SSA (A^2)' 20510 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 42 ? A GLU 42 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 O ? A THR 216 ? A THR 216 ? 1_555 86.4 ? 2 OE2 ? A GLU 42 ? A GLU 42 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 O2 ? B C 71 ? B C 2175 ? 1_555 103.0 ? 3 O ? A THR 216 ? A THR 216 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 O2 ? B C 71 ? B C 2175 ? 1_555 138.5 ? 4 OE2 ? A GLU 42 ? A GLU 42 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 "O2'" ? B C 71 ? B C 2175 ? 1_555 153.5 ? 5 O ? A THR 216 ? A THR 216 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 "O2'" ? B C 71 ? B C 2175 ? 1_555 75.6 ? 6 O2 ? B C 71 ? B C 2175 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 "O2'" ? B C 71 ? B C 2175 ? 1_555 79.4 ? 7 OE2 ? A GLU 42 ? A GLU 42 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 "O4'" ? B A 72 ? B A 2176 ? 1_555 130.6 ? 8 O ? A THR 216 ? A THR 216 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 "O4'" ? B A 72 ? B A 2176 ? 1_555 121.3 ? 9 O2 ? B C 71 ? B C 2175 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 "O4'" ? B A 72 ? B A 2176 ? 1_555 83.0 ? 10 "O2'" ? B C 71 ? B C 2175 ? 1_555 NA ? F NA . ? A NA 304 ? 1_555 "O4'" ? B A 72 ? B A 2176 ? 1_555 75.8 ? 11 O4 ? B U 18 ? B U 2122 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O6 ? B G 19 ? B G 2123 ? 1_555 84.4 ? 12 O4 ? B U 18 ? B U 2122 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2320 ? 1_555 167.0 ? 13 O6 ? B G 19 ? B G 2123 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2320 ? 1_555 82.9 ? 14 O4 ? B U 18 ? B U 2122 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2323 ? 1_555 84.9 ? 15 O6 ? B G 19 ? B G 2123 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2323 ? 1_555 100.1 ? 16 O ? P HOH . ? B HOH 2320 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2323 ? 1_555 100.1 ? 17 O4 ? B U 18 ? B U 2122 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2324 ? 1_555 90.0 ? 18 O6 ? B G 19 ? B G 2123 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2324 ? 1_555 88.2 ? 19 O ? P HOH . ? B HOH 2320 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2324 ? 1_555 86.8 ? 20 O ? P HOH . ? B HOH 2323 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2324 ? 1_555 169.8 ? 21 O4 ? B U 18 ? B U 2122 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2328 ? 1_555 91.7 ? 22 O6 ? B G 19 ? B G 2123 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2328 ? 1_555 175.5 ? 23 O ? P HOH . ? B HOH 2320 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2328 ? 1_555 100.9 ? 24 O ? P HOH . ? B HOH 2323 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2328 ? 1_555 81.9 ? 25 O ? P HOH . ? B HOH 2324 ? 1_555 MG ? G MG . ? B MG 2201 ? 1_555 O ? P HOH . ? B HOH 2328 ? 1_555 89.5 ? 26 O6 ? B G 21 ? B G 2125 ? 1_555 MG ? J MG . ? B MG 2204 ? 1_555 O ? P HOH . ? B HOH 2371 ? 1_555 70.2 ? 27 O6 ? B G 21 ? B G 2125 ? 1_555 MG ? J MG . ? B MG 2204 ? 1_555 O ? P HOH . ? B HOH 2374 ? 1_555 67.8 ? 28 O ? P HOH . ? B HOH 2371 ? 1_555 MG ? J MG . ? B MG 2204 ? 1_555 O ? P HOH . ? B HOH 2374 ? 1_555 133.1 ? 29 O6 ? B G 21 ? B G 2125 ? 1_555 MG ? J MG . ? B MG 2204 ? 1_555 O ? P HOH . ? B HOH 2375 ? 1_555 74.8 ? 30 O ? P HOH . ? B HOH 2371 ? 1_555 MG ? J MG . ? B MG 2204 ? 1_555 O ? P HOH . ? B HOH 2375 ? 1_555 73.5 ? 31 O ? P HOH . ? B HOH 2374 ? 1_555 MG ? J MG . ? B MG 2204 ? 1_555 O ? P HOH . ? B HOH 2375 ? 1_555 76.2 ? 32 O2 ? B C 24 ? B C 2128 ? 1_555 MG ? H MG . ? B MG 2202 ? 1_555 "O2'" ? B C 24 ? B C 2128 ? 1_555 83.3 ? 33 O2 ? B C 24 ? B C 2128 ? 1_555 MG ? H MG . ? B MG 2202 ? 1_555 "O2'" ? B A 69 ? B A 2173 ? 1_555 95.1 ? 34 "O2'" ? B C 24 ? B C 2128 ? 1_555 MG ? H MG . ? B MG 2202 ? 1_555 "O2'" ? B A 69 ? B A 2173 ? 1_555 124.3 ? 35 O2 ? B C 24 ? B C 2128 ? 1_555 MG ? H MG . ? B MG 2202 ? 1_555 O ? P HOH . ? B HOH 2327 ? 1_555 138.5 ? 36 "O2'" ? B C 24 ? B C 2128 ? 1_555 MG ? H MG . ? B MG 2202 ? 1_555 O ? P HOH . ? B HOH 2327 ? 1_555 105.1 ? 37 "O2'" ? B A 69 ? B A 2173 ? 1_555 MG ? H MG . ? B MG 2202 ? 1_555 O ? P HOH . ? B HOH 2327 ? 1_555 111.3 ? 38 OP2 ? B G 51 ? B G 2155 ? 1_555 MG ? I MG . ? B MG 2203 ? 1_555 O6 ? B G 53 ? B G 2157 ? 1_555 156.1 ? 39 OP2 ? B G 51 ? B G 2155 ? 1_555 MG ? I MG . ? B MG 2203 ? 1_555 O ? P HOH . ? B HOH 2353 ? 1_555 109.0 ? 40 O6 ? B G 53 ? B G 2157 ? 1_555 MG ? I MG . ? B MG 2203 ? 1_555 O ? P HOH . ? B HOH 2353 ? 1_555 50.2 ? 41 OP2 ? B G 51 ? B G 2155 ? 1_555 MG ? I MG . ? B MG 2203 ? 1_555 O ? P HOH . ? B HOH 2357 ? 1_555 116.1 ? 42 O6 ? B G 53 ? B G 2157 ? 1_555 MG ? I MG . ? B MG 2203 ? 1_555 O ? P HOH . ? B HOH 2357 ? 1_555 51.7 ? 43 O ? P HOH . ? B HOH 2353 ? 1_555 MG ? I MG . ? B MG 2203 ? 1_555 O ? P HOH . ? B HOH 2357 ? 1_555 72.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-31 2 'Structure model' 1 1 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 2 'Structure model' '_pdbx_struct_conn_angle.value' 24 2 'Structure model' '_struct_conn.pdbx_dist_value' 25 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 2 'Structure model' '_struct_ref_seq_dif.details' 40 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.2_869)' ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 2105 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 2105 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.482 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.125 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N1 _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 G _pdbx_validate_rmsd_angle.auth_seq_id_1 2123 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C6 _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 G _pdbx_validate_rmsd_angle.auth_seq_id_2 2123 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 O6 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 G _pdbx_validate_rmsd_angle.auth_seq_id_3 2123 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.23 _pdbx_validate_rmsd_angle.angle_target_value 119.90 _pdbx_validate_rmsd_angle.angle_deviation -3.67 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.60 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 36 ? ? -91.62 37.79 2 1 GLU A 97 ? ? -56.39 -6.39 3 1 GLU A 98 ? ? -55.87 -70.58 4 1 ILE A 99 ? ? -64.28 3.44 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CL CL CL N N 146 G OP3 O N N 147 G P P N N 148 G OP1 O N N 149 G OP2 O N N 150 G "O5'" O N N 151 G "C5'" C N N 152 G "C4'" C N R 153 G "O4'" O N N 154 G "C3'" C N S 155 G "O3'" O N N 156 G "C2'" C N R 157 G "O2'" O N N 158 G "C1'" C N R 159 G N9 N Y N 160 G C8 C Y N 161 G N7 N Y N 162 G C5 C Y N 163 G C6 C N N 164 G O6 O N N 165 G N1 N N N 166 G C2 C N N 167 G N2 N N N 168 G N3 N N N 169 G C4 C Y N 170 G HOP3 H N N 171 G HOP2 H N N 172 G "H5'" H N N 173 G "H5''" H N N 174 G "H4'" H N N 175 G "H3'" H N N 176 G "HO3'" H N N 177 G "H2'" H N N 178 G "HO2'" H N N 179 G "H1'" H N N 180 G H8 H N N 181 G H1 H N N 182 G H21 H N N 183 G H22 H N N 184 GLN N N N N 185 GLN CA C N S 186 GLN C C N N 187 GLN O O N N 188 GLN CB C N N 189 GLN CG C N N 190 GLN CD C N N 191 GLN OE1 O N N 192 GLN NE2 N N N 193 GLN OXT O N N 194 GLN H H N N 195 GLN H2 H N N 196 GLN HA H N N 197 GLN HB2 H N N 198 GLN HB3 H N N 199 GLN HG2 H N N 200 GLN HG3 H N N 201 GLN HE21 H N N 202 GLN HE22 H N N 203 GLN HXT H N N 204 GLU N N N N 205 GLU CA C N S 206 GLU C C N N 207 GLU O O N N 208 GLU CB C N N 209 GLU CG C N N 210 GLU CD C N N 211 GLU OE1 O N N 212 GLU OE2 O N N 213 GLU OXT O N N 214 GLU H H N N 215 GLU H2 H N N 216 GLU HA H N N 217 GLU HB2 H N N 218 GLU HB3 H N N 219 GLU HG2 H N N 220 GLU HG3 H N N 221 GLU HE2 H N N 222 GLU HXT H N N 223 GLY N N N N 224 GLY CA C N N 225 GLY C C N N 226 GLY O O N N 227 GLY OXT O N N 228 GLY H H N N 229 GLY H2 H N N 230 GLY HA2 H N N 231 GLY HA3 H N N 232 GLY HXT H N N 233 HIS N N N N 234 HIS CA C N S 235 HIS C C N N 236 HIS O O N N 237 HIS CB C N N 238 HIS CG C Y N 239 HIS ND1 N Y N 240 HIS CD2 C Y N 241 HIS CE1 C Y N 242 HIS NE2 N Y N 243 HIS OXT O N N 244 HIS H H N N 245 HIS H2 H N N 246 HIS HA H N N 247 HIS HB2 H N N 248 HIS HB3 H N N 249 HIS HD1 H N N 250 HIS HD2 H N N 251 HIS HE1 H N N 252 HIS HE2 H N N 253 HIS HXT H N N 254 HOH O O N N 255 HOH H1 H N N 256 HOH H2 H N N 257 ILE N N N N 258 ILE CA C N S 259 ILE C C N N 260 ILE O O N N 261 ILE CB C N S 262 ILE CG1 C N N 263 ILE CG2 C N N 264 ILE CD1 C N N 265 ILE OXT O N N 266 ILE H H N N 267 ILE H2 H N N 268 ILE HA H N N 269 ILE HB H N N 270 ILE HG12 H N N 271 ILE HG13 H N N 272 ILE HG21 H N N 273 ILE HG22 H N N 274 ILE HG23 H N N 275 ILE HD11 H N N 276 ILE HD12 H N N 277 ILE HD13 H N N 278 ILE HXT H N N 279 LEU N N N N 280 LEU CA C N S 281 LEU C C N N 282 LEU O O N N 283 LEU CB C N N 284 LEU CG C N N 285 LEU CD1 C N N 286 LEU CD2 C N N 287 LEU OXT O N N 288 LEU H H N N 289 LEU H2 H N N 290 LEU HA H N N 291 LEU HB2 H N N 292 LEU HB3 H N N 293 LEU HG H N N 294 LEU HD11 H N N 295 LEU HD12 H N N 296 LEU HD13 H N N 297 LEU HD21 H N N 298 LEU HD22 H N N 299 LEU HD23 H N N 300 LEU HXT H N N 301 LYS N N N N 302 LYS CA C N S 303 LYS C C N N 304 LYS O O N N 305 LYS CB C N N 306 LYS CG C N N 307 LYS CD C N N 308 LYS CE C N N 309 LYS NZ N N N 310 LYS OXT O N N 311 LYS H H N N 312 LYS H2 H N N 313 LYS HA H N N 314 LYS HB2 H N N 315 LYS HB3 H N N 316 LYS HG2 H N N 317 LYS HG3 H N N 318 LYS HD2 H N N 319 LYS HD3 H N N 320 LYS HE2 H N N 321 LYS HE3 H N N 322 LYS HZ1 H N N 323 LYS HZ2 H N N 324 LYS HZ3 H N N 325 LYS HXT H N N 326 MET N N N N 327 MET CA C N S 328 MET C C N N 329 MET O O N N 330 MET CB C N N 331 MET CG C N N 332 MET SD S N N 333 MET CE C N N 334 MET OXT O N N 335 MET H H N N 336 MET H2 H N N 337 MET HA H N N 338 MET HB2 H N N 339 MET HB3 H N N 340 MET HG2 H N N 341 MET HG3 H N N 342 MET HE1 H N N 343 MET HE2 H N N 344 MET HE3 H N N 345 MET HXT H N N 346 MG MG MG N N 347 NA NA NA N N 348 PHE N N N N 349 PHE CA C N S 350 PHE C C N N 351 PHE O O N N 352 PHE CB C N N 353 PHE CG C Y N 354 PHE CD1 C Y N 355 PHE CD2 C Y N 356 PHE CE1 C Y N 357 PHE CE2 C Y N 358 PHE CZ C Y N 359 PHE OXT O N N 360 PHE H H N N 361 PHE H2 H N N 362 PHE HA H N N 363 PHE HB2 H N N 364 PHE HB3 H N N 365 PHE HD1 H N N 366 PHE HD2 H N N 367 PHE HE1 H N N 368 PHE HE2 H N N 369 PHE HZ H N N 370 PHE HXT H N N 371 PRO N N N N 372 PRO CA C N S 373 PRO C C N N 374 PRO O O N N 375 PRO CB C N N 376 PRO CG C N N 377 PRO CD C N N 378 PRO OXT O N N 379 PRO H H N N 380 PRO HA H N N 381 PRO HB2 H N N 382 PRO HB3 H N N 383 PRO HG2 H N N 384 PRO HG3 H N N 385 PRO HD2 H N N 386 PRO HD3 H N N 387 PRO HXT H N N 388 SER N N N N 389 SER CA C N S 390 SER C C N N 391 SER O O N N 392 SER CB C N N 393 SER OG O N N 394 SER OXT O N N 395 SER H H N N 396 SER H2 H N N 397 SER HA H N N 398 SER HB2 H N N 399 SER HB3 H N N 400 SER HG H N N 401 SER HXT H N N 402 SO4 S S N N 403 SO4 O1 O N N 404 SO4 O2 O N N 405 SO4 O3 O N N 406 SO4 O4 O N N 407 THR N N N N 408 THR CA C N S 409 THR C C N N 410 THR O O N N 411 THR CB C N R 412 THR OG1 O N N 413 THR CG2 C N N 414 THR OXT O N N 415 THR H H N N 416 THR H2 H N N 417 THR HA H N N 418 THR HB H N N 419 THR HG1 H N N 420 THR HG21 H N N 421 THR HG22 H N N 422 THR HG23 H N N 423 THR HXT H N N 424 TRP N N N N 425 TRP CA C N S 426 TRP C C N N 427 TRP O O N N 428 TRP CB C N N 429 TRP CG C Y N 430 TRP CD1 C Y N 431 TRP CD2 C Y N 432 TRP NE1 N Y N 433 TRP CE2 C Y N 434 TRP CE3 C Y N 435 TRP CZ2 C Y N 436 TRP CZ3 C Y N 437 TRP CH2 C Y N 438 TRP OXT O N N 439 TRP H H N N 440 TRP H2 H N N 441 TRP HA H N N 442 TRP HB2 H N N 443 TRP HB3 H N N 444 TRP HD1 H N N 445 TRP HE1 H N N 446 TRP HE3 H N N 447 TRP HZ2 H N N 448 TRP HZ3 H N N 449 TRP HH2 H N N 450 TRP HXT H N N 451 TYR N N N N 452 TYR CA C N S 453 TYR C C N N 454 TYR O O N N 455 TYR CB C N N 456 TYR CG C Y N 457 TYR CD1 C Y N 458 TYR CD2 C Y N 459 TYR CE1 C Y N 460 TYR CE2 C Y N 461 TYR CZ C Y N 462 TYR OH O N N 463 TYR OXT O N N 464 TYR H H N N 465 TYR H2 H N N 466 TYR HA H N N 467 TYR HB2 H N N 468 TYR HB3 H N N 469 TYR HD1 H N N 470 TYR HD2 H N N 471 TYR HE1 H N N 472 TYR HE2 H N N 473 TYR HH H N N 474 TYR HXT H N N 475 U OP3 O N N 476 U P P N N 477 U OP1 O N N 478 U OP2 O N N 479 U "O5'" O N N 480 U "C5'" C N N 481 U "C4'" C N R 482 U "O4'" O N N 483 U "C3'" C N S 484 U "O3'" O N N 485 U "C2'" C N R 486 U "O2'" O N N 487 U "C1'" C N R 488 U N1 N N N 489 U C2 C N N 490 U O2 O N N 491 U N3 N N N 492 U C4 C N N 493 U O4 O N N 494 U C5 C N N 495 U C6 C N N 496 U HOP3 H N N 497 U HOP2 H N N 498 U "H5'" H N N 499 U "H5''" H N N 500 U "H4'" H N N 501 U "H3'" H N N 502 U "HO3'" H N N 503 U "H2'" H N N 504 U "HO2'" H N N 505 U "H1'" H N N 506 U H3 H N N 507 U H5 H N N 508 U H6 H N N 509 VAL N N N N 510 VAL CA C N S 511 VAL C C N N 512 VAL O O N N 513 VAL CB C N N 514 VAL CG1 C N N 515 VAL CG2 C N N 516 VAL OXT O N N 517 VAL H H N N 518 VAL H2 H N N 519 VAL HA H N N 520 VAL HB H N N 521 VAL HG11 H N N 522 VAL HG12 H N N 523 VAL HG13 H N N 524 VAL HG21 H N N 525 VAL HG22 H N N 526 VAL HG23 H N N 527 VAL HXT H N N 528 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 HIS N CA sing N N 231 HIS N H sing N N 232 HIS N H2 sing N N 233 HIS CA C sing N N 234 HIS CA CB sing N N 235 HIS CA HA sing N N 236 HIS C O doub N N 237 HIS C OXT sing N N 238 HIS CB CG sing N N 239 HIS CB HB2 sing N N 240 HIS CB HB3 sing N N 241 HIS CG ND1 sing Y N 242 HIS CG CD2 doub Y N 243 HIS ND1 CE1 doub Y N 244 HIS ND1 HD1 sing N N 245 HIS CD2 NE2 sing Y N 246 HIS CD2 HD2 sing N N 247 HIS CE1 NE2 sing Y N 248 HIS CE1 HE1 sing N N 249 HIS NE2 HE2 sing N N 250 HIS OXT HXT sing N N 251 HOH O H1 sing N N 252 HOH O H2 sing N N 253 ILE N CA sing N N 254 ILE N H sing N N 255 ILE N H2 sing N N 256 ILE CA C sing N N 257 ILE CA CB sing N N 258 ILE CA HA sing N N 259 ILE C O doub N N 260 ILE C OXT sing N N 261 ILE CB CG1 sing N N 262 ILE CB CG2 sing N N 263 ILE CB HB sing N N 264 ILE CG1 CD1 sing N N 265 ILE CG1 HG12 sing N N 266 ILE CG1 HG13 sing N N 267 ILE CG2 HG21 sing N N 268 ILE CG2 HG22 sing N N 269 ILE CG2 HG23 sing N N 270 ILE CD1 HD11 sing N N 271 ILE CD1 HD12 sing N N 272 ILE CD1 HD13 sing N N 273 ILE OXT HXT sing N N 274 LEU N CA sing N N 275 LEU N H sing N N 276 LEU N H2 sing N N 277 LEU CA C sing N N 278 LEU CA CB sing N N 279 LEU CA HA sing N N 280 LEU C O doub N N 281 LEU C OXT sing N N 282 LEU CB CG sing N N 283 LEU CB HB2 sing N N 284 LEU CB HB3 sing N N 285 LEU CG CD1 sing N N 286 LEU CG CD2 sing N N 287 LEU CG HG sing N N 288 LEU CD1 HD11 sing N N 289 LEU CD1 HD12 sing N N 290 LEU CD1 HD13 sing N N 291 LEU CD2 HD21 sing N N 292 LEU CD2 HD22 sing N N 293 LEU CD2 HD23 sing N N 294 LEU OXT HXT sing N N 295 LYS N CA sing N N 296 LYS N H sing N N 297 LYS N H2 sing N N 298 LYS CA C sing N N 299 LYS CA CB sing N N 300 LYS CA HA sing N N 301 LYS C O doub N N 302 LYS C OXT sing N N 303 LYS CB CG sing N N 304 LYS CB HB2 sing N N 305 LYS CB HB3 sing N N 306 LYS CG CD sing N N 307 LYS CG HG2 sing N N 308 LYS CG HG3 sing N N 309 LYS CD CE sing N N 310 LYS CD HD2 sing N N 311 LYS CD HD3 sing N N 312 LYS CE NZ sing N N 313 LYS CE HE2 sing N N 314 LYS CE HE3 sing N N 315 LYS NZ HZ1 sing N N 316 LYS NZ HZ2 sing N N 317 LYS NZ HZ3 sing N N 318 LYS OXT HXT sing N N 319 MET N CA sing N N 320 MET N H sing N N 321 MET N H2 sing N N 322 MET CA C sing N N 323 MET CA CB sing N N 324 MET CA HA sing N N 325 MET C O doub N N 326 MET C OXT sing N N 327 MET CB CG sing N N 328 MET CB HB2 sing N N 329 MET CB HB3 sing N N 330 MET CG SD sing N N 331 MET CG HG2 sing N N 332 MET CG HG3 sing N N 333 MET SD CE sing N N 334 MET CE HE1 sing N N 335 MET CE HE2 sing N N 336 MET CE HE3 sing N N 337 MET OXT HXT sing N N 338 PHE N CA sing N N 339 PHE N H sing N N 340 PHE N H2 sing N N 341 PHE CA C sing N N 342 PHE CA CB sing N N 343 PHE CA HA sing N N 344 PHE C O doub N N 345 PHE C OXT sing N N 346 PHE CB CG sing N N 347 PHE CB HB2 sing N N 348 PHE CB HB3 sing N N 349 PHE CG CD1 doub Y N 350 PHE CG CD2 sing Y N 351 PHE CD1 CE1 sing Y N 352 PHE CD1 HD1 sing N N 353 PHE CD2 CE2 doub Y N 354 PHE CD2 HD2 sing N N 355 PHE CE1 CZ doub Y N 356 PHE CE1 HE1 sing N N 357 PHE CE2 CZ sing Y N 358 PHE CE2 HE2 sing N N 359 PHE CZ HZ sing N N 360 PHE OXT HXT sing N N 361 PRO N CA sing N N 362 PRO N CD sing N N 363 PRO N H sing N N 364 PRO CA C sing N N 365 PRO CA CB sing N N 366 PRO CA HA sing N N 367 PRO C O doub N N 368 PRO C OXT sing N N 369 PRO CB CG sing N N 370 PRO CB HB2 sing N N 371 PRO CB HB3 sing N N 372 PRO CG CD sing N N 373 PRO CG HG2 sing N N 374 PRO CG HG3 sing N N 375 PRO CD HD2 sing N N 376 PRO CD HD3 sing N N 377 PRO OXT HXT sing N N 378 SER N CA sing N N 379 SER N H sing N N 380 SER N H2 sing N N 381 SER CA C sing N N 382 SER CA CB sing N N 383 SER CA HA sing N N 384 SER C O doub N N 385 SER C OXT sing N N 386 SER CB OG sing N N 387 SER CB HB2 sing N N 388 SER CB HB3 sing N N 389 SER OG HG sing N N 390 SER OXT HXT sing N N 391 SO4 S O1 doub N N 392 SO4 S O2 doub N N 393 SO4 S O3 sing N N 394 SO4 S O4 sing N N 395 THR N CA sing N N 396 THR N H sing N N 397 THR N H2 sing N N 398 THR CA C sing N N 399 THR CA CB sing N N 400 THR CA HA sing N N 401 THR C O doub N N 402 THR C OXT sing N N 403 THR CB OG1 sing N N 404 THR CB CG2 sing N N 405 THR CB HB sing N N 406 THR OG1 HG1 sing N N 407 THR CG2 HG21 sing N N 408 THR CG2 HG22 sing N N 409 THR CG2 HG23 sing N N 410 THR OXT HXT sing N N 411 TRP N CA sing N N 412 TRP N H sing N N 413 TRP N H2 sing N N 414 TRP CA C sing N N 415 TRP CA CB sing N N 416 TRP CA HA sing N N 417 TRP C O doub N N 418 TRP C OXT sing N N 419 TRP CB CG sing N N 420 TRP CB HB2 sing N N 421 TRP CB HB3 sing N N 422 TRP CG CD1 doub Y N 423 TRP CG CD2 sing Y N 424 TRP CD1 NE1 sing Y N 425 TRP CD1 HD1 sing N N 426 TRP CD2 CE2 doub Y N 427 TRP CD2 CE3 sing Y N 428 TRP NE1 CE2 sing Y N 429 TRP NE1 HE1 sing N N 430 TRP CE2 CZ2 sing Y N 431 TRP CE3 CZ3 doub Y N 432 TRP CE3 HE3 sing N N 433 TRP CZ2 CH2 doub Y N 434 TRP CZ2 HZ2 sing N N 435 TRP CZ3 CH2 sing Y N 436 TRP CZ3 HZ3 sing N N 437 TRP CH2 HH2 sing N N 438 TRP OXT HXT sing N N 439 TYR N CA sing N N 440 TYR N H sing N N 441 TYR N H2 sing N N 442 TYR CA C sing N N 443 TYR CA CB sing N N 444 TYR CA HA sing N N 445 TYR C O doub N N 446 TYR C OXT sing N N 447 TYR CB CG sing N N 448 TYR CB HB2 sing N N 449 TYR CB HB3 sing N N 450 TYR CG CD1 doub Y N 451 TYR CG CD2 sing Y N 452 TYR CD1 CE1 sing Y N 453 TYR CD1 HD1 sing N N 454 TYR CD2 CE2 doub Y N 455 TYR CD2 HD2 sing N N 456 TYR CE1 CZ doub Y N 457 TYR CE1 HE1 sing N N 458 TYR CE2 CZ sing Y N 459 TYR CE2 HE2 sing N N 460 TYR CZ OH sing N N 461 TYR OH HH sing N N 462 TYR OXT HXT sing N N 463 U OP3 P sing N N 464 U OP3 HOP3 sing N N 465 U P OP1 doub N N 466 U P OP2 sing N N 467 U P "O5'" sing N N 468 U OP2 HOP2 sing N N 469 U "O5'" "C5'" sing N N 470 U "C5'" "C4'" sing N N 471 U "C5'" "H5'" sing N N 472 U "C5'" "H5''" sing N N 473 U "C4'" "O4'" sing N N 474 U "C4'" "C3'" sing N N 475 U "C4'" "H4'" sing N N 476 U "O4'" "C1'" sing N N 477 U "C3'" "O3'" sing N N 478 U "C3'" "C2'" sing N N 479 U "C3'" "H3'" sing N N 480 U "O3'" "HO3'" sing N N 481 U "C2'" "O2'" sing N N 482 U "C2'" "C1'" sing N N 483 U "C2'" "H2'" sing N N 484 U "O2'" "HO2'" sing N N 485 U "C1'" N1 sing N N 486 U "C1'" "H1'" sing N N 487 U N1 C2 sing N N 488 U N1 C6 sing N N 489 U C2 O2 doub N N 490 U C2 N3 sing N N 491 U N3 C4 sing N N 492 U N3 H3 sing N N 493 U C4 O4 doub N N 494 U C4 C5 sing N N 495 U C5 C6 doub N N 496 U C5 H5 sing N N 497 U C6 H6 sing N N 498 VAL N CA sing N N 499 VAL N H sing N N 500 VAL N H2 sing N N 501 VAL CA C sing N N 502 VAL CA CB sing N N 503 VAL CA HA sing N N 504 VAL C O doub N N 505 VAL C OXT sing N N 506 VAL CB CG1 sing N N 507 VAL CB CG2 sing N N 508 VAL CB HB sing N N 509 VAL CG1 HG11 sing N N 510 VAL CG1 HG12 sing N N 511 VAL CG1 HG13 sing N N 512 VAL CG2 HG21 sing N N 513 VAL CG2 HG22 sing N N 514 VAL CG2 HG23 sing N N 515 VAL OXT HXT sing N N 516 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3UMY 'double helix' 3UMY 'a-form double helix' 3UMY 'parallel strands' 3UMY 'bulge loop' 3UMY 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B G 1 1_555 B C 80 1_555 0.183 0.282 0.130 1.674 -5.432 -3.908 1 B_G2105:C2184_B B 2105 ? B 2184 ? 19 1 1 B G 2 1_555 B C 79 1_555 0.133 -0.073 -0.052 1.305 -6.550 2.479 2 B_G2106:C2183_B B 2106 ? B 2183 ? 19 1 1 B G 3 1_555 B C 78 1_555 0.684 -0.343 0.083 0.685 -9.202 -0.900 3 B_G2107:C2182_B B 2107 ? B 2182 ? 19 1 1 B A 4 1_555 B U 77 1_555 -0.002 -0.352 -0.070 -2.913 -19.820 8.511 4 B_A2108:U2181_B B 2108 ? B 2181 ? 20 1 1 B U 5 1_555 B U 76 1_555 2.124 -1.678 0.169 -10.398 -22.287 16.158 5 B_U2109:U2180_B B 2109 ? B 2180 ? 16 1 1 B G 6 1_555 B C 75 1_555 -0.160 -0.366 -0.585 -0.826 -3.315 0.995 6 B_G2110:C2179_B B 2110 ? B 2179 ? 19 1 1 B G 16 1_555 B C 74 1_555 -0.264 -0.228 0.127 -4.682 -9.957 -0.574 7 B_G2120:C2178_B B 2120 ? B 2178 ? 19 1 1 B G 17 1_555 B C 73 1_555 -0.153 -0.205 0.113 -4.020 -14.617 -3.837 8 B_G2121:C2177_B B 2121 ? B 2177 ? 19 1 1 B U 18 1_555 B A 72 1_555 -0.216 -0.109 0.086 5.179 -11.011 3.574 9 B_U2122:A2176_B B 2122 ? B 2176 ? 20 1 1 B G 19 1_555 B C 71 1_555 -0.333 0.003 0.024 1.603 -8.647 2.882 10 B_G2123:C2175_B B 2123 ? B 2175 ? 19 1 1 B G 20 1_555 B C 70 1_555 -0.148 -0.133 -0.220 -11.356 -17.113 4.385 11 B_G2124:C2174_B B 2124 ? B 2174 ? 19 1 1 B G 21 1_555 B A 69 1_555 6.802 -4.399 0.032 -19.779 -12.171 -6.926 12 B_G2125:A2173_B B 2125 ? B 2173 ? 11 10 1 B A 22 1_555 B G 58 1_555 2.132 6.968 -1.570 47.959 -6.151 146.380 13 B_A2126:G2162_B B 2126 ? B 2162 ? ? 6 1 B G 23 1_555 B C 57 1_555 -0.309 -0.232 -0.223 -10.721 -9.002 1.845 14 B_G2127:C2161_B B 2127 ? B 2161 ? 19 1 1 B G 29 1_555 B A 54 1_555 6.259 -4.521 0.856 15.284 12.111 2.997 15 B_G2133:A2158_B B 2133 ? B 2158 ? 11 9 1 B A 30 1_555 B G 53 1_555 -6.431 -4.677 0.306 -21.301 19.838 -1.720 16 B_A2134:G2157_B B 2134 ? B 2157 ? 11 10 1 B A 31 1_555 B G 52 1_555 -6.861 -4.163 0.215 13.716 -2.629 -1.868 17 B_A2135:G2156_B B 2135 ? B 2156 ? 11 10 1 B C 32 1_555 B G 51 1_555 -0.049 -0.061 -0.419 18.099 -14.813 1.805 18 B_C2136:G2155_B B 2136 ? B 2155 ? 19 1 1 B C 33 1_555 B G 50 1_555 0.241 -0.104 -0.086 5.524 -11.646 3.198 19 B_C2137:G2154_B B 2137 ? B 2154 ? 19 1 1 B C 34 1_555 B G 49 1_555 0.451 -0.162 0.023 2.922 -6.696 3.549 20 B_C2138:G2153_B B 2138 ? B 2153 ? 19 1 1 B C 35 1_555 B G 48 1_555 0.326 -0.194 -0.059 4.485 -7.126 0.847 21 B_C2139:G2152_B B 2139 ? B 2152 ? 19 1 1 B C 36 1_555 B G 47 1_555 0.398 -0.270 -0.192 8.271 -13.297 3.085 22 B_C2140:G2151_B B 2140 ? B 2151 ? 19 1 1 B G 37 1_555 B U 46 1_555 -2.238 -0.580 0.249 3.064 -13.074 0.284 23 B_G2141:U2150_B B 2141 ? B 2150 ? 28 1 1 B C 38 1_555 B G 45 1_555 0.374 -0.169 -0.059 7.452 -13.699 0.480 24 B_C2142:G2149_B B 2142 ? B 2149 ? 19 1 1 B C 39 1_555 B G 44 1_555 0.239 -0.248 0.289 -2.411 -6.257 2.577 25 B_C2143:G2148_B B 2143 ? B 2148 ? 19 1 1 B C 7 1_555 B G 43 1_555 -0.322 3.146 0.440 -6.176 21.000 -70.346 26 B_C2111:G2147_B B 2111 ? B 2147 ? ? ? 1 B G 8 1_555 B A 65 1_555 -3.428 5.165 -0.390 -27.166 -6.895 -164.166 27 B_G2112:A2169_B B 2112 ? B 2169 ? ? 3 1 B U 9 1_555 B A 66 1_555 -0.664 4.282 -0.482 -20.994 4.328 -160.286 28 B_U2113:A2170_B B 2113 ? B 2170 ? ? ? 1 B A 15 1_555 B G 64 1_555 -3.073 4.196 0.417 -29.374 -5.277 71.989 29 B_A2119:G2168_B B 2119 ? B 2168 ? 10 6 1 B A 67 1_555 B U 63 1_555 -4.191 -2.357 0.449 -6.439 6.231 -91.600 30 B_A2171:U2167_B B 2171 ? B 2167 ? 24 4 1 B U 68 1_555 B A 13 1_555 0.084 -0.078 -0.249 -2.858 -6.361 1.166 31 B_U2172:A2117_B B 2172 ? B 2117 ? 20 1 1 B G 62 1_555 B G 12 1_555 3.998 3.731 2.452 -1.982 -14.881 -51.346 32 B_G2166:G2116_B B 2166 ? B 2116 ? ? ? 1 B C 24 1_555 B G 56 1_555 0.108 -0.166 -0.165 -1.590 -4.715 -0.090 33 B_C2128:G2160_B B 2128 ? B 2160 ? 19 1 1 B C 25 1_555 B G 55 1_555 0.347 -0.263 -0.219 2.523 0.394 2.556 34 B_C2129:G2159_B B 2129 ? B 2159 ? 19 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 'SULFATE ION' SO4 5 'SODIUM ION' NA 6 'MAGNESIUM ION' MG 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3U4M _pdbx_initial_refinement_model.details 'PDB ENTRY 3U4M' #