HEADER IMMUNE SYSTEM 07-DEC-11 3UZQ TITLE CRYSTAL STRUCTURE OF THE DENGUE VIRUS SEROTYPE 1 ENVELOPE PROTEIN TITLE 2 DOMAIN III IN COMPLEX WITH THE VARIABLE DOMAINS OF MAB 4E11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-DENGUE MAB 4E11; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SINGLE CHAIN VARIABLE FRAGMENT; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ENVELOPE PROTEIN; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: DOMAIN III (UNP RESIDUES 576-680); COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HB2151; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PHAGEMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PLB1; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: DENGUE VIRUS 1; SOURCE 12 ORGANISM_TAXID: 11053; SOURCE 13 STRAIN: GUIANA/FGA89/1989; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET20B KEYWDS DENGUE ANTIBODY NEUTRALIZATION, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.J.B.COCKBURN,M.E.NAVARRO SANCHEZ,N.FRETES,A.URVOAS,I.STAROPOLI, AUTHOR 2 C.M.KIKUTI,L.L.COFFEY,F.ARENZANA SEISDEDOS,H.BEDOUELLE,F.A.REY REVDAT 3 13-SEP-23 3UZQ 1 REMARK SEQADV REVDAT 2 18-APR-12 3UZQ 1 JRNL REVDAT 1 22-FEB-12 3UZQ 0 JRNL AUTH J.J.COCKBURN,M.E.NAVARRO SANCHEZ,N.FRETES,A.URVOAS, JRNL AUTH 2 I.STAROPOLI,C.M.KIKUTI,L.L.COFFEY,F.ARENZANA SEISDEDOS, JRNL AUTH 3 H.BEDOUELLE,F.A.REY JRNL TITL MECHANISM OF DENGUE VIRUS BROAD CROSS-NEUTRALIZATION BY A JRNL TITL 2 MONOCLONAL ANTIBODY. JRNL REF STRUCTURE V. 20 303 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22285214 JRNL DOI 10.1016/J.STR.2012.01.001 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.9.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 54125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2755 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.64 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.49 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3974 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2216 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3761 REMARK 3 BIN R VALUE (WORKING SET) : 0.2206 REMARK 3 BIN FREE R VALUE : 0.2383 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.36 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 213 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2516 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 304 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.55440 REMARK 3 B22 (A**2) : -1.55440 REMARK 3 B33 (A**2) : 3.10890 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.191 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.074 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2671 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3620 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 931 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 61 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 395 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2671 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 351 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3254 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 0.95 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.20 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.97 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|3 - A|124 } REMARK 3 ORIGIN FOR THE GROUP (A): 29.6302 29.1077 2.8050 REMARK 3 T TENSOR REMARK 3 T11: -0.0330 T22: -0.0137 REMARK 3 T33: -0.0189 T12: 0.0103 REMARK 3 T13: -0.0101 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.2170 L22: 0.7207 REMARK 3 L33: 1.2328 L12: -0.3799 REMARK 3 L13: -0.0925 L23: -0.0444 REMARK 3 S TENSOR REMARK 3 S11: 0.0308 S12: -0.0758 S13: 0.0087 REMARK 3 S21: 0.0382 S22: 0.0635 S23: -0.0236 REMARK 3 S31: 0.0370 S32: 0.0765 S33: -0.0943 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|134 - A|245 } REMARK 3 ORIGIN FOR THE GROUP (A): 41.0086 10.8266 -1.5414 REMARK 3 T TENSOR REMARK 3 T11: -0.0089 T22: -0.0693 REMARK 3 T33: -0.0146 T12: 0.0452 REMARK 3 T13: -0.0510 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 2.1295 L22: 0.8464 REMARK 3 L33: 1.9445 L12: -0.5465 REMARK 3 L13: 1.0320 L23: -0.4292 REMARK 3 S TENSOR REMARK 3 S11: 0.1612 S12: 0.0386 S13: -0.2462 REMARK 3 S21: -0.1342 S22: -0.0461 S23: 0.0458 REMARK 3 S31: 0.2407 S32: 0.1148 S33: -0.1151 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { B|299 - B|393 } REMARK 3 ORIGIN FOR THE GROUP (A): 35.5761 20.7346 -25.9274 REMARK 3 T TENSOR REMARK 3 T11: -0.0220 T22: -0.0207 REMARK 3 T33: -0.1851 T12: 0.1189 REMARK 3 T13: 0.0011 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 2.9801 L22: 2.2170 REMARK 3 L33: 4.2647 L12: 0.2064 REMARK 3 L13: -0.1538 L23: -0.4365 REMARK 3 S TENSOR REMARK 3 S11: 0.1242 S12: 0.4507 S13: 0.0772 REMARK 3 S21: -0.4767 S22: -0.0468 S23: -0.0998 REMARK 3 S31: 0.3208 S32: 0.1765 S33: -0.0774 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UZQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000069412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI(111) REMARK 200 OPTICS : DYNAMICALLY BENDABLE MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54184 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 47.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.50700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OAN, 1DZB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 4K, 0.1M MES, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.44000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.88000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 38.88000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 19.44000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 444 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 VAL A 2 REMARK 465 GLY A 125 REMARK 465 GLY A 126 REMARK 465 SER A 127 REMARK 465 GLY A 128 REMARK 465 GLY A 129 REMARK 465 GLY A 130 REMARK 465 GLY A 131 REMARK 465 SER A 132 REMARK 465 GLU A 133 REMARK 465 LEU A 246 REMARK 465 GLU A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 465 HIS A 250 REMARK 465 HIS A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 465 MET B 295 REMARK 465 GLY B 296 REMARK 465 MET B 297 REMARK 465 SER B 298 REMARK 465 LYS B 394 REMARK 465 GLY B 395 REMARK 465 SER B 396 REMARK 465 SER B 397 REMARK 465 ILE B 398 REMARK 465 GLY B 399 REMARK 465 LYS B 400 REMARK 465 LEU B 401 REMARK 465 GLU B 402 REMARK 465 HIS B 403 REMARK 465 HIS B 404 REMARK 465 HIS B 405 REMARK 465 HIS B 406 REMARK 465 HIS B 407 REMARK 465 HIS B 408 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU B 342 CG CD OE1 OE2 REMARK 480 LYS B 343 CG CD CE NZ REMARK 480 VAL B 345 CG1 CG2 REMARK 480 GLU B 375 CG CD OE1 OE2 REMARK 480 GLU B 384 CG CD OE1 OE2 REMARK 480 LYS B 385 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 86 61.32 37.79 REMARK 500 ALA A 187 -40.57 66.07 REMARK 500 ARG A 204 -80.63 62.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 310 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UYP RELATED DB: PDB REMARK 900 RELATED ID: 3UZE RELATED DB: PDB REMARK 900 RELATED ID: 3UZV RELATED DB: PDB DBREF 3UZQ A 1 253 PDB 3UZQ 3UZQ 1 253 DBREF 3UZQ B 296 400 UNP Q9II01 Q9II01_9FLAV 576 680 SEQADV 3UZQ MET B 295 UNP Q9II01 EXPRESSION TAG SEQADV 3UZQ LEU B 401 UNP Q9II01 EXPRESSION TAG SEQADV 3UZQ GLU B 402 UNP Q9II01 EXPRESSION TAG SEQADV 3UZQ HIS B 403 UNP Q9II01 EXPRESSION TAG SEQADV 3UZQ HIS B 404 UNP Q9II01 EXPRESSION TAG SEQADV 3UZQ HIS B 405 UNP Q9II01 EXPRESSION TAG SEQADV 3UZQ HIS B 406 UNP Q9II01 EXPRESSION TAG SEQADV 3UZQ HIS B 407 UNP Q9II01 EXPRESSION TAG SEQADV 3UZQ HIS B 408 UNP Q9II01 EXPRESSION TAG SEQRES 1 A 253 GLU VAL LYS LEU LEU GLU GLN SER GLY ALA GLU LEU VAL SEQRES 2 A 253 LYS PRO GLY ALA SER VAL ARG LEU SER CYS THR ALA SER SEQRES 3 A 253 GLY PHE ASN ILE LYS ASP THR TYR MET SER TRP VAL LYS SEQRES 4 A 253 GLN ARG PRO GLU GLN GLY LEU GLU TRP ILE GLY ARG ILE SEQRES 5 A 253 ASP PRO ALA ASN GLY ASP THR LYS TYR ASP PRO LYS PHE SEQRES 6 A 253 GLN GLY LYS ALA THR ILE THR ALA ASP THR SER SER ASN SEQRES 7 A 253 THR ALA TYR LEU HIS LEU SER SER LEU THR SER GLY ASP SEQRES 8 A 253 THR ALA VAL TYR TYR CYS SER ARG GLY TRP GLU GLY PHE SEQRES 9 A 253 ALA TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER ALA SEQRES 10 A 253 GLY GLY GLY GLY SER GLY GLY GLY GLY SER GLY GLY GLY SEQRES 11 A 253 GLY SER GLU LEU VAL MET THR GLN THR PRO ALA SER LEU SEQRES 12 A 253 ALA VAL SER LEU GLY GLN ARG ALA THR ILE SER CYS ARG SEQRES 13 A 253 ALA SER GLU ASN VAL ASP ARG TYR GLY ASN SER PHE MET SEQRES 14 A 253 HIS TRP TYR GLN GLN LYS ALA GLY GLN PRO PRO LYS LEU SEQRES 15 A 253 LEU ILE TYR ARG ALA SER ASN LEU GLU SER GLY ILE PRO SEQRES 16 A 253 ALA ARG PHE SER GLY SER GLY SER ARG THR ASP PHE THR SEQRES 17 A 253 LEU THR ILE ASN PRO VAL GLU ALA ASP ASP VAL ALA THR SEQRES 18 A 253 TYR PHE CYS GLN ARG SER ASN GLU VAL PRO TRP THR PHE SEQRES 19 A 253 GLY GLY GLY THR LYS LEU GLU ILE LYS ARG PRO LEU GLU SEQRES 20 A 253 HIS HIS HIS HIS HIS HIS SEQRES 1 B 114 MET GLY MET SER TYR VAL MET CYS THR GLY SER PHE LYS SEQRES 2 B 114 LEU GLU LYS GLU VAL ALA GLU THR GLN HIS GLY THR VAL SEQRES 3 B 114 LEU VAL GLN VAL LYS TYR GLU GLY THR ASP ALA PRO CYS SEQRES 4 B 114 LYS ILE PRO PHE SER THR GLN ASP GLU LYS GLY VAL THR SEQRES 5 B 114 GLN ASN GLY ARG LEU ILE THR ALA ASN PRO ILE VAL THR SEQRES 6 B 114 ASP LYS GLU LYS PRO VAL ASN ILE GLU THR GLU PRO PRO SEQRES 7 B 114 PHE GLY GLU SER TYR ILE ILE VAL GLY ALA GLY GLU LYS SEQRES 8 B 114 ALA LEU LYS LEU SER TRP PHE LYS LYS GLY SER SER ILE SEQRES 9 B 114 GLY LYS LEU GLU HIS HIS HIS HIS HIS HIS HET GOL A 301 6 HET EDO A 302 4 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET EDO A 307 4 HET MES A 308 12 HET EDO A 309 4 HET EDO A 310 4 HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 EDO 8(C2 H6 O2) FORMUL 10 MES C6 H13 N O4 S FORMUL 13 HOH *304(H2 O) HELIX 1 1 ASN A 29 THR A 33 5 5 HELIX 2 2 PRO A 63 GLN A 66 5 4 HELIX 3 3 THR A 88 THR A 92 5 5 HELIX 4 4 GLU A 215 VAL A 219 5 5 SHEET 1 A 4 LEU A 5 GLN A 7 0 SHEET 2 A 4 VAL A 19 ALA A 25 -1 O THR A 24 N GLU A 6 SHEET 3 A 4 THR A 79 LEU A 84 -1 O LEU A 84 N VAL A 19 SHEET 4 A 4 ALA A 69 ASP A 74 -1 N THR A 72 O TYR A 81 SHEET 1 B 6 GLU A 11 VAL A 13 0 SHEET 2 B 6 THR A 111 VAL A 115 1 O THR A 114 N GLU A 11 SHEET 3 B 6 ALA A 93 ARG A 99 -1 N ALA A 93 O VAL A 113 SHEET 4 B 6 MET A 35 GLN A 40 -1 N VAL A 38 O TYR A 96 SHEET 5 B 6 LEU A 46 ILE A 52 -1 O GLU A 47 N LYS A 39 SHEET 6 B 6 THR A 59 TYR A 61 -1 O LYS A 60 N ARG A 51 SHEET 1 C 4 GLU A 11 VAL A 13 0 SHEET 2 C 4 THR A 111 VAL A 115 1 O THR A 114 N GLU A 11 SHEET 3 C 4 ALA A 93 ARG A 99 -1 N ALA A 93 O VAL A 113 SHEET 4 C 4 TYR A 106 TRP A 107 -1 O TYR A 106 N ARG A 99 SHEET 1 D 4 MET A 136 THR A 139 0 SHEET 2 D 4 ALA A 151 ALA A 157 -1 O ARG A 156 N THR A 137 SHEET 3 D 4 ASP A 206 ILE A 211 -1 O ILE A 211 N ALA A 151 SHEET 4 D 4 PHE A 198 SER A 203 -1 N SER A 199 O THR A 210 SHEET 1 E 6 SER A 142 VAL A 145 0 SHEET 2 E 6 THR A 238 ILE A 242 1 O GLU A 241 N VAL A 145 SHEET 3 E 6 ALA A 220 ARG A 226 -1 N ALA A 220 O LEU A 240 SHEET 4 E 6 MET A 169 GLN A 174 -1 N HIS A 170 O GLN A 225 SHEET 5 E 6 LYS A 181 TYR A 185 -1 O LEU A 183 N TRP A 171 SHEET 6 E 6 ASN A 189 LEU A 190 -1 O ASN A 189 N TYR A 185 SHEET 1 F 2 ASP A 162 ARG A 163 0 SHEET 2 F 2 ASN A 166 SER A 167 -1 O ASN A 166 N ARG A 163 SHEET 1 G 3 PHE B 306 LEU B 308 0 SHEET 2 G 3 VAL B 320 TYR B 326 -1 O LYS B 325 N LYS B 307 SHEET 3 G 3 ALA B 313 GLU B 314 -1 N ALA B 313 O LEU B 321 SHEET 1 H 3 PHE B 306 LEU B 308 0 SHEET 2 H 3 VAL B 320 TYR B 326 -1 O LYS B 325 N LYS B 307 SHEET 3 H 3 VAL B 365 THR B 369 -1 O ILE B 367 N VAL B 322 SHEET 1 I 2 CYS B 333 LYS B 334 0 SHEET 2 I 2 ILE B 357 VAL B 358 -1 O VAL B 358 N CYS B 333 SHEET 1 J 4 THR B 346 GLN B 347 0 SHEET 2 J 4 PHE B 337 ASP B 341 -1 N THR B 339 O GLN B 347 SHEET 3 J 4 GLY B 374 VAL B 380 -1 O ILE B 379 N SER B 338 SHEET 4 J 4 LEU B 387 LYS B 393 -1 O TRP B 391 N SER B 376 SSBOND 1 CYS A 23 CYS A 97 1555 1555 2.04 SSBOND 2 CYS A 155 CYS A 224 1555 1555 2.01 SSBOND 3 CYS B 302 CYS B 333 1555 1555 2.04 CISPEP 1 THR A 139 PRO A 140 0 -5.24 CISPEP 2 ASN A 212 PRO A 213 0 -3.49 CISPEP 3 VAL A 230 PRO A 231 0 1.04 CISPEP 4 ALA B 331 PRO B 332 0 1.96 SITE 1 AC1 7 GLN A 173 LYS A 181 ILE A 194 PRO A 195 SITE 2 AC1 7 PHE A 198 ASP A 217 ASP A 218 SITE 1 AC2 6 ARG A 20 ALA A 73 ASP A 74 THR A 75 SITE 2 AC2 6 EDO A 309 HOH A 529 SITE 1 AC3 2 ARG A 20 SER A 22 SITE 1 AC4 4 TYR A 34 ASP A 53 ASN A 56 HOH A 530 SITE 1 AC5 3 ALA A 141 GLY A 236 GLY A 237 SITE 1 AC6 4 ALA A 144 ILE A 242 LYS A 243 ARG A 244 SITE 1 AC7 4 VAL A 94 GLN A 109 GLY A 110 HOH A 480 SITE 1 AC8 8 ARG A 20 THR A 72 ASP A 74 TYR A 81 SITE 2 AC8 8 HIS A 83 PRO A 245 HOH A 404 HOH A 498 SITE 1 AC9 9 SER A 18 ILE A 52 PRO A 54 GLY A 57 SITE 2 AC9 9 ALA A 73 EDO A 302 HOH A 439 HOH A 475 SITE 3 AC9 9 HOH A 529 SITE 1 BC1 4 ALA A 17 SER A 18 ALA A 55 THR A 75 CRYST1 110.710 110.710 58.320 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009033 0.005215 0.000000 0.00000 SCALE2 0.000000 0.010430 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017147 0.00000