data_3V1O # _entry.id 3V1O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3V1O pdb_00003v1o 10.2210/pdb3v1o/pdb RCSB RCSB069482 ? ? WWPDB D_1000069482 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-14 2 'Structure model' 1 1 2012-03-28 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3V1O _pdbx_database_status.recvd_initial_deposition_date 2011-12-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3V1Q . unspecified PDB 3V1R . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhou, D.' 1 'Wlodawer, A.' 2 # _citation.id primary _citation.title 'Crystal structures of the reverse transcriptase-associated ribonuclease H domain of xenotropic murine leukemia-virus related virus.' _citation.journal_abbrev J.Struct.Biol. _citation.journal_volume 177 _citation.page_first 638 _citation.page_last 645 _citation.year 2012 _citation.journal_id_ASTM JSBIEM _citation.country US _citation.journal_id_ISSN 1047-8477 _citation.journal_id_CSD 0803 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22366278 _citation.pdbx_database_id_DOI 10.1016/j.jsb.2012.02.006 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhou, D.' 1 ? primary 'Chung, S.' 2 ? primary 'Miller, M.' 3 ? primary 'Le Grice, S.F.' 4 ? primary 'Wlodawer, A.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Reverse transcriptase/ribonuclease H p80' 19874.469 1 3.1.26.4 ? 'RNase H domain (UNP residues 1154-1328)' ? 2 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 3 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 71 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DRWGSEILAETHGTRPDLTDQPIPDADYTWYTDGSSFLQEGQRRAGAAVTTETEVIWARALPAGTSAQRAELIALTQALK MAEGKKLNVYTDSRYAFATAHVHGEIYRRRGLLTSEGREIKNKNEILALLKALFLPKRLSIIHCPGHQKGNSAEARGNRM ADQAAREAAMKAVLETSTLL ; _entity_poly.pdbx_seq_one_letter_code_can ;DRWGSEILAETHGTRPDLTDQPIPDADYTWYTDGSSFLQEGQRRAGAAVTTETEVIWARALPAGTSAQRAELIALTQALK MAEGKKLNVYTDSRYAFATAHVHGEIYRRRGLLTSEGREIKNKNEILALLKALFLPKRLSIIHCPGHQKGNSAEARGNRM ADQAAREAAMKAVLETSTLL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 4 GLYCEROL GOL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ARG n 1 3 TRP n 1 4 GLY n 1 5 SER n 1 6 GLU n 1 7 ILE n 1 8 LEU n 1 9 ALA n 1 10 GLU n 1 11 THR n 1 12 HIS n 1 13 GLY n 1 14 THR n 1 15 ARG n 1 16 PRO n 1 17 ASP n 1 18 LEU n 1 19 THR n 1 20 ASP n 1 21 GLN n 1 22 PRO n 1 23 ILE n 1 24 PRO n 1 25 ASP n 1 26 ALA n 1 27 ASP n 1 28 TYR n 1 29 THR n 1 30 TRP n 1 31 TYR n 1 32 THR n 1 33 ASP n 1 34 GLY n 1 35 SER n 1 36 SER n 1 37 PHE n 1 38 LEU n 1 39 GLN n 1 40 GLU n 1 41 GLY n 1 42 GLN n 1 43 ARG n 1 44 ARG n 1 45 ALA n 1 46 GLY n 1 47 ALA n 1 48 ALA n 1 49 VAL n 1 50 THR n 1 51 THR n 1 52 GLU n 1 53 THR n 1 54 GLU n 1 55 VAL n 1 56 ILE n 1 57 TRP n 1 58 ALA n 1 59 ARG n 1 60 ALA n 1 61 LEU n 1 62 PRO n 1 63 ALA n 1 64 GLY n 1 65 THR n 1 66 SER n 1 67 ALA n 1 68 GLN n 1 69 ARG n 1 70 ALA n 1 71 GLU n 1 72 LEU n 1 73 ILE n 1 74 ALA n 1 75 LEU n 1 76 THR n 1 77 GLN n 1 78 ALA n 1 79 LEU n 1 80 LYS n 1 81 MET n 1 82 ALA n 1 83 GLU n 1 84 GLY n 1 85 LYS n 1 86 LYS n 1 87 LEU n 1 88 ASN n 1 89 VAL n 1 90 TYR n 1 91 THR n 1 92 ASP n 1 93 SER n 1 94 ARG n 1 95 TYR n 1 96 ALA n 1 97 PHE n 1 98 ALA n 1 99 THR n 1 100 ALA n 1 101 HIS n 1 102 VAL n 1 103 HIS n 1 104 GLY n 1 105 GLU n 1 106 ILE n 1 107 TYR n 1 108 ARG n 1 109 ARG n 1 110 ARG n 1 111 GLY n 1 112 LEU n 1 113 LEU n 1 114 THR n 1 115 SER n 1 116 GLU n 1 117 GLY n 1 118 ARG n 1 119 GLU n 1 120 ILE n 1 121 LYS n 1 122 ASN n 1 123 LYS n 1 124 ASN n 1 125 GLU n 1 126 ILE n 1 127 LEU n 1 128 ALA n 1 129 LEU n 1 130 LEU n 1 131 LYS n 1 132 ALA n 1 133 LEU n 1 134 PHE n 1 135 LEU n 1 136 PRO n 1 137 LYS n 1 138 ARG n 1 139 LEU n 1 140 SER n 1 141 ILE n 1 142 ILE n 1 143 HIS n 1 144 CYS n 1 145 PRO n 1 146 GLY n 1 147 HIS n 1 148 GLN n 1 149 LYS n 1 150 GLY n 1 151 ASN n 1 152 SER n 1 153 ALA n 1 154 GLU n 1 155 ALA n 1 156 ARG n 1 157 GLY n 1 158 ASN n 1 159 ARG n 1 160 MET n 1 161 ALA n 1 162 ASP n 1 163 GLN n 1 164 ALA n 1 165 ALA n 1 166 ARG n 1 167 GLU n 1 168 ALA n 1 169 ALA n 1 170 MET n 1 171 LYS n 1 172 ALA n 1 173 VAL n 1 174 LEU n 1 175 GLU n 1 176 THR n 1 177 SER n 1 178 THR n 1 179 LEU n 1 180 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name XMRV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'gag-pol, POL_XMRV3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Xenotropic MuLV-related virus VP35' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 356663 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 492 ? ? ? A . n A 1 2 ARG 2 493 ? ? ? A . n A 1 3 TRP 3 494 ? ? ? A . n A 1 4 GLY 4 495 ? ? ? A . n A 1 5 SER 5 496 ? ? ? A . n A 1 6 GLU 6 497 ? ? ? A . n A 1 7 ILE 7 498 ? ? ? A . n A 1 8 LEU 8 499 ? ? ? A . n A 1 9 ALA 9 500 ? ? ? A . n A 1 10 GLU 10 501 ? ? ? A . n A 1 11 THR 11 502 ? ? ? A . n A 1 12 HIS 12 503 503 HIS HIS A . n A 1 13 GLY 13 504 504 GLY GLY A . n A 1 14 THR 14 505 505 THR THR A . n A 1 15 ARG 15 506 506 ARG ARG A . n A 1 16 PRO 16 507 507 PRO PRO A . n A 1 17 ASP 17 508 508 ASP ASP A . n A 1 18 LEU 18 509 509 LEU LEU A . n A 1 19 THR 19 510 510 THR THR A . n A 1 20 ASP 20 511 511 ASP ASP A . n A 1 21 GLN 21 512 512 GLN GLN A . n A 1 22 PRO 22 513 513 PRO PRO A . n A 1 23 ILE 23 514 514 ILE ILE A . n A 1 24 PRO 24 515 515 PRO PRO A . n A 1 25 ASP 25 516 516 ASP ASP A . n A 1 26 ALA 26 517 517 ALA ALA A . n A 1 27 ASP 27 518 518 ASP ASP A . n A 1 28 TYR 28 519 519 TYR TYR A . n A 1 29 THR 29 520 520 THR THR A . n A 1 30 TRP 30 521 521 TRP TRP A . n A 1 31 TYR 31 522 522 TYR TYR A . n A 1 32 THR 32 523 523 THR THR A . n A 1 33 ASP 33 524 524 ASP ASP A . n A 1 34 GLY 34 525 525 GLY GLY A . n A 1 35 SER 35 526 526 SER SER A . n A 1 36 SER 36 527 527 SER SER A . n A 1 37 PHE 37 528 528 PHE PHE A . n A 1 38 LEU 38 529 529 LEU LEU A . n A 1 39 GLN 39 530 530 GLN GLN A . n A 1 40 GLU 40 531 531 GLU GLU A . n A 1 41 GLY 41 532 532 GLY GLY A . n A 1 42 GLN 42 533 533 GLN GLN A . n A 1 43 ARG 43 534 534 ARG ARG A . n A 1 44 ARG 44 535 535 ARG ARG A . n A 1 45 ALA 45 536 536 ALA ALA A . n A 1 46 GLY 46 537 537 GLY GLY A . n A 1 47 ALA 47 538 538 ALA ALA A . n A 1 48 ALA 48 539 539 ALA ALA A . n A 1 49 VAL 49 540 540 VAL VAL A . n A 1 50 THR 50 541 541 THR THR A . n A 1 51 THR 51 542 542 THR THR A . n A 1 52 GLU 52 543 543 GLU GLU A . n A 1 53 THR 53 544 544 THR THR A . n A 1 54 GLU 54 545 545 GLU GLU A . n A 1 55 VAL 55 546 546 VAL VAL A . n A 1 56 ILE 56 547 547 ILE ILE A . n A 1 57 TRP 57 548 548 TRP TRP A . n A 1 58 ALA 58 549 549 ALA ALA A . n A 1 59 ARG 59 550 550 ARG ARG A . n A 1 60 ALA 60 551 551 ALA ALA A . n A 1 61 LEU 61 552 552 LEU LEU A . n A 1 62 PRO 62 553 553 PRO PRO A . n A 1 63 ALA 63 554 554 ALA ALA A . n A 1 64 GLY 64 555 555 GLY GLY A . n A 1 65 THR 65 556 556 THR THR A . n A 1 66 SER 66 557 557 SER SER A . n A 1 67 ALA 67 558 558 ALA ALA A . n A 1 68 GLN 68 559 559 GLN GLN A . n A 1 69 ARG 69 560 560 ARG ARG A . n A 1 70 ALA 70 561 561 ALA ALA A . n A 1 71 GLU 71 562 562 GLU GLU A . n A 1 72 LEU 72 563 563 LEU LEU A . n A 1 73 ILE 73 564 564 ILE ILE A . n A 1 74 ALA 74 565 565 ALA ALA A . n A 1 75 LEU 75 566 566 LEU LEU A . n A 1 76 THR 76 567 567 THR THR A . n A 1 77 GLN 77 568 568 GLN GLN A . n A 1 78 ALA 78 569 569 ALA ALA A . n A 1 79 LEU 79 570 570 LEU LEU A . n A 1 80 LYS 80 571 571 LYS LYS A . n A 1 81 MET 81 572 572 MET MET A . n A 1 82 ALA 82 573 573 ALA ALA A . n A 1 83 GLU 83 574 574 GLU GLU A . n A 1 84 GLY 84 575 575 GLY GLY A . n A 1 85 LYS 85 576 576 LYS LYS A . n A 1 86 LYS 86 577 577 LYS LYS A . n A 1 87 LEU 87 578 578 LEU LEU A . n A 1 88 ASN 88 579 579 ASN ASN A . n A 1 89 VAL 89 580 580 VAL VAL A . n A 1 90 TYR 90 581 581 TYR TYR A . n A 1 91 THR 91 582 582 THR THR A . n A 1 92 ASP 92 583 583 ASP ASP A . n A 1 93 SER 93 584 584 SER SER A . n A 1 94 ARG 94 585 585 ARG ARG A . n A 1 95 TYR 95 586 586 TYR TYR A . n A 1 96 ALA 96 587 587 ALA ALA A . n A 1 97 PHE 97 588 588 PHE PHE A . n A 1 98 ALA 98 589 589 ALA ALA A . n A 1 99 THR 99 590 590 THR THR A . n A 1 100 ALA 100 591 591 ALA ALA A . n A 1 101 HIS 101 592 592 HIS HIS A . n A 1 102 VAL 102 593 593 VAL VAL A . n A 1 103 HIS 103 594 594 HIS HIS A . n A 1 104 GLY 104 595 595 GLY GLY A . n A 1 105 GLU 105 596 596 GLU GLU A . n A 1 106 ILE 106 597 597 ILE ILE A . n A 1 107 TYR 107 598 598 TYR TYR A . n A 1 108 ARG 108 599 599 ARG ARG A . n A 1 109 ARG 109 600 600 ARG ARG A . n A 1 110 ARG 110 601 601 ARG ARG A . n A 1 111 GLY 111 602 602 GLY GLY A . n A 1 112 LEU 112 603 603 LEU LEU A . n A 1 113 LEU 113 604 604 LEU LEU A . n A 1 114 THR 114 605 605 THR THR A . n A 1 115 SER 115 606 606 SER SER A . n A 1 116 GLU 116 607 607 GLU GLU A . n A 1 117 GLY 117 608 608 GLY GLY A . n A 1 118 ARG 118 609 609 ARG ARG A . n A 1 119 GLU 119 610 610 GLU GLU A . n A 1 120 ILE 120 611 611 ILE ILE A . n A 1 121 LYS 121 612 612 LYS LYS A . n A 1 122 ASN 122 613 613 ASN ASN A . n A 1 123 LYS 123 614 614 LYS LYS A . n A 1 124 ASN 124 615 615 ASN ASN A . n A 1 125 GLU 125 616 616 GLU GLU A . n A 1 126 ILE 126 617 617 ILE ILE A . n A 1 127 LEU 127 618 618 LEU LEU A . n A 1 128 ALA 128 619 619 ALA ALA A . n A 1 129 LEU 129 620 620 LEU LEU A . n A 1 130 LEU 130 621 621 LEU LEU A . n A 1 131 LYS 131 622 622 LYS LYS A . n A 1 132 ALA 132 623 623 ALA ALA A . n A 1 133 LEU 133 624 624 LEU LEU A . n A 1 134 PHE 134 625 625 PHE PHE A . n A 1 135 LEU 135 626 626 LEU LEU A . n A 1 136 PRO 136 627 627 PRO PRO A . n A 1 137 LYS 137 628 628 LYS LYS A . n A 1 138 ARG 138 629 629 ARG ARG A . n A 1 139 LEU 139 630 630 LEU LEU A . n A 1 140 SER 140 631 631 SER SER A . n A 1 141 ILE 141 632 632 ILE ILE A . n A 1 142 ILE 142 633 633 ILE ILE A . n A 1 143 HIS 143 634 634 HIS HIS A . n A 1 144 CYS 144 635 635 CYS CYS A . n A 1 145 PRO 145 636 636 PRO PRO A . n A 1 146 GLY 146 637 637 GLY GLY A . n A 1 147 HIS 147 638 638 HIS HIS A . n A 1 148 GLN 148 639 639 GLN GLN A . n A 1 149 LYS 149 640 640 LYS LYS A . n A 1 150 GLY 150 641 641 GLY GLY A . n A 1 151 ASN 151 642 642 ASN ASN A . n A 1 152 SER 152 643 643 SER SER A . n A 1 153 ALA 153 644 644 ALA ALA A . n A 1 154 GLU 154 645 645 GLU GLU A . n A 1 155 ALA 155 646 646 ALA ALA A . n A 1 156 ARG 156 647 647 ARG ARG A . n A 1 157 GLY 157 648 648 GLY GLY A . n A 1 158 ASN 158 649 649 ASN ASN A . n A 1 159 ARG 159 650 650 ARG ARG A . n A 1 160 MET 160 651 651 MET MET A . n A 1 161 ALA 161 652 652 ALA ALA A . n A 1 162 ASP 162 653 653 ASP ASP A . n A 1 163 GLN 163 654 654 GLN GLN A . n A 1 164 ALA 164 655 655 ALA ALA A . n A 1 165 ALA 165 656 656 ALA ALA A . n A 1 166 ARG 166 657 657 ARG ARG A . n A 1 167 GLU 167 658 658 GLU GLU A . n A 1 168 ALA 168 659 659 ALA ALA A . n A 1 169 ALA 169 660 660 ALA ALA A . n A 1 170 MET 170 661 661 MET MET A . n A 1 171 LYS 171 662 662 LYS LYS A . n A 1 172 ALA 172 663 663 ALA ALA A . n A 1 173 VAL 173 664 664 VAL VAL A . n A 1 174 LEU 174 665 665 LEU LEU A . n A 1 175 GLU 175 666 666 GLU GLU A . n A 1 176 THR 176 667 667 THR THR A . n A 1 177 SER 177 668 ? ? ? A . n A 1 178 THR 178 669 ? ? ? A . n A 1 179 LEU 179 670 ? ? ? A . n A 1 180 LEU 180 671 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1 1 SO4 SO4 A . C 2 SO4 1 2 2 SO4 SO4 A . D 2 SO4 1 3 3 SO4 SO4 A . E 2 SO4 1 4 4 SO4 SO4 A . F 3 MRD 1 672 1 MRD MPD A . G 4 GOL 1 673 1 GOL GOL A . H 5 HOH 1 5 5 HOH HOH A . H 5 HOH 2 6 6 HOH HOH A . H 5 HOH 3 7 7 HOH HOH A . H 5 HOH 4 8 8 HOH HOH A . H 5 HOH 5 9 9 HOH HOH A . H 5 HOH 6 10 10 HOH HOH A . H 5 HOH 7 11 11 HOH HOH A . H 5 HOH 8 12 12 HOH HOH A . H 5 HOH 9 13 13 HOH HOH A . H 5 HOH 10 14 14 HOH HOH A . H 5 HOH 11 15 15 HOH HOH A . H 5 HOH 12 16 16 HOH HOH A . H 5 HOH 13 17 17 HOH HOH A . H 5 HOH 14 18 18 HOH HOH A . H 5 HOH 15 19 19 HOH HOH A . H 5 HOH 16 20 20 HOH HOH A . H 5 HOH 17 21 21 HOH HOH A . H 5 HOH 18 22 22 HOH HOH A . H 5 HOH 19 23 23 HOH HOH A . H 5 HOH 20 24 24 HOH HOH A . H 5 HOH 21 25 25 HOH HOH A . H 5 HOH 22 26 26 HOH HOH A . H 5 HOH 23 27 27 HOH HOH A . H 5 HOH 24 28 28 HOH HOH A . H 5 HOH 25 29 29 HOH HOH A . H 5 HOH 26 30 30 HOH HOH A . H 5 HOH 27 31 31 HOH HOH A . H 5 HOH 28 32 32 HOH HOH A . H 5 HOH 29 33 33 HOH HOH A . H 5 HOH 30 34 34 HOH HOH A . H 5 HOH 31 35 35 HOH HOH A . H 5 HOH 32 36 36 HOH HOH A . H 5 HOH 33 37 37 HOH HOH A . H 5 HOH 34 38 38 HOH HOH A . H 5 HOH 35 39 39 HOH HOH A . H 5 HOH 36 40 40 HOH HOH A . H 5 HOH 37 41 41 HOH HOH A . H 5 HOH 38 42 42 HOH HOH A . H 5 HOH 39 43 43 HOH HOH A . H 5 HOH 40 44 44 HOH HOH A . H 5 HOH 41 45 45 HOH HOH A . H 5 HOH 42 46 46 HOH HOH A . H 5 HOH 43 47 47 HOH HOH A . H 5 HOH 44 48 48 HOH HOH A . H 5 HOH 45 49 49 HOH HOH A . H 5 HOH 46 50 50 HOH HOH A . H 5 HOH 47 51 51 HOH HOH A . H 5 HOH 48 52 52 HOH HOH A . H 5 HOH 49 53 53 HOH HOH A . H 5 HOH 50 54 54 HOH HOH A . H 5 HOH 51 55 55 HOH HOH A . H 5 HOH 52 56 56 HOH HOH A . H 5 HOH 53 57 57 HOH HOH A . H 5 HOH 54 58 58 HOH HOH A . H 5 HOH 55 59 59 HOH HOH A . H 5 HOH 56 60 60 HOH HOH A . H 5 HOH 57 61 61 HOH HOH A . H 5 HOH 58 62 62 HOH HOH A . H 5 HOH 59 63 63 HOH HOH A . H 5 HOH 60 64 64 HOH HOH A . H 5 HOH 61 65 65 HOH HOH A . H 5 HOH 62 66 66 HOH HOH A . H 5 HOH 63 67 67 HOH HOH A . H 5 HOH 64 68 68 HOH HOH A . H 5 HOH 65 69 69 HOH HOH A . H 5 HOH 66 70 70 HOH HOH A . H 5 HOH 67 71 71 HOH HOH A . H 5 HOH 68 674 1 HOH HOH A . H 5 HOH 69 675 2 HOH HOH A . H 5 HOH 70 676 3 HOH HOH A . H 5 HOH 71 677 4 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 PHASES phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.1_743)' ? 3 HKL-3000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _cell.entry_id 3V1O _cell.length_a 53.290 _cell.length_b 84.219 _cell.length_c 70.525 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3V1O _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3V1O _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_percent_sol 38.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;35% PEG3000, 15% MPD, 2% isopropanol, 0.2 M lithium sulfate, 0.1 M imidazole, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2011-08-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 3V1O _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 45.032 _reflns.d_resolution_high 1.876 _reflns.number_obs 11792 _reflns.number_all ? _reflns.percent_possible_obs 89.7 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.876 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 57.7 _reflns_shell.Rmerge_I_obs 0.349 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.5 _reflns_shell.pdbx_redundancy 2.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 743 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3V1O _refine.ls_number_reflns_obs 11760 _refine.ls_number_reflns_all 11792 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.763 _refine.ls_d_res_high 1.876 _refine.ls_percent_reflns_obs 88.12 _refine.ls_R_factor_obs 0.1761 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1728 _refine.ls_R_factor_R_free 0.2174 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 6.93 _refine.ls_number_reflns_R_free 815 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -10.8920 _refine.aniso_B[2][2] 22.1371 _refine.aniso_B[3][3] -11.2451 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.400 _refine.solvent_model_param_bsol 63.374 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.72 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.50 _refine.pdbx_overall_phase_error 26.62 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1278 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 71 _refine_hist.number_atoms_total 1383 _refine_hist.d_res_high 1.876 _refine_hist.d_res_low 27.763 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.010 ? ? 1328 ? 'X-RAY DIFFRACTION' f_angle_d 1.265 ? ? 1795 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 13.734 ? ? 491 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.090 ? ? 196 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 230 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.876 1.9936 1084 0.2116 53.00 0.2526 . . 81 . . . . 'X-RAY DIFFRACTION' . 1.9936 2.1475 1643 0.1728 81.00 0.2423 . . 112 . . . . 'X-RAY DIFFRACTION' . 2.1475 2.3635 1951 0.1707 96.00 0.2449 . . 145 . . . . 'X-RAY DIFFRACTION' . 2.3635 2.7052 2052 0.1679 100.00 0.2066 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.7052 3.4073 2078 0.1625 100.00 0.2187 . . 158 . . . . 'X-RAY DIFFRACTION' . 3.4073 27.7665 2137 0.1763 99.00 0.2058 . . 179 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3V1O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3V1O _struct.title 'Crystal structures of the reverse transcriptase-associated ribonuclease H domain of xenotropic murine leukemia-virus related virus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3V1O _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Reverse Transcription, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_XMRV3 _struct_ref.pdbx_db_accession Q2F7J3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EILAETHGTRPDLTDQPIPDADYTWYTDGSSFLQEGQRRAGAAVTTETEVIWARALPAGTSAQRAELIALTQALKMAEGK KLNVYTDSRYAFATAHVHGEIYRRRGLLTSEGREIKNKNEILALLKALFLPKRLSIIHCPGHQKGNSAEARGNRMADQAA REAAMKAVLETSTLL ; _struct_ref.pdbx_align_begin 1154 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3V1O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 180 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2F7J3 _struct_ref_seq.db_align_beg 1154 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1328 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 497 _struct_ref_seq.pdbx_auth_seq_align_end 671 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3V1O ASP A 1 ? UNP Q2F7J3 ? ? 'expression tag' 492 1 1 3V1O ARG A 2 ? UNP Q2F7J3 ? ? 'expression tag' 493 2 1 3V1O TRP A 3 ? UNP Q2F7J3 ? ? 'expression tag' 494 3 1 3V1O GLY A 4 ? UNP Q2F7J3 ? ? 'expression tag' 495 4 1 3V1O SER A 5 ? UNP Q2F7J3 ? ? 'expression tag' 496 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 66 ? ALA A 82 ? SER A 557 ALA A 573 1 ? 17 HELX_P HELX_P2 2 SER A 93 ? VAL A 102 ? SER A 584 VAL A 593 1 ? 10 HELX_P HELX_P3 3 VAL A 102 ? ARG A 110 ? VAL A 593 ARG A 601 1 ? 9 HELX_P HELX_P4 4 ASN A 122 ? LEU A 133 ? ASN A 613 LEU A 624 1 ? 12 HELX_P HELX_P5 5 SER A 152 ? GLU A 175 ? SER A 643 GLU A 666 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 55 ? LEU A 61 ? VAL A 546 LEU A 552 A 2 ARG A 43 ? THR A 50 ? ARG A 534 THR A 541 A 3 TYR A 28 ? LEU A 38 ? TYR A 519 LEU A 529 A 4 LYS A 86 ? THR A 91 ? LYS A 577 THR A 582 A 5 ARG A 138 ? HIS A 143 ? ARG A 629 HIS A 634 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TRP A 57 ? O TRP A 548 N VAL A 49 ? N VAL A 540 A 2 3 O ARG A 44 ? O ARG A 535 N PHE A 37 ? N PHE A 528 A 3 4 N TYR A 28 ? N TYR A 519 O ASN A 88 ? O ASN A 579 A 4 5 N VAL A 89 ? N VAL A 580 O ILE A 142 ? O ILE A 633 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 1 ? 6 'BINDING SITE FOR RESIDUE SO4 A 1' AC2 Software A SO4 2 ? 2 'BINDING SITE FOR RESIDUE SO4 A 2' AC3 Software A SO4 3 ? 3 'BINDING SITE FOR RESIDUE SO4 A 3' AC4 Software A SO4 4 ? 6 'BINDING SITE FOR RESIDUE SO4 A 4' AC5 Software A MRD 672 ? 9 'BINDING SITE FOR RESIDUE MRD A 672' AC6 Software A GOL 673 ? 2 'BINDING SITE FOR RESIDUE GOL A 673' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLN A 68 ? GLN A 559 . ? 1_555 ? 2 AC1 6 GLU A 71 ? GLU A 562 . ? 1_555 ? 3 AC1 6 SER A 93 ? SER A 584 . ? 1_555 ? 4 AC1 6 ARG A 94 ? ARG A 585 . ? 1_555 ? 5 AC1 6 TYR A 95 ? TYR A 586 . ? 1_555 ? 6 AC1 6 LYS A 149 ? LYS A 640 . ? 4_565 ? 7 AC2 2 ARG A 43 ? ARG A 534 . ? 1_555 ? 8 AC2 2 ARG A 43 ? ARG A 534 . ? 3_555 ? 9 AC3 3 LEU A 38 ? LEU A 529 . ? 1_555 ? 10 AC3 3 ARG A 43 ? ARG A 534 . ? 1_555 ? 11 AC3 3 ARG A 159 ? ARG A 650 . ? 4_565 ? 12 AC4 6 HOH H . ? HOH A 44 . ? 6_555 ? 13 AC4 6 TYR A 31 ? TYR A 522 . ? 6_555 ? 14 AC4 6 GLU A 52 ? GLU A 543 . ? 6_555 ? 15 AC4 6 GLU A 54 ? GLU A 545 . ? 8_555 ? 16 AC4 6 ARG A 110 ? ARG A 601 . ? 1_555 ? 17 AC4 6 ALA A 153 ? ALA A 644 . ? 6_555 ? 18 AC5 9 HOH H . ? HOH A 28 . ? 1_555 ? 19 AC5 9 ARG A 69 ? ARG A 560 . ? 1_555 ? 20 AC5 9 ARG A 69 ? ARG A 560 . ? 3_555 ? 21 AC5 9 ARG A 118 ? ARG A 609 . ? 1_555 ? 22 AC5 9 ARG A 118 ? ARG A 609 . ? 3_555 ? 23 AC5 9 ILE A 120 ? ILE A 611 . ? 1_555 ? 24 AC5 9 LYS A 121 ? LYS A 612 . ? 1_555 ? 25 AC5 9 ASN A 122 ? ASN A 613 . ? 1_555 ? 26 AC5 9 LYS A 123 ? LYS A 614 . ? 1_555 ? 27 AC6 2 HOH H . ? HOH A 49 . ? 8_555 ? 28 AC6 2 MET A 81 ? MET A 572 . ? 8_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 593 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -133.99 _pdbx_validate_torsion.psi -63.67 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id SO4 _pdbx_struct_special_symmetry.auth_seq_id 2 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id SO4 _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 3.6138 _pdbx_refine_tls.origin_y 25.9261 _pdbx_refine_tls.origin_z 1.5326 _pdbx_refine_tls.T[1][1] 0.1048 _pdbx_refine_tls.T[2][2] 0.1333 _pdbx_refine_tls.T[3][3] 0.1329 _pdbx_refine_tls.T[1][2] -0.0198 _pdbx_refine_tls.T[1][3] 0.0067 _pdbx_refine_tls.T[2][3] 0.0095 _pdbx_refine_tls.L[1][1] 3.2593 _pdbx_refine_tls.L[2][2] 2.1607 _pdbx_refine_tls.L[3][3] 3.1869 _pdbx_refine_tls.L[1][2] -0.6278 _pdbx_refine_tls.L[1][3] -0.0723 _pdbx_refine_tls.L[2][3] -0.0393 _pdbx_refine_tls.S[1][1] -0.0109 _pdbx_refine_tls.S[1][2] -0.0738 _pdbx_refine_tls.S[1][3] 0.1536 _pdbx_refine_tls.S[2][1] 0.0659 _pdbx_refine_tls.S[2][2] 0.0827 _pdbx_refine_tls.S[2][3] 0.0513 _pdbx_refine_tls.S[3][1] -0.2077 _pdbx_refine_tls.S[3][2] 0.0760 _pdbx_refine_tls.S[3][3] -0.0544 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 492 ? A ASP 1 2 1 Y 1 A ARG 493 ? A ARG 2 3 1 Y 1 A TRP 494 ? A TRP 3 4 1 Y 1 A GLY 495 ? A GLY 4 5 1 Y 1 A SER 496 ? A SER 5 6 1 Y 1 A GLU 497 ? A GLU 6 7 1 Y 1 A ILE 498 ? A ILE 7 8 1 Y 1 A LEU 499 ? A LEU 8 9 1 Y 1 A ALA 500 ? A ALA 9 10 1 Y 1 A GLU 501 ? A GLU 10 11 1 Y 1 A THR 502 ? A THR 11 12 1 Y 1 A SER 668 ? A SER 177 13 1 Y 1 A THR 669 ? A THR 178 14 1 Y 1 A LEU 670 ? A LEU 179 15 1 Y 1 A LEU 671 ? A LEU 180 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 MRD C1 C N N 264 MRD C2 C N N 265 MRD O2 O N N 266 MRD CM C N N 267 MRD C3 C N N 268 MRD C4 C N R 269 MRD O4 O N N 270 MRD C5 C N N 271 MRD H1C1 H N N 272 MRD H1C2 H N N 273 MRD H1C3 H N N 274 MRD H2 H N N 275 MRD HMC1 H N N 276 MRD HMC2 H N N 277 MRD HMC3 H N N 278 MRD H3C1 H N N 279 MRD H3C2 H N N 280 MRD H4 H N N 281 MRD HA H N N 282 MRD H5C1 H N N 283 MRD H5C2 H N N 284 MRD H5C3 H N N 285 PHE N N N N 286 PHE CA C N S 287 PHE C C N N 288 PHE O O N N 289 PHE CB C N N 290 PHE CG C Y N 291 PHE CD1 C Y N 292 PHE CD2 C Y N 293 PHE CE1 C Y N 294 PHE CE2 C Y N 295 PHE CZ C Y N 296 PHE OXT O N N 297 PHE H H N N 298 PHE H2 H N N 299 PHE HA H N N 300 PHE HB2 H N N 301 PHE HB3 H N N 302 PHE HD1 H N N 303 PHE HD2 H N N 304 PHE HE1 H N N 305 PHE HE2 H N N 306 PHE HZ H N N 307 PHE HXT H N N 308 PRO N N N N 309 PRO CA C N S 310 PRO C C N N 311 PRO O O N N 312 PRO CB C N N 313 PRO CG C N N 314 PRO CD C N N 315 PRO OXT O N N 316 PRO H H N N 317 PRO HA H N N 318 PRO HB2 H N N 319 PRO HB3 H N N 320 PRO HG2 H N N 321 PRO HG3 H N N 322 PRO HD2 H N N 323 PRO HD3 H N N 324 PRO HXT H N N 325 SER N N N N 326 SER CA C N S 327 SER C C N N 328 SER O O N N 329 SER CB C N N 330 SER OG O N N 331 SER OXT O N N 332 SER H H N N 333 SER H2 H N N 334 SER HA H N N 335 SER HB2 H N N 336 SER HB3 H N N 337 SER HG H N N 338 SER HXT H N N 339 SO4 S S N N 340 SO4 O1 O N N 341 SO4 O2 O N N 342 SO4 O3 O N N 343 SO4 O4 O N N 344 THR N N N N 345 THR CA C N S 346 THR C C N N 347 THR O O N N 348 THR CB C N R 349 THR OG1 O N N 350 THR CG2 C N N 351 THR OXT O N N 352 THR H H N N 353 THR H2 H N N 354 THR HA H N N 355 THR HB H N N 356 THR HG1 H N N 357 THR HG21 H N N 358 THR HG22 H N N 359 THR HG23 H N N 360 THR HXT H N N 361 TRP N N N N 362 TRP CA C N S 363 TRP C C N N 364 TRP O O N N 365 TRP CB C N N 366 TRP CG C Y N 367 TRP CD1 C Y N 368 TRP CD2 C Y N 369 TRP NE1 N Y N 370 TRP CE2 C Y N 371 TRP CE3 C Y N 372 TRP CZ2 C Y N 373 TRP CZ3 C Y N 374 TRP CH2 C Y N 375 TRP OXT O N N 376 TRP H H N N 377 TRP H2 H N N 378 TRP HA H N N 379 TRP HB2 H N N 380 TRP HB3 H N N 381 TRP HD1 H N N 382 TRP HE1 H N N 383 TRP HE3 H N N 384 TRP HZ2 H N N 385 TRP HZ3 H N N 386 TRP HH2 H N N 387 TRP HXT H N N 388 TYR N N N N 389 TYR CA C N S 390 TYR C C N N 391 TYR O O N N 392 TYR CB C N N 393 TYR CG C Y N 394 TYR CD1 C Y N 395 TYR CD2 C Y N 396 TYR CE1 C Y N 397 TYR CE2 C Y N 398 TYR CZ C Y N 399 TYR OH O N N 400 TYR OXT O N N 401 TYR H H N N 402 TYR H2 H N N 403 TYR HA H N N 404 TYR HB2 H N N 405 TYR HB3 H N N 406 TYR HD1 H N N 407 TYR HD2 H N N 408 TYR HE1 H N N 409 TYR HE2 H N N 410 TYR HH H N N 411 TYR HXT H N N 412 VAL N N N N 413 VAL CA C N S 414 VAL C C N N 415 VAL O O N N 416 VAL CB C N N 417 VAL CG1 C N N 418 VAL CG2 C N N 419 VAL OXT O N N 420 VAL H H N N 421 VAL H2 H N N 422 VAL HA H N N 423 VAL HB H N N 424 VAL HG11 H N N 425 VAL HG12 H N N 426 VAL HG13 H N N 427 VAL HG21 H N N 428 VAL HG22 H N N 429 VAL HG23 H N N 430 VAL HXT H N N 431 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 MRD C1 C2 sing N N 250 MRD C1 H1C1 sing N N 251 MRD C1 H1C2 sing N N 252 MRD C1 H1C3 sing N N 253 MRD C2 O2 sing N N 254 MRD C2 CM sing N N 255 MRD C2 C3 sing N N 256 MRD O2 H2 sing N N 257 MRD CM HMC1 sing N N 258 MRD CM HMC2 sing N N 259 MRD CM HMC3 sing N N 260 MRD C3 C4 sing N N 261 MRD C3 H3C1 sing N N 262 MRD C3 H3C2 sing N N 263 MRD C4 O4 sing N N 264 MRD C4 C5 sing N N 265 MRD C4 H4 sing N N 266 MRD O4 HA sing N N 267 MRD C5 H5C1 sing N N 268 MRD C5 H5C2 sing N N 269 MRD C5 H5C3 sing N N 270 PHE N CA sing N N 271 PHE N H sing N N 272 PHE N H2 sing N N 273 PHE CA C sing N N 274 PHE CA CB sing N N 275 PHE CA HA sing N N 276 PHE C O doub N N 277 PHE C OXT sing N N 278 PHE CB CG sing N N 279 PHE CB HB2 sing N N 280 PHE CB HB3 sing N N 281 PHE CG CD1 doub Y N 282 PHE CG CD2 sing Y N 283 PHE CD1 CE1 sing Y N 284 PHE CD1 HD1 sing N N 285 PHE CD2 CE2 doub Y N 286 PHE CD2 HD2 sing N N 287 PHE CE1 CZ doub Y N 288 PHE CE1 HE1 sing N N 289 PHE CE2 CZ sing Y N 290 PHE CE2 HE2 sing N N 291 PHE CZ HZ sing N N 292 PHE OXT HXT sing N N 293 PRO N CA sing N N 294 PRO N CD sing N N 295 PRO N H sing N N 296 PRO CA C sing N N 297 PRO CA CB sing N N 298 PRO CA HA sing N N 299 PRO C O doub N N 300 PRO C OXT sing N N 301 PRO CB CG sing N N 302 PRO CB HB2 sing N N 303 PRO CB HB3 sing N N 304 PRO CG CD sing N N 305 PRO CG HG2 sing N N 306 PRO CG HG3 sing N N 307 PRO CD HD2 sing N N 308 PRO CD HD3 sing N N 309 PRO OXT HXT sing N N 310 SER N CA sing N N 311 SER N H sing N N 312 SER N H2 sing N N 313 SER CA C sing N N 314 SER CA CB sing N N 315 SER CA HA sing N N 316 SER C O doub N N 317 SER C OXT sing N N 318 SER CB OG sing N N 319 SER CB HB2 sing N N 320 SER CB HB3 sing N N 321 SER OG HG sing N N 322 SER OXT HXT sing N N 323 SO4 S O1 doub N N 324 SO4 S O2 doub N N 325 SO4 S O3 sing N N 326 SO4 S O4 sing N N 327 THR N CA sing N N 328 THR N H sing N N 329 THR N H2 sing N N 330 THR CA C sing N N 331 THR CA CB sing N N 332 THR CA HA sing N N 333 THR C O doub N N 334 THR C OXT sing N N 335 THR CB OG1 sing N N 336 THR CB CG2 sing N N 337 THR CB HB sing N N 338 THR OG1 HG1 sing N N 339 THR CG2 HG21 sing N N 340 THR CG2 HG22 sing N N 341 THR CG2 HG23 sing N N 342 THR OXT HXT sing N N 343 TRP N CA sing N N 344 TRP N H sing N N 345 TRP N H2 sing N N 346 TRP CA C sing N N 347 TRP CA CB sing N N 348 TRP CA HA sing N N 349 TRP C O doub N N 350 TRP C OXT sing N N 351 TRP CB CG sing N N 352 TRP CB HB2 sing N N 353 TRP CB HB3 sing N N 354 TRP CG CD1 doub Y N 355 TRP CG CD2 sing Y N 356 TRP CD1 NE1 sing Y N 357 TRP CD1 HD1 sing N N 358 TRP CD2 CE2 doub Y N 359 TRP CD2 CE3 sing Y N 360 TRP NE1 CE2 sing Y N 361 TRP NE1 HE1 sing N N 362 TRP CE2 CZ2 sing Y N 363 TRP CE3 CZ3 doub Y N 364 TRP CE3 HE3 sing N N 365 TRP CZ2 CH2 doub Y N 366 TRP CZ2 HZ2 sing N N 367 TRP CZ3 CH2 sing Y N 368 TRP CZ3 HZ3 sing N N 369 TRP CH2 HH2 sing N N 370 TRP OXT HXT sing N N 371 TYR N CA sing N N 372 TYR N H sing N N 373 TYR N H2 sing N N 374 TYR CA C sing N N 375 TYR CA CB sing N N 376 TYR CA HA sing N N 377 TYR C O doub N N 378 TYR C OXT sing N N 379 TYR CB CG sing N N 380 TYR CB HB2 sing N N 381 TYR CB HB3 sing N N 382 TYR CG CD1 doub Y N 383 TYR CG CD2 sing Y N 384 TYR CD1 CE1 sing Y N 385 TYR CD1 HD1 sing N N 386 TYR CD2 CE2 doub Y N 387 TYR CD2 HD2 sing N N 388 TYR CE1 CZ doub Y N 389 TYR CE1 HE1 sing N N 390 TYR CE2 CZ sing Y N 391 TYR CE2 HE2 sing N N 392 TYR CZ OH sing N N 393 TYR OH HH sing N N 394 TYR OXT HXT sing N N 395 VAL N CA sing N N 396 VAL N H sing N N 397 VAL N H2 sing N N 398 VAL CA C sing N N 399 VAL CA CB sing N N 400 VAL CA HA sing N N 401 VAL C O doub N N 402 VAL C OXT sing N N 403 VAL CB CG1 sing N N 404 VAL CB CG2 sing N N 405 VAL CB HB sing N N 406 VAL CG1 HG11 sing N N 407 VAL CG1 HG12 sing N N 408 VAL CG1 HG13 sing N N 409 VAL CG2 HG21 sing N N 410 VAL CG2 HG22 sing N N 411 VAL CG2 HG23 sing N N 412 VAL OXT HXT sing N N 413 # _atom_sites.entry_id 3V1O _atom_sites.fract_transf_matrix[1][1] 0.018765 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011874 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014179 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_