data_3V7K # _entry.id 3V7K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3V7K pdb_00003v7k 10.2210/pdb3v7k/pdb NDB NA1481 ? ? RCSB RCSB069694 ? ? WWPDB D_1000069694 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-16 2 'Structure model' 1 1 2017-11-08 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 2 'Structure model' software 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3V7K _pdbx_database_status.recvd_initial_deposition_date 2011-12-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3V7J . unspecified PDB 3V7L . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rangarajan, S.' 1 'Jaeger, J.' 2 # _citation.id primary _citation.title ;Crystallographic studies of K72E mutant DNA polymerase explain loss of lyase function and reveal changes in the overall conformational state of the polymerase domain ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rangarajan, S.' 1 ? primary 'Gridley, C.L.' 2 ? primary 'Firbank, S.' 3 ? primary 'Dalal, S.' 4 ? primary 'Sweasy, J.B.' 5 ? primary 'Jaeger, J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 39058.371 1 '2.7.7.7, 4.2.99.-' K72E ? ? 2 polymer syn ;DNA (5'-D(P*AP*TP*GP*TP*GP*AP*GP*T)-3') ; 2481.652 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*CP*AP*AP*AP*CP*TP*CP*AP*CP*AP*A)-3') ; 3295.203 1 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 4 ? ? ? ? 5 water nat water 18.015 127 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGHHHHHHRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEEIDE FLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEM LQMQDIVLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKF MGVCQLPSENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDS EQDIFDYIQWRYREPKDRSE ; ;MGHHHHHHRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEEIDE FLATGKLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEM LQMQDIVLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKF MGVCQLPSENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDS EQDIFDYIQWRYREPKDRSE ; A ? 2 polydeoxyribonucleotide no no '(DA)(DT)(DG)(DT)(DG)(DA)(DG)(DT)' ATGTGAGT P ? 3 polydeoxyribonucleotide no no '(DC)(DA)(DA)(DA)(DC)(DT)(DC)(DA)(DC)(DA)(DA)' CAAACTCACAA T ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SODIUM ION' NA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 ARG n 1 10 LYS n 1 11 ALA n 1 12 PRO n 1 13 GLN n 1 14 GLU n 1 15 THR n 1 16 LEU n 1 17 ASN n 1 18 GLY n 1 19 GLY n 1 20 ILE n 1 21 THR n 1 22 ASP n 1 23 MET n 1 24 LEU n 1 25 VAL n 1 26 GLU n 1 27 LEU n 1 28 ALA n 1 29 ASN n 1 30 PHE n 1 31 GLU n 1 32 LYS n 1 33 ASN n 1 34 VAL n 1 35 SER n 1 36 GLN n 1 37 ALA n 1 38 ILE n 1 39 HIS n 1 40 LYS n 1 41 TYR n 1 42 ASN n 1 43 ALA n 1 44 TYR n 1 45 ARG n 1 46 LYS n 1 47 ALA n 1 48 ALA n 1 49 SER n 1 50 VAL n 1 51 ILE n 1 52 ALA n 1 53 LYS n 1 54 TYR n 1 55 PRO n 1 56 HIS n 1 57 LYS n 1 58 ILE n 1 59 LYS n 1 60 SER n 1 61 GLY n 1 62 ALA n 1 63 GLU n 1 64 ALA n 1 65 LYS n 1 66 LYS n 1 67 LEU n 1 68 PRO n 1 69 GLY n 1 70 VAL n 1 71 GLY n 1 72 THR n 1 73 LYS n 1 74 ILE n 1 75 ALA n 1 76 GLU n 1 77 GLU n 1 78 ILE n 1 79 ASP n 1 80 GLU n 1 81 PHE n 1 82 LEU n 1 83 ALA n 1 84 THR n 1 85 GLY n 1 86 LYS n 1 87 LEU n 1 88 ARG n 1 89 LYS n 1 90 LEU n 1 91 GLU n 1 92 LYS n 1 93 ILE n 1 94 ARG n 1 95 GLN n 1 96 ASP n 1 97 ASP n 1 98 THR n 1 99 SER n 1 100 SER n 1 101 SER n 1 102 ILE n 1 103 ASN n 1 104 PHE n 1 105 LEU n 1 106 THR n 1 107 ARG n 1 108 VAL n 1 109 THR n 1 110 GLY n 1 111 ILE n 1 112 GLY n 1 113 PRO n 1 114 SER n 1 115 ALA n 1 116 ALA n 1 117 ARG n 1 118 LYS n 1 119 LEU n 1 120 VAL n 1 121 ASP n 1 122 GLU n 1 123 GLY n 1 124 ILE n 1 125 LYS n 1 126 THR n 1 127 LEU n 1 128 GLU n 1 129 ASP n 1 130 LEU n 1 131 ARG n 1 132 LYS n 1 133 ASN n 1 134 GLU n 1 135 ASP n 1 136 LYS n 1 137 LEU n 1 138 ASN n 1 139 HIS n 1 140 HIS n 1 141 GLN n 1 142 ARG n 1 143 ILE n 1 144 GLY n 1 145 LEU n 1 146 LYS n 1 147 TYR n 1 148 PHE n 1 149 GLU n 1 150 ASP n 1 151 PHE n 1 152 GLU n 1 153 LYS n 1 154 ARG n 1 155 ILE n 1 156 PRO n 1 157 ARG n 1 158 GLU n 1 159 GLU n 1 160 MET n 1 161 LEU n 1 162 GLN n 1 163 MET n 1 164 GLN n 1 165 ASP n 1 166 ILE n 1 167 VAL n 1 168 LEU n 1 169 ASN n 1 170 GLU n 1 171 VAL n 1 172 LYS n 1 173 LYS n 1 174 LEU n 1 175 ASP n 1 176 PRO n 1 177 GLU n 1 178 TYR n 1 179 ILE n 1 180 ALA n 1 181 THR n 1 182 VAL n 1 183 CYS n 1 184 GLY n 1 185 SER n 1 186 PHE n 1 187 ARG n 1 188 ARG n 1 189 GLY n 1 190 ALA n 1 191 GLU n 1 192 SER n 1 193 SER n 1 194 GLY n 1 195 ASP n 1 196 MET n 1 197 ASP n 1 198 VAL n 1 199 LEU n 1 200 LEU n 1 201 THR n 1 202 HIS n 1 203 PRO n 1 204 ASN n 1 205 PHE n 1 206 THR n 1 207 SER n 1 208 GLU n 1 209 SER n 1 210 SER n 1 211 LYS n 1 212 GLN n 1 213 PRO n 1 214 LYS n 1 215 LEU n 1 216 LEU n 1 217 HIS n 1 218 ARG n 1 219 VAL n 1 220 VAL n 1 221 GLU n 1 222 GLN n 1 223 LEU n 1 224 GLN n 1 225 LYS n 1 226 VAL n 1 227 ARG n 1 228 PHE n 1 229 ILE n 1 230 THR n 1 231 ASP n 1 232 THR n 1 233 LEU n 1 234 SER n 1 235 LYS n 1 236 GLY n 1 237 GLU n 1 238 THR n 1 239 LYS n 1 240 PHE n 1 241 MET n 1 242 GLY n 1 243 VAL n 1 244 CYS n 1 245 GLN n 1 246 LEU n 1 247 PRO n 1 248 SER n 1 249 GLU n 1 250 ASN n 1 251 ASP n 1 252 GLU n 1 253 ASN n 1 254 GLU n 1 255 TYR n 1 256 PRO n 1 257 HIS n 1 258 ARG n 1 259 ARG n 1 260 ILE n 1 261 ASP n 1 262 ILE n 1 263 ARG n 1 264 LEU n 1 265 ILE n 1 266 PRO n 1 267 LYS n 1 268 ASP n 1 269 GLN n 1 270 TYR n 1 271 TYR n 1 272 CYS n 1 273 GLY n 1 274 VAL n 1 275 LEU n 1 276 TYR n 1 277 PHE n 1 278 THR n 1 279 GLY n 1 280 SER n 1 281 ASP n 1 282 ILE n 1 283 PHE n 1 284 ASN n 1 285 LYS n 1 286 ASN n 1 287 MET n 1 288 ARG n 1 289 ALA n 1 290 HIS n 1 291 ALA n 1 292 LEU n 1 293 GLU n 1 294 LYS n 1 295 GLY n 1 296 PHE n 1 297 THR n 1 298 ILE n 1 299 ASN n 1 300 GLU n 1 301 TYR n 1 302 THR n 1 303 ILE n 1 304 ARG n 1 305 PRO n 1 306 LEU n 1 307 GLY n 1 308 VAL n 1 309 THR n 1 310 GLY n 1 311 VAL n 1 312 ALA n 1 313 GLY n 1 314 GLU n 1 315 PRO n 1 316 LEU n 1 317 PRO n 1 318 VAL n 1 319 ASP n 1 320 SER n 1 321 GLU n 1 322 GLN n 1 323 ASP n 1 324 ILE n 1 325 PHE n 1 326 ASP n 1 327 TYR n 1 328 ILE n 1 329 GLN n 1 330 TRP n 1 331 ARG n 1 332 TYR n 1 333 ARG n 1 334 GLU n 1 335 PRO n 1 336 LYS n 1 337 ASP n 1 338 ARG n 1 339 SER n 1 340 GLU n 2 1 DA n 2 2 DT n 2 3 DG n 2 4 DT n 2 5 DG n 2 6 DA n 2 7 DG n 2 8 DT n 3 1 DC n 3 2 DA n 3 3 DA n 3 4 DA n 3 5 DC n 3 6 DT n 3 7 DC n 3 8 DA n 3 9 DC n 3 10 DA n 3 11 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name rat _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Polb _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta2(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -4 ? ? ? A . n A 1 2 GLY 2 -3 ? ? ? A . n A 1 3 HIS 3 -2 ? ? ? A . n A 1 4 HIS 4 -1 ? ? ? A . n A 1 5 HIS 5 0 ? ? ? A . n A 1 6 HIS 6 1 ? ? ? A . n A 1 7 HIS 7 2 ? ? ? A . n A 1 8 HIS 8 3 ? ? ? A . n A 1 9 ARG 9 4 ? ? ? A . n A 1 10 LYS 10 5 5 LYS ALA A . n A 1 11 ALA 11 6 6 ALA ALA A . n A 1 12 PRO 12 7 7 PRO ALA A . n A 1 13 GLN 13 8 8 GLN ALA A . n A 1 14 GLU 14 9 9 GLU GLU A . n A 1 15 THR 15 10 10 THR THR A . n A 1 16 LEU 16 11 11 LEU LEU A . n A 1 17 ASN 17 12 12 ASN ASN A . n A 1 18 GLY 18 13 13 GLY GLY A . n A 1 19 GLY 19 14 14 GLY GLY A . n A 1 20 ILE 20 15 15 ILE ILE A . n A 1 21 THR 21 16 16 THR THR A . n A 1 22 ASP 22 17 17 ASP ASP A . n A 1 23 MET 23 18 18 MET MET A . n A 1 24 LEU 24 19 19 LEU LEU A . n A 1 25 VAL 25 20 20 VAL VAL A . n A 1 26 GLU 26 21 21 GLU GLU A . n A 1 27 LEU 27 22 22 LEU LEU A . n A 1 28 ALA 28 23 23 ALA ALA A . n A 1 29 ASN 29 24 24 ASN ASN A . n A 1 30 PHE 30 25 25 PHE PHE A . n A 1 31 GLU 31 26 26 GLU GLU A . n A 1 32 LYS 32 27 27 LYS LYS A . n A 1 33 ASN 33 28 28 ASN ASN A . n A 1 34 VAL 34 29 29 VAL VAL A . n A 1 35 SER 35 30 30 SER SER A . n A 1 36 GLN 36 31 31 GLN GLN A . n A 1 37 ALA 37 32 32 ALA ALA A . n A 1 38 ILE 38 33 33 ILE ILE A . n A 1 39 HIS 39 34 34 HIS HIS A . n A 1 40 LYS 40 35 35 LYS LYS A . n A 1 41 TYR 41 36 36 TYR TYR A . n A 1 42 ASN 42 37 37 ASN ASN A . n A 1 43 ALA 43 38 38 ALA ALA A . n A 1 44 TYR 44 39 39 TYR TYR A . n A 1 45 ARG 45 40 40 ARG ARG A . n A 1 46 LYS 46 41 41 LYS LYS A . n A 1 47 ALA 47 42 42 ALA ALA A . n A 1 48 ALA 48 43 43 ALA ALA A . n A 1 49 SER 49 44 44 SER SER A . n A 1 50 VAL 50 45 45 VAL VAL A . n A 1 51 ILE 51 46 46 ILE ILE A . n A 1 52 ALA 52 47 47 ALA ALA A . n A 1 53 LYS 53 48 48 LYS LYS A . n A 1 54 TYR 54 49 49 TYR TYR A . n A 1 55 PRO 55 50 50 PRO PRO A . n A 1 56 HIS 56 51 51 HIS HIS A . n A 1 57 LYS 57 52 52 LYS LYS A . n A 1 58 ILE 58 53 53 ILE ILE A . n A 1 59 LYS 59 54 54 LYS LYS A . n A 1 60 SER 60 55 55 SER SER A . n A 1 61 GLY 61 56 56 GLY GLY A . n A 1 62 ALA 62 57 57 ALA ALA A . n A 1 63 GLU 63 58 58 GLU GLU A . n A 1 64 ALA 64 59 59 ALA ALA A . n A 1 65 LYS 65 60 60 LYS LYS A . n A 1 66 LYS 66 61 61 LYS LYS A . n A 1 67 LEU 67 62 62 LEU LEU A . n A 1 68 PRO 68 63 63 PRO PRO A . n A 1 69 GLY 69 64 64 GLY GLY A . n A 1 70 VAL 70 65 65 VAL VAL A . n A 1 71 GLY 71 66 66 GLY GLY A . n A 1 72 THR 72 67 67 THR THR A . n A 1 73 LYS 73 68 68 LYS LYS A . n A 1 74 ILE 74 69 69 ILE ILE A . n A 1 75 ALA 75 70 70 ALA ALA A . n A 1 76 GLU 76 71 71 GLU GLU A . n A 1 77 GLU 77 72 72 GLU GLU A . n A 1 78 ILE 78 73 73 ILE ILE A . n A 1 79 ASP 79 74 74 ASP ASP A . n A 1 80 GLU 80 75 75 GLU GLU A . n A 1 81 PHE 81 76 76 PHE PHE A . n A 1 82 LEU 82 77 77 LEU LEU A . n A 1 83 ALA 83 78 78 ALA ALA A . n A 1 84 THR 84 79 79 THR THR A . n A 1 85 GLY 85 80 80 GLY GLY A . n A 1 86 LYS 86 81 81 LYS LYS A . n A 1 87 LEU 87 82 82 LEU LEU A . n A 1 88 ARG 88 83 83 ARG ARG A . n A 1 89 LYS 89 84 84 LYS LYS A . n A 1 90 LEU 90 85 85 LEU LEU A . n A 1 91 GLU 91 86 86 GLU GLU A . n A 1 92 LYS 92 87 87 LYS LYS A . n A 1 93 ILE 93 88 88 ILE ILE A . n A 1 94 ARG 94 89 89 ARG ARG A . n A 1 95 GLN 95 90 90 GLN GLN A . n A 1 96 ASP 96 91 91 ASP ASP A . n A 1 97 ASP 97 92 92 ASP ASP A . n A 1 98 THR 98 93 93 THR THR A . n A 1 99 SER 99 94 94 SER SER A . n A 1 100 SER 100 95 95 SER SER A . n A 1 101 SER 101 96 96 SER SER A . n A 1 102 ILE 102 97 97 ILE ILE A . n A 1 103 ASN 103 98 98 ASN ASN A . n A 1 104 PHE 104 99 99 PHE PHE A . n A 1 105 LEU 105 100 100 LEU LEU A . n A 1 106 THR 106 101 101 THR THR A . n A 1 107 ARG 107 102 102 ARG ARG A . n A 1 108 VAL 108 103 103 VAL VAL A . n A 1 109 THR 109 104 104 THR THR A . n A 1 110 GLY 110 105 105 GLY GLY A . n A 1 111 ILE 111 106 106 ILE ILE A . n A 1 112 GLY 112 107 107 GLY GLY A . n A 1 113 PRO 113 108 108 PRO PRO A . n A 1 114 SER 114 109 109 SER SER A . n A 1 115 ALA 115 110 110 ALA ALA A . n A 1 116 ALA 116 111 111 ALA ALA A . n A 1 117 ARG 117 112 112 ARG ARG A . n A 1 118 LYS 118 113 113 LYS LYS A . n A 1 119 LEU 119 114 114 LEU LEU A . n A 1 120 VAL 120 115 115 VAL VAL A . n A 1 121 ASP 121 116 116 ASP ASP A . n A 1 122 GLU 122 117 117 GLU GLU A . n A 1 123 GLY 123 118 118 GLY GLY A . n A 1 124 ILE 124 119 119 ILE ILE A . n A 1 125 LYS 125 120 120 LYS LYS A . n A 1 126 THR 126 121 121 THR THR A . n A 1 127 LEU 127 122 122 LEU LEU A . n A 1 128 GLU 128 123 123 GLU GLU A . n A 1 129 ASP 129 124 124 ASP ASP A . n A 1 130 LEU 130 125 125 LEU LEU A . n A 1 131 ARG 131 126 126 ARG ARG A . n A 1 132 LYS 132 127 127 LYS LYS A . n A 1 133 ASN 133 128 128 ASN ASN A . n A 1 134 GLU 134 129 129 GLU GLU A . n A 1 135 ASP 135 130 130 ASP ASP A . n A 1 136 LYS 136 131 131 LYS LYS A . n A 1 137 LEU 137 132 132 LEU LEU A . n A 1 138 ASN 138 133 133 ASN ASN A . n A 1 139 HIS 139 134 134 HIS HIS A . n A 1 140 HIS 140 135 135 HIS HIS A . n A 1 141 GLN 141 136 136 GLN GLN A . n A 1 142 ARG 142 137 137 ARG ARG A . n A 1 143 ILE 143 138 138 ILE ILE A . n A 1 144 GLY 144 139 139 GLY GLY A . n A 1 145 LEU 145 140 140 LEU LEU A . n A 1 146 LYS 146 141 141 LYS LYS A . n A 1 147 TYR 147 142 142 TYR TYR A . n A 1 148 PHE 148 143 143 PHE PHE A . n A 1 149 GLU 149 144 144 GLU GLU A . n A 1 150 ASP 150 145 145 ASP ASP A . n A 1 151 PHE 151 146 146 PHE PHE A . n A 1 152 GLU 152 147 147 GLU GLU A . n A 1 153 LYS 153 148 148 LYS LYS A . n A 1 154 ARG 154 149 149 ARG ARG A . n A 1 155 ILE 155 150 150 ILE ILE A . n A 1 156 PRO 156 151 151 PRO PRO A . n A 1 157 ARG 157 152 152 ARG ARG A . n A 1 158 GLU 158 153 153 GLU GLU A . n A 1 159 GLU 159 154 154 GLU GLU A . n A 1 160 MET 160 155 155 MET MET A . n A 1 161 LEU 161 156 156 LEU LEU A . n A 1 162 GLN 162 157 157 GLN GLN A . n A 1 163 MET 163 158 158 MET MET A . n A 1 164 GLN 164 159 159 GLN GLN A . n A 1 165 ASP 165 160 160 ASP ASP A . n A 1 166 ILE 166 161 161 ILE ILE A . n A 1 167 VAL 167 162 162 VAL VAL A . n A 1 168 LEU 168 163 163 LEU LEU A . n A 1 169 ASN 169 164 164 ASN ASN A . n A 1 170 GLU 170 165 165 GLU GLU A . n A 1 171 VAL 171 166 166 VAL VAL A . n A 1 172 LYS 172 167 167 LYS LYS A . n A 1 173 LYS 173 168 168 LYS LYS A . n A 1 174 LEU 174 169 169 LEU LEU A . n A 1 175 ASP 175 170 170 ASP ASP A . n A 1 176 PRO 176 171 171 PRO PRO A . n A 1 177 GLU 177 172 172 GLU GLU A . n A 1 178 TYR 178 173 173 TYR TYR A . n A 1 179 ILE 179 174 174 ILE ILE A . n A 1 180 ALA 180 175 175 ALA ALA A . n A 1 181 THR 181 176 176 THR THR A . n A 1 182 VAL 182 177 177 VAL VAL A . n A 1 183 CYS 183 178 178 CYS CYS A . n A 1 184 GLY 184 179 179 GLY GLY A . n A 1 185 SER 185 180 180 SER SER A . n A 1 186 PHE 186 181 181 PHE PHE A . n A 1 187 ARG 187 182 182 ARG ARG A . n A 1 188 ARG 188 183 183 ARG ARG A . n A 1 189 GLY 189 184 184 GLY GLY A . n A 1 190 ALA 190 185 185 ALA ALA A . n A 1 191 GLU 191 186 186 GLU GLU A . n A 1 192 SER 192 187 187 SER SER A . n A 1 193 SER 193 188 188 SER SER A . n A 1 194 GLY 194 189 189 GLY GLY A . n A 1 195 ASP 195 190 190 ASP ASP A . n A 1 196 MET 196 191 191 MET MET A . n A 1 197 ASP 197 192 192 ASP ASP A . n A 1 198 VAL 198 193 193 VAL VAL A . n A 1 199 LEU 199 194 194 LEU LEU A . n A 1 200 LEU 200 195 195 LEU LEU A . n A 1 201 THR 201 196 196 THR THR A . n A 1 202 HIS 202 197 197 HIS HIS A . n A 1 203 PRO 203 198 198 PRO PRO A . n A 1 204 ASN 204 199 199 ASN ASN A . n A 1 205 PHE 205 200 200 PHE PHE A . n A 1 206 THR 206 201 201 THR THR A . n A 1 207 SER 207 202 202 SER SER A . n A 1 208 GLU 208 203 203 GLU GLU A . n A 1 209 SER 209 204 204 SER SER A . n A 1 210 SER 210 205 205 SER SER A . n A 1 211 LYS 211 206 206 LYS LYS A . n A 1 212 GLN 212 207 207 GLN GLN A . n A 1 213 PRO 213 208 208 PRO PRO A . n A 1 214 LYS 214 209 209 LYS LYS A . n A 1 215 LEU 215 210 210 LEU LEU A . n A 1 216 LEU 216 211 211 LEU LEU A . n A 1 217 HIS 217 212 212 HIS HIS A . n A 1 218 ARG 218 213 213 ARG ARG A . n A 1 219 VAL 219 214 214 VAL VAL A . n A 1 220 VAL 220 215 215 VAL VAL A . n A 1 221 GLU 221 216 216 GLU GLU A . n A 1 222 GLN 222 217 217 GLN GLN A . n A 1 223 LEU 223 218 218 LEU LEU A . n A 1 224 GLN 224 219 219 GLN GLN A . n A 1 225 LYS 225 220 220 LYS LYS A . n A 1 226 VAL 226 221 221 VAL VAL A . n A 1 227 ARG 227 222 222 ARG ARG A . n A 1 228 PHE 228 223 223 PHE PHE A . n A 1 229 ILE 229 224 224 ILE ILE A . n A 1 230 THR 230 225 225 THR THR A . n A 1 231 ASP 231 226 226 ASP ASP A . n A 1 232 THR 232 227 227 THR THR A . n A 1 233 LEU 233 228 228 LEU LEU A . n A 1 234 SER 234 229 229 SER SER A . n A 1 235 LYS 235 230 230 LYS LYS A . n A 1 236 GLY 236 231 231 GLY GLY A . n A 1 237 GLU 237 232 232 GLU GLU A . n A 1 238 THR 238 233 233 THR THR A . n A 1 239 LYS 239 234 234 LYS LYS A . n A 1 240 PHE 240 235 235 PHE PHE A . n A 1 241 MET 241 236 236 MET MET A . n A 1 242 GLY 242 237 237 GLY GLY A . n A 1 243 VAL 243 238 238 VAL VAL A . n A 1 244 CYS 244 239 239 CYS CYS A . n A 1 245 GLN 245 240 240 GLN GLN A . n A 1 246 LEU 246 241 241 LEU LEU A . n A 1 247 PRO 247 242 242 PRO PRO A . n A 1 248 SER 248 243 243 SER SER A . n A 1 249 GLU 249 244 244 GLU GLU A . n A 1 250 ASN 250 245 245 ASN ASN A . n A 1 251 ASP 251 246 246 ASP ASP A . n A 1 252 GLU 252 247 247 GLU GLU A . n A 1 253 ASN 253 248 248 ASN ASN A . n A 1 254 GLU 254 249 249 GLU GLU A . n A 1 255 TYR 255 250 250 TYR TYR A . n A 1 256 PRO 256 251 251 PRO PRO A . n A 1 257 HIS 257 252 252 HIS HIS A . n A 1 258 ARG 258 253 253 ARG ARG A . n A 1 259 ARG 259 254 254 ARG ARG A . n A 1 260 ILE 260 255 255 ILE ILE A . n A 1 261 ASP 261 256 256 ASP ASP A . n A 1 262 ILE 262 257 257 ILE ILE A . n A 1 263 ARG 263 258 258 ARG ARG A . n A 1 264 LEU 264 259 259 LEU LEU A . n A 1 265 ILE 265 260 260 ILE ILE A . n A 1 266 PRO 266 261 261 PRO PRO A . n A 1 267 LYS 267 262 262 LYS LYS A . n A 1 268 ASP 268 263 263 ASP ASP A . n A 1 269 GLN 269 264 264 GLN GLN A . n A 1 270 TYR 270 265 265 TYR TYR A . n A 1 271 TYR 271 266 266 TYR TYR A . n A 1 272 CYS 272 267 267 CYS CYS A . n A 1 273 GLY 273 268 268 GLY GLY A . n A 1 274 VAL 274 269 269 VAL VAL A . n A 1 275 LEU 275 270 270 LEU LEU A . n A 1 276 TYR 276 271 271 TYR TYR A . n A 1 277 PHE 277 272 272 PHE PHE A . n A 1 278 THR 278 273 273 THR THR A . n A 1 279 GLY 279 274 274 GLY GLY A . n A 1 280 SER 280 275 275 SER SER A . n A 1 281 ASP 281 276 276 ASP ASP A . n A 1 282 ILE 282 277 277 ILE ILE A . n A 1 283 PHE 283 278 278 PHE PHE A . n A 1 284 ASN 284 279 279 ASN ASN A . n A 1 285 LYS 285 280 280 LYS LYS A . n A 1 286 ASN 286 281 281 ASN ASN A . n A 1 287 MET 287 282 282 MET MET A . n A 1 288 ARG 288 283 283 ARG ARG A . n A 1 289 ALA 289 284 284 ALA ALA A . n A 1 290 HIS 290 285 285 HIS HIS A . n A 1 291 ALA 291 286 286 ALA ALA A . n A 1 292 LEU 292 287 287 LEU LEU A . n A 1 293 GLU 293 288 288 GLU GLU A . n A 1 294 LYS 294 289 289 LYS LYS A . n A 1 295 GLY 295 290 290 GLY GLY A . n A 1 296 PHE 296 291 291 PHE PHE A . n A 1 297 THR 297 292 292 THR THR A . n A 1 298 ILE 298 293 293 ILE ILE A . n A 1 299 ASN 299 294 294 ASN ASN A . n A 1 300 GLU 300 295 295 GLU GLU A . n A 1 301 TYR 301 296 296 TYR TYR A . n A 1 302 THR 302 297 297 THR THR A . n A 1 303 ILE 303 298 298 ILE ILE A . n A 1 304 ARG 304 299 299 ARG ARG A . n A 1 305 PRO 305 300 300 PRO PRO A . n A 1 306 LEU 306 301 301 LEU LEU A . n A 1 307 GLY 307 302 302 GLY GLY A . n A 1 308 VAL 308 303 303 VAL VAL A . n A 1 309 THR 309 304 304 THR THR A . n A 1 310 GLY 310 305 305 GLY GLY A . n A 1 311 VAL 311 306 306 VAL VAL A . n A 1 312 ALA 312 307 307 ALA ALA A . n A 1 313 GLY 313 308 308 GLY GLY A . n A 1 314 GLU 314 309 309 GLU GLU A . n A 1 315 PRO 315 310 310 PRO PRO A . n A 1 316 LEU 316 311 311 LEU LEU A . n A 1 317 PRO 317 312 312 PRO PRO A . n A 1 318 VAL 318 313 313 VAL VAL A . n A 1 319 ASP 319 314 314 ASP ASP A . n A 1 320 SER 320 315 315 SER SER A . n A 1 321 GLU 321 316 316 GLU GLU A . n A 1 322 GLN 322 317 317 GLN GLN A . n A 1 323 ASP 323 318 318 ASP ASP A . n A 1 324 ILE 324 319 319 ILE ILE A . n A 1 325 PHE 325 320 320 PHE PHE A . n A 1 326 ASP 326 321 321 ASP ASP A . n A 1 327 TYR 327 322 322 TYR TYR A . n A 1 328 ILE 328 323 323 ILE ILE A . n A 1 329 GLN 329 324 324 GLN GLN A . n A 1 330 TRP 330 325 325 TRP TRP A . n A 1 331 ARG 331 326 326 ARG ARG A . n A 1 332 TYR 332 327 327 TYR TYR A . n A 1 333 ARG 333 328 328 ARG ARG A . n A 1 334 GLU 334 329 329 GLU GLU A . n A 1 335 PRO 335 330 330 PRO PRO A . n A 1 336 LYS 336 331 331 LYS LYS A . n A 1 337 ASP 337 332 332 ASP ASP A . n A 1 338 ARG 338 333 333 ARG ARG A . n A 1 339 SER 339 334 334 SER SER A . n A 1 340 GLU 340 335 335 GLU GLU A . n B 2 1 DA 1 0 0 DA DA P . n B 2 2 DT 2 1 1 DT DT P . n B 2 3 DG 3 2 2 DG DG P . n B 2 4 DT 4 3 3 DT DT P . n B 2 5 DG 5 4 4 DG DG P . n B 2 6 DA 6 5 5 DA DA P . n B 2 7 DG 7 6 6 DG DG P . n B 2 8 DT 8 7 7 DT DT P . n C 3 1 DC 1 1 1 DC DC T . n C 3 2 DA 2 2 2 DA DA T . n C 3 3 DA 3 3 3 DA DA T . n C 3 4 DA 4 4 4 DA DA T . n C 3 5 DC 5 5 5 DC DC T . n C 3 6 DT 6 6 6 DT DT T . n C 3 7 DC 7 7 7 DC DC T . n C 3 8 DA 8 8 8 DA DA T . n C 3 9 DC 9 9 9 DC DC T . n C 3 10 DA 10 10 10 DA DA T . n C 3 11 DA 11 11 11 DA DA T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA 1 401 1 NA NA A . E 4 NA 1 402 2 NA NA A . F 4 NA 1 403 3 NA NA A . G 4 NA 1 404 4 NA NA A . H 5 HOH 1 501 1 HOH HOH A . H 5 HOH 2 502 2 HOH HOH A . H 5 HOH 3 503 3 HOH HOH A . H 5 HOH 4 504 4 HOH HOH A . H 5 HOH 5 505 5 HOH HOH A . H 5 HOH 6 506 7 HOH HOH A . H 5 HOH 7 507 9 HOH HOH A . H 5 HOH 8 508 10 HOH HOH A . H 5 HOH 9 509 11 HOH HOH A . H 5 HOH 10 510 13 HOH HOH A . H 5 HOH 11 511 14 HOH HOH A . H 5 HOH 12 512 15 HOH HOH A . H 5 HOH 13 513 16 HOH HOH A . H 5 HOH 14 514 17 HOH HOH A . H 5 HOH 15 515 18 HOH HOH A . H 5 HOH 16 516 19 HOH HOH A . H 5 HOH 17 517 21 HOH HOH A . H 5 HOH 18 518 22 HOH HOH A . H 5 HOH 19 519 23 HOH HOH A . H 5 HOH 20 520 24 HOH HOH A . H 5 HOH 21 521 25 HOH HOH A . H 5 HOH 22 522 26 HOH HOH A . H 5 HOH 23 523 29 HOH HOH A . H 5 HOH 24 524 31 HOH HOH A . H 5 HOH 25 525 33 HOH HOH A . H 5 HOH 26 526 34 HOH HOH A . H 5 HOH 27 527 35 HOH HOH A . H 5 HOH 28 528 36 HOH HOH A . H 5 HOH 29 529 37 HOH HOH A . H 5 HOH 30 530 38 HOH HOH A . H 5 HOH 31 531 39 HOH HOH A . H 5 HOH 32 532 41 HOH HOH A . H 5 HOH 33 533 42 HOH HOH A . H 5 HOH 34 534 43 HOH HOH A . H 5 HOH 35 535 44 HOH HOH A . H 5 HOH 36 536 45 HOH HOH A . H 5 HOH 37 537 48 HOH HOH A . H 5 HOH 38 538 50 HOH HOH A . H 5 HOH 39 539 51 HOH HOH A . H 5 HOH 40 540 52 HOH HOH A . H 5 HOH 41 541 53 HOH HOH A . H 5 HOH 42 542 57 HOH HOH A . H 5 HOH 43 543 58 HOH HOH A . H 5 HOH 44 544 59 HOH HOH A . H 5 HOH 45 545 61 HOH HOH A . H 5 HOH 46 546 62 HOH HOH A . H 5 HOH 47 547 64 HOH HOH A . H 5 HOH 48 548 65 HOH HOH A . H 5 HOH 49 549 66 HOH HOH A . H 5 HOH 50 550 68 HOH HOH A . H 5 HOH 51 551 70 HOH HOH A . H 5 HOH 52 552 73 HOH HOH A . H 5 HOH 53 553 74 HOH HOH A . H 5 HOH 54 554 75 HOH HOH A . H 5 HOH 55 555 77 HOH HOH A . H 5 HOH 56 556 78 HOH HOH A . H 5 HOH 57 557 79 HOH HOH A . H 5 HOH 58 558 81 HOH HOH A . H 5 HOH 59 559 82 HOH HOH A . H 5 HOH 60 560 83 HOH HOH A . H 5 HOH 61 561 87 HOH HOH A . H 5 HOH 62 562 88 HOH HOH A . H 5 HOH 63 563 90 HOH HOH A . H 5 HOH 64 564 91 HOH HOH A . H 5 HOH 65 565 92 HOH HOH A . H 5 HOH 66 566 93 HOH HOH A . H 5 HOH 67 567 94 HOH HOH A . H 5 HOH 68 568 96 HOH HOH A . H 5 HOH 69 569 97 HOH HOH A . H 5 HOH 70 570 98 HOH HOH A . H 5 HOH 71 571 99 HOH HOH A . H 5 HOH 72 572 100 HOH HOH A . H 5 HOH 73 573 101 HOH HOH A . H 5 HOH 74 574 102 HOH HOH A . H 5 HOH 75 575 103 HOH HOH A . H 5 HOH 76 576 104 HOH HOH A . H 5 HOH 77 577 105 HOH HOH A . H 5 HOH 78 578 109 HOH HOH A . H 5 HOH 79 579 110 HOH HOH A . H 5 HOH 80 580 111 HOH HOH A . H 5 HOH 81 581 112 HOH HOH A . H 5 HOH 82 582 114 HOH HOH A . H 5 HOH 83 583 115 HOH HOH A . H 5 HOH 84 584 116 HOH HOH A . H 5 HOH 85 585 119 HOH HOH A . H 5 HOH 86 586 122 HOH HOH A . H 5 HOH 87 587 123 HOH HOH A . H 5 HOH 88 588 124 HOH HOH A . H 5 HOH 89 589 125 HOH HOH A . H 5 HOH 90 590 126 HOH HOH A . H 5 HOH 91 591 127 HOH HOH A . H 5 HOH 92 592 130 HOH HOH A . H 5 HOH 93 593 134 HOH HOH A . H 5 HOH 94 594 135 HOH HOH A . I 5 HOH 1 101 6 HOH HOH P . I 5 HOH 2 102 12 HOH HOH P . I 5 HOH 3 103 20 HOH HOH P . I 5 HOH 4 104 27 HOH HOH P . I 5 HOH 5 105 60 HOH HOH P . I 5 HOH 6 106 63 HOH HOH P . I 5 HOH 7 107 69 HOH HOH P . I 5 HOH 8 108 76 HOH HOH P . I 5 HOH 9 109 80 HOH HOH P . I 5 HOH 10 110 89 HOH HOH P . I 5 HOH 11 111 95 HOH HOH P . I 5 HOH 12 112 107 HOH HOH P . I 5 HOH 13 113 118 HOH HOH P . I 5 HOH 14 114 120 HOH HOH P . I 5 HOH 15 115 131 HOH HOH P . J 5 HOH 1 101 8 HOH HOH T . J 5 HOH 2 102 28 HOH HOH T . J 5 HOH 3 103 30 HOH HOH T . J 5 HOH 4 104 40 HOH HOH T . J 5 HOH 5 105 46 HOH HOH T . J 5 HOH 6 106 47 HOH HOH T . J 5 HOH 7 107 54 HOH HOH T . J 5 HOH 8 108 55 HOH HOH T . J 5 HOH 9 109 56 HOH HOH T . J 5 HOH 10 110 71 HOH HOH T . J 5 HOH 11 111 72 HOH HOH T . J 5 HOH 12 112 85 HOH HOH T . J 5 HOH 13 113 86 HOH HOH T . J 5 HOH 14 114 106 HOH HOH T . J 5 HOH 15 115 108 HOH HOH T . J 5 HOH 16 116 113 HOH HOH T . J 5 HOH 17 117 117 HOH HOH T . J 5 HOH 18 118 121 HOH HOH T . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 5 ? CG ? A LYS 10 CG 2 1 Y 1 A LYS 5 ? CD ? A LYS 10 CD 3 1 Y 1 A LYS 5 ? CE ? A LYS 10 CE 4 1 Y 1 A LYS 5 ? NZ ? A LYS 10 NZ 5 1 Y 1 A PRO 7 ? CG ? A PRO 12 CG 6 1 Y 1 A PRO 7 ? CD ? A PRO 12 CD 7 1 Y 1 A GLN 8 ? CG ? A GLN 13 CG 8 1 Y 1 A GLN 8 ? CD ? A GLN 13 CD 9 1 Y 1 A GLN 8 ? OE1 ? A GLN 13 OE1 10 1 Y 1 A GLN 8 ? NE2 ? A GLN 13 NE2 11 1 Y 0 A ARG 112 ? N A A ARG 117 N 12 1 Y 0 A ARG 112 ? CA A A ARG 117 CA 13 1 Y 0 A ARG 112 ? C A A ARG 117 C 14 1 Y 0 A ARG 112 ? O A A ARG 117 O 15 1 Y 0 A ARG 112 ? CB A A ARG 117 CB 16 1 Y 0 A ARG 112 ? CG A A ARG 117 CG 17 1 Y 0 A ARG 112 ? CD A A ARG 117 CD 18 1 Y 0 A ARG 112 ? NE A A ARG 117 NE 19 1 Y 0 A ARG 112 ? CZ A A ARG 117 CZ 20 1 Y 0 A ARG 112 ? NH1 A A ARG 117 NH1 21 1 Y 0 A ARG 112 ? NH2 A A ARG 117 NH2 22 1 Y 1 P DT 7 ? "O3'" ? B DT 8 "O3'" 23 1 Y 1 T DA 11 ? "C5'" ? C DA 11 "C5'" 24 1 Y 1 T DA 11 ? "C4'" ? C DA 11 "C4'" 25 1 Y 1 T DA 11 ? "O4'" ? C DA 11 "O4'" 26 1 Y 1 T DA 11 ? "C3'" ? C DA 11 "C3'" 27 1 Y 1 T DA 11 ? "O3'" ? C DA 11 "O3'" 28 1 Y 1 T DA 11 ? "C2'" ? C DA 11 "C2'" 29 1 Y 1 T DA 11 ? "C1'" ? C DA 11 "C1'" 30 1 Y 1 T DA 11 ? N9 ? C DA 11 N9 31 1 Y 1 T DA 11 ? C8 ? C DA 11 C8 32 1 Y 1 T DA 11 ? N7 ? C DA 11 N7 33 1 Y 1 T DA 11 ? C5 ? C DA 11 C5 34 1 Y 1 T DA 11 ? C6 ? C DA 11 C6 35 1 Y 1 T DA 11 ? N6 ? C DA 11 N6 36 1 Y 1 T DA 11 ? N1 ? C DA 11 N1 37 1 Y 1 T DA 11 ? C2 ? C DA 11 C2 38 1 Y 1 T DA 11 ? N3 ? C DA 11 N3 39 1 Y 1 T DA 11 ? C4 ? C DA 11 C4 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHENIX refinement '(phenix.refine: 1.7.2_869)' ? 2 HKL-2000 'data reduction' . ? 3 SCALA 'data scaling' . ? 4 # _cell.entry_id 3V7K _cell.length_a 56.464 _cell.length_b 75.508 _cell.length_c 117.359 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3V7K _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3V7K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.79 _exptl_crystal.density_percent_sol 55.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 3350, NaCl, Glycerol, Cacodylate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 296K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-09-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal bender' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.04 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.04 # _reflns.entry_id 3V7K _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 30.30 _reflns.d_resolution_high 2.271 _reflns.number_obs 23840 _reflns.number_all 201278 _reflns.percent_possible_obs 91.49 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.062 _reflns.pdbx_netI_over_sigmaI 38.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.2711 _reflns_shell.d_res_low 2.3279 _reflns_shell.percent_possible_all 72.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.649 _reflns_shell.meanI_over_sigI_obs 1.627 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3V7K _refine.ls_number_reflns_obs 21799 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.09 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.30 _refine.ls_d_res_high 2.271 _refine.ls_percent_reflns_obs 91.49 _refine.ls_R_factor_obs 0.2298 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2253 _refine.ls_R_factor_R_free 0.2770 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.71 _refine.ls_number_reflns_R_free 1899 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -0.3239 _refine.aniso_B[2][2] 12.6877 _refine.aniso_B[3][3] -0.8635 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.313 _refine.solvent_model_param_bsol 31.995 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.98 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.73 _refine.pdbx_overall_phase_error 26.95 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2653 _refine_hist.pdbx_number_atoms_nucleic_acid 372 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 127 _refine_hist.number_atoms_total 3156 _refine_hist.d_res_high 2.271 _refine_hist.d_res_low 30.30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 3145 ? 'X-RAY DIFFRACTION' f_angle_d 1.273 ? ? 4316 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 18.899 ? ? 1238 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.084 ? ? 472 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 503 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.2711 2.3279 1199 0.2973 79.00 0.3623 . . 110 . . . . 'X-RAY DIFFRACTION' . 2.3279 2.3908 1382 0.2705 90.00 0.3112 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.3908 2.4611 1394 0.2777 91.00 0.3095 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.4611 2.5405 1397 0.2773 92.00 0.2964 . . 133 . . . . 'X-RAY DIFFRACTION' . 2.5405 2.6313 1423 0.2847 93.00 0.3780 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.6313 2.7366 1441 0.2496 94.00 0.2942 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.7366 2.8610 1488 0.2523 97.00 0.3114 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.8610 3.0118 1509 0.2325 98.00 0.2655 . . 145 . . . . 'X-RAY DIFFRACTION' . 3.0118 3.2003 1508 0.2337 98.00 0.2654 . . 144 . . . . 'X-RAY DIFFRACTION' . 3.2003 3.4470 1504 0.2319 97.00 0.2898 . . 147 . . . . 'X-RAY DIFFRACTION' . 3.4470 3.7933 1099 0.3059 70.00 0.3161 . . 106 . . . . 'X-RAY DIFFRACTION' . 3.7933 4.3409 1348 0.2020 86.00 0.2861 . . 127 . . . . 'X-RAY DIFFRACTION' . 4.3409 5.4638 1579 0.1712 100.00 0.2357 . . 150 . . . . 'X-RAY DIFFRACTION' . 5.4638 30.3219 1629 0.1886 97.00 0.2339 . . 154 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3V7K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3V7K _struct.title 'Co-crystal structure of K72E variant of rat polymerase beta: Enzyme-DNA binary complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3V7K _struct_keywords.pdbx_keywords Transferase/DNA _struct_keywords.text 'Protein-DNA complex, repair polymerase, Transferase-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 5 ? J N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_RAT P06766 1 ;RKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLR KLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVL NEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPS ENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIFDYI QWRYREPKDRSE ; 4 ? 2 PDB 3V7K 3V7K 2 ? ? ? 3 PDB 3V7K 3V7K 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3V7K A 9 ? 340 ? P06766 4 ? 335 ? 4 335 2 2 3V7K P 1 ? 8 ? 3V7K 0 ? 7 ? 0 7 3 3 3V7K T 1 ? 11 ? 3V7K 1 ? 11 ? 1 11 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3V7K MET A 1 ? UNP P06766 ? ? 'initiating methionine' -4 1 1 3V7K GLY A 2 ? UNP P06766 ? ? 'expression tag' -3 2 1 3V7K HIS A 3 ? UNP P06766 ? ? 'expression tag' -2 3 1 3V7K HIS A 4 ? UNP P06766 ? ? 'expression tag' -1 4 1 3V7K HIS A 5 ? UNP P06766 ? ? 'expression tag' 0 5 1 3V7K HIS A 6 ? UNP P06766 ? ? 'expression tag' 1 6 1 3V7K HIS A 7 ? UNP P06766 ? ? 'expression tag' 2 7 1 3V7K HIS A 8 ? UNP P06766 ? ? 'expression tag' 3 8 1 3V7K GLU A 77 ? UNP P06766 LYS 72 'engineered mutation' 72 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2750 ? 1 MORE -44 ? 1 'SSA (A^2)' 20150 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 17 ? VAL A 34 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA A 37 ? TYR A 54 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 3 SER A 60 ? LYS A 66 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY A 71 ? THR A 84 ? GLY A 66 THR A 79 1 ? 14 HELX_P HELX_P5 5 LEU A 87 ? ASP A 96 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP A 96 ? ARG A 107 ? ASP A 91 ARG A 102 1 ? 12 HELX_P HELX_P7 7 GLY A 112 ? GLU A 122 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR A 126 ? LYS A 132 ? THR A 121 LYS A 127 1 ? 7 HELX_P HELX_P9 9 ASN A 133 ? LEU A 137 ? ASN A 128 LEU A 132 5 ? 5 HELX_P HELX_P10 10 ASN A 138 ? TYR A 147 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 GLU A 149 ? LYS A 153 ? GLU A 144 LYS A 148 5 ? 5 HELX_P HELX_P12 12 ARG A 157 ? ASP A 175 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 13 CYS A 183 ? ARG A 188 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 14 PRO A 213 ? VAL A 226 ? PRO A 208 VAL A 221 1 ? 14 HELX_P HELX_P15 15 PRO A 266 ? ASP A 268 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN A 269 ? GLY A 279 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER A 280 ? GLY A 295 ? SER A 275 GLY A 290 1 ? 16 HELX_P HELX_P18 18 SER A 320 ? ILE A 328 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 19 GLU A 334 ? ARG A 338 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 10 N1 ? ? P DT 1 T DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 10 N6 ? ? P DT 1 T DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 9 N3 ? ? P DG 2 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 9 O2 ? ? P DG 2 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 9 N4 ? ? P DG 2 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 8 N1 ? ? P DT 3 T DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 8 N6 ? ? P DT 3 T DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 7 N3 ? ? P DG 4 T DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 7 O2 ? ? P DG 4 T DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 7 N4 ? ? P DG 4 T DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 6 N3 ? ? P DA 5 T DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 6 O4 ? ? P DA 5 T DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 5 N3 ? ? P DG 6 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 5 O2 ? ? P DG 6 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 5 N4 ? ? P DG 6 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 4 N1 ? ? P DT 7 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 4 N6 ? ? P DT 7 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 10 A . ? LYS 5 A ALA 11 A ? ALA 6 A 1 4.45 2 ALA 11 A . ? ALA 6 A PRO 12 A ? PRO 7 A 1 8.21 3 GLU 14 A . ? GLU 9 A THR 15 A ? THR 10 A 1 7.63 4 GLY 279 A . ? GLY 274 A SER 280 A ? SER 275 A 1 5.88 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 155 ? PRO A 156 ? ILE A 150 PRO A 151 A 2 SER A 192 ? SER A 193 ? SER A 187 SER A 188 B 1 ILE A 179 ? VAL A 182 ? ILE A 174 VAL A 177 B 2 MET A 196 ? THR A 201 ? MET A 191 THR A 196 B 3 ARG A 258 ? LEU A 264 ? ARG A 253 LEU A 259 B 4 LYS A 239 ? CYS A 244 ? LYS A 234 CYS A 239 B 5 ILE A 229 ? LYS A 235 ? ILE A 224 LYS A 230 C 1 PHE A 296 ? ILE A 298 ? PHE A 291 ILE A 293 C 2 ILE A 303 ? PRO A 305 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 155 ? N ILE A 150 O SER A 193 ? O SER A 188 B 1 2 N ILE A 179 ? N ILE A 174 O THR A 201 ? O THR A 196 B 2 3 N LEU A 200 ? N LEU A 195 O ARG A 263 ? O ARG A 258 B 3 4 O ARG A 258 ? O ARG A 253 N CYS A 244 ? N CYS A 239 B 4 5 O MET A 241 ? O MET A 236 N SER A 234 ? N SER A 229 C 1 2 N THR A 297 ? N THR A 292 O ARG A 304 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 401 ? 1 'BINDING SITE FOR RESIDUE NA A 401' AC2 Software A NA 402 ? 1 'BINDING SITE FOR RESIDUE NA A 402' AC3 Software A NA 404 ? 3 'BINDING SITE FOR RESIDUE NA A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 ASP A 195 ? ASP A 190 . ? 1_555 ? 2 AC2 1 ASP A 195 ? ASP A 190 . ? 1_555 ? 3 AC3 3 THR A 106 ? THR A 101 . ? 1_555 ? 4 AC3 3 ILE A 111 ? ILE A 106 . ? 1_555 ? 5 AC3 3 DG B 7 ? DG P 6 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 216 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 516 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 P _pdbx_validate_rmsd_bond.auth_comp_id_1 DA _pdbx_validate_rmsd_bond.auth_seq_id_1 5 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 P _pdbx_validate_rmsd_bond.auth_comp_id_2 DA _pdbx_validate_rmsd_bond.auth_seq_id_2 5 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.523 _pdbx_validate_rmsd_bond.bond_target_value 1.435 _pdbx_validate_rmsd_bond.bond_deviation 0.088 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.013 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A PRO 7 ? ? CA A PRO 7 ? ? CB A PRO 7 ? ? 112.85 102.60 10.25 1.10 N 2 1 "O4'" P DA 0 ? ? "C1'" P DA 0 ? ? N9 P DA 0 ? ? 112.26 108.30 3.96 0.30 N 3 1 "O4'" P DA 5 ? ? "C4'" P DA 5 ? ? "C3'" P DA 5 ? ? 109.71 106.00 3.71 0.60 N 4 1 "O4'" P DA 5 ? ? "C1'" P DA 5 ? ? N9 P DA 5 ? ? 112.90 108.30 4.60 0.30 N 5 1 P P DG 6 ? ? "O5'" P DG 6 ? ? "C5'" P DG 6 ? ? 110.71 120.90 -10.19 1.60 N 6 1 "O4'" T DC 5 ? ? "C1'" T DC 5 ? ? N1 T DC 5 ? ? 111.46 108.30 3.16 0.30 N 7 1 "C3'" T DC 9 ? ? "C2'" T DC 9 ? ? "C1'" T DC 9 ? ? 96.58 102.40 -5.82 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 6 ? ? 53.25 76.47 2 1 PRO A 7 ? ? 58.12 -175.06 3 1 THR A 10 ? ? 79.77 -25.27 4 1 VAL A 29 ? ? -103.10 -62.50 5 1 GLN A 31 ? ? -113.67 55.62 6 1 ALA A 32 ? ? -111.57 78.45 7 1 ASP A 170 ? ? -176.37 120.39 8 1 CYS A 178 ? ? -99.84 -146.83 9 1 ASP A 190 ? ? 179.23 150.65 10 1 LYS A 206 ? ? 71.83 -74.28 11 1 GLN A 207 ? ? 57.12 87.74 12 1 GLN A 207 ? ? 57.21 87.61 13 1 ASN A 245 ? ? 54.69 -85.30 14 1 ASP A 246 ? ? -107.95 -128.67 15 1 GLU A 247 ? ? 41.63 -149.18 16 1 ASN A 294 ? ? -125.45 -166.32 17 1 GLU A 309 ? ? 52.51 95.08 18 1 SER A 315 ? ? 178.65 149.90 19 1 ARG A 333 ? ? -109.97 40.81 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -4 ? A MET 1 2 1 Y 1 A GLY -3 ? A GLY 2 3 1 Y 1 A HIS -2 ? A HIS 3 4 1 Y 1 A HIS -1 ? A HIS 4 5 1 Y 1 A HIS 0 ? A HIS 5 6 1 Y 1 A HIS 1 ? A HIS 6 7 1 Y 1 A HIS 2 ? A HIS 7 8 1 Y 1 A HIS 3 ? A HIS 8 9 1 Y 1 A ARG 4 ? A ARG 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 NA NA NA N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # _ndb_struct_conf_na.entry_id 3V7K _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DT 2 1_555 C DA 10 1_555 -0.584 -0.171 0.155 -15.425 -8.394 -1.536 1 P_DT1:DA10_T P 1 ? T 10 ? 20 1 1 B DG 3 1_555 C DC 9 1_555 -0.159 -0.064 -0.043 -9.955 -5.690 -0.338 2 P_DG2:DC9_T P 2 ? T 9 ? 19 1 1 B DT 4 1_555 C DA 8 1_555 -0.205 -0.130 0.049 7.425 -9.217 -1.818 3 P_DT3:DA8_T P 3 ? T 8 ? 20 1 1 B DG 5 1_555 C DC 7 1_555 -0.198 -0.168 -0.151 -2.822 -14.844 -0.612 4 P_DG4:DC7_T P 4 ? T 7 ? 19 1 1 B DA 6 1_555 C DT 6 1_555 0.301 -0.119 0.042 0.924 -17.316 6.508 5 P_DA5:DT6_T P 5 ? T 6 ? 20 1 1 B DG 7 1_555 C DC 5 1_555 -0.268 -0.455 -0.130 4.596 -13.937 -0.722 6 P_DG6:DC5_T P 6 ? T 5 ? 19 1 1 B DT 8 1_555 C DA 4 1_555 -0.633 -0.277 -0.472 9.007 -13.578 -0.002 7 P_DT7:DA4_T P 7 ? T 4 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DT 2 1_555 C DA 10 1_555 B DG 3 1_555 C DC 9 1_555 0.205 0.551 3.152 0.500 2.405 41.219 0.532 -0.238 3.180 3.413 -0.709 41.289 1 PP_DT1DG2:DC9DA10_TT P 1 ? T 10 ? P 2 ? T 9 ? 1 B DG 3 1_555 C DC 9 1_555 B DT 4 1_555 C DA 8 1_555 -0.421 -0.265 2.888 -1.468 2.920 27.974 -1.147 0.562 2.864 6.015 3.024 28.161 2 PP_DG2DT3:DA8DC9_TT P 2 ? T 9 ? P 3 ? T 8 ? 1 B DT 4 1_555 C DA 8 1_555 B DG 5 1_555 C DC 7 1_555 0.268 0.089 3.582 1.461 2.695 39.933 -0.208 -0.207 3.587 3.939 -2.136 40.046 3 PP_DT3DG4:DC7DA8_TT P 3 ? T 8 ? P 4 ? T 7 ? 1 B DG 5 1_555 C DC 7 1_555 B DA 6 1_555 C DT 6 1_555 0.205 -0.098 3.165 -0.453 9.623 31.572 -1.751 -0.436 3.003 17.192 0.810 32.973 4 PP_DG4DA5:DT6DC7_TT P 4 ? T 7 ? P 5 ? T 6 ? 1 B DA 6 1_555 C DT 6 1_555 B DG 7 1_555 C DC 5 1_555 -0.178 -0.008 3.359 0.613 8.050 29.373 -1.669 0.464 3.238 15.510 -1.182 30.439 5 PP_DA5DG6:DC5DT6_TT P 5 ? T 6 ? P 6 ? T 5 ? 1 B DG 7 1_555 C DC 5 1_555 B DT 8 1_555 C DA 4 1_555 0.227 -0.146 3.125 2.885 3.329 30.363 -0.902 0.113 3.099 6.314 -5.472 30.673 6 PP_DG6DT7:DA4DC5_TT P 6 ? T 5 ? P 7 ? T 4 ? # _atom_sites.entry_id 3V7K _atom_sites.fract_transf_matrix[1][1] 0.017710 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013244 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008521 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_