data_3VEK # _entry.id 3VEK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VEK pdb_00003vek 10.2210/pdb3vek/pdb NDB NA1549 ? ? RCSB RCSB069946 ? ? WWPDB D_1000069946 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3VD6 _pdbx_database_related.details 'Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P21 Crystal Form' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3VEK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2012-01-09 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jacques, D.A.' 1 'Ripin, N.' 2 'Wilkinson-White, L.E.' 3 'Guss, J.M.' 4 'Matthews, J.M.' 5 # _citation.id primary _citation.title 'GATA1 directly mediates interactions with closely spaced pseudopalindromic but not distantly spaced double GATA sites on DNA.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 24 _citation.page_first 1649 _citation.page_last 1659 _citation.year 2015 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 1469-896X _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26234528 _citation.pdbx_database_id_DOI 10.1002/pro.2760 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wilkinson-White, L.' 1 ? primary 'Lester, K.L.' 2 ? primary 'Ripin, N.' 3 ? primary 'Jacques, D.A.' 4 ? primary 'Mitchell Guss, J.' 5 ? primary 'Matthews, J.M.' 6 ? # _cell.length_a 35.195 _cell.length_b 62.415 _cell.length_c 66.046 _cell.angle_alpha 72.390 _cell.angle_beta 74.570 _cell.angle_gamma 73.630 _cell.entry_id 3VEK _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1' _symmetry.entry_id 3VEK _symmetry.Int_Tables_number 1 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*TP*GP*TP*CP*TP*TP*AP*TP*CP*AP*GP*AP*TP*GP*GP*AP*CP*TP*C)-3') ; 6114.963 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*AP*GP*AP*GP*TP*CP*CP*AP*TP*CP*TP*GP*AP*TP*AP*AP*GP*AP*C)-3') ; 6151.020 2 ? ? ? ? 3 polymer man 'Erythroid transcription factor' 13507.752 2 ? ? 'N and C Fingers, residues 200-318' ? 4 non-polymer syn 'ZINC ION' 65.409 14 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Eryf1, GATA-binding factor 1, GATA-1, GF-1, NF-E1 DNA-binding protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DT)(DG)(DT)(DC)(DT)(DT)(DA)(DT)(DC)(DA)(DG)(DA)(DT)(DG)(DG)(DA)(DC)(DT)(DC)' TTGTCTTATCAGATGGACTC A,D ? 2 polydeoxyribonucleotide no no '(DA)(DA)(DG)(DA)(DG)(DT)(DC)(DC)(DA)(DT)(DC)(DT)(DG)(DA)(DT)(DA)(DA)(DG)(DA)(DC)' AAGAGTCCATCTGATAAGAC B,E ? 3 'polypeptide(L)' no no ;EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLIRPKKRMIVSKRAGTQCTNCQTTTTTLWRRNASGDPVC NACGLYFKLHQVNRPLTMRKDGIQTRNRKASGKGKKKRG ; ;EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLIRPKKRMIVSKRAGTQCTNCQTTTTTLWRRNASGDPVC NACGLYFKLHQVNRPLTMRKDGIQTRNRKASGKGKKKRG ; C,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DG n 1 4 DT n 1 5 DC n 1 6 DT n 1 7 DT n 1 8 DA n 1 9 DT n 1 10 DC n 1 11 DA n 1 12 DG n 1 13 DA n 1 14 DT n 1 15 DG n 1 16 DG n 1 17 DA n 1 18 DC n 1 19 DT n 1 20 DC n 2 1 DA n 2 2 DA n 2 3 DG n 2 4 DA n 2 5 DG n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DA n 2 10 DT n 2 11 DC n 2 12 DT n 2 13 DG n 2 14 DA n 2 15 DT n 2 16 DA n 2 17 DA n 2 18 DG n 2 19 DA n 2 20 DC n 3 1 GLU n 3 2 ALA n 3 3 ARG n 3 4 GLU n 3 5 CYS n 3 6 VAL n 3 7 ASN n 3 8 CYS n 3 9 GLY n 3 10 ALA n 3 11 THR n 3 12 ALA n 3 13 THR n 3 14 PRO n 3 15 LEU n 3 16 TRP n 3 17 ARG n 3 18 ARG n 3 19 ASP n 3 20 ARG n 3 21 THR n 3 22 GLY n 3 23 HIS n 3 24 TYR n 3 25 LEU n 3 26 CYS n 3 27 ASN n 3 28 ALA n 3 29 CYS n 3 30 GLY n 3 31 LEU n 3 32 TYR n 3 33 HIS n 3 34 LYS n 3 35 MET n 3 36 ASN n 3 37 GLY n 3 38 GLN n 3 39 ASN n 3 40 ARG n 3 41 PRO n 3 42 LEU n 3 43 ILE n 3 44 ARG n 3 45 PRO n 3 46 LYS n 3 47 LYS n 3 48 ARG n 3 49 MET n 3 50 ILE n 3 51 VAL n 3 52 SER n 3 53 LYS n 3 54 ARG n 3 55 ALA n 3 56 GLY n 3 57 THR n 3 58 GLN n 3 59 CYS n 3 60 THR n 3 61 ASN n 3 62 CYS n 3 63 GLN n 3 64 THR n 3 65 THR n 3 66 THR n 3 67 THR n 3 68 THR n 3 69 LEU n 3 70 TRP n 3 71 ARG n 3 72 ARG n 3 73 ASN n 3 74 ALA n 3 75 SER n 3 76 GLY n 3 77 ASP n 3 78 PRO n 3 79 VAL n 3 80 CYS n 3 81 ASN n 3 82 ALA n 3 83 CYS n 3 84 GLY n 3 85 LEU n 3 86 TYR n 3 87 PHE n 3 88 LYS n 3 89 LEU n 3 90 HIS n 3 91 GLN n 3 92 VAL n 3 93 ASN n 3 94 ARG n 3 95 PRO n 3 96 LEU n 3 97 THR n 3 98 MET n 3 99 ARG n 3 100 LYS n 3 101 ASP n 3 102 GLY n 3 103 ILE n 3 104 GLN n 3 105 THR n 3 106 ARG n 3 107 ASN n 3 108 ARG n 3 109 LYS n 3 110 ALA n 3 111 SER n 3 112 GLY n 3 113 LYS n 3 114 GLY n 3 115 LYS n 3 116 LYS n 3 117 LYS n 3 118 ARG n 3 119 GLY n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Gata1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta 2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'synthetic construct' ? 32630 'This sequence occurs naturally in humans' 2 1 sample ? ? 'synthetic construct' ? 32630 'This sequence occurs naturally in humans' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 PDB 3VEK 3VEK 1 TTGTCTTATCAGATGGACTC 1 ? 2 PDB 3VEK 3VEK 2 AAGAGTCCATCTGATAAGAC 21 ? 3 UNP GATA1_MOUSE P17679 3 ;EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLIRPKKRMIVSKRAGTQCTNCQTTTTTLWRRNASGDPVC NACGLYFKLHQVNRPLTMRKDGIQTRNRKASGKGKKKRG ; 200 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VEK A 1 ? 20 ? 3VEK 1 ? 20 ? 1 20 2 2 3VEK B 1 ? 20 ? 3VEK 21 ? 40 ? 21 40 3 3 3VEK C 1 ? 119 ? P17679 200 ? 318 ? 200 318 4 1 3VEK D 1 ? 20 ? 3VEK 1 ? 20 ? 1 20 5 2 3VEK E 1 ? 20 ? 3VEK 21 ? 40 ? 21 40 6 3 3VEK F 1 ? 119 ? P17679 200 ? 318 ? 200 318 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.entry_id 3VEK _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 1.374 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.52 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 51.25 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '20% PEG 6000, 0.01M ZnCl2, 0.1M MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2011-09-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'CONFOCAL MAXFLUX MIRRORS' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3VEK _reflns.d_resolution_high 2.630 _reflns.d_resolution_low 50.000 _reflns.number_obs 14526 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_netI_over_sigmaI 14.200 _reflns.pdbx_chi_squared 1.081 _reflns.pdbx_redundancy 4.700 _reflns.percent_possible_obs 97.000 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 14526 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.630 2.680 ? ? ? ? 0.373 ? ? 0.963 4.400 ? ? ? 718 ? ? ? ? 94.300 ? ? 1 1 2.680 2.720 ? ? ? ? 0.408 ? ? 1.087 4.600 ? ? ? 741 ? ? ? ? 96.100 ? ? 2 1 2.720 2.780 ? ? ? ? 0.524 ? ? 1.080 4.700 ? ? ? 684 ? ? ? ? 94.900 ? ? 3 1 2.780 2.830 ? ? ? ? 0.465 ? ? 1.070 4.700 ? ? ? 713 ? ? ? ? 96.200 ? ? 4 1 2.830 2.890 ? ? ? ? 0.398 ? ? 0.994 4.600 ? ? ? 715 ? ? ? ? 96.100 ? ? 5 1 2.890 2.960 ? ? ? ? 0.394 ? ? 1.074 4.700 ? ? ? 748 ? ? ? ? 95.800 ? ? 6 1 2.960 3.040 ? ? ? ? 0.337 ? ? 1.032 4.800 ? ? ? 684 ? ? ? ? 96.300 ? ? 7 1 3.040 3.120 ? ? ? ? 0.257 ? ? 1.066 4.800 ? ? ? 748 ? ? ? ? 96.600 ? ? 8 1 3.120 3.210 ? ? ? ? 0.127 ? ? 1.017 4.700 ? ? ? 715 ? ? ? ? 96.400 ? ? 9 1 3.210 3.310 ? ? ? ? 0.088 ? ? 1.008 4.800 ? ? ? 738 ? ? ? ? 96.900 ? ? 10 1 3.310 3.430 ? ? ? ? 0.122 ? ? 1.033 4.800 ? ? ? 719 ? ? ? ? 97.600 ? ? 11 1 3.430 3.570 ? ? ? ? 0.124 ? ? 1.011 4.800 ? ? ? 722 ? ? ? ? 97.400 ? ? 12 1 3.570 3.730 ? ? ? ? 0.112 ? ? 0.995 4.800 ? ? ? 713 ? ? ? ? 97.100 ? ? 13 1 3.730 3.930 ? ? ? ? 0.090 ? ? 0.960 4.800 ? ? ? 765 ? ? ? ? 97.800 ? ? 14 1 3.930 4.170 ? ? ? ? 0.080 ? ? 0.980 4.800 ? ? ? 730 ? ? ? ? 97.900 ? ? 15 1 4.170 4.500 ? ? ? ? 0.073 ? ? 1.027 4.800 ? ? ? 722 ? ? ? ? 98.200 ? ? 16 1 4.500 4.950 ? ? ? ? 0.069 ? ? 1.161 4.800 ? ? ? 747 ? ? ? ? 98.500 ? ? 17 1 4.950 5.660 ? ? ? ? 0.058 ? ? 1.276 4.800 ? ? ? 722 ? ? ? ? 98.500 ? ? 18 1 5.660 7.130 ? ? ? ? 0.051 ? ? 1.490 4.800 ? ? ? 752 ? ? ? ? 99.100 ? ? 19 1 7.130 50.000 ? ? ? ? 0.036 ? ? 1.277 4.700 ? ? ? 730 ? ? ? ? 98.100 ? ? 20 1 # _refine.entry_id 3VEK _refine.ls_d_res_high 2.6300 _refine.ls_d_res_low 48.68 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.3200 _refine.ls_number_reflns_obs 14469 _refine.ls_number_reflns_all 14469 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: WITH TLS ADDED' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2369 _refine.ls_R_factor_R_work 0.2349 _refine.ls_wR_factor_R_work 0.2462 _refine.ls_R_factor_R_free 0.2751 _refine.ls_wR_factor_R_free 0.2823 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 732 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 65.7281 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.1000 _refine.aniso_B[2][2] 4.3300 _refine.aniso_B[3][3] -4.8500 _refine.aniso_B[1][2] -1.2200 _refine.aniso_B[1][3] 0.5900 _refine.aniso_B[2][3] 1.2900 _refine.correlation_coeff_Fo_to_Fc 0.9220 _refine.correlation_coeff_Fo_to_Fc_free 0.8680 _refine.overall_SU_R_Cruickshank_DPI 1.0666 _refine.overall_SU_R_free 0.3568 _refine.pdbx_overall_ESU_R 1.0670 _refine.pdbx_overall_ESU_R_Free 0.3570 _refine.overall_SU_ML 0.3490 _refine.overall_SU_B 37.3800 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3VD6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7057 _refine.B_iso_max 138.110 _refine.B_iso_min 29.300 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1512 _refine_hist.pdbx_number_atoms_nucleic_acid 1628 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3154 _refine_hist.d_res_high 2.6300 _refine_hist.d_res_low 48.68 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 3362 0.004 0.021 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1808 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 4884 0.921 2.543 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4440 0.881 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 188 3.746 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 76 25.746 21.842 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 262 9.963 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 22 7.481 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 542 0.040 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2556 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 494 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 950 0.510 2.000 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 388 0.081 2.000 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1524 0.977 3.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 2412 1.250 4.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 3360 1.988 6.000 ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 'X-RAY DIFFRACTION' 1 1 'MEDIUM POSITIONAL' C 554 0.050 0.500 1 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 1 1 'MEDIUM THERMAL' C 554 0.080 2.000 2 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 'MEDIUM POSITIONAL' C 746 0.100 0.500 3 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 'MEDIUM THERMAL' C 746 0.120 2.000 4 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 'MEDIUM POSITIONAL' A 586 0.080 0.500 5 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 'MEDIUM THERMAL' A 586 0.130 2.000 6 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 'MEDIUM POSITIONAL' B 590 0.050 0.500 7 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 'MEDIUM THERMAL' B 590 0.190 2.000 8 ? ? ? ? ? ? # _refine_ls_shell.d_res_high 2.6280 _refine_ls_shell.d_res_low 2.6960 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 91.2300 _refine_ls_shell.number_reflns_R_work 963 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.4040 _refine_ls_shell.R_factor_R_free 0.4550 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1019 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 C 1 2 F 2 1 C 2 2 F 3 1 A 3 2 D 4 1 B 4 2 E # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 C ALA 2 . C SER 111 . C ALA 201 C SER 310 4 ? 1 2 1 F ALA 2 . F SER 111 . F ALA 201 F SER 310 4 ? 2 1 1 J ZN . . K ZN . . C ZN 401 C ZN 402 4 ? 2 2 1 P ZN . . Q ZN . . F ZN 401 F ZN 402 4 ? 3 1 1 A DT 1 . A DC 20 . A DT 1 A DC 20 4 ? 3 2 1 D DT 1 . D DC 20 . D DT 1 D DC 20 4 ? 4 1 1 B DA 1 . B DC 20 . B DA 21 B DC 40 4 ? 4 2 1 E DA 1 . E DC 20 . E DA 21 E DC 40 4 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? 4 ? # _struct.entry_id 3VEK _struct.title 'Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P1 Crystal Form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VEK _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, ZINC FINGER, TRANSCRIPTION FACTOR, DNA BINDING, NUCLEUS, TRANSCRIPTION-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS C 26 ? GLY C 37 ? CYS C 225 GLY C 236 1 ? 12 HELX_P HELX_P2 2 CYS C 80 ? GLN C 91 ? CYS C 279 GLN C 290 1 ? 12 HELX_P HELX_P3 3 PRO C 95 ? ARG C 99 ? PRO C 294 ARG C 298 5 ? 5 HELX_P HELX_P4 4 CYS F 26 ? GLY F 37 ? CYS F 225 GLY F 236 1 ? 12 HELX_P HELX_P5 5 CYS F 80 ? GLN F 91 ? CYS F 279 GLN F 290 1 ? 12 HELX_P HELX_P6 6 PRO F 95 ? ARG F 99 ? PRO F 294 ARG F 298 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DT 6 OP1 ? ? ? 1_555 G ZN . ZN ? ? A DT 6 A ZN 101 1_555 ? ? ? ? ? ? ? 2.265 ? ? metalc2 metalc ? ? A DG 15 N7 ? ? ? 1_555 H ZN . ZN ? ? A DG 15 A ZN 102 1_555 ? ? ? ? ? ? ? 2.296 ? ? metalc3 metalc ? ? G ZN . ZN ? ? ? 1_555 C HIS 90 NE2 ? ? A ZN 101 C HIS 289 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc4 metalc ? ? B DG 18 N7 ? ? ? 1_555 I ZN . ZN ? ? B DG 38 B ZN 101 1_555 ? ? ? ? ? ? ? 2.521 ? ? metalc5 metalc ? ? C CYS 5 SG ? ? ? 1_555 J ZN . ZN ? ? C CYS 204 C ZN 401 1_555 ? ? ? ? ? ? ? 2.466 ? ? metalc6 metalc ? ? C CYS 8 SG ? ? ? 1_555 J ZN . ZN ? ? C CYS 207 C ZN 401 1_555 ? ? ? ? ? ? ? 2.073 ? ? metalc7 metalc ? ? C ASP 19 OD2 ? ? ? 1_555 L ZN . ZN ? ? C ASP 218 C ZN 403 1_555 ? ? ? ? ? ? ? 2.525 ? ? metalc8 metalc ? ? C HIS 23 ND1 ? ? ? 1_555 L ZN . ZN ? ? C HIS 222 C ZN 403 1_555 ? ? ? ? ? ? ? 2.283 ? ? metalc9 metalc ? ? C CYS 26 SG ? ? ? 1_555 J ZN . ZN ? ? C CYS 225 C ZN 401 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc10 metalc ? ? C CYS 29 SG ? ? ? 1_555 J ZN . ZN ? ? C CYS 228 C ZN 401 1_555 ? ? ? ? ? ? ? 2.117 ? ? metalc11 metalc ? ? C CYS 59 SG ? ? ? 1_555 K ZN . ZN ? ? C CYS 258 C ZN 402 1_555 ? ? ? ? ? ? ? 2.541 ? ? metalc12 metalc ? ? C CYS 62 SG ? ? ? 1_555 K ZN . ZN ? ? C CYS 261 C ZN 402 1_555 ? ? ? ? ? ? ? 2.258 ? ? metalc13 metalc ? ? C CYS 80 SG ? ? ? 1_555 K ZN . ZN ? ? C CYS 279 C ZN 402 1_555 ? ? ? ? ? ? ? 2.500 ? ? metalc14 metalc ? ? C CYS 83 SG ? ? ? 1_555 K ZN . ZN ? ? C CYS 282 C ZN 402 1_555 ? ? ? ? ? ? ? 2.437 ? ? metalc15 metalc ? ? D DT 6 OP1 ? ? ? 1_555 M ZN . ZN ? ? D DT 6 D ZN 101 1_555 ? ? ? ? ? ? ? 2.510 ? ? metalc16 metalc ? ? D DT 6 OP2 ? ? ? 1_555 M ZN . ZN ? ? D DT 6 D ZN 101 1_555 ? ? ? ? ? ? ? 2.576 ? ? metalc17 metalc ? ? D DG 15 N7 ? ? ? 1_555 N ZN . ZN ? ? D DG 15 D ZN 102 1_555 ? ? ? ? ? ? ? 2.241 ? ? metalc18 metalc ? ? M ZN . ZN ? ? ? 1_555 F HIS 90 NE2 ? ? D ZN 101 F HIS 289 1_555 ? ? ? ? ? ? ? 2.177 ? ? metalc19 metalc ? ? E DG 18 N7 ? ? ? 1_555 O ZN . ZN ? ? E DG 38 E ZN 101 1_555 ? ? ? ? ? ? ? 2.387 ? ? metalc20 metalc ? ? F GLU 4 OE1 ? ? ? 1_555 S ZN . ZN ? ? F GLU 203 F ZN 404 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc21 metalc ? ? F CYS 5 SG ? ? ? 1_555 P ZN . ZN ? ? F CYS 204 F ZN 401 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc22 metalc ? ? F CYS 8 SG ? ? ? 1_555 P ZN . ZN ? ? F CYS 207 F ZN 401 1_555 ? ? ? ? ? ? ? 2.088 ? ? metalc23 metalc ? ? F ASP 19 OD2 ? ? ? 1_555 T ZN . ZN ? ? F ASP 218 F ZN 405 1_555 ? ? ? ? ? ? ? 2.474 ? ? metalc24 metalc ? ? F HIS 23 ND1 ? ? ? 1_555 T ZN . ZN ? ? F HIS 222 F ZN 405 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc25 metalc ? ? F CYS 26 SG ? ? ? 1_555 P ZN . ZN ? ? F CYS 225 F ZN 401 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc26 metalc ? ? F CYS 29 SG ? ? ? 1_555 P ZN . ZN ? ? F CYS 228 F ZN 401 1_555 ? ? ? ? ? ? ? 2.082 ? ? metalc27 metalc ? ? F HIS 33 NE2 ? ? ? 1_555 R ZN . ZN ? ? F HIS 232 F ZN 403 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc28 metalc ? ? F CYS 59 SG ? ? ? 1_555 Q ZN . ZN ? ? F CYS 258 F ZN 402 1_555 ? ? ? ? ? ? ? 2.340 ? ? metalc29 metalc ? ? F CYS 62 SG ? ? ? 1_555 Q ZN . ZN ? ? F CYS 261 F ZN 402 1_555 ? ? ? ? ? ? ? 2.085 ? ? metalc30 metalc ? ? F CYS 80 SG ? ? ? 1_555 Q ZN . ZN ? ? F CYS 279 F ZN 402 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc31 metalc ? ? F CYS 83 SG ? ? ? 1_555 Q ZN . ZN ? ? F CYS 282 F ZN 402 1_555 ? ? ? ? ? ? ? 2.394 ? ? hydrog1 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 20 O2 ? ? A DG 3 B DC 40 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog2 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 19 N1 ? ? A DT 4 B DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 19 N6 ? ? A DT 4 B DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 18 N1 ? ? A DC 5 B DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 18 O6 ? ? A DC 5 B DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 18 N2 ? ? A DC 5 B DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 17 N1 ? ? A DT 6 B DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 17 N6 ? ? A DT 6 B DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 16 N1 ? ? A DT 7 B DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 16 N6 ? ? A DT 7 B DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 15 N3 ? ? A DA 8 B DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 15 O4 ? ? A DA 8 B DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 14 N1 ? ? A DT 9 B DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 14 N6 ? ? A DT 9 B DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 13 N1 ? ? A DC 10 B DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 13 O6 ? ? A DC 10 B DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 13 N2 ? ? A DC 10 B DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 12 N3 ? ? A DA 11 B DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 12 O4 ? ? A DA 11 B DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 12 B DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 12 B DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 12 B DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 10 N3 ? ? A DA 13 B DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 10 O4 ? ? A DA 13 B DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 14 N3 ? ? ? 1_555 B DA 9 N1 ? ? A DT 14 B DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 14 O4 ? ? ? 1_555 B DA 9 N6 ? ? A DT 14 B DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 15 B DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 15 B DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 15 B DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 16 B DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 16 B DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 16 B DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 17 B DT 26 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog34 hydrog ? ? A DC 18 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 18 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 18 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 18 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 18 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 18 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DT 19 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 19 B DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 19 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 19 B DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 20 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 20 B DG 23 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog40 hydrog ? ? D DG 3 N1 ? ? ? 1_555 E DC 20 O2 ? ? D DG 3 E DC 40 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog41 hydrog ? ? D DT 4 N3 ? ? ? 1_555 E DA 19 N1 ? ? D DT 4 E DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? D DT 4 O4 ? ? ? 1_555 E DA 19 N6 ? ? D DT 4 E DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? D DC 5 N3 ? ? ? 1_555 E DG 18 N1 ? ? D DC 5 E DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? D DC 5 N4 ? ? ? 1_555 E DG 18 O6 ? ? D DC 5 E DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? D DC 5 O2 ? ? ? 1_555 E DG 18 N2 ? ? D DC 5 E DG 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? D DT 6 N3 ? ? ? 1_555 E DA 17 N1 ? ? D DT 6 E DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? D DT 6 O4 ? ? ? 1_555 E DA 17 N6 ? ? D DT 6 E DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? D DT 7 N3 ? ? ? 1_555 E DA 16 N1 ? ? D DT 7 E DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? D DT 7 O4 ? ? ? 1_555 E DA 16 N6 ? ? D DT 7 E DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? D DA 8 N1 ? ? ? 1_555 E DT 15 N3 ? ? D DA 8 E DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? D DA 8 N6 ? ? ? 1_555 E DT 15 O4 ? ? D DA 8 E DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? D DT 9 N3 ? ? ? 1_555 E DA 14 N1 ? ? D DT 9 E DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? D DT 9 O4 ? ? ? 1_555 E DA 14 N6 ? ? D DT 9 E DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? D DC 10 N3 ? ? ? 1_555 E DG 13 N1 ? ? D DC 10 E DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? D DC 10 N4 ? ? ? 1_555 E DG 13 O6 ? ? D DC 10 E DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? D DC 10 O2 ? ? ? 1_555 E DG 13 N2 ? ? D DC 10 E DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? D DA 11 N1 ? ? ? 1_555 E DT 12 N3 ? ? D DA 11 E DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? D DA 11 N6 ? ? ? 1_555 E DT 12 O4 ? ? D DA 11 E DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? D DG 12 N1 ? ? ? 1_555 E DC 11 N3 ? ? D DG 12 E DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? D DG 12 N2 ? ? ? 1_555 E DC 11 O2 ? ? D DG 12 E DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? D DG 12 O6 ? ? ? 1_555 E DC 11 N4 ? ? D DG 12 E DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? D DA 13 N1 ? ? ? 1_555 E DT 10 N3 ? ? D DA 13 E DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? D DA 13 N6 ? ? ? 1_555 E DT 10 O4 ? ? D DA 13 E DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? D DT 14 N3 ? ? ? 1_555 E DA 9 N1 ? ? D DT 14 E DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? D DT 14 O4 ? ? ? 1_555 E DA 9 N6 ? ? D DT 14 E DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? D DG 15 N1 ? ? ? 1_555 E DC 8 N3 ? ? D DG 15 E DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? D DG 15 N2 ? ? ? 1_555 E DC 8 O2 ? ? D DG 15 E DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? D DG 15 O6 ? ? ? 1_555 E DC 8 N4 ? ? D DG 15 E DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? D DG 16 N1 ? ? ? 1_555 E DC 7 N3 ? ? D DG 16 E DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? D DG 16 N2 ? ? ? 1_555 E DC 7 O2 ? ? D DG 16 E DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? D DG 16 O6 ? ? ? 1_555 E DC 7 N4 ? ? D DG 16 E DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? D DA 17 N1 ? ? ? 1_555 E DT 6 N3 ? ? D DA 17 E DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? D DA 17 N6 ? ? ? 1_555 E DT 6 O4 ? ? D DA 17 E DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? D DC 18 N3 ? ? ? 1_555 E DG 5 N1 ? ? D DC 18 E DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? D DC 18 N4 ? ? ? 1_555 E DG 5 O6 ? ? D DC 18 E DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? D DC 18 O2 ? ? ? 1_555 E DG 5 N2 ? ? D DC 18 E DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? D DT 19 N3 ? ? ? 1_555 E DA 4 N1 ? ? D DT 19 E DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? D DT 19 O4 ? ? ? 1_555 E DA 4 N6 ? ? D DT 19 E DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? D DC 20 O2 ? ? ? 1_555 E DG 3 N2 ? ? D DC 20 E DG 23 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG C 17 ? ARG C 18 ? ARG C 216 ARG C 217 A 2 TYR C 24 ? LEU C 25 ? TYR C 223 LEU C 224 B 1 ARG C 71 ? ARG C 72 ? ARG C 270 ARG C 271 B 2 PRO C 78 ? VAL C 79 ? PRO C 277 VAL C 278 C 1 ARG F 17 ? ARG F 18 ? ARG F 216 ARG F 217 C 2 TYR F 24 ? LEU F 25 ? TYR F 223 LEU F 224 D 1 ARG F 71 ? ARG F 72 ? ARG F 270 ARG F 271 D 2 PRO F 78 ? VAL F 79 ? PRO F 277 VAL F 278 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG C 17 ? N ARG C 216 O LEU C 25 ? O LEU C 224 B 1 2 N ARG C 71 ? N ARG C 270 O VAL C 79 ? O VAL C 278 C 1 2 N ARG F 17 ? N ARG F 216 O LEU F 25 ? O LEU F 224 D 1 2 N ARG F 71 ? N ARG F 270 O VAL F 79 ? O VAL F 278 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 101 ? 4 'BINDING SITE FOR RESIDUE ZN A 101' AC2 Software A ZN 102 ? 1 'BINDING SITE FOR RESIDUE ZN A 102' AC3 Software B ZN 101 ? 1 'BINDING SITE FOR RESIDUE ZN B 101' AC4 Software C ZN 401 ? 4 'BINDING SITE FOR RESIDUE ZN C 401' AC5 Software C ZN 402 ? 4 'BINDING SITE FOR RESIDUE ZN C 402' AC6 Software C ZN 403 ? 3 'BINDING SITE FOR RESIDUE ZN C 403' AC7 Software D ZN 101 ? 3 'BINDING SITE FOR RESIDUE ZN D 101' AC8 Software D ZN 102 ? 1 'BINDING SITE FOR RESIDUE ZN D 102' AC9 Software E ZN 101 ? 1 'BINDING SITE FOR RESIDUE ZN E 101' BC1 Software F ZN 401 ? 4 'BINDING SITE FOR RESIDUE ZN F 401' BC2 Software F ZN 402 ? 4 'BINDING SITE FOR RESIDUE ZN F 402' BC3 Software F ZN 403 ? 2 'BINDING SITE FOR RESIDUE ZN F 403' BC4 Software F ZN 404 ? 2 'BINDING SITE FOR RESIDUE ZN F 404' BC5 Software F ZN 405 ? 3 'BINDING SITE FOR RESIDUE ZN F 405' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 DC A 5 ? DC A 5 . ? 1_555 ? 2 AC1 4 DT A 6 ? DT A 6 . ? 1_555 ? 3 AC1 4 HIS C 90 ? HIS C 289 . ? 1_555 ? 4 AC1 4 ASP F 101 ? ASP F 300 . ? 1_654 ? 5 AC2 1 DG A 15 ? DG A 15 . ? 1_555 ? 6 AC3 1 DG B 18 ? DG B 38 . ? 1_555 ? 7 AC4 4 CYS C 5 ? CYS C 204 . ? 1_555 ? 8 AC4 4 CYS C 8 ? CYS C 207 . ? 1_555 ? 9 AC4 4 CYS C 26 ? CYS C 225 . ? 1_555 ? 10 AC4 4 CYS C 29 ? CYS C 228 . ? 1_555 ? 11 AC5 4 CYS C 59 ? CYS C 258 . ? 1_555 ? 12 AC5 4 CYS C 62 ? CYS C 261 . ? 1_555 ? 13 AC5 4 CYS C 80 ? CYS C 279 . ? 1_555 ? 14 AC5 4 CYS C 83 ? CYS C 282 . ? 1_555 ? 15 AC6 3 ASP C 19 ? ASP C 218 . ? 1_555 ? 16 AC6 3 THR C 21 ? THR C 220 . ? 1_555 ? 17 AC6 3 HIS C 23 ? HIS C 222 . ? 1_555 ? 18 AC7 3 ASP C 101 ? ASP C 300 . ? 1_556 ? 19 AC7 3 DT D 6 ? DT D 6 . ? 1_555 ? 20 AC7 3 HIS F 90 ? HIS F 289 . ? 1_555 ? 21 AC8 1 DG D 15 ? DG D 15 . ? 1_555 ? 22 AC9 1 DG E 18 ? DG E 38 . ? 1_555 ? 23 BC1 4 CYS F 5 ? CYS F 204 . ? 1_555 ? 24 BC1 4 CYS F 8 ? CYS F 207 . ? 1_555 ? 25 BC1 4 CYS F 26 ? CYS F 225 . ? 1_555 ? 26 BC1 4 CYS F 29 ? CYS F 228 . ? 1_555 ? 27 BC2 4 CYS F 59 ? CYS F 258 . ? 1_555 ? 28 BC2 4 CYS F 62 ? CYS F 261 . ? 1_555 ? 29 BC2 4 CYS F 80 ? CYS F 279 . ? 1_555 ? 30 BC2 4 CYS F 83 ? CYS F 282 . ? 1_555 ? 31 BC3 2 GLU C 4 ? GLU C 203 . ? 1_565 ? 32 BC3 2 HIS F 33 ? HIS F 232 . ? 1_555 ? 33 BC4 2 HIS C 33 ? HIS C 232 . ? 1_465 ? 34 BC4 2 GLU F 4 ? GLU F 203 . ? 1_555 ? 35 BC5 3 ASP F 19 ? ASP F 218 . ? 1_555 ? 36 BC5 3 THR F 21 ? THR F 220 . ? 1_555 ? 37 BC5 3 HIS F 23 ? HIS F 222 . ? 1_555 ? # _atom_sites.entry_id 3VEK _atom_sites.fract_transf_matrix[1][1] 0.028413 _atom_sites.fract_transf_matrix[1][2] -0.008349 _atom_sites.fract_transf_matrix[1][3] -0.005970 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016699 _atom_sites.fract_transf_matrix[2][3] -0.004239 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016205 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DA 8 8 8 DA DA A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DC 10 10 10 DC DC A . n A 1 11 DA 11 11 11 DA DA A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DA 13 13 13 DA DA A . n A 1 14 DT 14 14 14 DT DT A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DA 17 17 17 DA DA A . n A 1 18 DC 18 18 18 DC DC A . n A 1 19 DT 19 19 19 DT DT A . n A 1 20 DC 20 20 20 DC DC A . n B 2 1 DA 1 21 21 DA DA B . n B 2 2 DA 2 22 22 DA DA B . n B 2 3 DG 3 23 23 DG DG B . n B 2 4 DA 4 24 24 DA DA B . n B 2 5 DG 5 25 25 DG DG B . n B 2 6 DT 6 26 26 DT DT B . n B 2 7 DC 7 27 27 DC DC B . n B 2 8 DC 8 28 28 DC DC B . n B 2 9 DA 9 29 29 DA DA B . n B 2 10 DT 10 30 30 DT DT B . n B 2 11 DC 11 31 31 DC DC B . n B 2 12 DT 12 32 32 DT DT B . n B 2 13 DG 13 33 33 DG DG B . n B 2 14 DA 14 34 34 DA DA B . n B 2 15 DT 15 35 35 DT DT B . n B 2 16 DA 16 36 36 DA DA B . n B 2 17 DA 17 37 37 DA DA B . n B 2 18 DG 18 38 38 DG DG B . n B 2 19 DA 19 39 39 DA DA B . n B 2 20 DC 20 40 40 DC DC B . n C 3 1 GLU 1 200 ? ? ? C . n C 3 2 ALA 2 201 201 ALA ALA C . n C 3 3 ARG 3 202 202 ARG ARG C . n C 3 4 GLU 4 203 203 GLU GLU C . n C 3 5 CYS 5 204 204 CYS CYS C . n C 3 6 VAL 6 205 205 VAL VAL C . n C 3 7 ASN 7 206 206 ASN ASN C . n C 3 8 CYS 8 207 207 CYS CYS C . n C 3 9 GLY 9 208 208 GLY GLY C . n C 3 10 ALA 10 209 209 ALA ALA C . n C 3 11 THR 11 210 210 THR THR C . n C 3 12 ALA 12 211 211 ALA ALA C . n C 3 13 THR 13 212 212 THR THR C . n C 3 14 PRO 14 213 213 PRO PRO C . n C 3 15 LEU 15 214 214 LEU LEU C . n C 3 16 TRP 16 215 215 TRP TRP C . n C 3 17 ARG 17 216 216 ARG ARG C . n C 3 18 ARG 18 217 217 ARG ARG C . n C 3 19 ASP 19 218 218 ASP ASP C . n C 3 20 ARG 20 219 219 ARG ARG C . n C 3 21 THR 21 220 220 THR THR C . n C 3 22 GLY 22 221 221 GLY GLY C . n C 3 23 HIS 23 222 222 HIS HIS C . n C 3 24 TYR 24 223 223 TYR TYR C . n C 3 25 LEU 25 224 224 LEU LEU C . n C 3 26 CYS 26 225 225 CYS CYS C . n C 3 27 ASN 27 226 226 ASN ASN C . n C 3 28 ALA 28 227 227 ALA ALA C . n C 3 29 CYS 29 228 228 CYS CYS C . n C 3 30 GLY 30 229 229 GLY GLY C . n C 3 31 LEU 31 230 230 LEU LEU C . n C 3 32 TYR 32 231 231 TYR TYR C . n C 3 33 HIS 33 232 232 HIS HIS C . n C 3 34 LYS 34 233 233 LYS LYS C . n C 3 35 MET 35 234 234 MET MET C . n C 3 36 ASN 36 235 235 ASN ASN C . n C 3 37 GLY 37 236 236 GLY GLY C . n C 3 38 GLN 38 237 237 GLN GLN C . n C 3 39 ASN 39 238 238 ASN ASN C . n C 3 40 ARG 40 239 239 ARG ARG C . n C 3 41 PRO 41 240 240 PRO PRO C . n C 3 42 LEU 42 241 241 LEU LEU C . n C 3 43 ILE 43 242 ? ? ? C . n C 3 44 ARG 44 243 ? ? ? C . n C 3 45 PRO 45 244 ? ? ? C . n C 3 46 LYS 46 245 ? ? ? C . n C 3 47 LYS 47 246 ? ? ? C . n C 3 48 ARG 48 247 ? ? ? C . n C 3 49 MET 49 248 ? ? ? C . n C 3 50 ILE 50 249 ? ? ? C . n C 3 51 VAL 51 250 ? ? ? C . n C 3 52 SER 52 251 ? ? ? C . n C 3 53 LYS 53 252 ? ? ? C . n C 3 54 ARG 54 253 ? ? ? C . n C 3 55 ALA 55 254 ? ? ? C . n C 3 56 GLY 56 255 ? ? ? C . n C 3 57 THR 57 256 256 THR THR C . n C 3 58 GLN 58 257 257 GLN GLN C . n C 3 59 CYS 59 258 258 CYS CYS C . n C 3 60 THR 60 259 259 THR THR C . n C 3 61 ASN 61 260 260 ASN ASN C . n C 3 62 CYS 62 261 261 CYS CYS C . n C 3 63 GLN 63 262 262 GLN GLN C . n C 3 64 THR 64 263 263 THR THR C . n C 3 65 THR 65 264 264 THR THR C . n C 3 66 THR 66 265 265 THR THR C . n C 3 67 THR 67 266 266 THR THR C . n C 3 68 THR 68 267 267 THR THR C . n C 3 69 LEU 69 268 268 LEU LEU C . n C 3 70 TRP 70 269 269 TRP TRP C . n C 3 71 ARG 71 270 270 ARG ARG C . n C 3 72 ARG 72 271 271 ARG ARG C . n C 3 73 ASN 73 272 272 ASN ASN C . n C 3 74 ALA 74 273 273 ALA ALA C . n C 3 75 SER 75 274 274 SER SER C . n C 3 76 GLY 76 275 275 GLY GLY C . n C 3 77 ASP 77 276 276 ASP ASP C . n C 3 78 PRO 78 277 277 PRO PRO C . n C 3 79 VAL 79 278 278 VAL VAL C . n C 3 80 CYS 80 279 279 CYS CYS C . n C 3 81 ASN 81 280 280 ASN ASN C . n C 3 82 ALA 82 281 281 ALA ALA C . n C 3 83 CYS 83 282 282 CYS CYS C . n C 3 84 GLY 84 283 283 GLY GLY C . n C 3 85 LEU 85 284 284 LEU LEU C . n C 3 86 TYR 86 285 285 TYR TYR C . n C 3 87 PHE 87 286 286 PHE PHE C . n C 3 88 LYS 88 287 287 LYS LYS C . n C 3 89 LEU 89 288 288 LEU LEU C . n C 3 90 HIS 90 289 289 HIS HIS C . n C 3 91 GLN 91 290 290 GLN GLN C . n C 3 92 VAL 92 291 291 VAL VAL C . n C 3 93 ASN 93 292 292 ASN ASN C . n C 3 94 ARG 94 293 293 ARG ARG C . n C 3 95 PRO 95 294 294 PRO PRO C . n C 3 96 LEU 96 295 295 LEU LEU C . n C 3 97 THR 97 296 296 THR THR C . n C 3 98 MET 98 297 297 MET MET C . n C 3 99 ARG 99 298 298 ARG ARG C . n C 3 100 LYS 100 299 299 LYS LYS C . n C 3 101 ASP 101 300 300 ASP ASP C . n C 3 102 GLY 102 301 301 GLY GLY C . n C 3 103 ILE 103 302 302 ILE ILE C . n C 3 104 GLN 104 303 303 GLN GLN C . n C 3 105 THR 105 304 304 THR THR C . n C 3 106 ARG 106 305 305 ARG ARG C . n C 3 107 ASN 107 306 306 ASN ASN C . n C 3 108 ARG 108 307 307 ARG ARG C . n C 3 109 LYS 109 308 308 LYS LYS C . n C 3 110 ALA 110 309 309 ALA ALA C . n C 3 111 SER 111 310 310 SER SER C . n C 3 112 GLY 112 311 ? ? ? C . n C 3 113 LYS 113 312 ? ? ? C . n C 3 114 GLY 114 313 ? ? ? C . n C 3 115 LYS 115 314 ? ? ? C . n C 3 116 LYS 116 315 ? ? ? C . n C 3 117 LYS 117 316 ? ? ? C . n C 3 118 ARG 118 317 ? ? ? C . n C 3 119 GLY 119 318 ? ? ? C . n D 1 1 DT 1 1 1 DT DT D . n D 1 2 DT 2 2 2 DT DT D . n D 1 3 DG 3 3 3 DG DG D . n D 1 4 DT 4 4 4 DT DT D . n D 1 5 DC 5 5 5 DC DC D . n D 1 6 DT 6 6 6 DT DT D . n D 1 7 DT 7 7 7 DT DT D . n D 1 8 DA 8 8 8 DA DA D . n D 1 9 DT 9 9 9 DT DT D . n D 1 10 DC 10 10 10 DC DC D . n D 1 11 DA 11 11 11 DA DA D . n D 1 12 DG 12 12 12 DG DG D . n D 1 13 DA 13 13 13 DA DA D . n D 1 14 DT 14 14 14 DT DT D . n D 1 15 DG 15 15 15 DG DG D . n D 1 16 DG 16 16 16 DG DG D . n D 1 17 DA 17 17 17 DA DA D . n D 1 18 DC 18 18 18 DC DC D . n D 1 19 DT 19 19 19 DT DT D . n D 1 20 DC 20 20 20 DC DC D . n E 2 1 DA 1 21 21 DA DA E . n E 2 2 DA 2 22 22 DA DA E . n E 2 3 DG 3 23 23 DG DG E . n E 2 4 DA 4 24 24 DA DA E . n E 2 5 DG 5 25 25 DG DG E . n E 2 6 DT 6 26 26 DT DT E . n E 2 7 DC 7 27 27 DC DC E . n E 2 8 DC 8 28 28 DC DC E . n E 2 9 DA 9 29 29 DA DA E . n E 2 10 DT 10 30 30 DT DT E . n E 2 11 DC 11 31 31 DC DC E . n E 2 12 DT 12 32 32 DT DT E . n E 2 13 DG 13 33 33 DG DG E . n E 2 14 DA 14 34 34 DA DA E . n E 2 15 DT 15 35 35 DT DT E . n E 2 16 DA 16 36 36 DA DA E . n E 2 17 DA 17 37 37 DA DA E . n E 2 18 DG 18 38 38 DG DG E . n E 2 19 DA 19 39 39 DA DA E . n E 2 20 DC 20 40 40 DC DC E . n F 3 1 GLU 1 200 ? ? ? F . n F 3 2 ALA 2 201 201 ALA ALA F . n F 3 3 ARG 3 202 202 ARG ARG F . n F 3 4 GLU 4 203 203 GLU GLU F . n F 3 5 CYS 5 204 204 CYS CYS F . n F 3 6 VAL 6 205 205 VAL VAL F . n F 3 7 ASN 7 206 206 ASN ASN F . n F 3 8 CYS 8 207 207 CYS CYS F . n F 3 9 GLY 9 208 208 GLY GLY F . n F 3 10 ALA 10 209 209 ALA ALA F . n F 3 11 THR 11 210 210 THR THR F . n F 3 12 ALA 12 211 211 ALA ALA F . n F 3 13 THR 13 212 212 THR THR F . n F 3 14 PRO 14 213 213 PRO PRO F . n F 3 15 LEU 15 214 214 LEU LEU F . n F 3 16 TRP 16 215 215 TRP TRP F . n F 3 17 ARG 17 216 216 ARG ARG F . n F 3 18 ARG 18 217 217 ARG ARG F . n F 3 19 ASP 19 218 218 ASP ASP F . n F 3 20 ARG 20 219 219 ARG ARG F . n F 3 21 THR 21 220 220 THR THR F . n F 3 22 GLY 22 221 221 GLY GLY F . n F 3 23 HIS 23 222 222 HIS HIS F . n F 3 24 TYR 24 223 223 TYR TYR F . n F 3 25 LEU 25 224 224 LEU LEU F . n F 3 26 CYS 26 225 225 CYS CYS F . n F 3 27 ASN 27 226 226 ASN ASN F . n F 3 28 ALA 28 227 227 ALA ALA F . n F 3 29 CYS 29 228 228 CYS CYS F . n F 3 30 GLY 30 229 229 GLY GLY F . n F 3 31 LEU 31 230 230 LEU LEU F . n F 3 32 TYR 32 231 231 TYR TYR F . n F 3 33 HIS 33 232 232 HIS HIS F . n F 3 34 LYS 34 233 233 LYS LYS F . n F 3 35 MET 35 234 234 MET MET F . n F 3 36 ASN 36 235 235 ASN ASN F . n F 3 37 GLY 37 236 236 GLY GLY F . n F 3 38 GLN 38 237 237 GLN GLN F . n F 3 39 ASN 39 238 238 ASN ASN F . n F 3 40 ARG 40 239 239 ARG ARG F . n F 3 41 PRO 41 240 240 PRO PRO F . n F 3 42 LEU 42 241 241 LEU LEU F . n F 3 43 ILE 43 242 ? ? ? F . n F 3 44 ARG 44 243 ? ? ? F . n F 3 45 PRO 45 244 ? ? ? F . n F 3 46 LYS 46 245 ? ? ? F . n F 3 47 LYS 47 246 ? ? ? F . n F 3 48 ARG 48 247 ? ? ? F . n F 3 49 MET 49 248 ? ? ? F . n F 3 50 ILE 50 249 ? ? ? F . n F 3 51 VAL 51 250 ? ? ? F . n F 3 52 SER 52 251 ? ? ? F . n F 3 53 LYS 53 252 ? ? ? F . n F 3 54 ARG 54 253 ? ? ? F . n F 3 55 ALA 55 254 ? ? ? F . n F 3 56 GLY 56 255 ? ? ? F . n F 3 57 THR 57 256 256 THR THR F . n F 3 58 GLN 58 257 257 GLN GLN F . n F 3 59 CYS 59 258 258 CYS CYS F . n F 3 60 THR 60 259 259 THR THR F . n F 3 61 ASN 61 260 260 ASN ASN F . n F 3 62 CYS 62 261 261 CYS CYS F . n F 3 63 GLN 63 262 262 GLN GLN F . n F 3 64 THR 64 263 263 THR THR F . n F 3 65 THR 65 264 264 THR THR F . n F 3 66 THR 66 265 265 THR THR F . n F 3 67 THR 67 266 266 THR THR F . n F 3 68 THR 68 267 267 THR THR F . n F 3 69 LEU 69 268 268 LEU LEU F . n F 3 70 TRP 70 269 269 TRP TRP F . n F 3 71 ARG 71 270 270 ARG ARG F . n F 3 72 ARG 72 271 271 ARG ARG F . n F 3 73 ASN 73 272 272 ASN ASN F . n F 3 74 ALA 74 273 273 ALA ALA F . n F 3 75 SER 75 274 274 SER SER F . n F 3 76 GLY 76 275 275 GLY GLY F . n F 3 77 ASP 77 276 276 ASP ASP F . n F 3 78 PRO 78 277 277 PRO PRO F . n F 3 79 VAL 79 278 278 VAL VAL F . n F 3 80 CYS 80 279 279 CYS CYS F . n F 3 81 ASN 81 280 280 ASN ASN F . n F 3 82 ALA 82 281 281 ALA ALA F . n F 3 83 CYS 83 282 282 CYS CYS F . n F 3 84 GLY 84 283 283 GLY GLY F . n F 3 85 LEU 85 284 284 LEU LEU F . n F 3 86 TYR 86 285 285 TYR TYR F . n F 3 87 PHE 87 286 286 PHE PHE F . n F 3 88 LYS 88 287 287 LYS LYS F . n F 3 89 LEU 89 288 288 LEU LEU F . n F 3 90 HIS 90 289 289 HIS HIS F . n F 3 91 GLN 91 290 290 GLN GLN F . n F 3 92 VAL 92 291 291 VAL VAL F . n F 3 93 ASN 93 292 292 ASN ASN F . n F 3 94 ARG 94 293 293 ARG ARG F . n F 3 95 PRO 95 294 294 PRO PRO F . n F 3 96 LEU 96 295 295 LEU LEU F . n F 3 97 THR 97 296 296 THR THR F . n F 3 98 MET 98 297 297 MET MET F . n F 3 99 ARG 99 298 298 ARG ARG F . n F 3 100 LYS 100 299 299 LYS LYS F . n F 3 101 ASP 101 300 300 ASP ASP F . n F 3 102 GLY 102 301 301 GLY GLY F . n F 3 103 ILE 103 302 302 ILE ILE F . n F 3 104 GLN 104 303 303 GLN GLN F . n F 3 105 THR 105 304 304 THR THR F . n F 3 106 ARG 106 305 305 ARG ARG F . n F 3 107 ASN 107 306 306 ASN ASN F . n F 3 108 ARG 108 307 307 ARG ARG F . n F 3 109 LYS 109 308 308 LYS LYS F . n F 3 110 ALA 110 309 309 ALA ALA F . n F 3 111 SER 111 310 310 SER SER F . n F 3 112 GLY 112 311 ? ? ? F . n F 3 113 LYS 113 312 ? ? ? F . n F 3 114 GLY 114 313 ? ? ? F . n F 3 115 LYS 115 314 ? ? ? F . n F 3 116 LYS 116 315 ? ? ? F . n F 3 117 LYS 117 316 ? ? ? F . n F 3 118 ARG 118 317 ? ? ? F . n F 3 119 GLY 119 318 ? ? ? F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ZN 1 101 5 ZN ZN A . H 4 ZN 1 102 6 ZN ZN A . I 4 ZN 1 101 4 ZN ZN B . J 4 ZN 1 401 500 ZN ZN C . K 4 ZN 1 402 501 ZN ZN C . L 4 ZN 1 403 7 ZN ZN C . M 4 ZN 1 101 8 ZN ZN D . N 4 ZN 1 102 9 ZN ZN D . O 4 ZN 1 101 3 ZN ZN E . P 4 ZN 1 401 500 ZN ZN F . Q 4 ZN 1 402 501 ZN ZN F . R 4 ZN 1 403 1 ZN ZN F . S 4 ZN 1 404 2 ZN ZN F . T 4 ZN 1 405 10 ZN ZN F . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,I,J,K,L 2 1 D,E,F,M,N,O,P,Q,R,S,T # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5660 ? 1 MORE -157 ? 1 'SSA (A^2)' 11970 ? 2 'ABSA (A^2)' 5660 ? 2 MORE -160 ? 2 'SSA (A^2)' 11960 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A DT 6 ? A DT 6 ? 1_555 ZN ? G ZN . ? A ZN 101 ? 1_555 NE2 ? C HIS 90 ? C HIS 289 ? 1_555 111.6 ? 2 SG ? C CYS 5 ? C CYS 204 ? 1_555 ZN ? J ZN . ? C ZN 401 ? 1_555 SG ? C CYS 8 ? C CYS 207 ? 1_555 101.9 ? 3 SG ? C CYS 5 ? C CYS 204 ? 1_555 ZN ? J ZN . ? C ZN 401 ? 1_555 SG ? C CYS 26 ? C CYS 225 ? 1_555 111.3 ? 4 SG ? C CYS 8 ? C CYS 207 ? 1_555 ZN ? J ZN . ? C ZN 401 ? 1_555 SG ? C CYS 26 ? C CYS 225 ? 1_555 117.0 ? 5 SG ? C CYS 5 ? C CYS 204 ? 1_555 ZN ? J ZN . ? C ZN 401 ? 1_555 SG ? C CYS 29 ? C CYS 228 ? 1_555 104.6 ? 6 SG ? C CYS 8 ? C CYS 207 ? 1_555 ZN ? J ZN . ? C ZN 401 ? 1_555 SG ? C CYS 29 ? C CYS 228 ? 1_555 120.3 ? 7 SG ? C CYS 26 ? C CYS 225 ? 1_555 ZN ? J ZN . ? C ZN 401 ? 1_555 SG ? C CYS 29 ? C CYS 228 ? 1_555 101.1 ? 8 OD2 ? C ASP 19 ? C ASP 218 ? 1_555 ZN ? L ZN . ? C ZN 403 ? 1_555 ND1 ? C HIS 23 ? C HIS 222 ? 1_555 106.7 ? 9 SG ? C CYS 59 ? C CYS 258 ? 1_555 ZN ? K ZN . ? C ZN 402 ? 1_555 SG ? C CYS 62 ? C CYS 261 ? 1_555 94.5 ? 10 SG ? C CYS 59 ? C CYS 258 ? 1_555 ZN ? K ZN . ? C ZN 402 ? 1_555 SG ? C CYS 80 ? C CYS 279 ? 1_555 145.0 ? 11 SG ? C CYS 62 ? C CYS 261 ? 1_555 ZN ? K ZN . ? C ZN 402 ? 1_555 SG ? C CYS 80 ? C CYS 279 ? 1_555 118.4 ? 12 SG ? C CYS 59 ? C CYS 258 ? 1_555 ZN ? K ZN . ? C ZN 402 ? 1_555 SG ? C CYS 83 ? C CYS 282 ? 1_555 98.5 ? 13 SG ? C CYS 62 ? C CYS 261 ? 1_555 ZN ? K ZN . ? C ZN 402 ? 1_555 SG ? C CYS 83 ? C CYS 282 ? 1_555 90.2 ? 14 SG ? C CYS 80 ? C CYS 279 ? 1_555 ZN ? K ZN . ? C ZN 402 ? 1_555 SG ? C CYS 83 ? C CYS 282 ? 1_555 93.3 ? 15 OP1 ? D DT 6 ? D DT 6 ? 1_555 ZN ? M ZN . ? D ZN 101 ? 1_555 OP2 ? D DT 6 ? D DT 6 ? 1_555 61.0 ? 16 OP1 ? D DT 6 ? D DT 6 ? 1_555 ZN ? M ZN . ? D ZN 101 ? 1_555 NE2 ? F HIS 90 ? F HIS 289 ? 1_555 115.0 ? 17 OP2 ? D DT 6 ? D DT 6 ? 1_555 ZN ? M ZN . ? D ZN 101 ? 1_555 NE2 ? F HIS 90 ? F HIS 289 ? 1_555 85.4 ? 18 SG ? F CYS 5 ? F CYS 204 ? 1_555 ZN ? P ZN . ? F ZN 401 ? 1_555 SG ? F CYS 8 ? F CYS 207 ? 1_555 104.6 ? 19 SG ? F CYS 5 ? F CYS 204 ? 1_555 ZN ? P ZN . ? F ZN 401 ? 1_555 SG ? F CYS 26 ? F CYS 225 ? 1_555 111.3 ? 20 SG ? F CYS 8 ? F CYS 207 ? 1_555 ZN ? P ZN . ? F ZN 401 ? 1_555 SG ? F CYS 26 ? F CYS 225 ? 1_555 113.0 ? 21 SG ? F CYS 5 ? F CYS 204 ? 1_555 ZN ? P ZN . ? F ZN 401 ? 1_555 SG ? F CYS 29 ? F CYS 228 ? 1_555 112.1 ? 22 SG ? F CYS 8 ? F CYS 207 ? 1_555 ZN ? P ZN . ? F ZN 401 ? 1_555 SG ? F CYS 29 ? F CYS 228 ? 1_555 117.3 ? 23 SG ? F CYS 26 ? F CYS 225 ? 1_555 ZN ? P ZN . ? F ZN 401 ? 1_555 SG ? F CYS 29 ? F CYS 228 ? 1_555 98.7 ? 24 OD2 ? F ASP 19 ? F ASP 218 ? 1_555 ZN ? T ZN . ? F ZN 405 ? 1_555 ND1 ? F HIS 23 ? F HIS 222 ? 1_555 106.1 ? 25 SG ? F CYS 59 ? F CYS 258 ? 1_555 ZN ? Q ZN . ? F ZN 402 ? 1_555 SG ? F CYS 62 ? F CYS 261 ? 1_555 105.3 ? 26 SG ? F CYS 59 ? F CYS 258 ? 1_555 ZN ? Q ZN . ? F ZN 402 ? 1_555 SG ? F CYS 80 ? F CYS 279 ? 1_555 135.7 ? 27 SG ? F CYS 62 ? F CYS 261 ? 1_555 ZN ? Q ZN . ? F ZN 402 ? 1_555 SG ? F CYS 80 ? F CYS 279 ? 1_555 113.9 ? 28 SG ? F CYS 59 ? F CYS 258 ? 1_555 ZN ? Q ZN . ? F ZN 402 ? 1_555 SG ? F CYS 83 ? F CYS 282 ? 1_555 102.4 ? 29 SG ? F CYS 62 ? F CYS 261 ? 1_555 ZN ? Q ZN . ? F ZN 402 ? 1_555 SG ? F CYS 83 ? F CYS 282 ? 1_555 94.9 ? 30 SG ? F CYS 80 ? F CYS 279 ? 1_555 ZN ? Q ZN . ? F ZN 402 ? 1_555 SG ? F CYS 83 ? F CYS 282 ? 1_555 94.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-16 2 'Structure model' 1 1 2023-05-24 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Refinement description' 4 2 'Structure model' 'Source and taxonomy' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_entity_src_syn 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ncs_dom_lim 8 2 'Structure model' struct_site 9 3 'Structure model' chem_comp_atom 10 3 'Structure model' chem_comp_bond 11 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_database_2.pdbx_DOI' 14 2 'Structure model' '_database_2.pdbx_database_accession' 15 2 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 16 2 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 21 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 22 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 23 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 24 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 25 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 26 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 27 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 28 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 29 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 30 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 31 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 32 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 33 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 34 2 'Structure model' '_pdbx_struct_conn_angle.value' 35 2 'Structure model' '_struct_conn.pdbx_dist_value' 36 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 37 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 38 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 39 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 40 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 41 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 42 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 43 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 44 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 45 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 46 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 47 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 48 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 49 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 50 2 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 51 2 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 52 2 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 53 2 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 54 2 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 55 2 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 56 2 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 57 2 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 58 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 59 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 60 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -8.2088 -9.1999 19.8625 0.2476 0.2898 0.2918 -0.0874 -0.0592 -0.0405 2.3078 1.5769 10.2946 0.0520 2.1728 1.1959 0.2590 -0.2877 -0.1089 0.0877 0.2870 -0.2276 -0.1422 0.4533 -0.5459 'X-RAY DIFFRACTION' 2 ? refined -14.760 -7.800 16.572 0.1152 0.4016 0.1908 0.0316 -0.0216 0.0918 6.0438 7.0782 7.1215 1.7708 3.8113 -1.6073 0.2085 -0.3944 -0.4998 0.0087 0.0856 -0.1661 0.0793 0.1913 -0.2941 'X-RAY DIFFRACTION' 3 ? refined -8.1681 24.1483 38.4492 0.2350 0.2998 0.2558 0.0984 0.0322 -0.0349 2.6098 1.5499 11.2000 -0.0287 -1.9479 1.3932 0.2960 0.1971 0.0451 -0.1418 0.2827 -0.2001 0.0082 0.4031 -0.5787 'X-RAY DIFFRACTION' 4 ? refined -14.774 22.745 41.735 0.1111 0.3161 0.1562 -0.0439 -0.0255 0.1247 10.7139 5.7082 8.6864 -3.2362 -2.1838 -0.1111 0.2308 0.2899 0.4756 -0.1873 -0.0729 -0.1623 -0.1306 0.0823 -0.1579 'X-RAY DIFFRACTION' 5 ? refined -17.208 -5.787 19.335 0.2309 0.0291 0.2818 -0.0131 0.0355 0.0318 4.6096 2.5323 10.6213 0.3920 1.4215 -2.6366 -0.2785 0.2680 0.5640 -0.1556 0.1668 -0.0154 -0.9207 -0.2324 0.1117 'X-RAY DIFFRACTION' 6 ? refined -17.189 20.691 39.062 0.2086 0.1455 0.2487 0.0091 -0.0460 0.0621 3.2972 3.3813 9.7520 -0.7420 -0.7432 -2.7923 -0.2508 -0.1020 -0.4487 0.2613 0.1509 0.0883 0.8548 -0.1265 0.0999 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 20 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 B 21 B 40 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 C 201 C 310 ? . . . . ? 'X-RAY DIFFRACTION' 4 3 D 1 D 20 ? . . . . ? 'X-RAY DIFFRACTION' 5 3 E 21 E 40 ? . . . . ? 'X-RAY DIFFRACTION' 6 4 F 201 F 310 ? . . . . ? 'X-RAY DIFFRACTION' 7 5 C 401 C 402 ? . . . . ? 'X-RAY DIFFRACTION' 8 6 F 401 F 402 ? . . . . ? # _pdbx_phasing_MR.entry_id 3VEK _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 40.250 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.630 _pdbx_phasing_MR.d_res_low_rotation 48.680 _pdbx_phasing_MR.d_res_high_translation 2.630 _pdbx_phasing_MR.d_res_low_translation 48.680 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MAR345dtb . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 8 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.39 108.30 2.09 0.30 N 2 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 111.05 108.30 2.75 0.30 N 3 1 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.12 108.30 1.82 0.30 N 4 1 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 111.79 108.30 3.49 0.30 N 5 1 "O4'" B DG 25 ? ? "C1'" B DG 25 ? ? N9 B DG 25 ? ? 110.71 108.30 2.41 0.30 N 6 1 "O4'" B DC 27 ? ? "C1'" B DC 27 ? ? N1 B DC 27 ? ? 110.78 108.30 2.48 0.30 N 7 1 "O4'" B DC 31 ? ? "C1'" B DC 31 ? ? N1 B DC 31 ? ? 110.86 108.30 2.56 0.30 N 8 1 "O4'" B DG 33 ? ? "C1'" B DG 33 ? ? N9 B DG 33 ? ? 111.24 108.30 2.94 0.30 N 9 1 "O4'" B DA 36 ? ? "C1'" B DA 36 ? ? N9 B DA 36 ? ? 111.70 108.30 3.40 0.30 N 10 1 "O4'" B DG 38 ? ? "C1'" B DG 38 ? ? N9 B DG 38 ? ? 111.77 108.30 3.47 0.30 N 11 1 "O4'" D DT 1 ? ? "C1'" D DT 1 ? ? N1 D DT 1 ? ? 110.70 108.30 2.40 0.30 N 12 1 "O4'" D DC 10 ? ? "C1'" D DC 10 ? ? N1 D DC 10 ? ? 111.16 108.30 2.86 0.30 N 13 1 "O4'" D DG 12 ? ? "C1'" D DG 12 ? ? N9 D DG 12 ? ? 110.36 108.30 2.06 0.30 N 14 1 "O4'" D DC 18 ? ? "C1'" D DC 18 ? ? N1 D DC 18 ? ? 112.21 108.30 3.91 0.30 N 15 1 "O4'" E DG 25 ? ? "C1'" E DG 25 ? ? N9 E DG 25 ? ? 110.33 108.30 2.03 0.30 N 16 1 "O4'" E DC 27 ? ? "C1'" E DC 27 ? ? N1 E DC 27 ? ? 110.44 108.30 2.14 0.30 N 17 1 "O4'" E DC 31 ? ? "C1'" E DC 31 ? ? N1 E DC 31 ? ? 110.35 108.30 2.05 0.30 N 18 1 "O4'" E DG 33 ? ? "C1'" E DG 33 ? ? N9 E DG 33 ? ? 110.69 108.30 2.39 0.30 N 19 1 "O4'" E DA 36 ? ? "C1'" E DA 36 ? ? N9 E DA 36 ? ? 111.55 108.30 3.25 0.30 N 20 1 "O4'" E DG 38 ? ? "C1'" E DG 38 ? ? N9 E DG 38 ? ? 111.95 108.30 3.65 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN C 206 ? ? -95.57 -60.25 2 1 THR C 212 ? ? -172.72 145.38 3 1 ASN C 260 ? ? -74.95 -75.12 4 1 ASN F 206 ? ? -96.28 -61.27 5 1 THR F 212 ? ? -171.97 147.42 6 1 LEU F 214 ? ? -160.70 113.52 7 1 ASN F 260 ? ? -77.67 -73.81 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C GLU 200 ? C GLU 1 2 1 Y 1 C ILE 242 ? C ILE 43 3 1 Y 1 C ARG 243 ? C ARG 44 4 1 Y 1 C PRO 244 ? C PRO 45 5 1 Y 1 C LYS 245 ? C LYS 46 6 1 Y 1 C LYS 246 ? C LYS 47 7 1 Y 1 C ARG 247 ? C ARG 48 8 1 Y 1 C MET 248 ? C MET 49 9 1 Y 1 C ILE 249 ? C ILE 50 10 1 Y 1 C VAL 250 ? C VAL 51 11 1 Y 1 C SER 251 ? C SER 52 12 1 Y 1 C LYS 252 ? C LYS 53 13 1 Y 1 C ARG 253 ? C ARG 54 14 1 Y 1 C ALA 254 ? C ALA 55 15 1 Y 1 C GLY 255 ? C GLY 56 16 1 Y 1 C GLY 311 ? C GLY 112 17 1 Y 1 C LYS 312 ? C LYS 113 18 1 Y 1 C GLY 313 ? C GLY 114 19 1 Y 1 C LYS 314 ? C LYS 115 20 1 Y 1 C LYS 315 ? C LYS 116 21 1 Y 1 C LYS 316 ? C LYS 117 22 1 Y 1 C ARG 317 ? C ARG 118 23 1 Y 1 C GLY 318 ? C GLY 119 24 1 Y 1 F GLU 200 ? F GLU 1 25 1 Y 1 F ILE 242 ? F ILE 43 26 1 Y 1 F ARG 243 ? F ARG 44 27 1 Y 1 F PRO 244 ? F PRO 45 28 1 Y 1 F LYS 245 ? F LYS 46 29 1 Y 1 F LYS 246 ? F LYS 47 30 1 Y 1 F ARG 247 ? F ARG 48 31 1 Y 1 F MET 248 ? F MET 49 32 1 Y 1 F ILE 249 ? F ILE 50 33 1 Y 1 F VAL 250 ? F VAL 51 34 1 Y 1 F SER 251 ? F SER 52 35 1 Y 1 F LYS 252 ? F LYS 53 36 1 Y 1 F ARG 253 ? F ARG 54 37 1 Y 1 F ALA 254 ? F ALA 55 38 1 Y 1 F GLY 255 ? F GLY 56 39 1 Y 1 F GLY 311 ? F GLY 112 40 1 Y 1 F LYS 312 ? F LYS 113 41 1 Y 1 F GLY 313 ? F GLY 114 42 1 Y 1 F LYS 314 ? F LYS 115 43 1 Y 1 F LYS 315 ? F LYS 116 44 1 Y 1 F LYS 316 ? F LYS 117 45 1 Y 1 F ARG 317 ? F ARG 118 46 1 Y 1 F GLY 318 ? F GLY 119 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TRP N N N N 461 TRP CA C N S 462 TRP C C N N 463 TRP O O N N 464 TRP CB C N N 465 TRP CG C Y N 466 TRP CD1 C Y N 467 TRP CD2 C Y N 468 TRP NE1 N Y N 469 TRP CE2 C Y N 470 TRP CE3 C Y N 471 TRP CZ2 C Y N 472 TRP CZ3 C Y N 473 TRP CH2 C Y N 474 TRP OXT O N N 475 TRP H H N N 476 TRP H2 H N N 477 TRP HA H N N 478 TRP HB2 H N N 479 TRP HB3 H N N 480 TRP HD1 H N N 481 TRP HE1 H N N 482 TRP HE3 H N N 483 TRP HZ2 H N N 484 TRP HZ3 H N N 485 TRP HH2 H N N 486 TRP HXT H N N 487 TYR N N N N 488 TYR CA C N S 489 TYR C C N N 490 TYR O O N N 491 TYR CB C N N 492 TYR CG C Y N 493 TYR CD1 C Y N 494 TYR CD2 C Y N 495 TYR CE1 C Y N 496 TYR CE2 C Y N 497 TYR CZ C Y N 498 TYR OH O N N 499 TYR OXT O N N 500 TYR H H N N 501 TYR H2 H N N 502 TYR HA H N N 503 TYR HB2 H N N 504 TYR HB3 H N N 505 TYR HD1 H N N 506 TYR HD2 H N N 507 TYR HE1 H N N 508 TYR HE2 H N N 509 TYR HH H N N 510 TYR HXT H N N 511 VAL N N N N 512 VAL CA C N S 513 VAL C C N N 514 VAL O O N N 515 VAL CB C N N 516 VAL CG1 C N N 517 VAL CG2 C N N 518 VAL OXT O N N 519 VAL H H N N 520 VAL H2 H N N 521 VAL HA H N N 522 VAL HB H N N 523 VAL HG11 H N N 524 VAL HG12 H N N 525 VAL HG13 H N N 526 VAL HG21 H N N 527 VAL HG22 H N N 528 VAL HG23 H N N 529 VAL HXT H N N 530 ZN ZN ZN N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TRP N CA sing N N 453 TRP N H sing N N 454 TRP N H2 sing N N 455 TRP CA C sing N N 456 TRP CA CB sing N N 457 TRP CA HA sing N N 458 TRP C O doub N N 459 TRP C OXT sing N N 460 TRP CB CG sing N N 461 TRP CB HB2 sing N N 462 TRP CB HB3 sing N N 463 TRP CG CD1 doub Y N 464 TRP CG CD2 sing Y N 465 TRP CD1 NE1 sing Y N 466 TRP CD1 HD1 sing N N 467 TRP CD2 CE2 doub Y N 468 TRP CD2 CE3 sing Y N 469 TRP NE1 CE2 sing Y N 470 TRP NE1 HE1 sing N N 471 TRP CE2 CZ2 sing Y N 472 TRP CE3 CZ3 doub Y N 473 TRP CE3 HE3 sing N N 474 TRP CZ2 CH2 doub Y N 475 TRP CZ2 HZ2 sing N N 476 TRP CZ3 CH2 sing Y N 477 TRP CZ3 HZ3 sing N N 478 TRP CH2 HH2 sing N N 479 TRP OXT HXT sing N N 480 TYR N CA sing N N 481 TYR N H sing N N 482 TYR N H2 sing N N 483 TYR CA C sing N N 484 TYR CA CB sing N N 485 TYR CA HA sing N N 486 TYR C O doub N N 487 TYR C OXT sing N N 488 TYR CB CG sing N N 489 TYR CB HB2 sing N N 490 TYR CB HB3 sing N N 491 TYR CG CD1 doub Y N 492 TYR CG CD2 sing Y N 493 TYR CD1 CE1 sing Y N 494 TYR CD1 HD1 sing N N 495 TYR CD2 CE2 doub Y N 496 TYR CD2 HD2 sing N N 497 TYR CE1 CZ doub Y N 498 TYR CE1 HE1 sing N N 499 TYR CE2 CZ sing Y N 500 TYR CE2 HE2 sing N N 501 TYR CZ OH sing N N 502 TYR OH HH sing N N 503 TYR OXT HXT sing N N 504 VAL N CA sing N N 505 VAL N H sing N N 506 VAL N H2 sing N N 507 VAL CA C sing N N 508 VAL CA CB sing N N 509 VAL CA HA sing N N 510 VAL C O doub N N 511 VAL C OXT sing N N 512 VAL CB CG1 sing N N 513 VAL CB CG2 sing N N 514 VAL CB HB sing N N 515 VAL CG1 HG11 sing N N 516 VAL CG1 HG12 sing N N 517 VAL CG1 HG13 sing N N 518 VAL CG2 HG21 sing N N 519 VAL CG2 HG22 sing N N 520 VAL CG2 HG23 sing N N 521 VAL OXT HXT sing N N 522 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3VEK 'double helix' 3VEK 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 3 1_555 B DC 20 1_555 -1.864 -0.073 -0.249 -6.089 -16.311 3.691 1 A_DG3:DC40_B A 3 ? B 40 ? ? 1 1 A DT 4 1_555 B DA 19 1_555 -0.310 0.169 0.182 -6.136 -16.545 -7.855 2 A_DT4:DA39_B A 4 ? B 39 ? 20 1 1 A DC 5 1_555 B DG 18 1_555 -0.061 -0.074 0.138 -8.142 -7.597 3.842 3 A_DC5:DG38_B A 5 ? B 38 ? 19 1 1 A DT 6 1_555 B DA 17 1_555 0.078 -0.179 0.431 -9.526 -15.858 4.328 4 A_DT6:DA37_B A 6 ? B 37 ? 20 1 1 A DT 7 1_555 B DA 16 1_555 0.021 -0.164 -0.431 3.651 -2.037 7.150 5 A_DT7:DA36_B A 7 ? B 36 ? 20 1 1 A DA 8 1_555 B DT 15 1_555 -0.285 -0.209 0.173 2.703 -17.917 -0.073 6 A_DA8:DT35_B A 8 ? B 35 ? 20 1 1 A DT 9 1_555 B DA 14 1_555 -0.013 0.036 0.388 7.366 -9.493 7.928 7 A_DT9:DA34_B A 9 ? B 34 ? 20 1 1 A DC 10 1_555 B DG 13 1_555 -0.086 -0.197 0.380 -0.092 -28.496 -1.150 8 A_DC10:DG33_B A 10 ? B 33 ? 19 1 1 A DA 11 1_555 B DT 12 1_555 -0.004 -0.151 0.600 1.399 -4.310 3.312 9 A_DA11:DT32_B A 11 ? B 32 ? 20 1 1 A DG 12 1_555 B DC 11 1_555 -0.355 -0.264 0.404 5.536 -20.962 1.011 10 A_DG12:DC31_B A 12 ? B 31 ? 19 1 1 A DA 13 1_555 B DT 10 1_555 -0.248 -0.027 -0.015 -12.060 -12.904 5.678 11 A_DA13:DT30_B A 13 ? B 30 ? 20 1 1 A DT 14 1_555 B DA 9 1_555 0.667 -0.025 0.452 -10.038 -15.094 0.340 12 A_DT14:DA29_B A 14 ? B 29 ? 20 1 1 A DG 15 1_555 B DC 8 1_555 -0.356 -0.175 -0.066 -5.169 -2.487 0.954 13 A_DG15:DC28_B A 15 ? B 28 ? 19 1 1 A DG 16 1_555 B DC 7 1_555 0.016 -0.070 0.241 10.422 -17.753 0.651 14 A_DG16:DC27_B A 16 ? B 27 ? 19 1 1 A DA 17 1_555 B DT 6 1_555 0.262 0.186 0.105 10.086 -21.660 6.699 15 A_DA17:DT26_B A 17 ? B 26 ? ? ? 1 A DC 18 1_555 B DG 5 1_555 0.875 -0.050 0.364 -6.534 -18.828 2.276 16 A_DC18:DG25_B A 18 ? B 25 ? 19 1 1 A DT 19 1_555 B DA 4 1_555 0.274 0.031 0.053 -7.083 -18.495 1.501 17 A_DT19:DA24_B A 19 ? B 24 ? 20 1 1 A DC 20 1_555 B DG 3 1_555 -0.606 0.526 0.454 -2.772 -16.435 13.543 18 A_DC20:DG23_B A 20 ? B 23 ? ? 1 1 D DG 3 1_555 E DC 20 1_555 -1.661 0.038 -0.424 -7.408 -14.004 5.646 19 D_DG3:DC40_E D 3 ? E 40 ? ? 1 1 D DT 4 1_555 E DA 19 1_555 -0.550 0.105 0.142 -6.603 -18.424 -6.606 20 D_DT4:DA39_E D 4 ? E 39 ? 20 1 1 D DC 5 1_555 E DG 18 1_555 -0.186 -0.162 0.414 -9.176 -7.262 -0.129 21 D_DC5:DG38_E D 5 ? E 38 ? 19 1 1 D DT 6 1_555 E DA 17 1_555 0.029 -0.238 0.865 -15.826 -12.667 2.831 22 D_DT6:DA37_E D 6 ? E 37 ? 20 1 1 D DT 7 1_555 E DA 16 1_555 -0.027 -0.147 -0.207 -1.737 1.962 8.180 23 D_DT7:DA36_E D 7 ? E 36 ? 20 1 1 D DA 8 1_555 E DT 15 1_555 -0.135 -0.135 0.255 4.352 -17.560 0.986 24 D_DA8:DT35_E D 8 ? E 35 ? 20 1 1 D DT 9 1_555 E DA 14 1_555 0.080 -0.030 0.307 9.109 -7.855 6.549 25 D_DT9:DA34_E D 9 ? E 34 ? 20 1 1 D DC 10 1_555 E DG 13 1_555 -0.059 -0.257 0.162 -3.125 -23.912 -3.155 26 D_DC10:DG33_E D 10 ? E 33 ? 19 1 1 D DA 11 1_555 E DT 12 1_555 0.015 -0.146 0.389 -4.635 -2.787 2.247 27 D_DA11:DT32_E D 11 ? E 32 ? 20 1 1 D DG 12 1_555 E DC 11 1_555 -0.273 -0.212 0.269 2.166 -21.480 1.584 28 D_DG12:DC31_E D 12 ? E 31 ? 19 1 1 D DA 13 1_555 E DT 10 1_555 -0.162 -0.005 -0.022 -12.503 -11.337 6.229 29 D_DA13:DT30_E D 13 ? E 30 ? 20 1 1 D DT 14 1_555 E DA 9 1_555 0.279 0.004 0.503 -12.420 -14.915 1.590 30 D_DT14:DA29_E D 14 ? E 29 ? 20 1 1 D DG 15 1_555 E DC 8 1_555 -0.256 -0.162 -0.388 -11.822 -7.125 0.674 31 D_DG15:DC28_E D 15 ? E 28 ? 19 1 1 D DG 16 1_555 E DC 7 1_555 0.091 -0.101 0.446 10.648 -13.332 1.432 32 D_DG16:DC27_E D 16 ? E 27 ? 19 1 1 D DA 17 1_555 E DT 6 1_555 0.213 0.087 0.115 9.588 -20.952 6.391 33 D_DA17:DT26_E D 17 ? E 26 ? 20 1 1 D DC 18 1_555 E DG 5 1_555 0.703 -0.126 0.472 -6.782 -21.418 1.228 34 D_DC18:DG25_E D 18 ? E 25 ? 19 1 1 D DT 19 1_555 E DA 4 1_555 0.503 -0.012 -0.079 -4.064 -14.364 3.993 35 D_DT19:DA24_E D 19 ? E 24 ? 20 1 1 D DC 20 1_555 E DG 3 1_555 -0.223 0.332 0.312 -2.164 -15.353 12.083 36 D_DC20:DG23_E D 20 ? E 23 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 3 1_555 B DC 20 1_555 A DT 4 1_555 B DA 19 1_555 -0.546 -0.182 3.270 -4.775 1.241 44.115 -0.357 0.277 3.303 1.647 6.334 44.376 1 AA_DG3DT4:DA39DC40_BB A 3 ? B 40 ? A 4 ? B 39 ? 1 A DT 4 1_555 B DA 19 1_555 A DC 5 1_555 B DG 18 1_555 1.137 0.293 3.400 1.921 -0.402 38.379 0.497 -1.477 3.448 -0.611 -2.920 38.427 2 AA_DT4DC5:DG38DA39_BB A 4 ? B 39 ? A 5 ? B 38 ? 1 A DC 5 1_555 B DG 18 1_555 A DT 6 1_555 B DA 17 1_555 -0.466 0.363 3.519 -1.028 3.897 31.148 -0.122 0.652 3.550 7.219 1.905 31.402 3 AA_DC5DT6:DA37DG38_BB A 5 ? B 38 ? A 6 ? B 37 ? 1 A DT 6 1_555 B DA 17 1_555 A DT 7 1_555 B DA 16 1_555 1.520 0.724 3.017 8.190 1.561 36.166 0.934 -1.317 3.299 2.474 -12.981 37.084 4 AA_DT6DT7:DA36DA37_BB A 6 ? B 37 ? A 7 ? B 36 ? 1 A DT 7 1_555 B DA 16 1_555 A DA 8 1_555 B DT 15 1_555 -1.827 0.719 3.417 -8.710 -2.267 37.965 1.380 1.578 3.684 -3.426 13.163 38.979 5 AA_DT7DA8:DT35DA36_BB A 7 ? B 36 ? A 8 ? B 35 ? 1 A DA 8 1_555 B DT 15 1_555 A DT 9 1_555 B DA 14 1_555 0.757 -0.543 3.161 -1.483 -3.598 30.714 -0.344 -1.697 3.164 -6.758 2.786 30.954 6 AA_DA8DT9:DA34DT35_BB A 8 ? B 35 ? A 9 ? B 34 ? 1 A DT 9 1_555 B DA 14 1_555 A DC 10 1_555 B DG 13 1_555 0.047 -0.110 3.372 0.973 -8.131 40.328 0.756 0.043 3.332 -11.649 -1.394 41.117 7 AA_DT9DC10:DG33DA34_BB A 9 ? B 34 ? A 10 ? B 33 ? 1 A DC 10 1_555 B DG 13 1_555 A DA 11 1_555 B DT 12 1_555 0.329 -0.896 3.121 1.323 5.803 35.217 -2.246 -0.358 2.951 9.507 -2.168 35.701 8 AA_DC10DA11:DT32DG33_BB A 10 ? B 33 ? A 11 ? B 32 ? 1 A DA 11 1_555 B DT 12 1_555 A DG 12 1_555 B DC 11 1_555 -0.124 -0.675 3.220 -0.724 2.806 35.553 -1.500 0.100 3.161 4.586 1.183 35.667 9 AA_DA11DG12:DC31DT32_BB A 11 ? B 32 ? A 12 ? B 31 ? 1 A DG 12 1_555 B DC 11 1_555 A DA 13 1_555 B DT 10 1_555 -0.243 -0.422 3.499 2.184 0.088 41.698 -0.602 0.586 3.482 0.124 -3.065 41.753 10 AA_DG12DA13:DT30DC31_BB A 12 ? B 31 ? A 13 ? B 30 ? 1 A DA 13 1_555 B DT 10 1_555 A DT 14 1_555 B DA 9 1_555 -0.639 -0.414 3.339 -4.901 -3.938 34.622 -0.074 0.297 3.419 -6.550 8.152 35.171 11 AA_DA13DT14:DA29DT30_BB A 13 ? B 30 ? A 14 ? B 29 ? 1 A DT 14 1_555 B DA 9 1_555 A DG 15 1_555 B DC 8 1_555 0.908 0.742 3.199 5.116 0.551 33.006 1.201 -0.732 3.310 0.962 -8.938 33.393 12 AA_DT14DG15:DC28DA29_BB A 14 ? B 29 ? A 15 ? B 28 ? 1 A DG 15 1_555 B DC 8 1_555 A DG 16 1_555 B DC 7 1_555 -0.890 0.589 3.042 -6.187 4.970 33.592 0.246 0.572 3.203 8.454 10.523 34.491 13 AA_DG15DG16:DC27DC28_BB A 15 ? B 28 ? A 16 ? B 27 ? 1 A DG 16 1_555 B DC 7 1_555 A DA 17 1_555 B DT 6 1_555 -0.213 -0.045 3.266 0.337 0.750 37.713 -0.167 0.373 3.262 1.160 -0.522 37.722 14 AA_DG16DA17:DT26DC27_BB A 16 ? B 27 ? A 17 ? B 26 ? 1 A DA 17 1_555 B DT 6 1_555 A DC 18 1_555 B DG 5 1_555 0.109 -0.988 3.705 -4.354 0.699 34.460 -1.775 -0.934 3.644 1.174 7.313 34.732 15 AA_DA17DC18:DG25DT26_BB A 17 ? B 26 ? A 18 ? B 25 ? 1 A DC 18 1_555 B DG 5 1_555 A DT 19 1_555 B DA 4 1_555 -0.293 -0.494 3.232 5.625 3.986 35.090 -1.365 1.268 3.077 6.534 -9.219 35.740 16 AA_DC18DT19:DA24DG25_BB A 18 ? B 25 ? A 19 ? B 24 ? 1 A DT 19 1_555 B DA 4 1_555 A DC 20 1_555 B DG 3 1_555 0.545 -0.003 3.089 -1.404 3.969 30.633 -0.728 -1.279 3.037 7.467 2.642 30.914 17 AA_DT19DC20:DG23DA24_BB A 19 ? B 24 ? A 20 ? B 23 ? 1 D DG 3 1_555 E DC 20 1_555 D DT 4 1_555 E DA 19 1_555 -0.570 -0.175 3.224 -4.498 0.342 42.026 -0.277 0.332 3.263 0.475 6.250 42.256 18 DD_DG3DT4:DA39DC40_EE D 3 ? E 40 ? D 4 ? E 39 ? 1 D DT 4 1_555 E DA 19 1_555 D DC 5 1_555 E DG 18 1_555 1.021 0.326 3.415 -0.092 -0.856 39.519 0.587 -1.520 3.405 -1.266 0.136 39.528 19 DD_DT4DC5:DG38DA39_EE D 4 ? E 39 ? D 5 ? E 38 ? 1 D DC 5 1_555 E DG 18 1_555 D DT 6 1_555 E DA 17 1_555 -0.389 0.095 3.651 -2.501 4.102 31.143 -0.685 0.193 3.652 7.584 4.624 31.502 20 DD_DC5DT6:DA37DG38_EE D 5 ? E 38 ? D 6 ? E 37 ? 1 D DT 6 1_555 E DA 17 1_555 D DT 7 1_555 E DA 16 1_555 1.622 0.563 3.069 8.805 -1.003 37.256 0.984 -1.377 3.337 -1.543 -13.548 38.259 21 DD_DT6DT7:DA36DA37_EE D 6 ? E 37 ? D 7 ? E 36 ? 1 D DT 7 1_555 E DA 16 1_555 D DA 8 1_555 E DT 15 1_555 -1.817 0.786 3.222 -6.128 -5.071 38.037 1.809 1.976 3.336 -7.678 9.278 38.830 22 DD_DT7DA8:DT35DA36_EE D 7 ? E 36 ? D 8 ? E 35 ? 1 D DA 8 1_555 E DT 15 1_555 D DT 9 1_555 E DA 14 1_555 0.691 -0.578 3.176 -1.081 -3.158 30.453 -0.486 -1.516 3.193 -5.990 2.049 30.631 23 DD_DA8DT9:DA34DT35_EE D 8 ? E 35 ? D 9 ? E 34 ? 1 D DT 9 1_555 E DA 14 1_555 D DC 10 1_555 E DG 13 1_555 -0.032 -0.197 3.413 1.430 -5.932 40.218 0.407 0.213 3.404 -8.567 -2.065 40.660 24 DD_DT9DC10:DG33DA34_EE D 9 ? E 34 ? D 10 ? E 33 ? 1 D DC 10 1_555 E DG 13 1_555 D DA 11 1_555 E DT 12 1_555 0.314 -1.032 3.188 1.038 6.799 35.206 -2.600 -0.370 2.952 11.110 -1.697 35.850 25 DD_DC10DA11:DT32DG33_EE D 10 ? E 33 ? D 11 ? E 32 ? 1 D DA 11 1_555 E DT 12 1_555 D DG 12 1_555 E DC 11 1_555 -0.128 -0.513 3.267 -0.957 0.635 36.061 -0.918 0.071 3.260 1.025 1.545 36.078 26 DD_DA11DG12:DC31DT32_EE D 11 ? E 32 ? D 12 ? E 31 ? 1 D DG 12 1_555 E DC 11 1_555 D DA 13 1_555 E DT 10 1_555 -0.198 -0.445 3.455 1.385 -1.084 40.546 -0.514 0.449 3.457 -1.564 -1.998 40.583 27 DD_DG12DA13:DT30DC31_EE D 12 ? E 31 ? D 13 ? E 30 ? 1 D DA 13 1_555 E DT 10 1_555 D DT 14 1_555 E DA 9 1_555 -0.514 -0.457 3.377 -4.295 -3.074 33.313 -0.264 0.154 3.442 -5.321 7.434 33.717 28 DD_DA13DT14:DA29DT30_EE D 13 ? E 30 ? D 14 ? E 29 ? 1 D DT 14 1_555 E DA 9 1_555 D DG 15 1_555 E DC 8 1_555 0.678 0.824 3.281 8.016 4.013 35.531 0.738 0.068 3.418 6.449 -12.884 36.609 29 DD_DT14DG15:DC28DA29_EE D 14 ? E 29 ? D 15 ? E 28 ? 1 D DG 15 1_555 E DC 8 1_555 D DG 16 1_555 E DC 7 1_555 -0.909 0.650 2.777 -11.522 3.025 33.314 0.667 -0.044 2.966 5.078 19.344 35.323 30 DD_DG15DG16:DC27DC28_EE D 15 ? E 28 ? D 16 ? E 27 ? 1 D DG 16 1_555 E DC 7 1_555 D DA 17 1_555 E DT 6 1_555 -0.258 -0.212 3.360 2.025 -0.103 36.301 -0.325 0.702 3.342 -0.166 -3.247 36.356 31 DD_DG16DA17:DT26DC27_EE D 16 ? E 27 ? D 17 ? E 26 ? 1 D DA 17 1_555 E DT 6 1_555 D DC 18 1_555 E DG 5 1_555 0.192 -0.950 3.682 -4.389 -1.445 34.029 -1.354 -1.101 3.666 -2.455 7.457 34.332 32 DD_DA17DC18:DG25DT26_EE D 17 ? E 26 ? D 18 ? E 25 ? 1 D DC 18 1_555 E DG 5 1_555 D DT 19 1_555 E DA 4 1_555 -0.109 -0.465 3.111 7.055 4.716 37.031 -1.282 1.015 2.963 7.308 -10.932 37.958 33 DD_DC18DT19:DA24DG25_EE D 18 ? E 25 ? D 19 ? E 24 ? 1 D DT 19 1_555 E DA 4 1_555 D DC 20 1_555 E DG 3 1_555 0.454 -0.043 3.199 -1.037 3.273 31.649 -0.661 -1.013 3.163 5.979 1.894 31.830 34 DD_DT19DC20:DG23DA24_EE D 19 ? E 24 ? D 20 ? E 23 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3VD6 _pdbx_initial_refinement_model.details 'PDB ENTRY 3VD6' #