data_3VJF # _entry.id 3VJF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3VJF RCSB RCSB095119 WWPDB D_1000095119 # _pdbx_database_status.entry_id 3VJF _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2011-10-18 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Arai, R.' 1 'Kimura, A.' 2 'Kobayashi, N.' 3 'Matsuo, K.' 4 'Sato, T.' 5 'Wang, A.F.' 6 'Platt, J.M.' 7 'Bradley, L.H.' 8 'Hecht, M.H.' 9 # _citation.id primary _citation.title 'Domain-swapped dimeric structure of a stable and functional de novo four-helix bundle protein, WA20' _citation.journal_abbrev J.Phys.Chem.B _citation.journal_volume 116 _citation.page_first 6789 _citation.page_last 6797 _citation.year 2012 _citation.journal_id_ASTM JPCBFK _citation.country US _citation.journal_id_ISSN 1089-5647 _citation.journal_id_CSD 1278 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22397676 _citation.pdbx_database_id_DOI 10.1021/jp212438h # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Arai, R.' 1 primary 'Kobayashi, N.' 2 primary 'Kimura, A.' 3 primary 'Sato, T.' 4 primary 'Matsuo, K.' 5 primary 'Wang, A.F.' 6 primary 'Platt, J.M.' 7 primary 'Bradley, L.H.' 8 primary 'Hecht, M.H.' 9 # _cell.length_a 65.950 _cell.length_b 102.858 _cell.length_c 31.344 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3VJF _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 3VJF _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man WA20 12943.274 2 ? ? ? 'a de novo protein from artificially designed superfamily of 4-helix bundle' 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 water nat water 18.015 55 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)YGKLNKLVEHIKELLQQLNKNWHRHQGNLHD(MSE)NQQ(MSE)EQLFQEFQHF(MSE)QGNQDDGKLQN(MSE) IHE(MSE)QQF(MSE)NQVDNHLQSESDTVHHFHNKLQEL(MSE)NNFHHLVHR ; _entity_poly.pdbx_seq_one_letter_code_can ;MYGKLNKLVEHIKELLQQLNKNWHRHQGNLHDMNQQMEQLFQEFQHFMQGNQDDGKLQNMIHEMQQFMNQVDNHLQSESD TVHHFHNKLQELMNNFHHLVHR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 TYR n 1 3 GLY n 1 4 LYS n 1 5 LEU n 1 6 ASN n 1 7 LYS n 1 8 LEU n 1 9 VAL n 1 10 GLU n 1 11 HIS n 1 12 ILE n 1 13 LYS n 1 14 GLU n 1 15 LEU n 1 16 LEU n 1 17 GLN n 1 18 GLN n 1 19 LEU n 1 20 ASN n 1 21 LYS n 1 22 ASN n 1 23 TRP n 1 24 HIS n 1 25 ARG n 1 26 HIS n 1 27 GLN n 1 28 GLY n 1 29 ASN n 1 30 LEU n 1 31 HIS n 1 32 ASP n 1 33 MSE n 1 34 ASN n 1 35 GLN n 1 36 GLN n 1 37 MSE n 1 38 GLU n 1 39 GLN n 1 40 LEU n 1 41 PHE n 1 42 GLN n 1 43 GLU n 1 44 PHE n 1 45 GLN n 1 46 HIS n 1 47 PHE n 1 48 MSE n 1 49 GLN n 1 50 GLY n 1 51 ASN n 1 52 GLN n 1 53 ASP n 1 54 ASP n 1 55 GLY n 1 56 LYS n 1 57 LEU n 1 58 GLN n 1 59 ASN n 1 60 MSE n 1 61 ILE n 1 62 HIS n 1 63 GLU n 1 64 MSE n 1 65 GLN n 1 66 GLN n 1 67 PHE n 1 68 MSE n 1 69 ASN n 1 70 GLN n 1 71 VAL n 1 72 ASP n 1 73 ASN n 1 74 HIS n 1 75 LEU n 1 76 GLN n 1 77 SER n 1 78 GLU n 1 79 SER n 1 80 ASP n 1 81 THR n 1 82 VAL n 1 83 HIS n 1 84 HIS n 1 85 PHE n 1 86 HIS n 1 87 ASN n 1 88 LYS n 1 89 LEU n 1 90 GLN n 1 91 GLU n 1 92 LEU n 1 93 MSE n 1 94 ASN n 1 95 ASN n 1 96 PHE n 1 97 HIS n 1 98 HIS n 1 99 LEU n 1 100 VAL n 1 101 HIS n 1 102 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-3a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3VJF _struct_ref.pdbx_db_accession 3VJF _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VJF A 1 ? 102 ? 3VJF 1 ? 102 ? 1 102 2 1 3VJF B 1 ? 102 ? 3VJF 1 ? 102 ? 1 102 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3VJF _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 1.338 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 40.10 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.2 _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.pdbx_details ;1.344M potassium phosphate dibasic, 0.056M sodium phosphate monobasic monohydrate, pH 8.2, VAPOR DIFFUSION, SITTING DROP, temperature 277.15K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-06-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'Si(111) double crystal monochromator' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97881 1.0 2 0.97908 1.0 3 0.90000 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.pdbx_wavelength_list '0.97881, 0.97908, 0.90000' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-5A # _reflns.entry_id 3VJF _reflns.d_resolution_high 2.20 _reflns.d_resolution_low 50.00 _reflns.number_obs 11102 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_netI_over_sigmaI 11.6 _reflns.pdbx_chi_squared 1.001 _reflns.pdbx_redundancy 6.1 _reflns.percent_possible_obs 97.4 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 43.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.20 2.28 ? ? ? ? 0.306 5.4 ? 1.037 5.5 ? ? ? 945 ? ? ? ? 85.3 ? ? 1 1 2.28 2.37 ? ? ? ? 0.247 6.5 ? 1.039 5.6 ? ? ? 1009 ? ? ? ? 91.6 ? ? 2 1 2.37 2.48 ? ? ? ? 0.221 7.6 ? 1.013 6.0 ? ? ? 1072 ? ? ? ? 97.5 ? ? 3 1 2.48 2.61 ? ? ? ? 0.165 10.7 ? 1.008 6.2 ? ? ? 1152 ? ? ? ? 100.0 ? ? 4 1 2.61 2.77 ? ? ? ? 0.152 11.2 ? 0.987 6.5 ? ? ? 1100 ? ? ? ? 99.9 ? ? 5 1 2.77 2.99 ? ? ? ? 0.117 13.1 ? 0.988 6.5 ? ? ? 1123 ? ? ? ? 100.0 ? ? 6 1 2.99 3.29 ? ? ? ? 0.106 13.3 ? 1.009 6.5 ? ? ? 1136 ? ? ? ? 100.0 ? ? 7 1 3.29 3.76 ? ? ? ? 0.078 15.0 ? 0.953 6.4 ? ? ? 1151 ? ? ? ? 100.0 ? ? 8 1 3.76 4.74 ? ? ? ? 0.079 14.5 ? 0.970 6.2 ? ? ? 1171 ? ? ? ? 100.0 ? ? 9 1 4.74 50.00 ? ? ? ? 0.093 9.6 ? 1.030 5.8 ? ? ? 1243 ? ? ? ? 98.7 ? ? 10 1 # _refine.entry_id 3VJF _refine.ls_d_res_high 2.20 _refine.ls_d_res_low 50.00 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.8 _refine.ls_number_reflns_obs 11007 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.234 _refine.ls_R_factor_R_work 0.233 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.255 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_number_reflns_R_free 528 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 51.239 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.11 _refine.aniso_B[2][2] 3.60 _refine.aniso_B[3][3] -2.49 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.correlation_coeff_Fo_to_Fc 0.9270 _refine.correlation_coeff_Fo_to_Fc_free 0.9090 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.2320 _refine.overall_SU_ML 0.1760 _refine.overall_SU_B 15.0560 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 139.680 _refine.B_iso_min 2.000 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1635 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 1691 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1674 0.009 0.021 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2242 1.165 1.868 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 186 4.707 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 117 39.823 26.239 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 321 17.409 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 2 17.355 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 222 0.090 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1314 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 937 0.476 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1502 0.971 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 737 1.892 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 740 2.800 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.26 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 83.88 _refine_ls_shell.number_reflns_R_work 652 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.223 _refine_ls_shell.R_factor_R_free 0.282 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 687 _refine_ls_shell.number_reflns_obs 687 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3VJF _struct.title 'Crystal structure of de novo 4-helix bundle protein WA20' _struct.pdbx_descriptor WA20 _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VJF _struct_keywords.text 'PROTEIN DESIGN, DE NOVO PROTEIN, BINARY PATTERNED DESIGN, FOUR HELIX BUNDLE, 3D DOMAIN SWAPPING, Rudimentary enzymatic activities' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 3 ? ASN A 51 ? GLY A 3 ASN A 51 1 ? 49 HELX_P HELX_P2 2 ASP A 53 ? HIS A 101 ? ASP A 53 HIS A 101 1 ? 49 HELX_P HELX_P3 3 LYS B 7 ? MSE B 48 ? LYS B 7 MSE B 48 1 ? 42 HELX_P HELX_P4 4 LEU B 57 ? HIS B 101 ? LEU B 57 HIS B 101 1 ? 45 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASP 32 C ? ? ? 1_555 A MSE 33 N ? ? A ASP 32 A MSE 33 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 33 C ? ? ? 1_555 A ASN 34 N ? ? A MSE 33 A ASN 34 1_555 ? ? ? ? ? ? ? 1.333 ? covale3 covale ? ? A GLN 36 C ? ? ? 1_555 A MSE 37 N ? ? A GLN 36 A MSE 37 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale ? ? A MSE 37 C ? ? ? 1_555 A GLU 38 N ? ? A MSE 37 A GLU 38 1_555 ? ? ? ? ? ? ? 1.337 ? covale5 covale ? ? A PHE 47 C ? ? ? 1_555 A MSE 48 N ? ? A PHE 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? A MSE 48 C ? ? ? 1_555 A GLN 49 N ? ? A MSE 48 A GLN 49 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale ? ? A ASN 59 C ? ? ? 1_555 A MSE 60 N ? ? A ASN 59 A MSE 60 1_555 ? ? ? ? ? ? ? 1.330 ? covale8 covale ? ? A MSE 60 C ? ? ? 1_555 A ILE 61 N ? ? A MSE 60 A ILE 61 1_555 ? ? ? ? ? ? ? 1.334 ? covale9 covale ? ? A GLU 63 C ? ? ? 1_555 A MSE 64 N ? ? A GLU 63 A MSE 64 1_555 ? ? ? ? ? ? ? 1.342 ? covale10 covale ? ? A MSE 64 C ? ? ? 1_555 A GLN 65 N ? ? A MSE 64 A GLN 65 1_555 ? ? ? ? ? ? ? 1.328 ? covale11 covale ? ? A PHE 67 C ? ? ? 1_555 A MSE 68 N ? ? A PHE 67 A MSE 68 1_555 ? ? ? ? ? ? ? 1.330 ? covale12 covale ? ? A MSE 68 C ? ? ? 1_555 A ASN 69 N ? ? A MSE 68 A ASN 69 1_555 ? ? ? ? ? ? ? 1.333 ? covale13 covale ? ? A LEU 92 C ? ? ? 1_555 A MSE 93 N ? ? A LEU 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.329 ? covale14 covale ? ? A MSE 93 C ? ? ? 1_555 A ASN 94 N ? ? A MSE 93 A ASN 94 1_555 ? ? ? ? ? ? ? 1.326 ? covale15 covale ? ? B ASP 32 C ? ? ? 1_555 B MSE 33 N ? ? B ASP 32 B MSE 33 1_555 ? ? ? ? ? ? ? 1.331 ? covale16 covale ? ? B MSE 33 C ? ? ? 1_555 B ASN 34 N ? ? B MSE 33 B ASN 34 1_555 ? ? ? ? ? ? ? 1.332 ? covale17 covale ? ? B GLN 36 C ? ? ? 1_555 B MSE 37 N ? ? B GLN 36 B MSE 37 1_555 ? ? ? ? ? ? ? 1.328 ? covale18 covale ? ? B MSE 37 C ? ? ? 1_555 B GLU 38 N ? ? B MSE 37 B GLU 38 1_555 ? ? ? ? ? ? ? 1.333 ? covale19 covale ? ? B PHE 47 C ? ? ? 1_555 B MSE 48 N ? ? B PHE 47 B MSE 48 1_555 ? ? ? ? ? ? ? 1.335 ? covale20 covale ? ? B ASN 59 C ? ? ? 1_555 B MSE 60 N ? ? B ASN 59 B MSE 60 1_555 ? ? ? ? ? ? ? 1.330 ? covale21 covale ? ? B MSE 60 C ? ? ? 1_555 B ILE 61 N ? ? B MSE 60 B ILE 61 1_555 ? ? ? ? ? ? ? 1.329 ? covale22 covale ? ? B GLU 63 C ? ? ? 1_555 B MSE 64 N ? ? B GLU 63 B MSE 64 1_555 ? ? ? ? ? ? ? 1.327 ? covale23 covale ? ? B MSE 64 C ? ? ? 1_555 B GLN 65 N ? ? B MSE 64 B GLN 65 1_555 ? ? ? ? ? ? ? 1.332 ? covale24 covale ? ? B PHE 67 C ? ? ? 1_555 B MSE 68 N ? ? B PHE 67 B MSE 68 1_555 ? ? ? ? ? ? ? 1.329 ? covale25 covale ? ? B MSE 68 C ? ? ? 1_555 B ASN 69 N ? ? B MSE 68 B ASN 69 1_555 ? ? ? ? ? ? ? 1.338 ? covale26 covale ? ? B LEU 92 C ? ? ? 1_555 B MSE 93 N ? ? B LEU 92 B MSE 93 1_555 ? ? ? ? ? ? ? 1.334 ? covale27 covale ? ? B MSE 93 C ? ? ? 1_555 B ASN 94 N ? ? B MSE 93 B ASN 94 1_555 ? ? ? ? ? ? ? 1.330 ? metalc1 metalc ? ? A ASN 51 O ? ? ? 1_555 C K . K ? ? A ASN 51 A K 201 1_555 ? ? ? ? ? ? ? 2.548 ? metalc2 metalc ? ? A MSE 48 O ? ? ? 1_555 C K . K ? ? A MSE 48 A K 201 1_555 ? ? ? ? ? ? ? 2.747 ? metalc3 metalc ? ? A GLN 49 O ? ? ? 1_555 C K . K ? ? A GLN 49 A K 201 1_555 ? ? ? ? ? ? ? 2.973 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE K A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 MSE A 48 ? MSE A 48 . ? 1_555 ? 2 AC1 6 MSE A 48 ? MSE A 48 . ? 2_765 ? 3 AC1 6 GLN A 49 ? GLN A 49 . ? 2_765 ? 4 AC1 6 GLN A 49 ? GLN A 49 . ? 1_555 ? 5 AC1 6 ASN A 51 ? ASN A 51 . ? 2_765 ? 6 AC1 6 ASN A 51 ? ASN A 51 . ? 1_555 ? # _atom_sites.entry_id 3VJF _atom_sites.fract_transf_matrix[1][1] 0.015163 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009722 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031904 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C K N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 TYR 2 2 ? ? ? A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 TRP 23 23 23 TRP TRP A . n A 1 24 HIS 24 24 24 HIS HIS A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 HIS 26 26 26 HIS HIS A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 MSE 33 33 33 MSE MSE A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 MSE 37 37 37 MSE MSE A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 MSE 48 48 48 MSE MSE A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 MSE 60 60 60 MSE MSE A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 HIS 62 62 62 HIS HIS A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 MSE 64 64 64 MSE MSE A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 MSE 68 68 68 MSE MSE A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 HIS 74 74 74 HIS HIS A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 HIS 84 84 84 HIS HIS A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 MSE 93 93 93 MSE MSE A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 HIS 98 98 98 HIS HIS A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 ARG 102 102 ? ? ? A . n B 1 1 MSE 1 1 ? ? ? B . n B 1 2 TYR 2 2 ? ? ? B . n B 1 3 GLY 3 3 ? ? ? B . n B 1 4 LYS 4 4 ? ? ? B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 ASN 6 6 6 ASN ASN B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 GLU 10 10 10 GLU GLU B . n B 1 11 HIS 11 11 11 HIS HIS B . n B 1 12 ILE 12 12 12 ILE ILE B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 GLN 17 17 17 GLN GLN B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 ASN 20 20 20 ASN ASN B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 TRP 23 23 23 TRP TRP B . n B 1 24 HIS 24 24 24 HIS HIS B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 HIS 26 26 26 HIS HIS B . n B 1 27 GLN 27 27 27 GLN GLN B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 ASN 29 29 29 ASN ASN B . n B 1 30 LEU 30 30 30 LEU LEU B . n B 1 31 HIS 31 31 31 HIS HIS B . n B 1 32 ASP 32 32 32 ASP ASP B . n B 1 33 MSE 33 33 33 MSE MSE B . n B 1 34 ASN 34 34 34 ASN ASN B . n B 1 35 GLN 35 35 35 GLN GLN B . n B 1 36 GLN 36 36 36 GLN GLN B . n B 1 37 MSE 37 37 37 MSE MSE B . n B 1 38 GLU 38 38 38 GLU GLU B . n B 1 39 GLN 39 39 39 GLN GLN B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 PHE 41 41 41 PHE PHE B . n B 1 42 GLN 42 42 42 GLN GLN B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 PHE 44 44 44 PHE PHE B . n B 1 45 GLN 45 45 45 GLN GLN B . n B 1 46 HIS 46 46 46 HIS HIS B . n B 1 47 PHE 47 47 47 PHE PHE B . n B 1 48 MSE 48 48 48 MSE MSE B . n B 1 49 GLN 49 49 ? ? ? B . n B 1 50 GLY 50 50 ? ? ? B . n B 1 51 ASN 51 51 ? ? ? B . n B 1 52 GLN 52 52 ? ? ? B . n B 1 53 ASP 53 53 ? ? ? B . n B 1 54 ASP 54 54 ? ? ? B . n B 1 55 GLY 55 55 ? ? ? B . n B 1 56 LYS 56 56 56 LYS LYS B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 MSE 60 60 60 MSE MSE B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 HIS 62 62 62 HIS HIS B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 MSE 64 64 64 MSE MSE B . n B 1 65 GLN 65 65 65 GLN GLN B . n B 1 66 GLN 66 66 66 GLN GLN B . n B 1 67 PHE 67 67 67 PHE PHE B . n B 1 68 MSE 68 68 68 MSE MSE B . n B 1 69 ASN 69 69 69 ASN ASN B . n B 1 70 GLN 70 70 70 GLN GLN B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 ASP 72 72 72 ASP ASP B . n B 1 73 ASN 73 73 73 ASN ASN B . n B 1 74 HIS 74 74 74 HIS HIS B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 GLN 76 76 76 GLN GLN B . n B 1 77 SER 77 77 77 SER SER B . n B 1 78 GLU 78 78 78 GLU GLU B . n B 1 79 SER 79 79 79 SER SER B . n B 1 80 ASP 80 80 80 ASP ASP B . n B 1 81 THR 81 81 81 THR THR B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 HIS 83 83 83 HIS HIS B . n B 1 84 HIS 84 84 84 HIS HIS B . n B 1 85 PHE 85 85 85 PHE PHE B . n B 1 86 HIS 86 86 86 HIS HIS B . n B 1 87 ASN 87 87 87 ASN ASN B . n B 1 88 LYS 88 88 88 LYS LYS B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 GLN 90 90 90 GLN GLN B . n B 1 91 GLU 91 91 91 GLU GLU B . n B 1 92 LEU 92 92 92 LEU LEU B . n B 1 93 MSE 93 93 93 MSE MSE B . n B 1 94 ASN 94 94 94 ASN ASN B . n B 1 95 ASN 95 95 95 ASN ASN B . n B 1 96 PHE 96 96 96 PHE PHE B . n B 1 97 HIS 97 97 97 HIS HIS B . n B 1 98 HIS 98 98 98 HIS HIS B . n B 1 99 LEU 99 99 99 LEU LEU B . n B 1 100 VAL 100 100 100 VAL VAL B . n B 1 101 HIS 101 101 101 HIS HIS B . n B 1 102 ARG 102 102 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 201 201 K K A . D 3 HOH 1 103 1 HOH HOH A . D 3 HOH 2 104 2 HOH HOH A . D 3 HOH 3 105 4 HOH HOH A . D 3 HOH 4 106 5 HOH HOH A . D 3 HOH 5 107 7 HOH HOH A . D 3 HOH 6 108 11 HOH HOH A . D 3 HOH 7 109 13 HOH HOH A . D 3 HOH 8 110 18 HOH HOH A . D 3 HOH 9 111 19 HOH HOH A . D 3 HOH 10 112 21 HOH HOH A . D 3 HOH 11 113 24 HOH HOH A . D 3 HOH 12 114 26 HOH HOH A . D 3 HOH 13 115 28 HOH HOH A . D 3 HOH 14 116 29 HOH HOH A . D 3 HOH 15 117 31 HOH HOH A . D 3 HOH 16 118 33 HOH HOH A . D 3 HOH 17 119 34 HOH HOH A . D 3 HOH 18 120 35 HOH HOH A . D 3 HOH 19 121 36 HOH HOH A . D 3 HOH 20 122 37 HOH HOH A . D 3 HOH 21 123 40 HOH HOH A . D 3 HOH 22 124 42 HOH HOH A . D 3 HOH 23 125 43 HOH HOH A . D 3 HOH 24 126 47 HOH HOH A . D 3 HOH 25 127 49 HOH HOH A . D 3 HOH 26 128 50 HOH HOH A . D 3 HOH 27 129 54 HOH HOH A . D 3 HOH 28 130 55 HOH HOH A . E 3 HOH 1 103 3 HOH HOH B . E 3 HOH 2 104 6 HOH HOH B . E 3 HOH 3 105 8 HOH HOH B . E 3 HOH 4 106 9 HOH HOH B . E 3 HOH 5 107 10 HOH HOH B . E 3 HOH 6 108 12 HOH HOH B . E 3 HOH 7 109 14 HOH HOH B . E 3 HOH 8 110 15 HOH HOH B . E 3 HOH 9 111 16 HOH HOH B . E 3 HOH 10 112 17 HOH HOH B . E 3 HOH 11 113 20 HOH HOH B . E 3 HOH 12 114 22 HOH HOH B . E 3 HOH 13 115 23 HOH HOH B . E 3 HOH 14 116 25 HOH HOH B . E 3 HOH 15 117 27 HOH HOH B . E 3 HOH 16 118 30 HOH HOH B . E 3 HOH 17 119 32 HOH HOH B . E 3 HOH 18 120 38 HOH HOH B . E 3 HOH 19 121 39 HOH HOH B . E 3 HOH 20 122 41 HOH HOH B . E 3 HOH 21 123 44 HOH HOH B . E 3 HOH 22 124 45 HOH HOH B . E 3 HOH 23 125 46 HOH HOH B . E 3 HOH 24 126 48 HOH HOH B . E 3 HOH 25 127 51 HOH HOH B . E 3 HOH 26 128 52 HOH HOH B . E 3 HOH 27 129 53 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 33 A MSE 33 ? MET SELENOMETHIONINE 2 A MSE 37 A MSE 37 ? MET SELENOMETHIONINE 3 A MSE 48 A MSE 48 ? MET SELENOMETHIONINE 4 A MSE 60 A MSE 60 ? MET SELENOMETHIONINE 5 A MSE 64 A MSE 64 ? MET SELENOMETHIONINE 6 A MSE 68 A MSE 68 ? MET SELENOMETHIONINE 7 A MSE 93 A MSE 93 ? MET SELENOMETHIONINE 8 B MSE 33 B MSE 33 ? MET SELENOMETHIONINE 9 B MSE 37 B MSE 37 ? MET SELENOMETHIONINE 10 B MSE 48 B MSE 48 ? MET SELENOMETHIONINE 11 B MSE 60 B MSE 60 ? MET SELENOMETHIONINE 12 B MSE 64 B MSE 64 ? MET SELENOMETHIONINE 13 B MSE 68 B MSE 68 ? MET SELENOMETHIONINE 14 B MSE 93 B MSE 93 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6720 ? 1 MORE -71 ? 1 'SSA (A^2)' 11290 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A K 201 ? C K . 2 1 A HOH 118 ? D HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASN 51 ? A ASN 51 ? 1_555 K ? C K . ? A K 201 ? 1_555 O ? A MSE 48 ? A MSE 48 ? 1_555 76.8 ? 2 O ? A ASN 51 ? A ASN 51 ? 1_555 K ? C K . ? A K 201 ? 1_555 O ? A GLN 49 ? A GLN 49 ? 1_555 87.2 ? 3 O ? A MSE 48 ? A MSE 48 ? 1_555 K ? C K . ? A K 201 ? 1_555 O ? A GLN 49 ? A GLN 49 ? 1_555 65.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-28 2 'Structure model' 1 1 2013-07-17 3 'Structure model' 1 2 2017-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 30.6364 25.6290 37.3327 0.8700 0.3629 0.6830 -0.2192 0.1607 0.3855 27.6216 5.6235 16.1982 7.6448 -20.9149 -5.7150 -1.4039 -0.3107 1.7146 -0.6408 -2.6133 -0.4511 0.1864 1.4945 0.0506 'X-RAY DIFFRACTION' 2 ? refined 46.3594 34.0138 24.6354 0.2640 0.1555 0.2601 0.1238 -0.0015 0.1659 24.4505 13.9627 23.3843 13.8467 -19.1073 -9.9102 -0.0305 -0.6975 0.7281 -1.1865 -1.1502 -0.3456 0.5896 0.5976 1.3064 'X-RAY DIFFRACTION' 3 ? refined 56.6353 41.9306 12.2604 0.1857 0.3009 0.3243 0.0333 0.0212 0.0565 11.4389 2.8320 18.7952 6.4570 -12.8830 -6.1033 -0.3392 -0.1647 0.5039 -0.4807 -0.4802 -0.1088 -0.0538 0.5751 0.7300 'X-RAY DIFFRACTION' 4 ? refined 63.4380 46.2890 2.9430 0.1265 0.2697 0.1769 -0.0182 -0.0004 -0.0396 16.6173 12.9765 15.3387 9.2067 -7.2822 -10.2101 0.0273 -0.3639 0.3365 -0.1931 -0.8030 -0.6032 0.1263 -0.4393 0.8278 'X-RAY DIFFRACTION' 5 ? refined 58.2513 47.1984 -6.3731 0.1393 0.2828 0.1470 -0.0190 0.0099 0.0058 26.7312 3.6497 6.3765 8.3822 -5.4318 -1.5096 -0.3183 0.1636 0.1548 0.7789 -0.9257 -0.1436 -0.1573 0.0249 0.0158 'X-RAY DIFFRACTION' 6 ? refined 48.7803 43.8285 2.8019 0.1617 0.2291 0.2436 -0.0461 0.0138 0.0442 14.0920 1.2693 20.8494 -3.8551 -11.5261 -1.6590 0.0048 -0.0511 0.0463 0.2949 0.2393 -0.4104 -0.1783 0.5598 -0.5949 'X-RAY DIFFRACTION' 7 ? refined 37.0998 41.4247 15.9061 0.1726 0.2433 0.1732 -0.0778 -0.0207 -0.0487 13.2757 1.1298 16.5575 3.1988 -12.6869 -4.6949 -0.2072 0.2466 -0.0394 0.8674 -0.0366 0.0822 -0.0170 0.0556 -1.1278 'X-RAY DIFFRACTION' 8 ? refined 26.2727 41.5681 28.8382 0.3930 0.3504 0.1694 0.0038 -0.1496 0.0479 27.5619 2.5127 12.6256 -8.2684 -17.0780 2.0388 0.3499 0.0021 -0.3519 1.3221 0.3600 0.3374 -1.0431 0.3335 -1.2213 'X-RAY DIFFRACTION' 9 ? refined 19.7467 42.0146 39.0644 0.1772 0.2203 0.1803 -0.0122 0.0442 0.0310 25.9236 13.5417 9.5788 -3.9927 -7.8002 -0.4144 0.0294 0.2754 -0.3048 -0.8823 0.3989 0.5210 0.9027 -0.3777 0.0150 'X-RAY DIFFRACTION' 10 ? refined 50.9041 33.0900 7.4887 0.6095 0.1788 0.5803 0.2231 -0.0187 -0.2428 27.5608 14.7007 30.7429 15.8692 -26.8970 -13.4271 -1.0242 -0.6330 1.6572 0.0735 -1.9019 -1.1708 -0.0396 2.6776 0.5843 'X-RAY DIFFRACTION' 11 ? refined 33.9538 30.8334 21.8784 0.4690 0.1998 0.4136 -0.1986 0.0136 -0.0261 24.3101 11.1144 12.3366 -1.0574 -15.0135 2.8106 -0.4380 0.0436 0.3944 0.3371 -0.6758 -0.0765 -0.4780 1.0251 -0.5216 'X-RAY DIFFRACTION' 12 ? refined 21.4631 30.3706 32.7210 0.3968 0.2897 0.1819 -0.2973 -0.0844 -0.0353 32.6733 34.7851 36.5383 -7.2980 -29.6389 -15.8059 -0.5243 0.1431 0.3812 1.2934 -0.7093 -0.1035 -1.0091 1.3796 -1.3190 'X-RAY DIFFRACTION' 13 ? refined 16.0832 31.3706 42.8730 0.4379 0.5807 0.6787 -0.2105 0.0836 0.1453 19.0098 5.8860 -2.3741 -0.3314 -7.1066 3.7453 -1.6801 0.5398 1.1403 -0.2675 -1.6397 0.1309 0.2397 -0.3619 -0.6434 'X-RAY DIFFRACTION' 14 ? refined 24.6081 34.3885 46.5188 0.5334 0.3838 0.1983 -0.0604 0.1206 0.1749 39.4016 14.6127 54.6789 15.4023 -3.2351 -22.7285 0.3381 0.1949 -0.5330 -1.9657 -1.2026 0.5689 0.5042 3.2062 -0.7690 'X-RAY DIFFRACTION' 15 ? refined 32.7648 38.4446 36.9604 0.1643 0.2822 0.1724 -0.0547 0.0030 0.0368 11.5660 5.0872 14.7831 3.1290 -10.9407 -3.9905 -0.0091 -0.0569 0.0659 -0.6527 -0.3050 0.3347 0.2186 -0.0026 0.1981 'X-RAY DIFFRACTION' 16 ? refined 42.4927 44.5156 23.2966 0.1810 0.1874 0.1686 -0.0362 -0.0154 0.0048 7.6750 2.0898 11.4113 3.5732 -7.7072 -2.5565 0.2186 -0.0406 -0.1780 -0.2477 0.3634 0.2212 0.0809 -0.3834 0.0809 'X-RAY DIFFRACTION' 17 ? refined 50.8629 50.7167 12.5525 0.1469 0.1744 0.1576 0.0016 0.0332 -0.0281 13.9087 11.4938 21.6724 6.3717 -10.7130 -12.0021 0.0159 -0.0426 0.0267 -0.1422 0.2605 0.5035 0.4577 -0.6666 0.1721 'X-RAY DIFFRACTION' 18 ? refined 54.8099 54.9596 3.5094 0.1895 0.2255 0.1550 -0.0892 -0.0307 0.0383 20.6767 18.2927 21.6151 0.2911 -12.4470 -4.3646 0.1539 0.3504 -0.5043 0.6427 0.8788 0.2819 -0.1404 -1.0440 -0.0979 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 3 A 18 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 19 A 32 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 33 A 41 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 42 A 49 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 50 A 62 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 A 63 A 69 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 A 70 A 85 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 A 86 A 92 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 A 93 A 101 ? . . . . ? 'X-RAY DIFFRACTION' 10 10 B 5 B 22 ? . . . . ? 'X-RAY DIFFRACTION' 11 11 B 23 B 34 ? . . . . ? 'X-RAY DIFFRACTION' 12 12 B 35 B 43 ? . . . . ? 'X-RAY DIFFRACTION' 13 13 B 44 B 56 ? . . . . ? 'X-RAY DIFFRACTION' 14 14 B 57 B 64 ? . . . . ? 'X-RAY DIFFRACTION' 15 15 B 65 B 74 ? . . . . ? 'X-RAY DIFFRACTION' 16 16 B 75 B 87 ? . . . . ? 'X-RAY DIFFRACTION' 17 17 B 88 B 95 ? . . . . ? 'X-RAY DIFFRACTION' 18 18 B 96 B 101 ? . . . . ? # _pdbx_phasing_dm.entry_id 3VJF _pdbx_phasing_dm.fom_acentric 0.770 _pdbx_phasing_dm.fom_centric 0.700 _pdbx_phasing_dm.fom 0.760 _pdbx_phasing_dm.reflns_acentric 9219 _pdbx_phasing_dm.reflns_centric 1752 _pdbx_phasing_dm.reflns 10971 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 6.300 31.401 ? ? 0.950 0.880 0.920 332 208 540 3.900 6.300 ? ? 0.960 0.880 0.940 1198 355 1553 3.100 3.900 ? ? 0.930 0.830 0.910 1569 334 1903 2.800 3.100 ? ? 0.840 0.620 0.810 1629 285 1914 2.400 2.800 ? ? 0.690 0.520 0.670 2893 414 3307 2.200 2.400 ? ? 0.480 0.360 0.470 1598 156 1754 # _phasing.method MAD # _phasing_MAD_clust.expt_id 1 _phasing_MAD_clust.id '3 wavelength' _phasing_MAD_clust.number_set ? # _phasing_MAD_expt.id 1 _phasing_MAD_expt.mean_fom ? # loop_ _phasing_MAD_set.expt_id _phasing_MAD_set.clust_id _phasing_MAD_set.set_id _phasing_MAD_set.wavelength _phasing_MAD_set.pdbx_f_prime_refined _phasing_MAD_set.pdbx_f_double_prime_refined 1 '3 wavelength' 1 0.9788 -6.89 6.38 1 '3 wavelength' 2 0.9791 -9.77 3.97 1 '3 wavelength' 3 0.9000 -2.98 3.21 # loop_ _phasing_set.id _phasing_set.pdbx_d_res_high _phasing_set.pdbx_d_res_low 1 . . 2 . . 3 . . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 SOLVE 2.13 24-Feb-2008 program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 RESOLVE 2.13 1-Jun-2008 program 'Thomas C. Terwilliger' terwilliger@lanl.gov phasing http://www.solve.lanl.gov/ ? ? 5 REFMAC refmac_5.5.0109 24/04/2001 program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 6 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 7 SERGUI . ? ? ? ? 'data collection' ? ? ? 8 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 9 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 6 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -69.08 _pdbx_validate_torsion.psi 43.07 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A TYR 2 ? A TYR 2 3 1 Y 1 A ARG 102 ? A ARG 102 4 1 Y 1 B MSE 1 ? B MSE 1 5 1 Y 1 B TYR 2 ? B TYR 2 6 1 Y 1 B GLY 3 ? B GLY 3 7 1 Y 1 B LYS 4 ? B LYS 4 8 1 Y 1 B GLN 49 ? B GLN 49 9 1 Y 1 B GLY 50 ? B GLY 50 10 1 Y 1 B ASN 51 ? B ASN 51 11 1 Y 1 B GLN 52 ? B GLN 52 12 1 Y 1 B ASP 53 ? B ASP 53 13 1 Y 1 B ASP 54 ? B ASP 54 14 1 Y 1 B GLY 55 ? B GLY 55 15 1 Y 1 B ARG 102 ? B ARG 102 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 water HOH #