data_3VKE # _entry.id 3VKE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VKE pdb_00003vke 10.2210/pdb3vke/pdb NDB NA1384 ? ? RCSB RCSB095154 ? ? WWPDB D_1000095154 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1ztg _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3VKE _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2011-11-15 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Traore, D.A.K.' 1 'Wilce, M.C.J.' 2 'Wilce, J.A.' 3 # _citation.id primary _citation.title ;Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 40 _citation.page_first 5101 _citation.page_last 5114 _citation.year 2012 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22344691 _citation.pdbx_database_id_DOI 10.1093/nar/gks058 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yoga, Y.M.K.' 1 ? primary 'Traore, D.A.K.' 2 ? primary 'Sidiqi, M.' 3 ? primary 'Szeto, C.' 4 ? primary 'Pendini, N.R.' 5 ? primary 'Barker, A.' 6 ? primary 'Leedman, P.J.' 7 ? primary 'Wilce, J.A.' 8 ? primary 'Wilce, M.C.J.' 9 ? # _cell.entry_id 3VKE _cell.length_a 38.597 _cell.length_b 114.887 _cell.length_c 43.429 _cell.angle_alpha 90.00 _cell.angle_beta 93.73 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VKE _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Poly(rC)-binding protein 1' 8462.802 4 ? C54S 'KH1 domain' ? 2 polymer syn ;DNA (5'-D(P*AP*CP*CP*CP*CP*A)-3') ; 1738.183 4 ? ? ? ? 3 water nat water 18.015 71 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alpha-CP1, Heterogeneous nuclear ribonucleoprotein E1, hnRNP E1, Nucleic acid-binding protein SUB2.3' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no HMLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNSPERIITLTGPTNAIFKAFAMIIDKLEEDINSSW HMLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNSPERIITLTGPTNAIFKAFAMIIDKLEEDINSSW A,B,C,D ? 2 polydeoxyribonucleotide no no '(DA)(DC)(DC)(DC)(DC)(DA)' ACCCCA R,S,T,U ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 MET n 1 3 LEU n 1 4 THR n 1 5 ILE n 1 6 ARG n 1 7 LEU n 1 8 LEU n 1 9 MET n 1 10 HIS n 1 11 GLY n 1 12 LYS n 1 13 GLU n 1 14 VAL n 1 15 GLY n 1 16 SER n 1 17 ILE n 1 18 ILE n 1 19 GLY n 1 20 LYS n 1 21 LYS n 1 22 GLY n 1 23 GLU n 1 24 SER n 1 25 VAL n 1 26 LYS n 1 27 ARG n 1 28 ILE n 1 29 ARG n 1 30 GLU n 1 31 GLU n 1 32 SER n 1 33 GLY n 1 34 ALA n 1 35 ARG n 1 36 ILE n 1 37 ASN n 1 38 ILE n 1 39 SER n 1 40 GLU n 1 41 GLY n 1 42 ASN n 1 43 SER n 1 44 PRO n 1 45 GLU n 1 46 ARG n 1 47 ILE n 1 48 ILE n 1 49 THR n 1 50 LEU n 1 51 THR n 1 52 GLY n 1 53 PRO n 1 54 THR n 1 55 ASN n 1 56 ALA n 1 57 ILE n 1 58 PHE n 1 59 LYS n 1 60 ALA n 1 61 PHE n 1 62 ALA n 1 63 MET n 1 64 ILE n 1 65 ILE n 1 66 ASP n 1 67 LYS n 1 68 LEU n 1 69 GLU n 1 70 GLU n 1 71 ASP n 1 72 ILE n 1 73 ASN n 1 74 SER n 1 75 SER n 1 76 TRP n 2 1 DA n 2 2 DC n 2 3 DC n 2 4 DC n 2 5 DC n 2 6 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PCBP1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP PCBP1_HUMAN Q15365 1 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSS 14 ? 2 PDB 3VKE 3VKE 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VKE A 3 ? 75 ? Q15365 14 ? 86 ? 14 86 2 1 3VKE B 3 ? 75 ? Q15365 14 ? 86 ? 14 86 3 1 3VKE C 3 ? 75 ? Q15365 14 ? 86 ? 14 86 4 1 3VKE D 3 ? 75 ? Q15365 14 ? 86 ? 14 86 5 2 3VKE R 1 ? 6 ? 3VKE 1 ? 6 ? 1 6 6 2 3VKE S 1 ? 6 ? 3VKE 1 ? 6 ? 1 6 7 2 3VKE T 1 ? 6 ? 3VKE 1 ? 6 ? 1 6 8 2 3VKE U 1 ? 6 ? 3VKE 1 ? 6 ? 1 6 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3VKE HIS A 1 ? UNP Q15365 ? ? 'expression tag' 12 1 1 3VKE MET A 2 ? UNP Q15365 ? ? 'expression tag' 13 2 1 3VKE SER A 43 ? UNP Q15365 CYS 54 'engineered mutation' 54 3 1 3VKE TRP A 76 ? UNP Q15365 ? ? 'expression tag' 87 4 2 3VKE HIS B 1 ? UNP Q15365 ? ? 'expression tag' 12 5 2 3VKE MET B 2 ? UNP Q15365 ? ? 'expression tag' 13 6 2 3VKE SER B 43 ? UNP Q15365 CYS 54 'engineered mutation' 54 7 2 3VKE TRP B 76 ? UNP Q15365 ? ? 'expression tag' 87 8 3 3VKE HIS C 1 ? UNP Q15365 ? ? 'expression tag' 12 9 3 3VKE MET C 2 ? UNP Q15365 ? ? 'expression tag' 13 10 3 3VKE SER C 43 ? UNP Q15365 CYS 54 'engineered mutation' 54 11 3 3VKE TRP C 76 ? UNP Q15365 ? ? 'expression tag' 87 12 4 3VKE HIS D 1 ? UNP Q15365 ? ? 'expression tag' 12 13 4 3VKE MET D 2 ? UNP Q15365 ? ? 'expression tag' 13 14 4 3VKE SER D 43 ? UNP Q15365 CYS 54 'engineered mutation' 54 15 4 3VKE TRP D 76 ? UNP Q15365 ? ? 'expression tag' 87 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3VKE _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 47.77 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '0.1M phosphate-citrate, 40%(v/v) PEG 300, pH 4.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-03-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9801 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX1' _diffrn_source.pdbx_wavelength_list 0.9801 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' _diffrn_source.pdbx_synchrotron_beamline MX1 # _reflns.entry_id 3VKE _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 3 _reflns.d_resolution_high 1.77 _reflns.d_resolution_low 38.51 _reflns.number_all ? _reflns.number_obs 36143 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.090 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3VKE _refine.ls_d_res_high 1.7700 _refine.ls_d_res_low 27.1600 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 100.0000 _refine.ls_number_reflns_obs 35997 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1636 _refine.ls_R_factor_R_work 0.1610 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2134 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1808 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 31.5288 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -2.3600 _refine.aniso_B[2][2] 1.6300 _refine.aniso_B[3][3] 0.5200 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -1.6800 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9630 _refine.correlation_coeff_Fo_to_Fc_free 0.9440 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1070 _refine.overall_SU_ML 0.0650 _refine.overall_SU_B 4.4840 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 1ZTG _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 90.590 _refine.B_iso_min 13.060 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R 0.1450 _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2237 _refine_hist.pdbx_number_atoms_nucleic_acid 388 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 71 _refine_hist.number_atoms_total 2696 _refine_hist.d_res_high 1.7700 _refine_hist.d_res_low 27.1600 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2632 0.027 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3602 2.243 2.159 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 293 5.433 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 73 35.111 23.288 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 433 16.230 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 17 25.703 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 435 0.157 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1739 0.011 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1448 2.409 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2330 3.962 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 1184 5.850 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 1270 8.277 4.500 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2632 3.115 3.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.7700 _refine_ls_shell.d_res_low 1.8160 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.number_reflns_R_work 2592 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.1870 _refine_ls_shell.R_factor_R_free 0.2900 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 137 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2729 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3VKE _struct.title ;Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VKE _struct_keywords.text 'PCBP-1, DNA RNA BINDING PROTEIN, KH DOMAIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 11 ? GLY A 19 ? GLY A 22 GLY A 30 1 ? 9 HELX_P HELX_P2 2 GLY A 22 ? GLY A 33 ? GLY A 33 GLY A 44 1 ? 12 HELX_P HELX_P3 3 THR A 54 ? ASP A 71 ? THR A 65 ASP A 82 1 ? 18 HELX_P HELX_P4 4 GLY B 11 ? GLY B 19 ? GLY B 22 GLY B 30 1 ? 9 HELX_P HELX_P5 5 GLY B 22 ? GLY B 33 ? GLY B 33 GLY B 44 1 ? 12 HELX_P HELX_P6 6 PRO B 53 ? SER B 75 ? PRO B 64 SER B 86 1 ? 23 HELX_P HELX_P7 7 GLY C 11 ? GLY C 19 ? GLY C 22 GLY C 30 1 ? 9 HELX_P HELX_P8 8 GLY C 22 ? GLY C 33 ? GLY C 33 GLY C 44 1 ? 12 HELX_P HELX_P9 9 PRO C 53 ? ASP C 71 ? PRO C 64 ASP C 82 1 ? 19 HELX_P HELX_P10 10 GLY D 11 ? GLY D 19 ? GLY D 22 GLY D 30 1 ? 9 HELX_P HELX_P11 11 GLY D 22 ? GLY D 33 ? GLY D 33 GLY D 44 1 ? 12 HELX_P HELX_P12 12 PRO D 53 ? ILE D 72 ? PRO D 64 ILE D 83 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ILE _struct_mon_prot_cis.label_seq_id 72 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ILE _struct_mon_prot_cis.auth_seq_id 83 _struct_mon_prot_cis.auth_asym_id D _struct_mon_prot_cis.pdbx_label_comp_id_2 ASN _struct_mon_prot_cis.pdbx_label_seq_id_2 73 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ASN _struct_mon_prot_cis.pdbx_auth_seq_id_2 84 _struct_mon_prot_cis.pdbx_auth_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.32 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 35 ? ILE A 38 ? ARG A 46 ILE A 49 A 2 GLU A 45 ? PRO A 53 ? GLU A 56 PRO A 64 A 3 MET A 2 ? HIS A 10 ? MET A 13 HIS A 21 A 4 LEU C 3 ? HIS C 10 ? LEU C 14 HIS C 21 A 5 GLU C 45 ? GLY C 52 ? GLU C 56 GLY C 63 A 6 ARG C 35 ? ILE C 38 ? ARG C 46 ILE C 49 B 1 ARG B 35 ? ILE B 38 ? ARG B 46 ILE B 49 B 2 GLU B 45 ? GLY B 52 ? GLU B 56 GLY B 63 B 3 LEU B 3 ? HIS B 10 ? LEU B 14 HIS B 21 B 4 LEU D 3 ? HIS D 10 ? LEU D 14 HIS D 21 B 5 GLU D 45 ? GLY D 52 ? GLU D 56 GLY D 63 B 6 ARG D 35 ? ILE D 38 ? ARG D 46 ILE D 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 37 ? N ASN A 48 O THR A 49 ? O THR A 60 A 2 3 O LEU A 50 ? O LEU A 61 N ILE A 5 ? N ILE A 16 A 3 4 N ARG A 6 ? N ARG A 17 O LEU C 8 ? O LEU C 19 A 4 5 N LEU C 7 ? N LEU C 18 O ILE C 48 ? O ILE C 59 A 5 6 O THR C 49 ? O THR C 60 N ASN C 37 ? N ASN C 48 B 1 2 N ASN B 37 ? N ASN B 48 O THR B 49 ? O THR B 60 B 2 3 O ILE B 48 ? O ILE B 59 N LEU B 7 ? N LEU B 18 B 3 4 N ARG B 6 ? N ARG B 17 O LEU D 8 ? O LEU D 19 B 4 5 N LEU D 7 ? N LEU D 18 O ILE D 48 ? O ILE D 59 B 5 6 O THR D 49 ? O THR D 60 N ASN D 37 ? N ASN D 48 # _atom_sites.entry_id 3VKE _atom_sites.fract_transf_matrix[1][1] 0.025909 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001689 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008704 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023075 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 12 12 HIS HIS A . n A 1 2 MET 2 13 13 MET MET A . n A 1 3 LEU 3 14 14 LEU LEU A . n A 1 4 THR 4 15 15 THR THR A . n A 1 5 ILE 5 16 16 ILE ILE A . n A 1 6 ARG 6 17 17 ARG ARG A . n A 1 7 LEU 7 18 18 LEU LEU A . n A 1 8 LEU 8 19 19 LEU LEU A . n A 1 9 MET 9 20 20 MET MET A . n A 1 10 HIS 10 21 21 HIS HIS A . n A 1 11 GLY 11 22 22 GLY GLY A . n A 1 12 LYS 12 23 23 LYS LYS A . n A 1 13 GLU 13 24 24 GLU GLU A . n A 1 14 VAL 14 25 25 VAL VAL A . n A 1 15 GLY 15 26 26 GLY GLY A . n A 1 16 SER 16 27 27 SER SER A . n A 1 17 ILE 17 28 28 ILE ILE A . n A 1 18 ILE 18 29 29 ILE ILE A . n A 1 19 GLY 19 30 30 GLY GLY A . n A 1 20 LYS 20 31 31 LYS LYS A . n A 1 21 LYS 21 32 32 LYS LYS A . n A 1 22 GLY 22 33 33 GLY GLY A . n A 1 23 GLU 23 34 34 GLU GLU A . n A 1 24 SER 24 35 35 SER SER A . n A 1 25 VAL 25 36 36 VAL VAL A . n A 1 26 LYS 26 37 37 LYS LYS A . n A 1 27 ARG 27 38 38 ARG ARG A . n A 1 28 ILE 28 39 39 ILE ILE A . n A 1 29 ARG 29 40 40 ARG ARG A . n A 1 30 GLU 30 41 41 GLU GLU A . n A 1 31 GLU 31 42 42 GLU GLU A . n A 1 32 SER 32 43 43 SER SER A . n A 1 33 GLY 33 44 44 GLY GLY A . n A 1 34 ALA 34 45 45 ALA ALA A . n A 1 35 ARG 35 46 46 ARG ARG A . n A 1 36 ILE 36 47 47 ILE ILE A . n A 1 37 ASN 37 48 48 ASN ASN A . n A 1 38 ILE 38 49 49 ILE ILE A . n A 1 39 SER 39 50 50 SER SER A . n A 1 40 GLU 40 51 51 GLU GLU A . n A 1 41 GLY 41 52 52 GLY GLY A . n A 1 42 ASN 42 53 53 ASN ASN A . n A 1 43 SER 43 54 54 SER SER A . n A 1 44 PRO 44 55 55 PRO PRO A . n A 1 45 GLU 45 56 56 GLU GLU A . n A 1 46 ARG 46 57 57 ARG ARG A . n A 1 47 ILE 47 58 58 ILE ILE A . n A 1 48 ILE 48 59 59 ILE ILE A . n A 1 49 THR 49 60 60 THR THR A . n A 1 50 LEU 50 61 61 LEU LEU A . n A 1 51 THR 51 62 62 THR THR A . n A 1 52 GLY 52 63 63 GLY GLY A . n A 1 53 PRO 53 64 64 PRO PRO A . n A 1 54 THR 54 65 65 THR THR A . n A 1 55 ASN 55 66 66 ASN ASN A . n A 1 56 ALA 56 67 67 ALA ALA A . n A 1 57 ILE 57 68 68 ILE ILE A . n A 1 58 PHE 58 69 69 PHE PHE A . n A 1 59 LYS 59 70 70 LYS LYS A . n A 1 60 ALA 60 71 71 ALA ALA A . n A 1 61 PHE 61 72 72 PHE PHE A . n A 1 62 ALA 62 73 73 ALA ALA A . n A 1 63 MET 63 74 74 MET MET A . n A 1 64 ILE 64 75 75 ILE ILE A . n A 1 65 ILE 65 76 76 ILE ILE A . n A 1 66 ASP 66 77 77 ASP ASP A . n A 1 67 LYS 67 78 78 LYS LYS A . n A 1 68 LEU 68 79 79 LEU LEU A . n A 1 69 GLU 69 80 80 GLU GLU A . n A 1 70 GLU 70 81 81 GLU GLU A . n A 1 71 ASP 71 82 82 ASP ASP A . n A 1 72 ILE 72 83 83 ILE ILE A . n A 1 73 ASN 73 84 84 ASN ASN A . n A 1 74 SER 74 85 85 SER SER A . n A 1 75 SER 75 86 86 SER SER A . n A 1 76 TRP 76 87 87 TRP TRP A . n B 1 1 HIS 1 12 ? ? ? B . n B 1 2 MET 2 13 13 MET MET B . n B 1 3 LEU 3 14 14 LEU LEU B . n B 1 4 THR 4 15 15 THR THR B . n B 1 5 ILE 5 16 16 ILE ILE B . n B 1 6 ARG 6 17 17 ARG ARG B . n B 1 7 LEU 7 18 18 LEU LEU B . n B 1 8 LEU 8 19 19 LEU LEU B . n B 1 9 MET 9 20 20 MET MET B . n B 1 10 HIS 10 21 21 HIS HIS B . n B 1 11 GLY 11 22 22 GLY GLY B . n B 1 12 LYS 12 23 23 LYS LYS B . n B 1 13 GLU 13 24 24 GLU GLU B . n B 1 14 VAL 14 25 25 VAL VAL B . n B 1 15 GLY 15 26 26 GLY GLY B . n B 1 16 SER 16 27 27 SER SER B . n B 1 17 ILE 17 28 28 ILE ILE B . n B 1 18 ILE 18 29 29 ILE ILE B . n B 1 19 GLY 19 30 30 GLY GLY B . n B 1 20 LYS 20 31 31 LYS LYS B . n B 1 21 LYS 21 32 32 LYS LYS B . n B 1 22 GLY 22 33 33 GLY GLY B . n B 1 23 GLU 23 34 34 GLU GLU B . n B 1 24 SER 24 35 35 SER SER B . n B 1 25 VAL 25 36 36 VAL VAL B . n B 1 26 LYS 26 37 37 LYS LYS B . n B 1 27 ARG 27 38 38 ARG ARG B . n B 1 28 ILE 28 39 39 ILE ILE B . n B 1 29 ARG 29 40 40 ARG ARG B . n B 1 30 GLU 30 41 41 GLU GLU B . n B 1 31 GLU 31 42 42 GLU GLU B . n B 1 32 SER 32 43 43 SER SER B . n B 1 33 GLY 33 44 44 GLY GLY B . n B 1 34 ALA 34 45 45 ALA ALA B . n B 1 35 ARG 35 46 46 ARG ARG B . n B 1 36 ILE 36 47 47 ILE ILE B . n B 1 37 ASN 37 48 48 ASN ASN B . n B 1 38 ILE 38 49 49 ILE ILE B . n B 1 39 SER 39 50 50 SER SER B . n B 1 40 GLU 40 51 51 GLU GLU B . n B 1 41 GLY 41 52 52 GLY GLY B . n B 1 42 ASN 42 53 53 ASN ASN B . n B 1 43 SER 43 54 54 SER SER B . n B 1 44 PRO 44 55 55 PRO PRO B . n B 1 45 GLU 45 56 56 GLU GLU B . n B 1 46 ARG 46 57 57 ARG ARG B . n B 1 47 ILE 47 58 58 ILE ILE B . n B 1 48 ILE 48 59 59 ILE ILE B . n B 1 49 THR 49 60 60 THR THR B . n B 1 50 LEU 50 61 61 LEU LEU B . n B 1 51 THR 51 62 62 THR THR B . n B 1 52 GLY 52 63 63 GLY GLY B . n B 1 53 PRO 53 64 64 PRO PRO B . n B 1 54 THR 54 65 65 THR THR B . n B 1 55 ASN 55 66 66 ASN ASN B . n B 1 56 ALA 56 67 67 ALA ALA B . n B 1 57 ILE 57 68 68 ILE ILE B . n B 1 58 PHE 58 69 69 PHE PHE B . n B 1 59 LYS 59 70 70 LYS LYS B . n B 1 60 ALA 60 71 71 ALA ALA B . n B 1 61 PHE 61 72 72 PHE PHE B . n B 1 62 ALA 62 73 73 ALA ALA B . n B 1 63 MET 63 74 74 MET MET B . n B 1 64 ILE 64 75 75 ILE ILE B . n B 1 65 ILE 65 76 76 ILE ILE B . n B 1 66 ASP 66 77 77 ASP ASP B . n B 1 67 LYS 67 78 78 LYS LYS B . n B 1 68 LEU 68 79 79 LEU LEU B . n B 1 69 GLU 69 80 80 GLU GLU B . n B 1 70 GLU 70 81 81 GLU GLU B . n B 1 71 ASP 71 82 82 ASP ASP B . n B 1 72 ILE 72 83 83 ILE ILE B . n B 1 73 ASN 73 84 84 ASN ASN B . n B 1 74 SER 74 85 85 SER SER B . n B 1 75 SER 75 86 86 SER SER B . n B 1 76 TRP 76 87 87 TRP TRP B . n C 1 1 HIS 1 12 ? ? ? C . n C 1 2 MET 2 13 13 MET MET C . n C 1 3 LEU 3 14 14 LEU LEU C . n C 1 4 THR 4 15 15 THR THR C . n C 1 5 ILE 5 16 16 ILE ILE C . n C 1 6 ARG 6 17 17 ARG ARG C . n C 1 7 LEU 7 18 18 LEU LEU C . n C 1 8 LEU 8 19 19 LEU LEU C . n C 1 9 MET 9 20 20 MET MET C . n C 1 10 HIS 10 21 21 HIS HIS C . n C 1 11 GLY 11 22 22 GLY GLY C . n C 1 12 LYS 12 23 23 LYS LYS C . n C 1 13 GLU 13 24 24 GLU GLU C . n C 1 14 VAL 14 25 25 VAL VAL C . n C 1 15 GLY 15 26 26 GLY GLY C . n C 1 16 SER 16 27 27 SER SER C . n C 1 17 ILE 17 28 28 ILE ILE C . n C 1 18 ILE 18 29 29 ILE ILE C . n C 1 19 GLY 19 30 30 GLY GLY C . n C 1 20 LYS 20 31 31 LYS LYS C . n C 1 21 LYS 21 32 32 LYS LYS C . n C 1 22 GLY 22 33 33 GLY GLY C . n C 1 23 GLU 23 34 34 GLU GLU C . n C 1 24 SER 24 35 35 SER SER C . n C 1 25 VAL 25 36 36 VAL VAL C . n C 1 26 LYS 26 37 37 LYS LYS C . n C 1 27 ARG 27 38 38 ARG ARG C . n C 1 28 ILE 28 39 39 ILE ILE C . n C 1 29 ARG 29 40 40 ARG ARG C . n C 1 30 GLU 30 41 41 GLU GLU C . n C 1 31 GLU 31 42 42 GLU GLU C . n C 1 32 SER 32 43 43 SER SER C . n C 1 33 GLY 33 44 44 GLY GLY C . n C 1 34 ALA 34 45 45 ALA ALA C . n C 1 35 ARG 35 46 46 ARG ARG C . n C 1 36 ILE 36 47 47 ILE ILE C . n C 1 37 ASN 37 48 48 ASN ASN C . n C 1 38 ILE 38 49 49 ILE ILE C . n C 1 39 SER 39 50 50 SER SER C . n C 1 40 GLU 40 51 51 GLU GLU C . n C 1 41 GLY 41 52 52 GLY GLY C . n C 1 42 ASN 42 53 53 ASN ASN C . n C 1 43 SER 43 54 54 SER SER C . n C 1 44 PRO 44 55 55 PRO PRO C . n C 1 45 GLU 45 56 56 GLU GLU C . n C 1 46 ARG 46 57 57 ARG ARG C . n C 1 47 ILE 47 58 58 ILE ILE C . n C 1 48 ILE 48 59 59 ILE ILE C . n C 1 49 THR 49 60 60 THR THR C . n C 1 50 LEU 50 61 61 LEU LEU C . n C 1 51 THR 51 62 62 THR THR C . n C 1 52 GLY 52 63 63 GLY GLY C . n C 1 53 PRO 53 64 64 PRO PRO C . n C 1 54 THR 54 65 65 THR THR C . n C 1 55 ASN 55 66 66 ASN ASN C . n C 1 56 ALA 56 67 67 ALA ALA C . n C 1 57 ILE 57 68 68 ILE ILE C . n C 1 58 PHE 58 69 69 PHE PHE C . n C 1 59 LYS 59 70 70 LYS LYS C . n C 1 60 ALA 60 71 71 ALA ALA C . n C 1 61 PHE 61 72 72 PHE PHE C . n C 1 62 ALA 62 73 73 ALA ALA C . n C 1 63 MET 63 74 74 MET MET C . n C 1 64 ILE 64 75 75 ILE ILE C . n C 1 65 ILE 65 76 76 ILE ILE C . n C 1 66 ASP 66 77 77 ASP ASP C . n C 1 67 LYS 67 78 78 LYS LYS C . n C 1 68 LEU 68 79 79 LEU LEU C . n C 1 69 GLU 69 80 80 GLU GLU C . n C 1 70 GLU 70 81 81 GLU GLU C . n C 1 71 ASP 71 82 82 ASP ASP C . n C 1 72 ILE 72 83 ? ? ? C . n C 1 73 ASN 73 84 ? ? ? C . n C 1 74 SER 74 85 ? ? ? C . n C 1 75 SER 75 86 ? ? ? C . n C 1 76 TRP 76 87 ? ? ? C . n D 1 1 HIS 1 12 ? ? ? D . n D 1 2 MET 2 13 13 MET MET D . n D 1 3 LEU 3 14 14 LEU LEU D . n D 1 4 THR 4 15 15 THR THR D . n D 1 5 ILE 5 16 16 ILE ILE D . n D 1 6 ARG 6 17 17 ARG ARG D . n D 1 7 LEU 7 18 18 LEU LEU D . n D 1 8 LEU 8 19 19 LEU LEU D . n D 1 9 MET 9 20 20 MET MET D . n D 1 10 HIS 10 21 21 HIS HIS D . n D 1 11 GLY 11 22 22 GLY GLY D . n D 1 12 LYS 12 23 23 LYS LYS D . n D 1 13 GLU 13 24 24 GLU GLU D . n D 1 14 VAL 14 25 25 VAL VAL D . n D 1 15 GLY 15 26 26 GLY GLY D . n D 1 16 SER 16 27 27 SER SER D . n D 1 17 ILE 17 28 28 ILE ILE D . n D 1 18 ILE 18 29 29 ILE ILE D . n D 1 19 GLY 19 30 30 GLY GLY D . n D 1 20 LYS 20 31 31 LYS LYS D . n D 1 21 LYS 21 32 32 LYS LYS D . n D 1 22 GLY 22 33 33 GLY GLY D . n D 1 23 GLU 23 34 34 GLU GLU D . n D 1 24 SER 24 35 35 SER SER D . n D 1 25 VAL 25 36 36 VAL VAL D . n D 1 26 LYS 26 37 37 LYS LYS D . n D 1 27 ARG 27 38 38 ARG ARG D . n D 1 28 ILE 28 39 39 ILE ILE D . n D 1 29 ARG 29 40 40 ARG ARG D . n D 1 30 GLU 30 41 41 GLU GLU D . n D 1 31 GLU 31 42 42 GLU GLU D . n D 1 32 SER 32 43 43 SER SER D . n D 1 33 GLY 33 44 44 GLY GLY D . n D 1 34 ALA 34 45 45 ALA ALA D . n D 1 35 ARG 35 46 46 ARG ARG D . n D 1 36 ILE 36 47 47 ILE ILE D . n D 1 37 ASN 37 48 48 ASN ASN D . n D 1 38 ILE 38 49 49 ILE ILE D . n D 1 39 SER 39 50 50 SER SER D . n D 1 40 GLU 40 51 51 GLU GLU D . n D 1 41 GLY 41 52 52 GLY GLY D . n D 1 42 ASN 42 53 53 ASN ASN D . n D 1 43 SER 43 54 54 SER SER D . n D 1 44 PRO 44 55 55 PRO PRO D . n D 1 45 GLU 45 56 56 GLU GLU D . n D 1 46 ARG 46 57 57 ARG ARG D . n D 1 47 ILE 47 58 58 ILE ILE D . n D 1 48 ILE 48 59 59 ILE ILE D . n D 1 49 THR 49 60 60 THR THR D . n D 1 50 LEU 50 61 61 LEU LEU D . n D 1 51 THR 51 62 62 THR THR D . n D 1 52 GLY 52 63 63 GLY GLY D . n D 1 53 PRO 53 64 64 PRO PRO D . n D 1 54 THR 54 65 65 THR THR D . n D 1 55 ASN 55 66 66 ASN ASN D . n D 1 56 ALA 56 67 67 ALA ALA D . n D 1 57 ILE 57 68 68 ILE ILE D . n D 1 58 PHE 58 69 69 PHE PHE D . n D 1 59 LYS 59 70 70 LYS LYS D . n D 1 60 ALA 60 71 71 ALA ALA D . n D 1 61 PHE 61 72 72 PHE PHE D . n D 1 62 ALA 62 73 73 ALA ALA D . n D 1 63 MET 63 74 74 MET MET D . n D 1 64 ILE 64 75 75 ILE ILE D . n D 1 65 ILE 65 76 76 ILE ILE D . n D 1 66 ASP 66 77 77 ASP ASP D . n D 1 67 LYS 67 78 78 LYS LYS D . n D 1 68 LEU 68 79 79 LEU LEU D . n D 1 69 GLU 69 80 80 GLU GLU D . n D 1 70 GLU 70 81 81 GLU GLU D . n D 1 71 ASP 71 82 82 ASP ASP D . n D 1 72 ILE 72 83 83 ILE ILE D . n D 1 73 ASN 73 84 84 ASN ASN D . n D 1 74 SER 74 85 ? ? ? D . n D 1 75 SER 75 86 ? ? ? D . n D 1 76 TRP 76 87 ? ? ? D . n E 2 1 DA 1 1 1 DA DA R . n E 2 2 DC 2 2 2 DC DC R . n E 2 3 DC 3 3 3 DC DC R . n E 2 4 DC 4 4 4 DC DC R . n E 2 5 DC 5 5 5 DC DC R . n E 2 6 DA 6 6 6 DA DA R . n F 2 1 DA 1 1 1 DA DA S . n F 2 2 DC 2 2 2 DC DC S . n F 2 3 DC 3 3 3 DC DC S . n F 2 4 DC 4 4 4 DC DC S . n F 2 5 DC 5 5 5 DC DC S . n F 2 6 DA 6 6 6 DA DA S . n G 2 1 DA 1 1 ? ? ? T . n G 2 2 DC 2 2 2 DC DC T . n G 2 3 DC 3 3 3 DC DC T . n G 2 4 DC 4 4 4 DC DC T . n G 2 5 DC 5 5 5 DC DC T . n G 2 6 DA 6 6 ? ? ? T . n H 2 1 DA 1 1 ? ? ? U . n H 2 2 DC 2 2 2 DC DC U . n H 2 3 DC 3 3 3 DC DC U . n H 2 4 DC 4 4 4 DC DC U . n H 2 5 DC 5 5 5 DC DC U . n H 2 6 DA 6 6 ? ? ? U . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 HOH 1 3 3 HOH HOH A . I 3 HOH 2 4 4 HOH HOH A . I 3 HOH 3 8 8 HOH HOH A . I 3 HOH 4 88 12 HOH HOH A . I 3 HOH 5 89 17 HOH HOH A . I 3 HOH 6 90 19 HOH HOH A . I 3 HOH 7 91 20 HOH HOH A . I 3 HOH 8 92 23 HOH HOH A . I 3 HOH 9 93 25 HOH HOH A . I 3 HOH 10 94 27 HOH HOH A . I 3 HOH 11 95 33 HOH HOH A . I 3 HOH 12 96 34 HOH HOH A . I 3 HOH 13 97 35 HOH HOH A . I 3 HOH 14 98 42 HOH HOH A . I 3 HOH 15 99 44 HOH HOH A . I 3 HOH 16 100 46 HOH HOH A . I 3 HOH 17 101 47 HOH HOH A . I 3 HOH 18 102 50 HOH HOH A . I 3 HOH 19 103 52 HOH HOH A . I 3 HOH 20 104 54 HOH HOH A . I 3 HOH 21 105 55 HOH HOH A . I 3 HOH 22 106 57 HOH HOH A . I 3 HOH 23 107 61 HOH HOH A . I 3 HOH 24 108 64 HOH HOH A . I 3 HOH 25 109 65 HOH HOH A . J 3 HOH 1 1 1 HOH HOH B . J 3 HOH 2 2 2 HOH HOH B . J 3 HOH 3 6 6 HOH HOH B . J 3 HOH 4 7 7 HOH HOH B . J 3 HOH 5 9 9 HOH HOH B . J 3 HOH 6 10 10 HOH HOH B . J 3 HOH 7 88 13 HOH HOH B . J 3 HOH 8 89 21 HOH HOH B . J 3 HOH 9 90 22 HOH HOH B . J 3 HOH 10 91 26 HOH HOH B . J 3 HOH 11 92 28 HOH HOH B . J 3 HOH 12 93 30 HOH HOH B . J 3 HOH 13 94 39 HOH HOH B . J 3 HOH 14 95 48 HOH HOH B . J 3 HOH 15 96 53 HOH HOH B . J 3 HOH 16 97 62 HOH HOH B . J 3 HOH 17 98 67 HOH HOH B . J 3 HOH 18 99 69 HOH HOH B . J 3 HOH 19 100 71 HOH HOH B . K 3 HOH 1 11 11 HOH HOH C . K 3 HOH 2 88 15 HOH HOH C . K 3 HOH 3 89 16 HOH HOH C . K 3 HOH 4 90 24 HOH HOH C . K 3 HOH 5 91 31 HOH HOH C . K 3 HOH 6 92 32 HOH HOH C . K 3 HOH 7 93 41 HOH HOH C . K 3 HOH 8 94 43 HOH HOH C . K 3 HOH 9 95 45 HOH HOH C . K 3 HOH 10 96 70 HOH HOH C . L 3 HOH 1 5 5 HOH HOH D . L 3 HOH 2 88 18 HOH HOH D . L 3 HOH 3 89 29 HOH HOH D . L 3 HOH 4 90 40 HOH HOH D . L 3 HOH 5 91 49 HOH HOH D . L 3 HOH 6 92 51 HOH HOH D . L 3 HOH 7 93 56 HOH HOH D . L 3 HOH 8 94 58 HOH HOH D . L 3 HOH 9 95 59 HOH HOH D . L 3 HOH 10 96 66 HOH HOH D . L 3 HOH 11 97 68 HOH HOH D . M 3 HOH 1 14 14 HOH HOH R . M 3 HOH 2 36 36 HOH HOH R . M 3 HOH 3 37 37 HOH HOH R . M 3 HOH 4 60 60 HOH HOH R . N 3 HOH 1 63 63 HOH HOH S . O 3 HOH 1 38 38 HOH HOH T . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 3 author_defined_assembly ? dimeric 2 4 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,E,I,M 2 1 B,F,J,N 3 1 C,G,K,O 4 1 D,H,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-29 2 'Structure model' 1 1 2013-07-17 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 Blu-Ice . ? ? ? ? 'data collection' ? ? ? 4 XDS . ? ? ? ? 'data reduction' ? ? ? 5 SCALA . ? ? ? ? 'data scaling' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 101 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 100 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.79 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OP2 T DC 2 ? ? 1_555 "O3'" U DC 5 ? ? 2_656 1.41 2 1 P T DC 2 ? ? 1_555 "O3'" U DC 5 ? ? 2_656 1.63 3 1 OP1 T DC 2 ? ? 1_555 "O3'" U DC 5 ? ? 2_656 1.73 4 1 "O3'" T DC 5 ? ? 1_555 OP2 U DC 2 ? ? 2_556 1.75 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A LYS 31 ? ? CD A LYS 31 ? ? 1.135 1.520 -0.385 0.034 N 2 1 CG B LYS 31 ? ? CD B LYS 31 ? ? 1.220 1.520 -0.300 0.034 N 3 1 CZ B ARG 38 ? ? NH1 B ARG 38 ? ? 1.405 1.326 0.079 0.013 N 4 1 CB C LYS 23 ? ? CG C LYS 23 ? ? 1.357 1.521 -0.164 0.027 N 5 1 CG C GLU 24 ? ? CD C GLU 24 ? ? 1.723 1.515 0.208 0.015 N 6 1 CG C GLU 56 ? ? CD C GLU 56 ? ? 1.626 1.515 0.111 0.015 N 7 1 CD D ARG 38 ? ? NE D ARG 38 ? ? 1.826 1.460 0.366 0.017 N 8 1 CG D GLU 42 ? ? CD D GLU 42 ? ? 1.345 1.515 -0.170 0.015 N 9 1 CG D GLU 80 ? ? CD D GLU 80 ? ? 1.203 1.515 -0.312 0.015 N 10 1 P R DA 1 ? ? "O5'" R DA 1 ? ? 1.108 1.593 -0.485 0.010 N 11 1 "O5'" R DA 6 ? ? "C5'" R DA 6 ? ? 1.229 1.418 -0.189 0.025 N 12 1 N3 R DA 6 ? ? C4 R DA 6 ? ? 1.381 1.344 0.037 0.006 N 13 1 P S DA 1 ? ? "O5'" S DA 1 ? ? 1.082 1.593 -0.511 0.010 N 14 1 C6 S DA 1 ? ? N6 S DA 1 ? ? 1.384 1.335 0.049 0.008 N 15 1 N3 S DA 6 ? ? C4 S DA 6 ? ? 1.382 1.344 0.038 0.006 N 16 1 C5 S DA 6 ? ? N7 S DA 6 ? ? 1.432 1.388 0.044 0.006 N 17 1 N9 S DA 6 ? ? C4 S DA 6 ? ? 1.416 1.374 0.042 0.006 N 18 1 "C5'" T DC 2 ? ? "C4'" T DC 2 ? ? 1.578 1.512 0.066 0.007 N 19 1 "O4'" T DC 2 ? ? "C1'" T DC 2 ? ? 1.491 1.420 0.071 0.011 N 20 1 "C1'" T DC 2 ? ? N1 T DC 2 ? ? 1.632 1.488 0.144 0.013 N 21 1 C2 T DC 2 ? ? O2 T DC 2 ? ? 1.161 1.240 -0.079 0.009 N 22 1 N1 T DC 2 ? ? C2 T DC 2 ? ? 1.458 1.397 0.061 0.010 N 23 1 "O3'" T DC 5 ? ? "C3'" T DC 5 ? ? 1.532 1.435 0.097 0.013 N 24 1 P U DC 2 ? ? "O5'" U DC 2 ? ? 1.907 1.593 0.314 0.010 N 25 1 N1 U DC 2 ? ? C2 U DC 2 ? ? 1.470 1.397 0.073 0.010 N 26 1 N1 U DC 4 ? ? C6 U DC 4 ? ? 1.408 1.367 0.041 0.006 N 27 1 "O3'" U DC 5 ? ? "C3'" U DC 5 ? ? 1.543 1.435 0.108 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LYS 31 ? ? CG A LYS 31 ? ? CD A LYS 31 ? ? 131.87 111.60 20.27 2.60 N 2 1 OE1 A GLU 80 ? ? CD A GLU 80 ? ? OE2 A GLU 80 ? ? 115.12 123.30 -8.18 1.20 N 3 1 NE B ARG 17 ? ? CZ B ARG 17 ? ? NH1 B ARG 17 ? ? 126.13 120.30 5.83 0.50 N 4 1 NE B ARG 17 ? ? CZ B ARG 17 ? ? NH2 B ARG 17 ? ? 115.43 120.30 -4.87 0.50 N 5 1 CD B ARG 38 ? ? NE B ARG 38 ? ? CZ B ARG 38 ? ? 132.55 123.60 8.95 1.40 N 6 1 NE B ARG 38 ? ? CZ B ARG 38 ? ? NH1 B ARG 38 ? ? 126.33 120.30 6.03 0.50 N 7 1 NE B ARG 38 ? ? CZ B ARG 38 ? ? NH2 B ARG 38 ? ? 113.32 120.30 -6.98 0.50 N 8 1 NE C ARG 40 ? ? CZ C ARG 40 ? ? NH1 C ARG 40 ? ? 129.01 120.30 8.71 0.50 N 9 1 NE C ARG 40 ? ? CZ C ARG 40 ? ? NH2 C ARG 40 ? ? 112.56 120.30 -7.74 0.50 N 10 1 CB C GLU 56 ? ? CG C GLU 56 ? ? CD C GLU 56 ? ? 94.29 114.20 -19.91 2.70 N 11 1 NE D ARG 17 ? ? CZ D ARG 17 ? ? NH1 D ARG 17 ? ? 124.68 120.30 4.38 0.50 N 12 1 NE D ARG 40 ? ? CZ D ARG 40 ? ? NH1 D ARG 40 ? ? 124.58 120.30 4.28 0.50 N 13 1 NE D ARG 40 ? ? CZ D ARG 40 ? ? NH2 D ARG 40 ? ? 116.17 120.30 -4.13 0.50 N 14 1 CG D GLU 80 ? ? CD D GLU 80 ? ? OE1 D GLU 80 ? ? 100.42 118.30 -17.88 2.00 N 15 1 P R DA 1 ? ? "O5'" R DA 1 ? ? "C5'" R DA 1 ? ? 149.15 120.90 28.25 1.60 N 16 1 C6 R DA 1 ? ? N1 R DA 1 ? ? C2 R DA 1 ? ? 123.29 118.60 4.69 0.60 N 17 1 N1 R DC 2 ? ? C2 R DC 2 ? ? O2 R DC 2 ? ? 124.27 118.90 5.37 0.60 N 18 1 "O4'" R DC 3 ? ? "C1'" R DC 3 ? ? N1 R DC 3 ? ? 101.11 108.00 -6.89 0.70 N 19 1 C4 R DC 5 ? ? C5 R DC 5 ? ? C6 R DC 5 ? ? 114.12 117.40 -3.28 0.50 N 20 1 "O5'" R DA 6 ? ? "C5'" R DA 6 ? ? "C4'" R DA 6 ? ? 98.13 109.40 -11.27 0.80 N 21 1 "C1'" R DA 6 ? ? "O4'" R DA 6 ? ? "C4'" R DA 6 ? ? 103.10 110.10 -7.00 1.00 N 22 1 "C4'" R DA 6 ? ? "C3'" R DA 6 ? ? "C2'" R DA 6 ? ? 91.79 102.20 -10.41 0.70 N 23 1 N1 R DA 6 ? ? C2 R DA 6 ? ? N3 R DA 6 ? ? 126.11 129.30 -3.19 0.50 N 24 1 N1 R DA 6 ? ? C6 R DA 6 ? ? N6 R DA 6 ? ? 122.52 118.60 3.92 0.60 N 25 1 "O5'" S DA 1 ? ? "C5'" S DA 1 ? ? "C4'" S DA 1 ? ? 101.32 109.40 -8.08 0.80 N 26 1 P S DA 1 ? ? "O5'" S DA 1 ? ? "C5'" S DA 1 ? ? 135.47 120.90 14.57 1.60 N 27 1 C6 S DA 1 ? ? N1 S DA 1 ? ? C2 S DA 1 ? ? 122.43 118.60 3.83 0.60 N 28 1 "C3'" S DA 1 ? ? "O3'" S DA 1 ? ? P S DC 2 ? ? 130.55 119.70 10.85 1.20 Y 29 1 "O4'" S DC 3 ? ? "C1'" S DC 3 ? ? N1 S DC 3 ? ? 102.33 108.00 -5.67 0.70 N 30 1 C2 S DC 3 ? ? N3 S DC 3 ? ? C4 S DC 3 ? ? 123.04 119.90 3.14 0.50 N 31 1 N9 S DA 6 ? ? "C1'" S DA 6 ? ? "C2'" S DA 6 ? ? 123.14 114.30 8.84 1.40 N 32 1 "O4'" S DA 6 ? ? "C1'" S DA 6 ? ? N9 S DA 6 ? ? 103.13 108.00 -4.87 0.70 N 33 1 N1 S DA 6 ? ? C2 S DA 6 ? ? N3 S DA 6 ? ? 125.18 129.30 -4.12 0.50 N 34 1 C2 S DA 6 ? ? N3 S DA 6 ? ? C4 S DA 6 ? ? 114.66 110.60 4.06 0.50 N 35 1 C5 S DA 6 ? ? C6 S DA 6 ? ? N1 S DA 6 ? ? 122.04 117.70 4.34 0.50 N 36 1 C5 S DA 6 ? ? C6 S DA 6 ? ? N6 S DA 6 ? ? 118.26 123.70 -5.44 0.80 N 37 1 "O5'" T DC 2 ? ? "C5'" T DC 2 ? ? "C4'" T DC 2 ? ? 129.96 111.00 18.96 2.50 N 38 1 "C5'" T DC 2 ? ? "C4'" T DC 2 ? ? "O4'" T DC 2 ? ? 122.16 109.80 12.36 1.10 N 39 1 "O4'" T DC 2 ? ? "C1'" T DC 2 ? ? N1 T DC 2 ? ? 113.18 108.30 4.88 0.30 N 40 1 C6 T DC 2 ? ? N1 T DC 2 ? ? C2 T DC 2 ? ? 114.10 120.30 -6.20 0.40 N 41 1 N1 T DC 2 ? ? C2 T DC 2 ? ? N3 T DC 2 ? ? 128.03 119.20 8.83 0.70 N 42 1 C2 T DC 2 ? ? N3 T DC 2 ? ? C4 T DC 2 ? ? 113.92 119.90 -5.98 0.50 N 43 1 C4 T DC 2 ? ? C5 T DC 2 ? ? C6 T DC 2 ? ? 125.54 117.40 8.14 0.50 N 44 1 N1 T DC 2 ? ? C2 T DC 2 ? ? O2 T DC 2 ? ? 126.28 118.90 7.38 0.60 N 45 1 N3 T DC 2 ? ? C2 T DC 2 ? ? O2 T DC 2 ? ? 105.61 121.90 -16.29 0.70 N 46 1 C2 T DC 2 ? ? N1 T DC 2 ? ? "C1'" T DC 2 ? ? 128.82 118.80 10.02 1.10 N 47 1 "O4'" T DC 3 ? ? "C1'" T DC 3 ? ? N1 T DC 3 ? ? 102.55 108.00 -5.45 0.70 N 48 1 P U DC 2 ? ? "O5'" U DC 2 ? ? "C5'" U DC 2 ? ? 104.33 120.90 -16.57 1.60 N 49 1 C6 U DC 2 ? ? N1 U DC 2 ? ? C2 U DC 2 ? ? 117.09 120.30 -3.21 0.40 N 50 1 C2 U DC 2 ? ? N3 U DC 2 ? ? C4 U DC 2 ? ? 116.20 119.90 -3.70 0.50 N 51 1 C4 U DC 2 ? ? C5 U DC 2 ? ? C6 U DC 2 ? ? 120.48 117.40 3.08 0.50 N 52 1 N1 U DC 2 ? ? C2 U DC 2 ? ? O2 U DC 2 ? ? 125.71 118.90 6.81 0.60 N 53 1 N3 U DC 2 ? ? C2 U DC 2 ? ? O2 U DC 2 ? ? 111.02 121.90 -10.88 0.70 N 54 1 N3 U DC 2 ? ? C4 U DC 2 ? ? N4 U DC 2 ? ? 113.19 118.00 -4.81 0.70 N 55 1 C2 U DC 2 ? ? N1 U DC 2 ? ? "C1'" U DC 2 ? ? 127.93 118.80 9.13 1.10 N 56 1 C6 U DC 5 ? ? N1 U DC 5 ? ? C2 U DC 5 ? ? 117.29 120.30 -3.01 0.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN B 53 ? ? -91.74 47.14 2 1 LYS D 32 ? ? 49.90 25.10 3 1 ASN D 53 ? ? -103.20 59.25 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id GLU _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 80 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.101 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 23 ? CG ? A LYS 12 CG 2 1 Y 0 A LYS 23 ? CD ? A LYS 12 CD 3 1 Y 0 A LYS 23 ? CE ? A LYS 12 CE 4 1 Y 0 A LYS 23 ? NZ ? A LYS 12 NZ 5 1 Y 0 A LYS 31 ? CD ? A LYS 20 CD 6 1 Y 0 A LYS 31 ? CE ? A LYS 20 CE 7 1 Y 0 A LYS 31 ? NZ ? A LYS 20 NZ 8 1 Y 0 A LYS 32 ? CD ? A LYS 21 CD 9 1 Y 0 A LYS 32 ? CE ? A LYS 21 CE 10 1 Y 0 A LYS 32 ? NZ ? A LYS 21 NZ 11 1 Y 1 A GLU 34 ? CG ? A GLU 23 CG 12 1 Y 1 A GLU 34 ? CD ? A GLU 23 CD 13 1 Y 1 A GLU 34 ? OE1 ? A GLU 23 OE1 14 1 Y 1 A GLU 34 ? OE2 ? A GLU 23 OE2 15 1 Y 0 A ASN 53 ? CG ? A ASN 42 CG 16 1 Y 0 A ASN 53 ? OD1 ? A ASN 42 OD1 17 1 Y 0 A ASN 53 ? ND2 ? A ASN 42 ND2 18 1 Y 0 A GLU 80 ? OE1 ? A GLU 69 OE1 19 1 Y 0 B LYS 23 ? CD ? B LYS 12 CD 20 1 Y 0 B LYS 23 ? CE ? B LYS 12 CE 21 1 Y 0 B LYS 23 ? NZ ? B LYS 12 NZ 22 1 Y 0 B LYS 31 ? CD ? B LYS 20 CD 23 1 Y 0 B LYS 31 ? CE ? B LYS 20 CE 24 1 Y 0 B LYS 31 ? NZ ? B LYS 20 NZ 25 1 Y 1 B GLU 34 ? CG ? B GLU 23 CG 26 1 Y 1 B GLU 34 ? CD ? B GLU 23 CD 27 1 Y 1 B GLU 34 ? OE1 ? B GLU 23 OE1 28 1 Y 1 B GLU 34 ? OE2 ? B GLU 23 OE2 29 1 Y 0 B GLU 80 ? CD ? B GLU 69 CD 30 1 Y 0 B GLU 80 ? OE1 ? B GLU 69 OE1 31 1 Y 0 B GLU 80 ? OE2 ? B GLU 69 OE2 32 1 Y 0 C LYS 23 ? CG ? C LYS 12 CG 33 1 Y 0 C LYS 23 ? CD ? C LYS 12 CD 34 1 Y 0 C LYS 23 ? CE ? C LYS 12 CE 35 1 Y 0 C LYS 23 ? NZ ? C LYS 12 NZ 36 1 Y 0 C GLU 24 ? CD ? C GLU 13 CD 37 1 Y 0 C GLU 24 ? OE1 ? C GLU 13 OE1 38 1 Y 0 C GLU 24 ? OE2 ? C GLU 13 OE2 39 1 Y 1 C GLU 34 ? CG ? C GLU 23 CG 40 1 Y 1 C GLU 34 ? CD ? C GLU 23 CD 41 1 Y 1 C GLU 34 ? OE1 ? C GLU 23 OE1 42 1 Y 1 C GLU 34 ? OE2 ? C GLU 23 OE2 43 1 Y 0 C ARG 38 ? CD ? C ARG 27 CD 44 1 Y 0 C ARG 38 ? NE ? C ARG 27 NE 45 1 Y 0 C ARG 38 ? CZ ? C ARG 27 CZ 46 1 Y 0 C ARG 38 ? NH1 ? C ARG 27 NH1 47 1 Y 0 C ARG 38 ? NH2 ? C ARG 27 NH2 48 1 Y 1 C GLU 42 ? CG ? C GLU 31 CG 49 1 Y 1 C GLU 42 ? CD ? C GLU 31 CD 50 1 Y 1 C GLU 42 ? OE1 ? C GLU 31 OE1 51 1 Y 1 C GLU 42 ? OE2 ? C GLU 31 OE2 52 1 Y 0 C ARG 46 ? CD ? C ARG 35 CD 53 1 Y 0 C ARG 46 ? NE ? C ARG 35 NE 54 1 Y 0 C ARG 46 ? CZ ? C ARG 35 CZ 55 1 Y 0 C ARG 46 ? NH1 ? C ARG 35 NH1 56 1 Y 0 C ARG 46 ? NH2 ? C ARG 35 NH2 57 1 Y 0 C GLU 56 ? CD ? C GLU 45 CD 58 1 Y 0 C GLU 56 ? OE1 ? C GLU 45 OE1 59 1 Y 0 C GLU 56 ? OE2 ? C GLU 45 OE2 60 1 Y 1 C ASN 66 ? CG ? C ASN 55 CG 61 1 Y 1 C ASN 66 ? OD1 ? C ASN 55 OD1 62 1 Y 1 C ASN 66 ? ND2 ? C ASN 55 ND2 63 1 Y 0 C LYS 70 ? CE ? C LYS 59 CE 64 1 Y 0 C LYS 70 ? NZ ? C LYS 59 NZ 65 1 Y 1 D GLU 34 ? CG ? D GLU 23 CG 66 1 Y 1 D GLU 34 ? CD ? D GLU 23 CD 67 1 Y 1 D GLU 34 ? OE1 ? D GLU 23 OE1 68 1 Y 1 D GLU 34 ? OE2 ? D GLU 23 OE2 69 1 Y 1 D LYS 37 ? CG ? D LYS 26 CG 70 1 Y 1 D LYS 37 ? CD ? D LYS 26 CD 71 1 Y 1 D LYS 37 ? CE ? D LYS 26 CE 72 1 Y 1 D LYS 37 ? NZ ? D LYS 26 NZ 73 1 Y 0 D ARG 38 ? NE ? D ARG 27 NE 74 1 Y 0 D ARG 38 ? CZ ? D ARG 27 CZ 75 1 Y 0 D ARG 38 ? NH1 ? D ARG 27 NH1 76 1 Y 0 D ARG 38 ? NH2 ? D ARG 27 NH2 77 1 Y 0 D GLU 42 ? CD ? D GLU 31 CD 78 1 Y 0 D GLU 42 ? OE1 ? D GLU 31 OE1 79 1 Y 0 D GLU 42 ? OE2 ? D GLU 31 OE2 80 1 Y 0 D ARG 46 ? NE ? D ARG 35 NE 81 1 Y 0 D ARG 46 ? CZ ? D ARG 35 CZ 82 1 Y 0 D ARG 46 ? NH1 ? D ARG 35 NH1 83 1 Y 0 D ARG 46 ? NH2 ? D ARG 35 NH2 84 1 Y 1 D ASN 66 ? CG ? D ASN 55 CG 85 1 Y 1 D ASN 66 ? OD1 ? D ASN 55 OD1 86 1 Y 1 D ASN 66 ? ND2 ? D ASN 55 ND2 87 1 Y 0 D GLU 80 ? CD ? D GLU 69 CD 88 1 Y 0 D GLU 80 ? OE1 ? D GLU 69 OE1 89 1 Y 0 D GLU 80 ? OE2 ? D GLU 69 OE2 90 1 Y 0 D GLU 81 ? CG ? D GLU 70 CG 91 1 Y 0 D GLU 81 ? CD ? D GLU 70 CD 92 1 Y 0 D GLU 81 ? OE1 ? D GLU 70 OE1 93 1 Y 0 D GLU 81 ? OE2 ? D GLU 70 OE2 94 1 Y 0 R DA 1 ? P ? E DA 1 P 95 1 Y 0 R DA 1 ? OP1 ? E DA 1 OP1 96 1 Y 0 R DA 1 ? OP2 ? E DA 1 OP2 97 1 Y 0 S DA 1 ? P ? F DA 1 P 98 1 Y 0 S DA 1 ? OP1 ? F DA 1 OP1 99 1 Y 0 S DA 1 ? OP2 ? F DA 1 OP2 100 1 Y 0 U DC 2 ? P ? H DC 2 P 101 1 Y 0 U DC 2 ? OP1 ? H DC 2 OP1 102 1 Y 0 U DC 2 ? OP2 ? H DC 2 OP2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B HIS 12 ? B HIS 1 2 1 Y 1 C HIS 12 ? C HIS 1 3 1 Y 1 C ILE 83 ? C ILE 72 4 1 Y 1 C ASN 84 ? C ASN 73 5 1 Y 1 C SER 85 ? C SER 74 6 1 Y 1 C SER 86 ? C SER 75 7 1 Y 1 C TRP 87 ? C TRP 76 8 1 Y 1 D HIS 12 ? D HIS 1 9 1 Y 1 D SER 85 ? D SER 74 10 1 Y 1 D SER 86 ? D SER 75 11 1 Y 1 D TRP 87 ? D TRP 76 12 1 Y 1 T DA 1 ? G DA 1 13 1 Y 1 T DA 6 ? G DA 6 14 1 Y 1 U DA 1 ? H DA 1 15 1 Y 1 U DA 6 ? H DA 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 GLU N N N N 158 GLU CA C N S 159 GLU C C N N 160 GLU O O N N 161 GLU CB C N N 162 GLU CG C N N 163 GLU CD C N N 164 GLU OE1 O N N 165 GLU OE2 O N N 166 GLU OXT O N N 167 GLU H H N N 168 GLU H2 H N N 169 GLU HA H N N 170 GLU HB2 H N N 171 GLU HB3 H N N 172 GLU HG2 H N N 173 GLU HG3 H N N 174 GLU HE2 H N N 175 GLU HXT H N N 176 GLY N N N N 177 GLY CA C N N 178 GLY C C N N 179 GLY O O N N 180 GLY OXT O N N 181 GLY H H N N 182 GLY H2 H N N 183 GLY HA2 H N N 184 GLY HA3 H N N 185 GLY HXT H N N 186 HIS N N N N 187 HIS CA C N S 188 HIS C C N N 189 HIS O O N N 190 HIS CB C N N 191 HIS CG C Y N 192 HIS ND1 N Y N 193 HIS CD2 C Y N 194 HIS CE1 C Y N 195 HIS NE2 N Y N 196 HIS OXT O N N 197 HIS H H N N 198 HIS H2 H N N 199 HIS HA H N N 200 HIS HB2 H N N 201 HIS HB3 H N N 202 HIS HD1 H N N 203 HIS HD2 H N N 204 HIS HE1 H N N 205 HIS HE2 H N N 206 HIS HXT H N N 207 HOH O O N N 208 HOH H1 H N N 209 HOH H2 H N N 210 ILE N N N N 211 ILE CA C N S 212 ILE C C N N 213 ILE O O N N 214 ILE CB C N S 215 ILE CG1 C N N 216 ILE CG2 C N N 217 ILE CD1 C N N 218 ILE OXT O N N 219 ILE H H N N 220 ILE H2 H N N 221 ILE HA H N N 222 ILE HB H N N 223 ILE HG12 H N N 224 ILE HG13 H N N 225 ILE HG21 H N N 226 ILE HG22 H N N 227 ILE HG23 H N N 228 ILE HD11 H N N 229 ILE HD12 H N N 230 ILE HD13 H N N 231 ILE HXT H N N 232 LEU N N N N 233 LEU CA C N S 234 LEU C C N N 235 LEU O O N N 236 LEU CB C N N 237 LEU CG C N N 238 LEU CD1 C N N 239 LEU CD2 C N N 240 LEU OXT O N N 241 LEU H H N N 242 LEU H2 H N N 243 LEU HA H N N 244 LEU HB2 H N N 245 LEU HB3 H N N 246 LEU HG H N N 247 LEU HD11 H N N 248 LEU HD12 H N N 249 LEU HD13 H N N 250 LEU HD21 H N N 251 LEU HD22 H N N 252 LEU HD23 H N N 253 LEU HXT H N N 254 LYS N N N N 255 LYS CA C N S 256 LYS C C N N 257 LYS O O N N 258 LYS CB C N N 259 LYS CG C N N 260 LYS CD C N N 261 LYS CE C N N 262 LYS NZ N N N 263 LYS OXT O N N 264 LYS H H N N 265 LYS H2 H N N 266 LYS HA H N N 267 LYS HB2 H N N 268 LYS HB3 H N N 269 LYS HG2 H N N 270 LYS HG3 H N N 271 LYS HD2 H N N 272 LYS HD3 H N N 273 LYS HE2 H N N 274 LYS HE3 H N N 275 LYS HZ1 H N N 276 LYS HZ2 H N N 277 LYS HZ3 H N N 278 LYS HXT H N N 279 MET N N N N 280 MET CA C N S 281 MET C C N N 282 MET O O N N 283 MET CB C N N 284 MET CG C N N 285 MET SD S N N 286 MET CE C N N 287 MET OXT O N N 288 MET H H N N 289 MET H2 H N N 290 MET HA H N N 291 MET HB2 H N N 292 MET HB3 H N N 293 MET HG2 H N N 294 MET HG3 H N N 295 MET HE1 H N N 296 MET HE2 H N N 297 MET HE3 H N N 298 MET HXT H N N 299 PHE N N N N 300 PHE CA C N S 301 PHE C C N N 302 PHE O O N N 303 PHE CB C N N 304 PHE CG C Y N 305 PHE CD1 C Y N 306 PHE CD2 C Y N 307 PHE CE1 C Y N 308 PHE CE2 C Y N 309 PHE CZ C Y N 310 PHE OXT O N N 311 PHE H H N N 312 PHE H2 H N N 313 PHE HA H N N 314 PHE HB2 H N N 315 PHE HB3 H N N 316 PHE HD1 H N N 317 PHE HD2 H N N 318 PHE HE1 H N N 319 PHE HE2 H N N 320 PHE HZ H N N 321 PHE HXT H N N 322 PRO N N N N 323 PRO CA C N S 324 PRO C C N N 325 PRO O O N N 326 PRO CB C N N 327 PRO CG C N N 328 PRO CD C N N 329 PRO OXT O N N 330 PRO H H N N 331 PRO HA H N N 332 PRO HB2 H N N 333 PRO HB3 H N N 334 PRO HG2 H N N 335 PRO HG3 H N N 336 PRO HD2 H N N 337 PRO HD3 H N N 338 PRO HXT H N N 339 SER N N N N 340 SER CA C N S 341 SER C C N N 342 SER O O N N 343 SER CB C N N 344 SER OG O N N 345 SER OXT O N N 346 SER H H N N 347 SER H2 H N N 348 SER HA H N N 349 SER HB2 H N N 350 SER HB3 H N N 351 SER HG H N N 352 SER HXT H N N 353 THR N N N N 354 THR CA C N S 355 THR C C N N 356 THR O O N N 357 THR CB C N R 358 THR OG1 O N N 359 THR CG2 C N N 360 THR OXT O N N 361 THR H H N N 362 THR H2 H N N 363 THR HA H N N 364 THR HB H N N 365 THR HG1 H N N 366 THR HG21 H N N 367 THR HG22 H N N 368 THR HG23 H N N 369 THR HXT H N N 370 TRP N N N N 371 TRP CA C N S 372 TRP C C N N 373 TRP O O N N 374 TRP CB C N N 375 TRP CG C Y N 376 TRP CD1 C Y N 377 TRP CD2 C Y N 378 TRP NE1 N Y N 379 TRP CE2 C Y N 380 TRP CE3 C Y N 381 TRP CZ2 C Y N 382 TRP CZ3 C Y N 383 TRP CH2 C Y N 384 TRP OXT O N N 385 TRP H H N N 386 TRP H2 H N N 387 TRP HA H N N 388 TRP HB2 H N N 389 TRP HB3 H N N 390 TRP HD1 H N N 391 TRP HE1 H N N 392 TRP HE3 H N N 393 TRP HZ2 H N N 394 TRP HZ3 H N N 395 TRP HH2 H N N 396 TRP HXT H N N 397 VAL N N N N 398 VAL CA C N S 399 VAL C C N N 400 VAL O O N N 401 VAL CB C N N 402 VAL CG1 C N N 403 VAL CG2 C N N 404 VAL OXT O N N 405 VAL H H N N 406 VAL H2 H N N 407 VAL HA H N N 408 VAL HB H N N 409 VAL HG11 H N N 410 VAL HG12 H N N 411 VAL HG13 H N N 412 VAL HG21 H N N 413 VAL HG22 H N N 414 VAL HG23 H N N 415 VAL HXT H N N 416 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZTG _pdbx_initial_refinement_model.details ? #