data_3VQV # _entry.id 3VQV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VQV pdb_00003vqv 10.2210/pdb3vqv/pdb RCSB RCSB095387 ? ? WWPDB D_1000095387 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2013-01-02 _pdbx_database_PDB_obs_spr.pdb_id 3VQV _pdbx_database_PDB_obs_spr.replace_pdb_id 2ZCD _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2e3c . unspecified PDB 2zcd . unspecified PDB 2zce . unspecified PDB 2zin . unspecified PDB 2zio . unspecified PDB 3vqw . unspecified PDB 3vqx . unspecified PDB 3vqy . unspecified TargetTrack RSGI-trt001000322.1 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VQV _pdbx_database_status.recvd_initial_deposition_date 2012-04-01 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yanagisawa, T.' 1 'Sumida, T.' 2 'Ishii, R.' 3 'Yokoyama, S.' 4 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;A novel crystal form of pyrrolysyl-tRNA synthetase reveals the pre- and post-aminoacyl-tRNA synthesis conformational states of the adenylate and aminoacyl moieties and an asparagine residue in the catalytic site ; 'Acta Crystallogr.,Sect.D' 69 5 15 2013 ABCRE6 DK 0907-4449 0766 ? 23275158 10.1107/S0907444912039881 1 'Crystallographic studies on multiple conformational states of active-site loops in pyrrolysyl-tRNA synthetase' J.Mol.Biol. 378 634 652 2008 JMOBAK UK 0022-2836 0070 ? 18387634 10.1016/j.jmb.2008.02.045 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yanagisawa, T.' 1 ? primary 'Sumida, T.' 2 ? primary 'Ishii, R.' 3 ? primary 'Yokoyama, S.' 4 ? 1 'Yanagisawa, T.' 5 ? 1 'Ishii, R.' 6 ? 1 'Fukunaga, R.' 7 ? 1 'Kobayashi, T.' 8 ? 1 'Sakamoto, K.' 9 ? 1 'Yokoyama, S.' 10 ? # _cell.entry_id 3VQV _cell.length_a 104.876 _cell.length_b 104.876 _cell.length_c 70.433 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VQV _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Pyrrolysine--tRNA ligase' 33344.164 1 6.1.1.26 E444G ? ? 2 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 506.196 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 water nat water 18.015 246 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pyrrolysyl-tRNA synthetase, PylRS' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYL GKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIF EIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLELSSAVVG PIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSGSYYNGISTNL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMASAPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYL GKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIF EIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLELSSAVVG PIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSGSYYNGISTNL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier RSGI-trt001000322.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ALA n 1 23 SER n 1 24 ALA n 1 25 PRO n 1 26 ALA n 1 27 LEU n 1 28 THR n 1 29 LYS n 1 30 SER n 1 31 GLN n 1 32 THR n 1 33 ASP n 1 34 ARG n 1 35 LEU n 1 36 GLU n 1 37 VAL n 1 38 LEU n 1 39 LEU n 1 40 ASN n 1 41 PRO n 1 42 LYS n 1 43 ASP n 1 44 GLU n 1 45 ILE n 1 46 SER n 1 47 LEU n 1 48 ASN n 1 49 SER n 1 50 GLY n 1 51 LYS n 1 52 PRO n 1 53 PHE n 1 54 ARG n 1 55 GLU n 1 56 LEU n 1 57 GLU n 1 58 SER n 1 59 GLU n 1 60 LEU n 1 61 LEU n 1 62 SER n 1 63 ARG n 1 64 ARG n 1 65 LYS n 1 66 LYS n 1 67 ASP n 1 68 LEU n 1 69 GLN n 1 70 GLN n 1 71 ILE n 1 72 TYR n 1 73 ALA n 1 74 GLU n 1 75 GLU n 1 76 ARG n 1 77 GLU n 1 78 ASN n 1 79 TYR n 1 80 LEU n 1 81 GLY n 1 82 LYS n 1 83 LEU n 1 84 GLU n 1 85 ARG n 1 86 GLU n 1 87 ILE n 1 88 THR n 1 89 ARG n 1 90 PHE n 1 91 PHE n 1 92 VAL n 1 93 ASP n 1 94 ARG n 1 95 GLY n 1 96 PHE n 1 97 LEU n 1 98 GLU n 1 99 ILE n 1 100 LYS n 1 101 SER n 1 102 PRO n 1 103 ILE n 1 104 LEU n 1 105 ILE n 1 106 PRO n 1 107 LEU n 1 108 GLU n 1 109 TYR n 1 110 ILE n 1 111 GLU n 1 112 ARG n 1 113 MET n 1 114 GLY n 1 115 ILE n 1 116 ASP n 1 117 ASN n 1 118 ASP n 1 119 THR n 1 120 GLU n 1 121 LEU n 1 122 SER n 1 123 LYS n 1 124 GLN n 1 125 ILE n 1 126 PHE n 1 127 ARG n 1 128 VAL n 1 129 ASP n 1 130 LYS n 1 131 ASN n 1 132 PHE n 1 133 CYS n 1 134 LEU n 1 135 ARG n 1 136 PRO n 1 137 MET n 1 138 LEU n 1 139 ALA n 1 140 PRO n 1 141 ASN n 1 142 LEU n 1 143 TYR n 1 144 ASN n 1 145 TYR n 1 146 LEU n 1 147 ARG n 1 148 LYS n 1 149 LEU n 1 150 ASP n 1 151 ARG n 1 152 ALA n 1 153 LEU n 1 154 PRO n 1 155 ASP n 1 156 PRO n 1 157 ILE n 1 158 LYS n 1 159 ILE n 1 160 PHE n 1 161 GLU n 1 162 ILE n 1 163 GLY n 1 164 PRO n 1 165 CYS n 1 166 TYR n 1 167 ARG n 1 168 LYS n 1 169 GLU n 1 170 SER n 1 171 ASP n 1 172 GLY n 1 173 LYS n 1 174 GLU n 1 175 HIS n 1 176 LEU n 1 177 GLU n 1 178 GLU n 1 179 PHE n 1 180 THR n 1 181 MET n 1 182 LEU n 1 183 ASN n 1 184 PHE n 1 185 CYS n 1 186 GLN n 1 187 MET n 1 188 GLY n 1 189 SER n 1 190 GLY n 1 191 CYS n 1 192 THR n 1 193 ARG n 1 194 GLU n 1 195 ASN n 1 196 LEU n 1 197 GLU n 1 198 SER n 1 199 ILE n 1 200 ILE n 1 201 THR n 1 202 ASP n 1 203 PHE n 1 204 LEU n 1 205 ASN n 1 206 HIS n 1 207 LEU n 1 208 GLY n 1 209 ILE n 1 210 ASP n 1 211 PHE n 1 212 LYS n 1 213 ILE n 1 214 VAL n 1 215 GLY n 1 216 ASP n 1 217 SER n 1 218 CYS n 1 219 MET n 1 220 VAL n 1 221 TYR n 1 222 GLY n 1 223 ASP n 1 224 THR n 1 225 LEU n 1 226 ASP n 1 227 VAL n 1 228 MET n 1 229 HIS n 1 230 GLY n 1 231 ASP n 1 232 LEU n 1 233 GLU n 1 234 LEU n 1 235 SER n 1 236 SER n 1 237 ALA n 1 238 VAL n 1 239 VAL n 1 240 GLY n 1 241 PRO n 1 242 ILE n 1 243 PRO n 1 244 LEU n 1 245 ASP n 1 246 ARG n 1 247 GLU n 1 248 TRP n 1 249 GLY n 1 250 ILE n 1 251 ASP n 1 252 LYS n 1 253 PRO n 1 254 TRP n 1 255 ILE n 1 256 GLY n 1 257 ALA n 1 258 GLY n 1 259 PHE n 1 260 GLY n 1 261 LEU n 1 262 GLU n 1 263 ARG n 1 264 LEU n 1 265 LEU n 1 266 LYS n 1 267 VAL n 1 268 LYS n 1 269 HIS n 1 270 ASP n 1 271 PHE n 1 272 LYS n 1 273 ASN n 1 274 ILE n 1 275 LYS n 1 276 ARG n 1 277 ALA n 1 278 ALA n 1 279 ARG n 1 280 SER n 1 281 GLY n 1 282 SER n 1 283 TYR n 1 284 TYR n 1 285 ASN n 1 286 GLY n 1 287 ILE n 1 288 SER n 1 289 THR n 1 290 ASN n 1 291 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pylS _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain JCM9314 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanosarcina mazei' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2209 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) codon plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28c _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3VQV _struct_ref.pdbx_db_accession 3VQV _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3VQV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 291 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3VQV _struct_ref_seq.db_align_beg 164 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 454 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 164 _struct_ref_seq.pdbx_auth_seq_align_end 454 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ANP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ? 'C10 H17 N6 O12 P3' 506.196 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3VQV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.35 _exptl_crystal.density_percent_sol 63.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_details 'Na/Cacodylate, MgCl2, PEG4000, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2005-02-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 3VQV _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.9 _reflns.number_obs 34806 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.089 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.45 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 4.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3VQV _refine.ls_number_reflns_obs 33041 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.07 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.18820 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18657 _refine.ls_R_factor_R_free 0.21910 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1750 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.949 _refine.B_iso_mean 38.945 _refine.aniso_B[1][1] -0.70 _refine.aniso_B[2][2] -0.70 _refine.aniso_B[3][3] 1.05 _refine.aniso_B[1][2] -0.35 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 3VQW _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.115 _refine.pdbx_overall_ESU_R_Free 0.114 _refine.overall_SU_ML 0.095 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2095 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 246 _refine_hist.number_atoms_total 2374 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 42.07 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.017 0.022 ? 2170 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.706 2.010 ? 2924 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.095 5.000 ? 255 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 33.637 23.925 ? 107 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 17.916 15.000 ? 406 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20.486 15.000 ? 19 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.120 0.200 ? 316 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.007 0.020 ? 1621 ? 'X-RAY DIFFRACTION' r_nbd_refined 0.225 0.200 ? 945 ? 'X-RAY DIFFRACTION' r_nbtor_refined 0.315 0.200 ? 1468 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 0.225 0.200 ? 184 ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 0.228 0.200 ? 44 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 0.256 0.200 ? 17 ? 'X-RAY DIFFRACTION' r_mcbond_it 1.186 1.500 ? 1322 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.080 2.000 ? 2074 ? 'X-RAY DIFFRACTION' r_scbond_it 2.925 3.000 ? 953 ? 'X-RAY DIFFRACTION' r_scangle_it 4.783 4.500 ? 850 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.number_reflns_R_work 2449 _refine_ls_shell.R_factor_R_work 0.307 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.358 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 124 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3VQV _struct.title 'Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with AMPPNP (re-refined)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VQV _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, aminoacyl-tRNA synthetase, pyrrolysyl-tRNA synthetase, AMPPNP, LIGASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 28 ? LEU A 39 ? THR A 191 LEU A 202 1 ? 12 HELX_P HELX_P2 2 PRO A 52 ? GLU A 74 ? PRO A 215 GLU A 237 1 ? 23 HELX_P HELX_P3 3 ASN A 78 ? ARG A 94 ? ASN A 241 ARG A 257 1 ? 17 HELX_P HELX_P4 4 LEU A 107 ? MET A 113 ? LEU A 270 MET A 276 1 ? 7 HELX_P HELX_P5 5 GLU A 120 ? ILE A 125 ? GLU A 283 ILE A 288 5 ? 6 HELX_P HELX_P6 6 LEU A 138 ? ARG A 151 ? LEU A 301 ARG A 314 1 ? 14 HELX_P HELX_P7 7 THR A 192 ? GLY A 208 ? THR A 355 GLY A 371 1 ? 17 HELX_P HELX_P8 8 ILE A 242 ? GLY A 249 ? ILE A 405 GLY A 412 5 ? 8 HELX_P HELX_P9 9 LEU A 261 ? ASP A 270 ? LEU A 424 ASP A 433 1 ? 10 HELX_P HELX_P10 10 ASN A 273 ? ALA A 278 ? ASN A 436 ALA A 441 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 233 OE2 ? ? ? 1_555 D MG . MG ? ? A GLU 396 A MG 503 1_555 ? ? ? ? ? ? ? 2.429 ? ? metalc2 metalc ? ? A GLU 233 OE1 ? ? ? 1_555 D MG . MG ? ? A GLU 396 A MG 503 1_555 ? ? ? ? ? ? ? 2.773 ? ? metalc3 metalc ? ? A SER 236 OG ? ? ? 1_555 D MG . MG ? ? A SER 399 A MG 503 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc4 metalc ? ? B ANP . O2B ? ? ? 1_555 C MG . MG ? ? A ANP 501 A MG 502 1_555 ? ? ? ? ? ? ? 2.064 ? ? metalc5 metalc ? ? B ANP . O2G ? ? ? 1_555 C MG . MG ? ? A ANP 501 A MG 502 1_555 ? ? ? ? ? ? ? 2.108 ? ? metalc6 metalc ? ? B ANP . O1B ? ? ? 1_555 D MG . MG ? ? A ANP 501 A MG 503 1_555 ? ? ? ? ? ? ? 2.308 ? ? metalc7 metalc ? ? B ANP . O1A ? ? ? 1_555 D MG . MG ? ? A ANP 501 A MG 503 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 502 A HOH 752 1_555 ? ? ? ? ? ? ? 2.104 ? ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 502 A HOH 768 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 502 A HOH 772 1_555 ? ? ? ? ? ? ? 2.020 ? ? metalc11 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 502 A HOH 779 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc12 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 503 A HOH 813 1_555 ? ? ? ? ? ? ? 2.539 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 155 A . ? ASP 318 A PRO 156 A ? PRO 319 A 1 -1.22 2 GLY 240 A . ? GLY 403 A PRO 241 A ? PRO 404 A 1 1.56 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 97 ? ILE A 99 ? LEU A 260 ILE A 262 A 2 ILE A 157 ? TYR A 166 ? ILE A 320 TYR A 329 A 3 GLU A 178 ? MET A 187 ? GLU A 341 MET A 350 A 4 TRP A 254 ? GLY A 260 ? TRP A 417 GLY A 423 A 5 LEU A 232 ? VAL A 239 ? LEU A 395 VAL A 402 A 6 THR A 224 ? HIS A 229 ? THR A 387 HIS A 392 A 7 LYS A 212 ? VAL A 214 ? LYS A 375 VAL A 377 B 1 LEU A 104 ? PRO A 106 ? LEU A 267 PRO A 269 B 2 PHE A 132 ? LEU A 134 ? PHE A 295 LEU A 297 B 3 ARG A 127 ? VAL A 128 ? ARG A 290 VAL A 291 C 1 TYR A 283 ? TYR A 284 ? TYR A 446 TYR A 447 C 2 ILE A 287 ? SER A 288 ? ILE A 450 SER A 451 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 97 ? N LEU A 260 O LYS A 158 ? O LYS A 321 A 2 3 N CYS A 165 ? N CYS A 328 O PHE A 179 ? O PHE A 342 A 3 4 N LEU A 182 ? N LEU A 345 O PHE A 259 ? O PHE A 422 A 4 5 O GLY A 256 ? O GLY A 419 N VAL A 238 ? N VAL A 401 A 5 6 O LEU A 232 ? O LEU A 395 N HIS A 229 ? N HIS A 392 A 6 7 O MET A 228 ? O MET A 391 N LYS A 212 ? N LYS A 375 B 1 2 N ILE A 105 ? N ILE A 268 O CYS A 133 ? O CYS A 296 B 2 3 O PHE A 132 ? O PHE A 295 N VAL A 128 ? N VAL A 291 C 1 2 N TYR A 284 ? N TYR A 447 O ILE A 287 ? O ILE A 450 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ANP 501 ? 27 'BINDING SITE FOR RESIDUE ANP A 501' AC2 Software A MG 502 ? 5 'BINDING SITE FOR RESIDUE MG A 502' AC3 Software A MG 503 ? 4 'BINDING SITE FOR RESIDUE MG A 503' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 27 ARG A 167 ? ARG A 330 . ? 1_555 ? 2 AC1 27 GLU A 169 ? GLU A 332 . ? 1_555 ? 3 AC1 27 HIS A 175 ? HIS A 338 . ? 1_555 ? 4 AC1 27 LEU A 176 ? LEU A 339 . ? 1_555 ? 5 AC1 27 PHE A 179 ? PHE A 342 . ? 1_555 ? 6 AC1 27 MET A 181 ? MET A 344 . ? 1_555 ? 7 AC1 27 GLU A 233 ? GLU A 396 . ? 1_555 ? 8 AC1 27 LEU A 234 ? LEU A 397 . ? 1_555 ? 9 AC1 27 SER A 235 ? SER A 398 . ? 1_555 ? 10 AC1 27 SER A 236 ? SER A 399 . ? 1_555 ? 11 AC1 27 GLY A 258 ? GLY A 421 . ? 1_555 ? 12 AC1 27 GLY A 260 ? GLY A 423 . ? 1_555 ? 13 AC1 27 ARG A 263 ? ARG A 426 . ? 1_555 ? 14 AC1 27 MG C . ? MG A 502 . ? 1_555 ? 15 AC1 27 MG D . ? MG A 503 . ? 1_555 ? 16 AC1 27 HOH E . ? HOH A 601 . ? 1_555 ? 17 AC1 27 HOH E . ? HOH A 602 . ? 1_555 ? 18 AC1 27 HOH E . ? HOH A 657 . ? 1_555 ? 19 AC1 27 HOH E . ? HOH A 678 . ? 1_555 ? 20 AC1 27 HOH E . ? HOH A 752 . ? 1_555 ? 21 AC1 27 HOH E . ? HOH A 768 . ? 1_555 ? 22 AC1 27 HOH E . ? HOH A 772 . ? 1_555 ? 23 AC1 27 HOH E . ? HOH A 779 . ? 1_555 ? 24 AC1 27 HOH E . ? HOH A 792 . ? 1_555 ? 25 AC1 27 HOH E . ? HOH A 809 . ? 1_555 ? 26 AC1 27 HOH E . ? HOH A 813 . ? 1_555 ? 27 AC1 27 HOH E . ? HOH A 822 . ? 1_555 ? 28 AC2 5 ANP B . ? ANP A 501 . ? 1_555 ? 29 AC2 5 HOH E . ? HOH A 752 . ? 1_555 ? 30 AC2 5 HOH E . ? HOH A 768 . ? 1_555 ? 31 AC2 5 HOH E . ? HOH A 772 . ? 1_555 ? 32 AC2 5 HOH E . ? HOH A 779 . ? 1_555 ? 33 AC3 4 GLU A 233 ? GLU A 396 . ? 1_555 ? 34 AC3 4 SER A 236 ? SER A 399 . ? 1_555 ? 35 AC3 4 ANP B . ? ANP A 501 . ? 1_555 ? 36 AC3 4 HOH E . ? HOH A 813 . ? 1_555 ? # _database_PDB_matrix.entry_id 3VQV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3VQV _atom_sites.fract_transf_matrix[1][1] 0.009535 _atom_sites.fract_transf_matrix[1][2] 0.005505 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011010 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014198 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 164 ? ? ? A . n A 1 2 GLY 2 165 ? ? ? A . n A 1 3 SER 3 166 ? ? ? A . n A 1 4 SER 4 167 ? ? ? A . n A 1 5 HIS 5 168 ? ? ? A . n A 1 6 HIS 6 169 ? ? ? A . n A 1 7 HIS 7 170 ? ? ? A . n A 1 8 HIS 8 171 ? ? ? A . n A 1 9 HIS 9 172 ? ? ? A . n A 1 10 HIS 10 173 ? ? ? A . n A 1 11 SER 11 174 ? ? ? A . n A 1 12 SER 12 175 ? ? ? A . n A 1 13 GLY 13 176 ? ? ? A . n A 1 14 LEU 14 177 ? ? ? A . n A 1 15 VAL 15 178 ? ? ? A . n A 1 16 PRO 16 179 ? ? ? A . n A 1 17 ARG 17 180 ? ? ? A . n A 1 18 GLY 18 181 ? ? ? A . n A 1 19 SER 19 182 ? ? ? A . n A 1 20 HIS 20 183 ? ? ? A . n A 1 21 MET 21 184 ? ? ? A . n A 1 22 ALA 22 185 ? ? ? A . n A 1 23 SER 23 186 ? ? ? A . n A 1 24 ALA 24 187 ? ? ? A . n A 1 25 PRO 25 188 188 PRO PRO A . n A 1 26 ALA 26 189 189 ALA ALA A . n A 1 27 LEU 27 190 190 LEU LEU A . n A 1 28 THR 28 191 191 THR THR A . n A 1 29 LYS 29 192 192 LYS LYS A . n A 1 30 SER 30 193 193 SER SER A . n A 1 31 GLN 31 194 194 GLN GLN A . n A 1 32 THR 32 195 195 THR THR A . n A 1 33 ASP 33 196 196 ASP ASP A . n A 1 34 ARG 34 197 197 ARG ARG A . n A 1 35 LEU 35 198 198 LEU LEU A . n A 1 36 GLU 36 199 199 GLU GLU A . n A 1 37 VAL 37 200 200 VAL VAL A . n A 1 38 LEU 38 201 201 LEU LEU A . n A 1 39 LEU 39 202 202 LEU LEU A . n A 1 40 ASN 40 203 203 ASN ASN A . n A 1 41 PRO 41 204 204 PRO PRO A . n A 1 42 LYS 42 205 205 LYS LYS A . n A 1 43 ASP 43 206 206 ASP ASP A . n A 1 44 GLU 44 207 207 GLU GLU A . n A 1 45 ILE 45 208 ? ? ? A . n A 1 46 SER 46 209 ? ? ? A . n A 1 47 LEU 47 210 ? ? ? A . n A 1 48 ASN 48 211 ? ? ? A . n A 1 49 SER 49 212 212 SER SER A . n A 1 50 GLY 50 213 213 GLY GLY A . n A 1 51 LYS 51 214 214 LYS LYS A . n A 1 52 PRO 52 215 215 PRO PRO A . n A 1 53 PHE 53 216 216 PHE PHE A . n A 1 54 ARG 54 217 217 ARG ARG A . n A 1 55 GLU 55 218 218 GLU GLU A . n A 1 56 LEU 56 219 219 LEU LEU A . n A 1 57 GLU 57 220 220 GLU GLU A . n A 1 58 SER 58 221 221 SER SER A . n A 1 59 GLU 59 222 222 GLU GLU A . n A 1 60 LEU 60 223 223 LEU LEU A . n A 1 61 LEU 61 224 224 LEU LEU A . n A 1 62 SER 62 225 225 SER SER A . n A 1 63 ARG 63 226 226 ARG ARG A . n A 1 64 ARG 64 227 227 ARG ARG A . n A 1 65 LYS 65 228 228 LYS LYS A . n A 1 66 LYS 66 229 229 LYS LYS A . n A 1 67 ASP 67 230 230 ASP ASP A . n A 1 68 LEU 68 231 231 LEU LEU A . n A 1 69 GLN 69 232 232 GLN GLN A . n A 1 70 GLN 70 233 233 GLN GLN A . n A 1 71 ILE 71 234 234 ILE ILE A . n A 1 72 TYR 72 235 235 TYR TYR A . n A 1 73 ALA 73 236 236 ALA ALA A . n A 1 74 GLU 74 237 237 GLU GLU A . n A 1 75 GLU 75 238 238 GLU GLU A . n A 1 76 ARG 76 239 239 ARG ARG A . n A 1 77 GLU 77 240 240 GLU GLU A . n A 1 78 ASN 78 241 241 ASN ASN A . n A 1 79 TYR 79 242 242 TYR TYR A . n A 1 80 LEU 80 243 243 LEU LEU A . n A 1 81 GLY 81 244 244 GLY GLY A . n A 1 82 LYS 82 245 245 LYS LYS A . n A 1 83 LEU 83 246 246 LEU LEU A . n A 1 84 GLU 84 247 247 GLU GLU A . n A 1 85 ARG 85 248 248 ARG ARG A . n A 1 86 GLU 86 249 249 GLU GLU A . n A 1 87 ILE 87 250 250 ILE ILE A . n A 1 88 THR 88 251 251 THR THR A . n A 1 89 ARG 89 252 252 ARG ARG A . n A 1 90 PHE 90 253 253 PHE PHE A . n A 1 91 PHE 91 254 254 PHE PHE A . n A 1 92 VAL 92 255 255 VAL VAL A . n A 1 93 ASP 93 256 256 ASP ASP A . n A 1 94 ARG 94 257 257 ARG ARG A . n A 1 95 GLY 95 258 258 GLY GLY A . n A 1 96 PHE 96 259 259 PHE PHE A . n A 1 97 LEU 97 260 260 LEU LEU A . n A 1 98 GLU 98 261 261 GLU GLU A . n A 1 99 ILE 99 262 262 ILE ILE A . n A 1 100 LYS 100 263 263 LYS LYS A . n A 1 101 SER 101 264 264 SER SER A . n A 1 102 PRO 102 265 265 PRO PRO A . n A 1 103 ILE 103 266 266 ILE ILE A . n A 1 104 LEU 104 267 267 LEU LEU A . n A 1 105 ILE 105 268 268 ILE ILE A . n A 1 106 PRO 106 269 269 PRO PRO A . n A 1 107 LEU 107 270 270 LEU LEU A . n A 1 108 GLU 108 271 271 GLU GLU A . n A 1 109 TYR 109 272 272 TYR TYR A . n A 1 110 ILE 110 273 273 ILE ILE A . n A 1 111 GLU 111 274 274 GLU GLU A . n A 1 112 ARG 112 275 275 ARG ARG A . n A 1 113 MET 113 276 276 MET MET A . n A 1 114 GLY 114 277 277 GLY GLY A . n A 1 115 ILE 115 278 278 ILE ILE A . n A 1 116 ASP 116 279 279 ASP ASP A . n A 1 117 ASN 117 280 280 ASN ASN A . n A 1 118 ASP 118 281 281 ASP ASP A . n A 1 119 THR 119 282 282 THR THR A . n A 1 120 GLU 120 283 283 GLU GLU A . n A 1 121 LEU 121 284 284 LEU LEU A . n A 1 122 SER 122 285 285 SER SER A . n A 1 123 LYS 123 286 286 LYS LYS A . n A 1 124 GLN 124 287 287 GLN GLN A . n A 1 125 ILE 125 288 288 ILE ILE A . n A 1 126 PHE 126 289 289 PHE PHE A . n A 1 127 ARG 127 290 290 ARG ARG A . n A 1 128 VAL 128 291 291 VAL VAL A . n A 1 129 ASP 129 292 292 ASP ASP A . n A 1 130 LYS 130 293 293 LYS LYS A . n A 1 131 ASN 131 294 294 ASN ASN A . n A 1 132 PHE 132 295 295 PHE PHE A . n A 1 133 CYS 133 296 296 CYS CYS A . n A 1 134 LEU 134 297 297 LEU LEU A . n A 1 135 ARG 135 298 298 ARG ARG A . n A 1 136 PRO 136 299 299 PRO PRO A . n A 1 137 MET 137 300 300 MET MET A . n A 1 138 LEU 138 301 301 LEU LEU A . n A 1 139 ALA 139 302 302 ALA ALA A . n A 1 140 PRO 140 303 303 PRO PRO A . n A 1 141 ASN 141 304 304 ASN ASN A . n A 1 142 LEU 142 305 305 LEU LEU A . n A 1 143 TYR 143 306 306 TYR TYR A . n A 1 144 ASN 144 307 307 ASN ASN A . n A 1 145 TYR 145 308 308 TYR TYR A . n A 1 146 LEU 146 309 309 LEU LEU A . n A 1 147 ARG 147 310 310 ARG ARG A . n A 1 148 LYS 148 311 311 LYS LYS A . n A 1 149 LEU 149 312 312 LEU LEU A . n A 1 150 ASP 150 313 313 ASP ASP A . n A 1 151 ARG 151 314 314 ARG ARG A . n A 1 152 ALA 152 315 315 ALA ALA A . n A 1 153 LEU 153 316 316 LEU LEU A . n A 1 154 PRO 154 317 317 PRO PRO A . n A 1 155 ASP 155 318 318 ASP ASP A . n A 1 156 PRO 156 319 319 PRO PRO A . n A 1 157 ILE 157 320 320 ILE ILE A . n A 1 158 LYS 158 321 321 LYS LYS A . n A 1 159 ILE 159 322 322 ILE ILE A . n A 1 160 PHE 160 323 323 PHE PHE A . n A 1 161 GLU 161 324 324 GLU GLU A . n A 1 162 ILE 162 325 325 ILE ILE A . n A 1 163 GLY 163 326 326 GLY GLY A . n A 1 164 PRO 164 327 327 PRO PRO A . n A 1 165 CYS 165 328 328 CYS CYS A . n A 1 166 TYR 166 329 329 TYR TYR A . n A 1 167 ARG 167 330 330 ARG ARG A . n A 1 168 LYS 168 331 331 LYS LYS A . n A 1 169 GLU 169 332 332 GLU GLU A . n A 1 170 SER 170 333 333 SER SER A . n A 1 171 ASP 171 334 334 ASP ASP A . n A 1 172 GLY 172 335 335 GLY GLY A . n A 1 173 LYS 173 336 336 LYS LYS A . n A 1 174 GLU 174 337 337 GLU GLU A . n A 1 175 HIS 175 338 338 HIS HIS A . n A 1 176 LEU 176 339 339 LEU LEU A . n A 1 177 GLU 177 340 340 GLU GLU A . n A 1 178 GLU 178 341 341 GLU GLU A . n A 1 179 PHE 179 342 342 PHE PHE A . n A 1 180 THR 180 343 343 THR THR A . n A 1 181 MET 181 344 344 MET MET A . n A 1 182 LEU 182 345 345 LEU LEU A . n A 1 183 ASN 183 346 346 ASN ASN A . n A 1 184 PHE 184 347 347 PHE PHE A . n A 1 185 CYS 185 348 348 CYS CYS A . n A 1 186 GLN 186 349 349 GLN GLN A . n A 1 187 MET 187 350 350 MET MET A . n A 1 188 GLY 188 351 351 GLY GLY A . n A 1 189 SER 189 352 352 SER SER A . n A 1 190 GLY 190 353 353 GLY GLY A . n A 1 191 CYS 191 354 354 CYS CYS A . n A 1 192 THR 192 355 355 THR THR A . n A 1 193 ARG 193 356 356 ARG ARG A . n A 1 194 GLU 194 357 357 GLU GLU A . n A 1 195 ASN 195 358 358 ASN ASN A . n A 1 196 LEU 196 359 359 LEU LEU A . n A 1 197 GLU 197 360 360 GLU GLU A . n A 1 198 SER 198 361 361 SER SER A . n A 1 199 ILE 199 362 362 ILE ILE A . n A 1 200 ILE 200 363 363 ILE ILE A . n A 1 201 THR 201 364 364 THR THR A . n A 1 202 ASP 202 365 365 ASP ASP A . n A 1 203 PHE 203 366 366 PHE PHE A . n A 1 204 LEU 204 367 367 LEU LEU A . n A 1 205 ASN 205 368 368 ASN ASN A . n A 1 206 HIS 206 369 369 HIS HIS A . n A 1 207 LEU 207 370 370 LEU LEU A . n A 1 208 GLY 208 371 371 GLY GLY A . n A 1 209 ILE 209 372 372 ILE ILE A . n A 1 210 ASP 210 373 373 ASP ASP A . n A 1 211 PHE 211 374 374 PHE PHE A . n A 1 212 LYS 212 375 375 LYS LYS A . n A 1 213 ILE 213 376 376 ILE ILE A . n A 1 214 VAL 214 377 377 VAL VAL A . n A 1 215 GLY 215 378 378 GLY GLY A . n A 1 216 ASP 216 379 379 ASP ASP A . n A 1 217 SER 217 380 ? ? ? A . n A 1 218 CYS 218 381 ? ? ? A . n A 1 219 MET 219 382 ? ? ? A . n A 1 220 VAL 220 383 ? ? ? A . n A 1 221 TYR 221 384 ? ? ? A . n A 1 222 GLY 222 385 385 GLY GLY A . n A 1 223 ASP 223 386 386 ASP ASP A . n A 1 224 THR 224 387 387 THR THR A . n A 1 225 LEU 225 388 388 LEU LEU A . n A 1 226 ASP 226 389 389 ASP ASP A . n A 1 227 VAL 227 390 390 VAL VAL A . n A 1 228 MET 228 391 391 MET MET A . n A 1 229 HIS 229 392 392 HIS HIS A . n A 1 230 GLY 230 393 393 GLY GLY A . n A 1 231 ASP 231 394 394 ASP ASP A . n A 1 232 LEU 232 395 395 LEU LEU A . n A 1 233 GLU 233 396 396 GLU GLU A . n A 1 234 LEU 234 397 397 LEU LEU A . n A 1 235 SER 235 398 398 SER SER A . n A 1 236 SER 236 399 399 SER SER A . n A 1 237 ALA 237 400 400 ALA ALA A . n A 1 238 VAL 238 401 401 VAL VAL A . n A 1 239 VAL 239 402 402 VAL VAL A . n A 1 240 GLY 240 403 403 GLY GLY A . n A 1 241 PRO 241 404 404 PRO PRO A . n A 1 242 ILE 242 405 405 ILE ILE A . n A 1 243 PRO 243 406 406 PRO PRO A . n A 1 244 LEU 244 407 407 LEU LEU A . n A 1 245 ASP 245 408 408 ASP ASP A . n A 1 246 ARG 246 409 409 ARG ARG A . n A 1 247 GLU 247 410 410 GLU GLU A . n A 1 248 TRP 248 411 411 TRP TRP A . n A 1 249 GLY 249 412 412 GLY GLY A . n A 1 250 ILE 250 413 413 ILE ILE A . n A 1 251 ASP 251 414 414 ASP ASP A . n A 1 252 LYS 252 415 415 LYS LYS A . n A 1 253 PRO 253 416 416 PRO PRO A . n A 1 254 TRP 254 417 417 TRP TRP A . n A 1 255 ILE 255 418 418 ILE ILE A . n A 1 256 GLY 256 419 419 GLY GLY A . n A 1 257 ALA 257 420 420 ALA ALA A . n A 1 258 GLY 258 421 421 GLY GLY A . n A 1 259 PHE 259 422 422 PHE PHE A . n A 1 260 GLY 260 423 423 GLY GLY A . n A 1 261 LEU 261 424 424 LEU LEU A . n A 1 262 GLU 262 425 425 GLU GLU A . n A 1 263 ARG 263 426 426 ARG ARG A . n A 1 264 LEU 264 427 427 LEU LEU A . n A 1 265 LEU 265 428 428 LEU LEU A . n A 1 266 LYS 266 429 429 LYS LYS A . n A 1 267 VAL 267 430 430 VAL VAL A . n A 1 268 LYS 268 431 431 LYS LYS A . n A 1 269 HIS 269 432 432 HIS HIS A . n A 1 270 ASP 270 433 433 ASP ASP A . n A 1 271 PHE 271 434 434 PHE PHE A . n A 1 272 LYS 272 435 435 LYS LYS A . n A 1 273 ASN 273 436 436 ASN ASN A . n A 1 274 ILE 274 437 437 ILE ILE A . n A 1 275 LYS 275 438 438 LYS LYS A . n A 1 276 ARG 276 439 439 ARG ARG A . n A 1 277 ALA 277 440 440 ALA ALA A . n A 1 278 ALA 278 441 441 ALA ALA A . n A 1 279 ARG 279 442 442 ARG ARG A . n A 1 280 SER 280 443 443 SER SER A . n A 1 281 GLY 281 444 444 GLY GLY A . n A 1 282 SER 282 445 445 SER SER A . n A 1 283 TYR 283 446 446 TYR TYR A . n A 1 284 TYR 284 447 447 TYR TYR A . n A 1 285 ASN 285 448 448 ASN ASN A . n A 1 286 GLY 286 449 449 GLY GLY A . n A 1 287 ILE 287 450 450 ILE ILE A . n A 1 288 SER 288 451 451 SER SER A . n A 1 289 THR 289 452 452 THR THR A . n A 1 290 ASN 290 453 453 ASN ASN A . n A 1 291 LEU 291 454 454 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP 1 501 301 ANP ACP A . C 3 MG 1 502 5401 MG MG A . D 3 MG 1 503 5402 MG MG A . E 4 HOH 1 601 2 HOH HOH A . E 4 HOH 2 602 3 HOH HOH A . E 4 HOH 3 603 5 HOH HOH A . E 4 HOH 4 604 6 HOH HOH A . E 4 HOH 5 605 7 HOH HOH A . E 4 HOH 6 606 8 HOH HOH A . E 4 HOH 7 607 9 HOH HOH A . E 4 HOH 8 608 10 HOH HOH A . E 4 HOH 9 609 11 HOH HOH A . E 4 HOH 10 610 12 HOH HOH A . E 4 HOH 11 611 13 HOH HOH A . E 4 HOH 12 612 14 HOH HOH A . E 4 HOH 13 613 15 HOH HOH A . E 4 HOH 14 614 16 HOH HOH A . E 4 HOH 15 615 17 HOH HOH A . E 4 HOH 16 616 18 HOH HOH A . E 4 HOH 17 617 19 HOH HOH A . E 4 HOH 18 618 20 HOH HOH A . E 4 HOH 19 619 21 HOH HOH A . E 4 HOH 20 620 22 HOH HOH A . E 4 HOH 21 621 23 HOH HOH A . E 4 HOH 22 622 24 HOH HOH A . E 4 HOH 23 623 25 HOH HOH A . E 4 HOH 24 624 26 HOH HOH A . E 4 HOH 25 625 27 HOH HOH A . E 4 HOH 26 626 28 HOH HOH A . E 4 HOH 27 627 29 HOH HOH A . E 4 HOH 28 628 30 HOH HOH A . E 4 HOH 29 629 31 HOH HOH A . E 4 HOH 30 630 32 HOH HOH A . E 4 HOH 31 631 34 HOH HOH A . E 4 HOH 32 632 35 HOH HOH A . E 4 HOH 33 633 36 HOH HOH A . E 4 HOH 34 634 37 HOH HOH A . E 4 HOH 35 635 38 HOH HOH A . E 4 HOH 36 636 39 HOH HOH A . E 4 HOH 37 637 41 HOH HOH A . E 4 HOH 38 638 42 HOH HOH A . E 4 HOH 39 639 43 HOH HOH A . E 4 HOH 40 640 44 HOH HOH A . E 4 HOH 41 641 45 HOH HOH A . E 4 HOH 42 642 46 HOH HOH A . E 4 HOH 43 643 47 HOH HOH A . E 4 HOH 44 644 48 HOH HOH A . E 4 HOH 45 645 49 HOH HOH A . E 4 HOH 46 646 50 HOH HOH A . E 4 HOH 47 647 51 HOH HOH A . E 4 HOH 48 648 52 HOH HOH A . E 4 HOH 49 649 53 HOH HOH A . E 4 HOH 50 650 54 HOH HOH A . E 4 HOH 51 651 55 HOH HOH A . E 4 HOH 52 652 56 HOH HOH A . E 4 HOH 53 653 57 HOH HOH A . E 4 HOH 54 654 58 HOH HOH A . E 4 HOH 55 655 59 HOH HOH A . E 4 HOH 56 656 60 HOH HOH A . E 4 HOH 57 657 61 HOH HOH A . E 4 HOH 58 658 62 HOH HOH A . E 4 HOH 59 659 63 HOH HOH A . E 4 HOH 60 660 64 HOH HOH A . E 4 HOH 61 661 65 HOH HOH A . E 4 HOH 62 662 66 HOH HOH A . E 4 HOH 63 663 67 HOH HOH A . E 4 HOH 64 664 69 HOH HOH A . E 4 HOH 65 665 70 HOH HOH A . E 4 HOH 66 666 71 HOH HOH A . E 4 HOH 67 667 72 HOH HOH A . E 4 HOH 68 668 73 HOH HOH A . E 4 HOH 69 669 74 HOH HOH A . E 4 HOH 70 670 75 HOH HOH A . E 4 HOH 71 671 76 HOH HOH A . E 4 HOH 72 672 77 HOH HOH A . E 4 HOH 73 673 78 HOH HOH A . E 4 HOH 74 674 79 HOH HOH A . E 4 HOH 75 675 80 HOH HOH A . E 4 HOH 76 676 81 HOH HOH A . E 4 HOH 77 677 82 HOH HOH A . E 4 HOH 78 678 83 HOH HOH A . E 4 HOH 79 679 84 HOH HOH A . E 4 HOH 80 680 85 HOH HOH A . E 4 HOH 81 681 86 HOH HOH A . E 4 HOH 82 682 87 HOH HOH A . E 4 HOH 83 683 88 HOH HOH A . E 4 HOH 84 684 89 HOH HOH A . E 4 HOH 85 685 90 HOH HOH A . E 4 HOH 86 686 91 HOH HOH A . E 4 HOH 87 687 92 HOH HOH A . E 4 HOH 88 688 93 HOH HOH A . E 4 HOH 89 689 94 HOH HOH A . E 4 HOH 90 690 95 HOH HOH A . E 4 HOH 91 691 96 HOH HOH A . E 4 HOH 92 692 97 HOH HOH A . E 4 HOH 93 693 98 HOH HOH A . E 4 HOH 94 694 99 HOH HOH A . E 4 HOH 95 695 100 HOH HOH A . E 4 HOH 96 696 101 HOH HOH A . E 4 HOH 97 697 102 HOH HOH A . E 4 HOH 98 698 103 HOH HOH A . E 4 HOH 99 699 104 HOH HOH A . E 4 HOH 100 700 105 HOH HOH A . E 4 HOH 101 701 107 HOH HOH A . E 4 HOH 102 702 108 HOH HOH A . E 4 HOH 103 703 110 HOH HOH A . E 4 HOH 104 704 111 HOH HOH A . E 4 HOH 105 705 112 HOH HOH A . E 4 HOH 106 706 113 HOH HOH A . E 4 HOH 107 707 114 HOH HOH A . E 4 HOH 108 708 115 HOH HOH A . E 4 HOH 109 709 116 HOH HOH A . E 4 HOH 110 710 117 HOH HOH A . E 4 HOH 111 711 118 HOH HOH A . E 4 HOH 112 712 120 HOH HOH A . E 4 HOH 113 713 121 HOH HOH A . E 4 HOH 114 714 123 HOH HOH A . E 4 HOH 115 715 124 HOH HOH A . E 4 HOH 116 716 125 HOH HOH A . E 4 HOH 117 717 126 HOH HOH A . E 4 HOH 118 718 127 HOH HOH A . E 4 HOH 119 719 128 HOH HOH A . E 4 HOH 120 720 129 HOH HOH A . E 4 HOH 121 721 130 HOH HOH A . E 4 HOH 122 722 131 HOH HOH A . E 4 HOH 123 723 132 HOH HOH A . E 4 HOH 124 724 133 HOH HOH A . E 4 HOH 125 725 134 HOH HOH A . E 4 HOH 126 726 135 HOH HOH A . E 4 HOH 127 727 136 HOH HOH A . E 4 HOH 128 728 137 HOH HOH A . E 4 HOH 129 729 138 HOH HOH A . E 4 HOH 130 730 139 HOH HOH A . E 4 HOH 131 731 141 HOH HOH A . E 4 HOH 132 732 142 HOH HOH A . E 4 HOH 133 733 147 HOH HOH A . E 4 HOH 134 734 148 HOH HOH A . E 4 HOH 135 735 150 HOH HOH A . E 4 HOH 136 736 152 HOH HOH A . E 4 HOH 137 737 153 HOH HOH A . E 4 HOH 138 738 155 HOH HOH A . E 4 HOH 139 739 156 HOH HOH A . E 4 HOH 140 740 159 HOH HOH A . E 4 HOH 141 741 160 HOH HOH A . E 4 HOH 142 742 163 HOH HOH A . E 4 HOH 143 743 164 HOH HOH A . E 4 HOH 144 744 165 HOH HOH A . E 4 HOH 145 745 167 HOH HOH A . E 4 HOH 146 746 168 HOH HOH A . E 4 HOH 147 747 171 HOH HOH A . E 4 HOH 148 748 172 HOH HOH A . E 4 HOH 149 749 174 HOH HOH A . E 4 HOH 150 750 175 HOH HOH A . E 4 HOH 151 751 176 HOH HOH A . E 4 HOH 152 752 177 HOH HOH A . E 4 HOH 153 753 178 HOH HOH A . E 4 HOH 154 754 179 HOH HOH A . E 4 HOH 155 755 182 HOH HOH A . E 4 HOH 156 756 185 HOH HOH A . E 4 HOH 157 757 188 HOH HOH A . E 4 HOH 158 758 190 HOH HOH A . E 4 HOH 159 759 192 HOH HOH A . E 4 HOH 160 760 193 HOH HOH A . E 4 HOH 161 761 199 HOH HOH A . E 4 HOH 162 762 200 HOH HOH A . E 4 HOH 163 763 203 HOH HOH A . E 4 HOH 164 764 205 HOH HOH A . E 4 HOH 165 765 209 HOH HOH A . E 4 HOH 166 766 213 HOH HOH A . E 4 HOH 167 767 214 HOH HOH A . E 4 HOH 168 768 215 HOH HOH A . E 4 HOH 169 769 217 HOH HOH A . E 4 HOH 170 770 222 HOH HOH A . E 4 HOH 171 771 223 HOH HOH A . E 4 HOH 172 772 233 HOH HOH A . E 4 HOH 173 773 237 HOH HOH A . E 4 HOH 174 774 238 HOH HOH A . E 4 HOH 175 775 239 HOH HOH A . E 4 HOH 176 776 241 HOH HOH A . E 4 HOH 177 777 243 HOH HOH A . E 4 HOH 178 778 246 HOH HOH A . E 4 HOH 179 779 247 HOH HOH A . E 4 HOH 180 780 250 HOH HOH A . E 4 HOH 181 781 251 HOH HOH A . E 4 HOH 182 782 252 HOH HOH A . E 4 HOH 183 783 253 HOH HOH A . E 4 HOH 184 784 254 HOH HOH A . E 4 HOH 185 785 255 HOH HOH A . E 4 HOH 186 786 256 HOH HOH A . E 4 HOH 187 787 257 HOH HOH A . E 4 HOH 188 788 258 HOH HOH A . E 4 HOH 189 789 259 HOH HOH A . E 4 HOH 190 790 260 HOH HOH A . E 4 HOH 191 791 261 HOH HOH A . E 4 HOH 192 792 262 HOH HOH A . E 4 HOH 193 793 263 HOH HOH A . E 4 HOH 194 794 264 HOH HOH A . E 4 HOH 195 795 265 HOH HOH A . E 4 HOH 196 796 266 HOH HOH A . E 4 HOH 197 797 267 HOH HOH A . E 4 HOH 198 798 268 HOH HOH A . E 4 HOH 199 799 269 HOH HOH A . E 4 HOH 200 800 270 HOH HOH A . E 4 HOH 201 801 272 HOH HOH A . E 4 HOH 202 802 273 HOH HOH A . E 4 HOH 203 803 274 HOH HOH A . E 4 HOH 204 804 275 HOH HOH A . E 4 HOH 205 805 276 HOH HOH A . E 4 HOH 206 806 277 HOH HOH A . E 4 HOH 207 807 278 HOH HOH A . E 4 HOH 208 808 280 HOH HOH A . E 4 HOH 209 809 282 HOH HOH A . E 4 HOH 210 810 283 HOH HOH A . E 4 HOH 211 811 284 HOH HOH A . E 4 HOH 212 812 285 HOH HOH A . E 4 HOH 213 813 286 HOH HOH A . E 4 HOH 214 814 288 HOH HOH A . E 4 HOH 215 815 289 HOH HOH A . E 4 HOH 216 816 290 HOH HOH A . E 4 HOH 217 817 292 HOH HOH A . E 4 HOH 218 818 293 HOH HOH A . E 4 HOH 219 819 294 HOH HOH A . E 4 HOH 220 820 295 HOH HOH A . E 4 HOH 221 821 296 HOH HOH A . E 4 HOH 222 822 298 HOH HOH A . E 4 HOH 223 823 300 HOH HOH A . E 4 HOH 224 824 304 HOH HOH A . E 4 HOH 225 825 305 HOH HOH A . E 4 HOH 226 826 310 HOH HOH A . E 4 HOH 227 827 312 HOH HOH A . E 4 HOH 228 828 317 HOH HOH A . E 4 HOH 229 829 318 HOH HOH A . E 4 HOH 230 830 319 HOH HOH A . E 4 HOH 231 831 324 HOH HOH A . E 4 HOH 232 832 331 HOH HOH A . E 4 HOH 233 833 333 HOH HOH A . E 4 HOH 234 834 334 HOH HOH A . E 4 HOH 235 835 335 HOH HOH A . E 4 HOH 236 836 337 HOH HOH A . E 4 HOH 237 837 343 HOH HOH A . E 4 HOH 238 838 344 HOH HOH A . E 4 HOH 239 839 348 HOH HOH A . E 4 HOH 240 840 349 HOH HOH A . E 4 HOH 241 841 355 HOH HOH A . E 4 HOH 242 842 358 HOH HOH A . E 4 HOH 243 843 359 HOH HOH A . E 4 HOH 244 844 362 HOH HOH A . E 4 HOH 245 845 367 HOH HOH A . E 4 HOH 246 846 372 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6890 ? 1 MORE -55 ? 1 'SSA (A^2)' 23290 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 52.4380000000 0.0000000000 -1.0000000000 0.0000000000 90.8252802473 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 233 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 OE1 ? A GLU 233 ? A GLU 396 ? 1_555 48.6 ? 2 OE2 ? A GLU 233 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 OG ? A SER 236 ? A SER 399 ? 1_555 90.0 ? 3 OE1 ? A GLU 233 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 OG ? A SER 236 ? A SER 399 ? 1_555 91.3 ? 4 OE2 ? A GLU 233 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1B ? B ANP . ? A ANP 501 ? 1_555 99.7 ? 5 OE1 ? A GLU 233 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1B ? B ANP . ? A ANP 501 ? 1_555 104.1 ? 6 OG ? A SER 236 ? A SER 399 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1B ? B ANP . ? A ANP 501 ? 1_555 164.6 ? 7 OE2 ? A GLU 233 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1A ? B ANP . ? A ANP 501 ? 1_555 96.1 ? 8 OE1 ? A GLU 233 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1A ? B ANP . ? A ANP 501 ? 1_555 144.7 ? 9 OG ? A SER 236 ? A SER 399 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1A ? B ANP . ? A ANP 501 ? 1_555 86.7 ? 10 O1B ? B ANP . ? A ANP 501 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1A ? B ANP . ? A ANP 501 ? 1_555 80.5 ? 11 OE2 ? A GLU 233 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 813 ? 1_555 131.7 ? 12 OE1 ? A GLU 233 ? A GLU 396 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 813 ? 1_555 91.1 ? 13 OG ? A SER 236 ? A SER 399 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 813 ? 1_555 120.6 ? 14 O1B ? B ANP . ? A ANP 501 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 813 ? 1_555 60.6 ? 15 O1A ? B ANP . ? A ANP 501 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 813 ? 1_555 120.0 ? 16 O2B ? B ANP . ? A ANP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O2G ? B ANP . ? A ANP 501 ? 1_555 82.3 ? 17 O2B ? B ANP . ? A ANP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 752 ? 1_555 86.3 ? 18 O2G ? B ANP . ? A ANP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 752 ? 1_555 168.3 ? 19 O2B ? B ANP . ? A ANP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 768 ? 1_555 88.2 ? 20 O2G ? B ANP . ? A ANP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 768 ? 1_555 91.2 ? 21 O ? E HOH . ? A HOH 752 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 768 ? 1_555 90.8 ? 22 O2B ? B ANP . ? A ANP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 772 ? 1_555 174.1 ? 23 O2G ? B ANP . ? A ANP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 772 ? 1_555 94.2 ? 24 O ? E HOH . ? A HOH 752 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 772 ? 1_555 97.4 ? 25 O ? E HOH . ? A HOH 768 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 772 ? 1_555 87.2 ? 26 O2B ? B ANP . ? A ANP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 779 ? 1_555 91.0 ? 27 O2G ? B ANP . ? A ANP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 779 ? 1_555 81.8 ? 28 O ? E HOH . ? A HOH 752 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 779 ? 1_555 96.1 ? 29 O ? E HOH . ? A HOH 768 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 779 ? 1_555 173.0 ? 30 O ? E HOH . ? A HOH 772 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? E HOH . ? A HOH 779 ? 1_555 93.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-02 2 'Structure model' 1 1 2013-09-04 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.value' 18 3 'Structure model' '_struct_conn.pdbx_dist_value' 19 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3VQV _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;A SEQUENCE DATABASE REFERENCE FOR THIS STRAIN OF SOURCE (METHANOSARCINA MAZEI JCM9314) DOES NOT CURRENTLY EXIST. THIS SEQUENCE CONTAINS 21 A.A. N-TERMINAL TAGS AND C-TERMINAL DOMAIN(RESIDUES 185-454) OF PYLRS. AND THIS PROTEIN IS E444G MUTANT. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N A ASP 414 ? ? O A HOH 845 ? ? 1.77 2 1 O A HOH 638 ? ? O A HOH 709 ? ? 1.98 3 1 O A HOH 608 ? ? O A HOH 771 ? ? 1.99 4 1 O A HOH 750 ? ? O A HOH 814 ? ? 2.04 5 1 O A ILE 413 ? ? O A HOH 709 ? ? 2.09 6 1 O A HOH 628 ? ? O A HOH 704 ? ? 2.10 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 227 ? ? CZ A ARG 227 ? ? NH2 A ARG 227 ? ? 116.05 120.30 -4.25 0.50 N 2 1 NE A ARG 298 ? ? CZ A ARG 298 ? ? NH1 A ARG 298 ? ? 125.79 120.30 5.49 0.50 N 3 1 NE A ARG 298 ? ? CZ A ARG 298 ? ? NH2 A ARG 298 ? ? 115.99 120.30 -4.31 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 237 ? ? -109.54 -84.45 2 1 ASN A 280 ? ? -67.73 5.65 3 1 ASP A 292 ? ? 59.63 -158.96 4 1 ILE A 413 ? ? -84.51 -74.12 5 1 SER A 443 ? ? -171.06 149.40 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 164 ? A MET 1 2 1 Y 1 A GLY 165 ? A GLY 2 3 1 Y 1 A SER 166 ? A SER 3 4 1 Y 1 A SER 167 ? A SER 4 5 1 Y 1 A HIS 168 ? A HIS 5 6 1 Y 1 A HIS 169 ? A HIS 6 7 1 Y 1 A HIS 170 ? A HIS 7 8 1 Y 1 A HIS 171 ? A HIS 8 9 1 Y 1 A HIS 172 ? A HIS 9 10 1 Y 1 A HIS 173 ? A HIS 10 11 1 Y 1 A SER 174 ? A SER 11 12 1 Y 1 A SER 175 ? A SER 12 13 1 Y 1 A GLY 176 ? A GLY 13 14 1 Y 1 A LEU 177 ? A LEU 14 15 1 Y 1 A VAL 178 ? A VAL 15 16 1 Y 1 A PRO 179 ? A PRO 16 17 1 Y 1 A ARG 180 ? A ARG 17 18 1 Y 1 A GLY 181 ? A GLY 18 19 1 Y 1 A SER 182 ? A SER 19 20 1 Y 1 A HIS 183 ? A HIS 20 21 1 Y 1 A MET 184 ? A MET 21 22 1 Y 1 A ALA 185 ? A ALA 22 23 1 Y 1 A SER 186 ? A SER 23 24 1 Y 1 A ALA 187 ? A ALA 24 25 1 Y 1 A ILE 208 ? A ILE 45 26 1 Y 1 A SER 209 ? A SER 46 27 1 Y 1 A LEU 210 ? A LEU 47 28 1 Y 1 A ASN 211 ? A ASN 48 29 1 Y 1 A SER 380 ? A SER 217 30 1 Y 1 A CYS 381 ? A CYS 218 31 1 Y 1 A MET 382 ? A MET 219 32 1 Y 1 A VAL 383 ? A VAL 220 33 1 Y 1 A TYR 384 ? A TYR 221 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ANP PG P N N 14 ANP O1G O N N 15 ANP O2G O N N 16 ANP O3G O N N 17 ANP PB P N N 18 ANP O1B O N N 19 ANP O2B O N N 20 ANP N3B N N N 21 ANP PA P N N 22 ANP O1A O N N 23 ANP O2A O N N 24 ANP O3A O N N 25 ANP "O5'" O N N 26 ANP "C5'" C N N 27 ANP "C4'" C N R 28 ANP "O4'" O N N 29 ANP "C3'" C N S 30 ANP "O3'" O N N 31 ANP "C2'" C N R 32 ANP "O2'" O N N 33 ANP "C1'" C N R 34 ANP N9 N Y N 35 ANP C8 C Y N 36 ANP N7 N Y N 37 ANP C5 C Y N 38 ANP C6 C Y N 39 ANP N6 N N N 40 ANP N1 N Y N 41 ANP C2 C Y N 42 ANP N3 N Y N 43 ANP C4 C Y N 44 ANP HOG2 H N N 45 ANP HOG3 H N N 46 ANP HOB2 H N N 47 ANP HNB1 H N N 48 ANP HOA2 H N N 49 ANP "H5'1" H N N 50 ANP "H5'2" H N N 51 ANP "H4'" H N N 52 ANP "H3'" H N N 53 ANP "HO3'" H N N 54 ANP "H2'" H N N 55 ANP "HO2'" H N N 56 ANP "H1'" H N N 57 ANP H8 H N N 58 ANP HN61 H N N 59 ANP HN62 H N N 60 ANP H2 H N N 61 ARG N N N N 62 ARG CA C N S 63 ARG C C N N 64 ARG O O N N 65 ARG CB C N N 66 ARG CG C N N 67 ARG CD C N N 68 ARG NE N N N 69 ARG CZ C N N 70 ARG NH1 N N N 71 ARG NH2 N N N 72 ARG OXT O N N 73 ARG H H N N 74 ARG H2 H N N 75 ARG HA H N N 76 ARG HB2 H N N 77 ARG HB3 H N N 78 ARG HG2 H N N 79 ARG HG3 H N N 80 ARG HD2 H N N 81 ARG HD3 H N N 82 ARG HE H N N 83 ARG HH11 H N N 84 ARG HH12 H N N 85 ARG HH21 H N N 86 ARG HH22 H N N 87 ARG HXT H N N 88 ASN N N N N 89 ASN CA C N S 90 ASN C C N N 91 ASN O O N N 92 ASN CB C N N 93 ASN CG C N N 94 ASN OD1 O N N 95 ASN ND2 N N N 96 ASN OXT O N N 97 ASN H H N N 98 ASN H2 H N N 99 ASN HA H N N 100 ASN HB2 H N N 101 ASN HB3 H N N 102 ASN HD21 H N N 103 ASN HD22 H N N 104 ASN HXT H N N 105 ASP N N N N 106 ASP CA C N S 107 ASP C C N N 108 ASP O O N N 109 ASP CB C N N 110 ASP CG C N N 111 ASP OD1 O N N 112 ASP OD2 O N N 113 ASP OXT O N N 114 ASP H H N N 115 ASP H2 H N N 116 ASP HA H N N 117 ASP HB2 H N N 118 ASP HB3 H N N 119 ASP HD2 H N N 120 ASP HXT H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 MG MG MG N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 PRO N N N N 322 PRO CA C N S 323 PRO C C N N 324 PRO O O N N 325 PRO CB C N N 326 PRO CG C N N 327 PRO CD C N N 328 PRO OXT O N N 329 PRO H H N N 330 PRO HA H N N 331 PRO HB2 H N N 332 PRO HB3 H N N 333 PRO HG2 H N N 334 PRO HG3 H N N 335 PRO HD2 H N N 336 PRO HD3 H N N 337 PRO HXT H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 THR N N N N 353 THR CA C N S 354 THR C C N N 355 THR O O N N 356 THR CB C N R 357 THR OG1 O N N 358 THR CG2 C N N 359 THR OXT O N N 360 THR H H N N 361 THR H2 H N N 362 THR HA H N N 363 THR HB H N N 364 THR HG1 H N N 365 THR HG21 H N N 366 THR HG22 H N N 367 THR HG23 H N N 368 THR HXT H N N 369 TRP N N N N 370 TRP CA C N S 371 TRP C C N N 372 TRP O O N N 373 TRP CB C N N 374 TRP CG C Y N 375 TRP CD1 C Y N 376 TRP CD2 C Y N 377 TRP NE1 N Y N 378 TRP CE2 C Y N 379 TRP CE3 C Y N 380 TRP CZ2 C Y N 381 TRP CZ3 C Y N 382 TRP CH2 C Y N 383 TRP OXT O N N 384 TRP H H N N 385 TRP H2 H N N 386 TRP HA H N N 387 TRP HB2 H N N 388 TRP HB3 H N N 389 TRP HD1 H N N 390 TRP HE1 H N N 391 TRP HE3 H N N 392 TRP HZ2 H N N 393 TRP HZ3 H N N 394 TRP HH2 H N N 395 TRP HXT H N N 396 TYR N N N N 397 TYR CA C N S 398 TYR C C N N 399 TYR O O N N 400 TYR CB C N N 401 TYR CG C Y N 402 TYR CD1 C Y N 403 TYR CD2 C Y N 404 TYR CE1 C Y N 405 TYR CE2 C Y N 406 TYR CZ C Y N 407 TYR OH O N N 408 TYR OXT O N N 409 TYR H H N N 410 TYR H2 H N N 411 TYR HA H N N 412 TYR HB2 H N N 413 TYR HB3 H N N 414 TYR HD1 H N N 415 TYR HD2 H N N 416 TYR HE1 H N N 417 TYR HE2 H N N 418 TYR HH H N N 419 TYR HXT H N N 420 VAL N N N N 421 VAL CA C N S 422 VAL C C N N 423 VAL O O N N 424 VAL CB C N N 425 VAL CG1 C N N 426 VAL CG2 C N N 427 VAL OXT O N N 428 VAL H H N N 429 VAL H2 H N N 430 VAL HA H N N 431 VAL HB H N N 432 VAL HG11 H N N 433 VAL HG12 H N N 434 VAL HG13 H N N 435 VAL HG21 H N N 436 VAL HG22 H N N 437 VAL HG23 H N N 438 VAL HXT H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ANP PG O1G doub N N 13 ANP PG O2G sing N N 14 ANP PG O3G sing N N 15 ANP PG N3B sing N N 16 ANP O2G HOG2 sing N N 17 ANP O3G HOG3 sing N N 18 ANP PB O1B doub N N 19 ANP PB O2B sing N N 20 ANP PB N3B sing N N 21 ANP PB O3A sing N N 22 ANP O2B HOB2 sing N N 23 ANP N3B HNB1 sing N N 24 ANP PA O1A doub N N 25 ANP PA O2A sing N N 26 ANP PA O3A sing N N 27 ANP PA "O5'" sing N N 28 ANP O2A HOA2 sing N N 29 ANP "O5'" "C5'" sing N N 30 ANP "C5'" "C4'" sing N N 31 ANP "C5'" "H5'1" sing N N 32 ANP "C5'" "H5'2" sing N N 33 ANP "C4'" "O4'" sing N N 34 ANP "C4'" "C3'" sing N N 35 ANP "C4'" "H4'" sing N N 36 ANP "O4'" "C1'" sing N N 37 ANP "C3'" "O3'" sing N N 38 ANP "C3'" "C2'" sing N N 39 ANP "C3'" "H3'" sing N N 40 ANP "O3'" "HO3'" sing N N 41 ANP "C2'" "O2'" sing N N 42 ANP "C2'" "C1'" sing N N 43 ANP "C2'" "H2'" sing N N 44 ANP "O2'" "HO2'" sing N N 45 ANP "C1'" N9 sing N N 46 ANP "C1'" "H1'" sing N N 47 ANP N9 C8 sing Y N 48 ANP N9 C4 sing Y N 49 ANP C8 N7 doub Y N 50 ANP C8 H8 sing N N 51 ANP N7 C5 sing Y N 52 ANP C5 C6 sing Y N 53 ANP C5 C4 doub Y N 54 ANP C6 N6 sing N N 55 ANP C6 N1 doub Y N 56 ANP N6 HN61 sing N N 57 ANP N6 HN62 sing N N 58 ANP N1 C2 sing Y N 59 ANP C2 N3 doub Y N 60 ANP C2 H2 sing N N 61 ANP N3 C4 sing Y N 62 ARG N CA sing N N 63 ARG N H sing N N 64 ARG N H2 sing N N 65 ARG CA C sing N N 66 ARG CA CB sing N N 67 ARG CA HA sing N N 68 ARG C O doub N N 69 ARG C OXT sing N N 70 ARG CB CG sing N N 71 ARG CB HB2 sing N N 72 ARG CB HB3 sing N N 73 ARG CG CD sing N N 74 ARG CG HG2 sing N N 75 ARG CG HG3 sing N N 76 ARG CD NE sing N N 77 ARG CD HD2 sing N N 78 ARG CD HD3 sing N N 79 ARG NE CZ sing N N 80 ARG NE HE sing N N 81 ARG CZ NH1 sing N N 82 ARG CZ NH2 doub N N 83 ARG NH1 HH11 sing N N 84 ARG NH1 HH12 sing N N 85 ARG NH2 HH21 sing N N 86 ARG NH2 HH22 sing N N 87 ARG OXT HXT sing N N 88 ASN N CA sing N N 89 ASN N H sing N N 90 ASN N H2 sing N N 91 ASN CA C sing N N 92 ASN CA CB sing N N 93 ASN CA HA sing N N 94 ASN C O doub N N 95 ASN C OXT sing N N 96 ASN CB CG sing N N 97 ASN CB HB2 sing N N 98 ASN CB HB3 sing N N 99 ASN CG OD1 doub N N 100 ASN CG ND2 sing N N 101 ASN ND2 HD21 sing N N 102 ASN ND2 HD22 sing N N 103 ASN OXT HXT sing N N 104 ASP N CA sing N N 105 ASP N H sing N N 106 ASP N H2 sing N N 107 ASP CA C sing N N 108 ASP CA CB sing N N 109 ASP CA HA sing N N 110 ASP C O doub N N 111 ASP C OXT sing N N 112 ASP CB CG sing N N 113 ASP CB HB2 sing N N 114 ASP CB HB3 sing N N 115 ASP CG OD1 doub N N 116 ASP CG OD2 sing N N 117 ASP OD2 HD2 sing N N 118 ASP OXT HXT sing N N 119 CYS N CA sing N N 120 CYS N H sing N N 121 CYS N H2 sing N N 122 CYS CA C sing N N 123 CYS CA CB sing N N 124 CYS CA HA sing N N 125 CYS C O doub N N 126 CYS C OXT sing N N 127 CYS CB SG sing N N 128 CYS CB HB2 sing N N 129 CYS CB HB3 sing N N 130 CYS SG HG sing N N 131 CYS OXT HXT sing N N 132 GLN N CA sing N N 133 GLN N H sing N N 134 GLN N H2 sing N N 135 GLN CA C sing N N 136 GLN CA CB sing N N 137 GLN CA HA sing N N 138 GLN C O doub N N 139 GLN C OXT sing N N 140 GLN CB CG sing N N 141 GLN CB HB2 sing N N 142 GLN CB HB3 sing N N 143 GLN CG CD sing N N 144 GLN CG HG2 sing N N 145 GLN CG HG3 sing N N 146 GLN CD OE1 doub N N 147 GLN CD NE2 sing N N 148 GLN NE2 HE21 sing N N 149 GLN NE2 HE22 sing N N 150 GLN OXT HXT sing N N 151 GLU N CA sing N N 152 GLU N H sing N N 153 GLU N H2 sing N N 154 GLU CA C sing N N 155 GLU CA CB sing N N 156 GLU CA HA sing N N 157 GLU C O doub N N 158 GLU C OXT sing N N 159 GLU CB CG sing N N 160 GLU CB HB2 sing N N 161 GLU CB HB3 sing N N 162 GLU CG CD sing N N 163 GLU CG HG2 sing N N 164 GLU CG HG3 sing N N 165 GLU CD OE1 doub N N 166 GLU CD OE2 sing N N 167 GLU OE2 HE2 sing N N 168 GLU OXT HXT sing N N 169 GLY N CA sing N N 170 GLY N H sing N N 171 GLY N H2 sing N N 172 GLY CA C sing N N 173 GLY CA HA2 sing N N 174 GLY CA HA3 sing N N 175 GLY C O doub N N 176 GLY C OXT sing N N 177 GLY OXT HXT sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ANP 3 'MAGNESIUM ION' MG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3VQW _pdbx_initial_refinement_model.details ? #