data_3VRM # _entry.id 3VRM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VRM pdb_00003vrm 10.2210/pdb3vrm/pdb RCSB RCSB095414 ? ? WWPDB D_1000095414 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3A4G 'Wild-type Vdh' unspecified PDB 3A4H 'Wild-type Vdh' unspecified PDB 3A4Z 'Highly active Vdh mutant by directed evolution' unspecified PDB 3A50 'Highly active Vdh mutant by directed evolution' unspecified PDB 3A51 'Highly active Vdh mutant by directed evolution' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VRM _pdbx_database_status.recvd_initial_deposition_date 2012-04-12 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nishioka, T.' 1 'Yasutake, Y.' 2 'Tamura, T.' 3 # _citation.id primary _citation.title 'A single mutation at the ferredoxin binding site of p450 vdh enables efficient biocatalytic production of 25-hydroxyvitamin d3.' _citation.journal_abbrev Chembiochem _citation.journal_volume 14 _citation.page_first 2284 _citation.page_last 2291 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1439-4227 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24115473 _citation.pdbx_database_id_DOI 10.1002/cbic.201300386 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yasutake, Y.' 1 ? primary 'Nishioka, T.' 2 ? primary 'Imoto, N.' 3 ? primary 'Tamura, T.' 4 ? # _cell.entry_id 3VRM _cell.length_a 61.421 _cell.length_b 105.521 _cell.length_c 141.988 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VRM _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vitamin D(3) 25-hydroxylase' 45457.578 1 1.14.13.15 T107A ? ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 non-polymer syn ;(1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6-METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4-YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL ; 384.638 1 ? ? ? ? 4 water nat water 18.015 36 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cytochrome P450' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MALTTTGTEQHDLFSGTFWQNPHPAYAALRAEDPVRKLALPDGPVWLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMP ATPTPMMILMDPPDHTRLRKLVGRSFAVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGVPAED RDDFSAWSSVLVDDSPADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHET TVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDAD WMPEPDRLDITRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGP RSALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MALTTTGTEQHDLFSGTFWQNPHPAYAALRAEDPVRKLALPDGPVWLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMP ATPTPMMILMDPPDHTRLRKLVGRSFAVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGVPAED RDDFSAWSSVLVDDSPADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHET TVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDAD WMPEPDRLDITRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGP RSALEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 LEU n 1 4 THR n 1 5 THR n 1 6 THR n 1 7 GLY n 1 8 THR n 1 9 GLU n 1 10 GLN n 1 11 HIS n 1 12 ASP n 1 13 LEU n 1 14 PHE n 1 15 SER n 1 16 GLY n 1 17 THR n 1 18 PHE n 1 19 TRP n 1 20 GLN n 1 21 ASN n 1 22 PRO n 1 23 HIS n 1 24 PRO n 1 25 ALA n 1 26 TYR n 1 27 ALA n 1 28 ALA n 1 29 LEU n 1 30 ARG n 1 31 ALA n 1 32 GLU n 1 33 ASP n 1 34 PRO n 1 35 VAL n 1 36 ARG n 1 37 LYS n 1 38 LEU n 1 39 ALA n 1 40 LEU n 1 41 PRO n 1 42 ASP n 1 43 GLY n 1 44 PRO n 1 45 VAL n 1 46 TRP n 1 47 LEU n 1 48 LEU n 1 49 THR n 1 50 ARG n 1 51 TYR n 1 52 ALA n 1 53 ASP n 1 54 VAL n 1 55 ARG n 1 56 GLU n 1 57 ALA n 1 58 PHE n 1 59 VAL n 1 60 ASP n 1 61 PRO n 1 62 ARG n 1 63 LEU n 1 64 SER n 1 65 LYS n 1 66 ASP n 1 67 TRP n 1 68 ARG n 1 69 HIS n 1 70 THR n 1 71 LEU n 1 72 PRO n 1 73 GLU n 1 74 ASP n 1 75 GLN n 1 76 ARG n 1 77 ALA n 1 78 ASP n 1 79 MET n 1 80 PRO n 1 81 ALA n 1 82 THR n 1 83 PRO n 1 84 THR n 1 85 PRO n 1 86 MET n 1 87 MET n 1 88 ILE n 1 89 LEU n 1 90 MET n 1 91 ASP n 1 92 PRO n 1 93 PRO n 1 94 ASP n 1 95 HIS n 1 96 THR n 1 97 ARG n 1 98 LEU n 1 99 ARG n 1 100 LYS n 1 101 LEU n 1 102 VAL n 1 103 GLY n 1 104 ARG n 1 105 SER n 1 106 PHE n 1 107 ALA n 1 108 VAL n 1 109 ARG n 1 110 ARG n 1 111 MET n 1 112 ASN n 1 113 GLU n 1 114 LEU n 1 115 GLU n 1 116 PRO n 1 117 ARG n 1 118 ILE n 1 119 THR n 1 120 GLU n 1 121 ILE n 1 122 ALA n 1 123 ASP n 1 124 GLY n 1 125 LEU n 1 126 LEU n 1 127 ALA n 1 128 GLY n 1 129 LEU n 1 130 PRO n 1 131 THR n 1 132 ASP n 1 133 GLY n 1 134 PRO n 1 135 VAL n 1 136 ASP n 1 137 LEU n 1 138 MET n 1 139 ARG n 1 140 GLU n 1 141 TYR n 1 142 ALA n 1 143 PHE n 1 144 GLN n 1 145 ILE n 1 146 PRO n 1 147 VAL n 1 148 GLN n 1 149 VAL n 1 150 ILE n 1 151 CYS n 1 152 GLU n 1 153 LEU n 1 154 LEU n 1 155 GLY n 1 156 VAL n 1 157 PRO n 1 158 ALA n 1 159 GLU n 1 160 ASP n 1 161 ARG n 1 162 ASP n 1 163 ASP n 1 164 PHE n 1 165 SER n 1 166 ALA n 1 167 TRP n 1 168 SER n 1 169 SER n 1 170 VAL n 1 171 LEU n 1 172 VAL n 1 173 ASP n 1 174 ASP n 1 175 SER n 1 176 PRO n 1 177 ALA n 1 178 ASP n 1 179 ASP n 1 180 LYS n 1 181 ASN n 1 182 ALA n 1 183 ALA n 1 184 MET n 1 185 GLY n 1 186 LYS n 1 187 LEU n 1 188 HIS n 1 189 GLY n 1 190 TYR n 1 191 LEU n 1 192 SER n 1 193 ASP n 1 194 LEU n 1 195 LEU n 1 196 GLU n 1 197 ARG n 1 198 LYS n 1 199 ARG n 1 200 THR n 1 201 GLU n 1 202 PRO n 1 203 ASP n 1 204 ASP n 1 205 ALA n 1 206 LEU n 1 207 LEU n 1 208 SER n 1 209 SER n 1 210 LEU n 1 211 LEU n 1 212 ALA n 1 213 VAL n 1 214 SER n 1 215 ASP n 1 216 GLU n 1 217 ASP n 1 218 GLY n 1 219 ASP n 1 220 ARG n 1 221 LEU n 1 222 SER n 1 223 GLN n 1 224 GLU n 1 225 GLU n 1 226 LEU n 1 227 VAL n 1 228 ALA n 1 229 MET n 1 230 ALA n 1 231 MET n 1 232 LEU n 1 233 LEU n 1 234 LEU n 1 235 ILE n 1 236 ALA n 1 237 GLY n 1 238 HIS n 1 239 GLU n 1 240 THR n 1 241 THR n 1 242 VAL n 1 243 ASN n 1 244 LEU n 1 245 ILE n 1 246 GLY n 1 247 ASN n 1 248 GLY n 1 249 VAL n 1 250 LEU n 1 251 ALA n 1 252 LEU n 1 253 LEU n 1 254 THR n 1 255 HIS n 1 256 PRO n 1 257 ASP n 1 258 GLN n 1 259 ARG n 1 260 LYS n 1 261 LEU n 1 262 LEU n 1 263 ALA n 1 264 GLU n 1 265 ASP n 1 266 PRO n 1 267 SER n 1 268 LEU n 1 269 ILE n 1 270 SER n 1 271 SER n 1 272 ALA n 1 273 VAL n 1 274 GLU n 1 275 GLU n 1 276 PHE n 1 277 LEU n 1 278 ARG n 1 279 PHE n 1 280 ASP n 1 281 SER n 1 282 PRO n 1 283 VAL n 1 284 SER n 1 285 GLN n 1 286 ALA n 1 287 PRO n 1 288 ILE n 1 289 ARG n 1 290 PHE n 1 291 THR n 1 292 ALA n 1 293 GLU n 1 294 ASP n 1 295 VAL n 1 296 THR n 1 297 TYR n 1 298 SER n 1 299 GLY n 1 300 VAL n 1 301 THR n 1 302 ILE n 1 303 PRO n 1 304 ALA n 1 305 GLY n 1 306 GLU n 1 307 MET n 1 308 VAL n 1 309 MET n 1 310 LEU n 1 311 GLY n 1 312 LEU n 1 313 ALA n 1 314 ALA n 1 315 ALA n 1 316 ASN n 1 317 ARG n 1 318 ASP n 1 319 ALA n 1 320 ASP n 1 321 TRP n 1 322 MET n 1 323 PRO n 1 324 GLU n 1 325 PRO n 1 326 ASP n 1 327 ARG n 1 328 LEU n 1 329 ASP n 1 330 ILE n 1 331 THR n 1 332 ARG n 1 333 ASP n 1 334 ALA n 1 335 SER n 1 336 GLY n 1 337 GLY n 1 338 VAL n 1 339 PHE n 1 340 PHE n 1 341 GLY n 1 342 HIS n 1 343 GLY n 1 344 ILE n 1 345 HIS n 1 346 PHE n 1 347 CYS n 1 348 LEU n 1 349 GLY n 1 350 ALA n 1 351 GLN n 1 352 LEU n 1 353 ALA n 1 354 ARG n 1 355 LEU n 1 356 GLU n 1 357 GLY n 1 358 ARG n 1 359 VAL n 1 360 ALA n 1 361 ILE n 1 362 GLY n 1 363 ARG n 1 364 LEU n 1 365 PHE n 1 366 ALA n 1 367 ASP n 1 368 ARG n 1 369 PRO n 1 370 GLU n 1 371 LEU n 1 372 ALA n 1 373 LEU n 1 374 ALA n 1 375 VAL n 1 376 GLY n 1 377 LEU n 1 378 ASP n 1 379 GLU n 1 380 LEU n 1 381 VAL n 1 382 TYR n 1 383 ARG n 1 384 GLU n 1 385 SER n 1 386 THR n 1 387 LEU n 1 388 VAL n 1 389 ARG n 1 390 GLY n 1 391 LEU n 1 392 SER n 1 393 ARG n 1 394 MET n 1 395 PRO n 1 396 VAL n 1 397 THR n 1 398 MET n 1 399 GLY n 1 400 PRO n 1 401 ARG n 1 402 SER n 1 403 ALA n 1 404 LEU n 1 405 GLU n 1 406 HIS n 1 407 HIS n 1 408 HIS n 1 409 HIS n 1 410 HIS n 1 411 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Amycolata autotrophica' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene vdh _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NBRC 12743' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudonocardia autotrophica' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2074 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET22 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CPVDH_PSEAH _struct_ref.pdbx_db_accession C4B644 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MALTTTGTEQHDLFSGTFWQNPHPAYAALRAEDPVRKLALPDGPVWLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMP ATPTPMMILMDPPDHTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGVPAED RDDFSAWSSVLVDDSPADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHET TVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDAD WMPEPDRLDITRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGP RSA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3VRM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 403 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C4B644 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 403 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 403 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3VRM ALA A 107 ? UNP C4B644 THR 107 'engineered mutation' 107 1 1 3VRM LEU A 404 ? UNP C4B644 ? ? 'expression tag' 404 2 1 3VRM GLU A 405 ? UNP C4B644 ? ? 'expression tag' 405 3 1 3VRM HIS A 406 ? UNP C4B644 ? ? 'expression tag' 406 4 1 3VRM HIS A 407 ? UNP C4B644 ? ? 'expression tag' 407 5 1 3VRM HIS A 408 ? UNP C4B644 ? ? 'expression tag' 408 6 1 3VRM HIS A 409 ? UNP C4B644 ? ? 'expression tag' 409 7 1 3VRM HIS A 410 ? UNP C4B644 ? ? 'expression tag' 410 8 1 3VRM HIS A 411 ? UNP C4B644 ? ? 'expression tag' 411 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 VD3 non-polymer . ;(1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6-METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4-YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL ; 'VITAMIN D3' 'C27 H44 O' 384.638 # _exptl.entry_id 3VRM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_percent_sol 51.39 _exptl_crystal.description 'The entry contains Friedel pairs in F_Plus/Minus columns' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pdbx_details '21% PEG 3350, 0.2M NaCl, 0.1M bis-tris, pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.pdbx_collection_date 2011-11-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-5A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 3VRM _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.57 _reflns.number_obs 14156 _reflns.number_all ? _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.2 _reflns.B_iso_Wilson_estimate 68.3 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.57 _reflns_shell.d_res_low 2.72 _reflns_shell.percent_possible_all 92.3 _reflns_shell.Rmerge_I_obs 0.557 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.05 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4213 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3VRM _refine.ls_number_reflns_obs 14156 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.57 _refine.ls_percent_reflns_obs 98.62 _refine.ls_R_factor_obs 0.18906 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18681 _refine.ls_R_factor_R_free 0.23080 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 741 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.B_iso_mean 76.693 _refine.aniso_B[1][1] -3.43 _refine.aniso_B[2][2] 6.74 _refine.aniso_B[3][3] -3.31 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'the entry contains Friedel pairs in F_Plus/Minus columns. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model 'PDB ENTRY 3A50' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.807 _refine.pdbx_overall_ESU_R_Free 0.290 _refine.overall_SU_ML 0.264 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 23.368 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3105 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 71 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 3212 _refine_hist.d_res_high 2.57 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.008 0.019 ? 3281 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.934 2.025 ? 4485 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.644 5.000 ? 401 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 29.650 23.217 ? 143 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 18.226 15.000 ? 519 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20.473 15.000 ? 32 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.084 0.200 ? 503 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.007 0.021 ? 2509 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.569 _refine_ls_shell.d_res_low 2.636 _refine_ls_shell.number_reflns_R_work 805 _refine_ls_shell.R_factor_R_work 0.305 _refine_ls_shell.percent_reflns_obs 83.30 _refine_ls_shell.R_factor_R_free 0.423 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3VRM _struct.title 'Structure of cytochrome P450 Vdh mutant T107A with bound vitamin D3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VRM _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'CYTOCHROME P450, VITAMIN D3, MONOOXYGENASE, OXIDOREDUCTASE, P450 fold, Hemoprotein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 15 ? GLN A 20 ? SER A 15 GLN A 20 5 ? 6 HELX_P HELX_P2 2 PRO A 22 ? ASP A 33 ? PRO A 22 ASP A 33 1 ? 12 HELX_P HELX_P3 3 ARG A 50 ? VAL A 59 ? ARG A 50 VAL A 59 1 ? 10 HELX_P HELX_P4 4 ASP A 66 ? THR A 70 ? ASP A 66 THR A 70 5 ? 5 HELX_P HELX_P5 5 PRO A 72 ? ARG A 76 ? PRO A 72 ARG A 76 5 ? 5 HELX_P HELX_P6 6 MET A 86 ? MET A 90 ? MET A 86 MET A 90 5 ? 5 HELX_P HELX_P7 7 PRO A 93 ? ARG A 104 ? PRO A 93 ARG A 104 1 ? 12 HELX_P HELX_P8 8 ALA A 107 ? GLU A 113 ? ALA A 107 GLU A 113 1 ? 7 HELX_P HELX_P9 9 LEU A 114 ? ALA A 127 ? LEU A 114 ALA A 127 1 ? 14 HELX_P HELX_P10 10 LEU A 137 ? TYR A 141 ? LEU A 137 TYR A 141 1 ? 5 HELX_P HELX_P11 11 PHE A 143 ? GLY A 155 ? PHE A 143 GLY A 155 1 ? 13 HELX_P HELX_P12 12 PRO A 157 ? GLU A 159 ? PRO A 157 GLU A 159 5 ? 3 HELX_P HELX_P13 13 ASP A 160 ? ASP A 173 ? ASP A 160 ASP A 173 1 ? 14 HELX_P HELX_P14 14 PRO A 176 ? GLU A 201 ? PRO A 176 GLU A 201 1 ? 26 HELX_P HELX_P15 15 ALA A 205 ? ASP A 217 ? ALA A 205 ASP A 217 1 ? 13 HELX_P HELX_P16 16 SER A 222 ? HIS A 255 ? SER A 222 HIS A 255 1 ? 34 HELX_P HELX_P17 17 HIS A 255 ? ASP A 265 ? HIS A 255 ASP A 265 1 ? 11 HELX_P HELX_P18 18 LEU A 268 ? ASP A 280 ? LEU A 268 ASP A 280 1 ? 13 HELX_P HELX_P19 19 GLY A 311 ? ASN A 316 ? GLY A 311 ASN A 316 1 ? 6 HELX_P HELX_P20 20 GLY A 349 ? ARG A 368 ? GLY A 349 ARG A 368 1 ? 20 HELX_P HELX_P21 21 GLY A 376 ? LEU A 380 ? GLY A 376 LEU A 380 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id metalc1 _struct_conn.conn_type_id metalc _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 347 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id FE _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 347 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.378 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 92 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 92 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 93 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 93 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.26 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 35 ? LEU A 40 ? VAL A 35 LEU A 40 A 2 GLY A 43 ? LEU A 48 ? GLY A 43 LEU A 48 A 3 MET A 307 ? LEU A 310 ? MET A 307 LEU A 310 A 4 ARG A 289 ? THR A 291 ? ARG A 289 THR A 291 A 5 LEU A 63 ? SER A 64 ? LEU A 63 SER A 64 B 1 PRO A 134 ? ASP A 136 ? PRO A 134 ASP A 136 B 2 PRO A 395 ? THR A 397 ? PRO A 395 THR A 397 B 3 ALA A 372 ? LEU A 373 ? ALA A 372 LEU A 373 C 1 VAL A 295 ? TYR A 297 ? VAL A 295 TYR A 297 C 2 VAL A 300 ? ILE A 302 ? VAL A 300 ILE A 302 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 36 ? N ARG A 36 O LEU A 47 ? O LEU A 47 A 2 3 N TRP A 46 ? N TRP A 46 O MET A 309 ? O MET A 309 A 3 4 O VAL A 308 ? O VAL A 308 N ARG A 289 ? N ARG A 289 A 4 5 O PHE A 290 ? O PHE A 290 N SER A 64 ? N SER A 64 B 1 2 N VAL A 135 ? N VAL A 135 O VAL A 396 ? O VAL A 396 B 2 3 O THR A 397 ? O THR A 397 N ALA A 372 ? N ALA A 372 C 1 2 N TYR A 297 ? N TYR A 297 O VAL A 300 ? O VAL A 300 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HEM 501 ? 24 'BINDING SITE FOR RESIDUE HEM A 501' AC2 Software A VD3 502 ? 3 'BINDING SITE FOR RESIDUE VD3 A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 PHE A 58 ? PHE A 58 . ? 1_555 ? 2 AC1 24 LYS A 65 ? LYS A 65 . ? 1_555 ? 3 AC1 24 MET A 87 ? MET A 87 . ? 1_555 ? 4 AC1 24 ILE A 88 ? ILE A 88 . ? 1_555 ? 5 AC1 24 HIS A 95 ? HIS A 95 . ? 1_555 ? 6 AC1 24 ARG A 99 ? ARG A 99 . ? 1_555 ? 7 AC1 24 LEU A 232 ? LEU A 232 . ? 1_555 ? 8 AC1 24 ALA A 236 ? ALA A 236 . ? 1_555 ? 9 AC1 24 THR A 240 ? THR A 240 . ? 1_555 ? 10 AC1 24 THR A 241 ? THR A 241 . ? 1_555 ? 11 AC1 24 PRO A 282 ? PRO A 282 . ? 1_555 ? 12 AC1 24 VAL A 283 ? VAL A 283 . ? 1_555 ? 13 AC1 24 ALA A 286 ? ALA A 286 . ? 1_555 ? 14 AC1 24 PRO A 287 ? PRO A 287 . ? 1_555 ? 15 AC1 24 ARG A 289 ? ARG A 289 . ? 1_555 ? 16 AC1 24 LEU A 312 ? LEU A 312 . ? 1_555 ? 17 AC1 24 PHE A 339 ? PHE A 339 . ? 1_555 ? 18 AC1 24 PHE A 340 ? PHE A 340 . ? 1_555 ? 19 AC1 24 GLY A 341 ? GLY A 341 . ? 1_555 ? 20 AC1 24 HIS A 345 ? HIS A 345 . ? 1_555 ? 21 AC1 24 CYS A 347 ? CYS A 347 . ? 1_555 ? 22 AC1 24 GLY A 349 ? GLY A 349 . ? 1_555 ? 23 AC1 24 VD3 C . ? VD3 A 502 . ? 1_555 ? 24 AC1 24 HOH D . ? HOH A 620 . ? 1_555 ? 25 AC2 3 ILE A 235 ? ILE A 235 . ? 1_555 ? 26 AC2 3 ALA A 236 ? ALA A 236 . ? 1_555 ? 27 AC2 3 HEM B . ? HEM A 501 . ? 1_555 ? # _database_PDB_matrix.entry_id 3VRM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3VRM _atom_sites.fract_transf_matrix[1][1] 0.016281 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009477 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007043 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 TRP 46 46 46 TRP TRP A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 TRP 67 67 67 TRP TRP A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 MET 79 79 79 MET MET A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 MET 86 86 86 MET MET A . n A 1 87 MET 87 87 87 MET MET A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 MET 90 90 90 MET MET A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 HIS 95 95 95 HIS HIS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 MET 111 111 111 MET MET A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 ILE 118 118 118 ILE ILE A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 THR 131 131 131 THR THR A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 MET 138 138 138 MET MET A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 TYR 141 141 141 TYR TYR A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 GLN 148 148 148 GLN GLN A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 SER 165 165 165 SER SER A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 TRP 167 167 167 TRP TRP A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 ASP 173 173 173 ASP ASP A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 PRO 176 176 176 PRO PRO A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 MET 184 184 184 MET MET A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 LYS 186 186 186 LYS LYS A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 HIS 188 188 188 HIS HIS A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 TYR 190 190 190 TYR TYR A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 SER 192 192 192 SER SER A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 ARG 197 197 197 ARG ARG A . n A 1 198 LYS 198 198 198 LYS LYS A . n A 1 199 ARG 199 199 199 ARG ARG A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 PRO 202 202 202 PRO PRO A . n A 1 203 ASP 203 203 203 ASP ASP A . n A 1 204 ASP 204 204 204 ASP ASP A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 SER 208 208 208 SER SER A . n A 1 209 SER 209 209 209 SER SER A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 ALA 212 212 212 ALA ALA A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 ASP 215 215 215 ASP ASP A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 ASP 217 217 217 ASP ASP A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 SER 222 222 222 SER SER A . n A 1 223 GLN 223 223 223 GLN GLN A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 GLU 225 225 225 GLU GLU A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 VAL 227 227 227 VAL VAL A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 MET 229 229 229 MET MET A . n A 1 230 ALA 230 230 230 ALA ALA A . n A 1 231 MET 231 231 231 MET MET A . n A 1 232 LEU 232 232 232 LEU LEU A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 ALA 236 236 236 ALA ALA A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 HIS 238 238 238 HIS HIS A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 THR 240 240 240 THR THR A . n A 1 241 THR 241 241 241 THR THR A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 ASN 243 243 243 ASN ASN A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 ILE 245 245 245 ILE ILE A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 ASN 247 247 247 ASN ASN A . n A 1 248 GLY 248 248 248 GLY GLY A . n A 1 249 VAL 249 249 249 VAL VAL A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 ALA 251 251 251 ALA ALA A . n A 1 252 LEU 252 252 252 LEU LEU A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 THR 254 254 254 THR THR A . n A 1 255 HIS 255 255 255 HIS HIS A . n A 1 256 PRO 256 256 256 PRO PRO A . n A 1 257 ASP 257 257 257 ASP ASP A . n A 1 258 GLN 258 258 258 GLN GLN A . n A 1 259 ARG 259 259 259 ARG ARG A . n A 1 260 LYS 260 260 260 LYS LYS A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 ALA 263 263 263 ALA ALA A . n A 1 264 GLU 264 264 264 GLU GLU A . n A 1 265 ASP 265 265 265 ASP ASP A . n A 1 266 PRO 266 266 266 PRO PRO A . n A 1 267 SER 267 267 267 SER SER A . n A 1 268 LEU 268 268 268 LEU LEU A . n A 1 269 ILE 269 269 269 ILE ILE A . n A 1 270 SER 270 270 270 SER SER A . n A 1 271 SER 271 271 271 SER SER A . n A 1 272 ALA 272 272 272 ALA ALA A . n A 1 273 VAL 273 273 273 VAL VAL A . n A 1 274 GLU 274 274 274 GLU GLU A . n A 1 275 GLU 275 275 275 GLU GLU A . n A 1 276 PHE 276 276 276 PHE PHE A . n A 1 277 LEU 277 277 277 LEU LEU A . n A 1 278 ARG 278 278 278 ARG ARG A . n A 1 279 PHE 279 279 279 PHE PHE A . n A 1 280 ASP 280 280 280 ASP ASP A . n A 1 281 SER 281 281 281 SER SER A . n A 1 282 PRO 282 282 282 PRO PRO A . n A 1 283 VAL 283 283 283 VAL VAL A . n A 1 284 SER 284 284 284 SER SER A . n A 1 285 GLN 285 285 285 GLN GLN A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 PRO 287 287 287 PRO PRO A . n A 1 288 ILE 288 288 288 ILE ILE A . n A 1 289 ARG 289 289 289 ARG ARG A . n A 1 290 PHE 290 290 290 PHE PHE A . n A 1 291 THR 291 291 291 THR THR A . n A 1 292 ALA 292 292 292 ALA ALA A . n A 1 293 GLU 293 293 293 GLU GLU A . n A 1 294 ASP 294 294 294 ASP ASP A . n A 1 295 VAL 295 295 295 VAL VAL A . n A 1 296 THR 296 296 296 THR THR A . n A 1 297 TYR 297 297 297 TYR TYR A . n A 1 298 SER 298 298 298 SER SER A . n A 1 299 GLY 299 299 299 GLY GLY A . n A 1 300 VAL 300 300 300 VAL VAL A . n A 1 301 THR 301 301 301 THR THR A . n A 1 302 ILE 302 302 302 ILE ILE A . n A 1 303 PRO 303 303 303 PRO PRO A . n A 1 304 ALA 304 304 304 ALA ALA A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 GLU 306 306 306 GLU GLU A . n A 1 307 MET 307 307 307 MET MET A . n A 1 308 VAL 308 308 308 VAL VAL A . n A 1 309 MET 309 309 309 MET MET A . n A 1 310 LEU 310 310 310 LEU LEU A . n A 1 311 GLY 311 311 311 GLY GLY A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 ALA 313 313 313 ALA ALA A . n A 1 314 ALA 314 314 314 ALA ALA A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 ASN 316 316 316 ASN ASN A . n A 1 317 ARG 317 317 317 ARG ARG A . n A 1 318 ASP 318 318 318 ASP ASP A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 ASP 320 320 320 ASP ASP A . n A 1 321 TRP 321 321 321 TRP TRP A . n A 1 322 MET 322 322 322 MET MET A . n A 1 323 PRO 323 323 323 PRO PRO A . n A 1 324 GLU 324 324 324 GLU GLU A . n A 1 325 PRO 325 325 325 PRO PRO A . n A 1 326 ASP 326 326 326 ASP ASP A . n A 1 327 ARG 327 327 327 ARG ARG A . n A 1 328 LEU 328 328 328 LEU LEU A . n A 1 329 ASP 329 329 329 ASP ASP A . n A 1 330 ILE 330 330 330 ILE ILE A . n A 1 331 THR 331 331 331 THR THR A . n A 1 332 ARG 332 332 332 ARG ARG A . n A 1 333 ASP 333 333 333 ASP ASP A . n A 1 334 ALA 334 334 334 ALA ALA A . n A 1 335 SER 335 335 335 SER SER A . n A 1 336 GLY 336 336 336 GLY GLY A . n A 1 337 GLY 337 337 337 GLY GLY A . n A 1 338 VAL 338 338 338 VAL VAL A . n A 1 339 PHE 339 339 339 PHE PHE A . n A 1 340 PHE 340 340 340 PHE PHE A . n A 1 341 GLY 341 341 341 GLY GLY A . n A 1 342 HIS 342 342 342 HIS HIS A . n A 1 343 GLY 343 343 343 GLY GLY A . n A 1 344 ILE 344 344 344 ILE ILE A . n A 1 345 HIS 345 345 345 HIS HIS A . n A 1 346 PHE 346 346 346 PHE PHE A . n A 1 347 CYS 347 347 347 CYS CYS A . n A 1 348 LEU 348 348 348 LEU LEU A . n A 1 349 GLY 349 349 349 GLY GLY A . n A 1 350 ALA 350 350 350 ALA ALA A . n A 1 351 GLN 351 351 351 GLN GLN A . n A 1 352 LEU 352 352 352 LEU LEU A . n A 1 353 ALA 353 353 353 ALA ALA A . n A 1 354 ARG 354 354 354 ARG ARG A . n A 1 355 LEU 355 355 355 LEU LEU A . n A 1 356 GLU 356 356 356 GLU GLU A . n A 1 357 GLY 357 357 357 GLY GLY A . n A 1 358 ARG 358 358 358 ARG ARG A . n A 1 359 VAL 359 359 359 VAL VAL A . n A 1 360 ALA 360 360 360 ALA ALA A . n A 1 361 ILE 361 361 361 ILE ILE A . n A 1 362 GLY 362 362 362 GLY GLY A . n A 1 363 ARG 363 363 363 ARG ARG A . n A 1 364 LEU 364 364 364 LEU LEU A . n A 1 365 PHE 365 365 365 PHE PHE A . n A 1 366 ALA 366 366 366 ALA ALA A . n A 1 367 ASP 367 367 367 ASP ASP A . n A 1 368 ARG 368 368 368 ARG ARG A . n A 1 369 PRO 369 369 369 PRO PRO A . n A 1 370 GLU 370 370 370 GLU GLU A . n A 1 371 LEU 371 371 371 LEU LEU A . n A 1 372 ALA 372 372 372 ALA ALA A . n A 1 373 LEU 373 373 373 LEU LEU A . n A 1 374 ALA 374 374 374 ALA ALA A . n A 1 375 VAL 375 375 375 VAL VAL A . n A 1 376 GLY 376 376 376 GLY GLY A . n A 1 377 LEU 377 377 377 LEU LEU A . n A 1 378 ASP 378 378 378 ASP ASP A . n A 1 379 GLU 379 379 379 GLU GLU A . n A 1 380 LEU 380 380 380 LEU LEU A . n A 1 381 VAL 381 381 381 VAL VAL A . n A 1 382 TYR 382 382 382 TYR TYR A . n A 1 383 ARG 383 383 383 ARG ARG A . n A 1 384 GLU 384 384 384 GLU GLU A . n A 1 385 SER 385 385 385 SER SER A . n A 1 386 THR 386 386 386 THR THR A . n A 1 387 LEU 387 387 387 LEU LEU A . n A 1 388 VAL 388 388 388 VAL VAL A . n A 1 389 ARG 389 389 389 ARG ARG A . n A 1 390 GLY 390 390 390 GLY GLY A . n A 1 391 LEU 391 391 391 LEU LEU A . n A 1 392 SER 392 392 392 SER SER A . n A 1 393 ARG 393 393 393 ARG ARG A . n A 1 394 MET 394 394 394 MET MET A . n A 1 395 PRO 395 395 395 PRO PRO A . n A 1 396 VAL 396 396 396 VAL VAL A . n A 1 397 THR 397 397 397 THR THR A . n A 1 398 MET 398 398 398 MET MET A . n A 1 399 GLY 399 399 399 GLY GLY A . n A 1 400 PRO 400 400 400 PRO PRO A . n A 1 401 ARG 401 401 401 ARG ARG A . n A 1 402 SER 402 402 402 SER SER A . n A 1 403 ALA 403 403 403 ALA ALA A . n A 1 404 LEU 404 404 ? ? ? A . n A 1 405 GLU 405 405 ? ? ? A . n A 1 406 HIS 406 406 ? ? ? A . n A 1 407 HIS 407 407 ? ? ? A . n A 1 408 HIS 408 408 ? ? ? A . n A 1 409 HIS 409 409 ? ? ? A . n A 1 410 HIS 410 410 ? ? ? A . n A 1 411 HIS 411 411 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM 1 501 411 HEM HEM A . C 3 VD3 1 502 421 VD3 VD3 A . D 4 HOH 1 601 501 HOH HOH A . D 4 HOH 2 602 502 HOH HOH A . D 4 HOH 3 603 503 HOH HOH A . D 4 HOH 4 604 504 HOH HOH A . D 4 HOH 5 605 505 HOH HOH A . D 4 HOH 6 606 506 HOH HOH A . D 4 HOH 7 607 507 HOH HOH A . D 4 HOH 8 608 508 HOH HOH A . D 4 HOH 9 609 509 HOH HOH A . D 4 HOH 10 610 510 HOH HOH A . D 4 HOH 11 611 511 HOH HOH A . D 4 HOH 12 612 512 HOH HOH A . D 4 HOH 13 613 513 HOH HOH A . D 4 HOH 14 614 514 HOH HOH A . D 4 HOH 15 615 515 HOH HOH A . D 4 HOH 16 616 516 HOH HOH A . D 4 HOH 17 617 517 HOH HOH A . D 4 HOH 18 618 518 HOH HOH A . D 4 HOH 19 619 519 HOH HOH A . D 4 HOH 20 620 520 HOH HOH A . D 4 HOH 21 621 521 HOH HOH A . D 4 HOH 22 622 522 HOH HOH A . D 4 HOH 23 623 523 HOH HOH A . D 4 HOH 24 624 524 HOH HOH A . D 4 HOH 25 625 525 HOH HOH A . D 4 HOH 26 626 526 HOH HOH A . D 4 HOH 27 627 527 HOH HOH A . D 4 HOH 28 628 528 HOH HOH A . D 4 HOH 29 629 529 HOH HOH A . D 4 HOH 30 630 530 HOH HOH A . D 4 HOH 31 631 531 HOH HOH A . D 4 HOH 32 632 532 HOH HOH A . D 4 HOH 33 633 533 HOH HOH A . D 4 HOH 34 634 534 HOH HOH A . D 4 HOH 35 635 535 HOH HOH A . D 4 HOH 36 636 536 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 347 ? A CYS 347 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 NA ? B HEM . ? A HEM 501 ? 1_555 118.1 ? 2 SG ? A CYS 347 ? A CYS 347 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 NB ? B HEM . ? A HEM 501 ? 1_555 88.0 ? 3 NA ? B HEM . ? A HEM 501 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 NB ? B HEM . ? A HEM 501 ? 1_555 86.8 ? 4 SG ? A CYS 347 ? A CYS 347 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 NC ? B HEM . ? A HEM 501 ? 1_555 96.1 ? 5 NA ? B HEM . ? A HEM 501 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 NC ? B HEM . ? A HEM 501 ? 1_555 145.5 ? 6 NB ? B HEM . ? A HEM 501 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 NC ? B HEM . ? A HEM 501 ? 1_555 89.9 ? 7 SG ? A CYS 347 ? A CYS 347 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 ND ? B HEM . ? A HEM 501 ? 1_555 111.6 ? 8 NA ? B HEM . ? A HEM 501 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 ND ? B HEM . ? A HEM 501 ? 1_555 83.5 ? 9 NB ? B HEM . ? A HEM 501 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 ND ? B HEM . ? A HEM 501 ? 1_555 160.5 ? 10 NC ? B HEM . ? A HEM 501 ? 1_555 FE ? B HEM . ? A HEM 501 ? 1_555 ND ? B HEM . ? A HEM 501 ? 1_555 88.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-04-17 2 'Structure model' 1 1 2013-11-27 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' entity 6 3 'Structure model' pdbx_entity_nonpoly 7 3 'Structure model' pdbx_initial_refinement_model 8 3 'Structure model' struct_ref_seq_dif 9 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 3 'Structure model' '_struct_ref_seq_dif.details' 7 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 11.2528 _pdbx_refine_tls.origin_y 24.5383 _pdbx_refine_tls.origin_z 17.9473 _pdbx_refine_tls.T[1][1] 0.0779 _pdbx_refine_tls.T[2][2] 0.1908 _pdbx_refine_tls.T[3][3] 0.0462 _pdbx_refine_tls.T[1][2] -0.0087 _pdbx_refine_tls.T[1][3] -0.0003 _pdbx_refine_tls.T[2][3] 0.0163 _pdbx_refine_tls.L[1][1] 4.7688 _pdbx_refine_tls.L[2][2] 1.4214 _pdbx_refine_tls.L[3][3] 4.1456 _pdbx_refine_tls.L[1][2] 0.3654 _pdbx_refine_tls.L[1][3] 2.6227 _pdbx_refine_tls.L[2][3] 0.5316 _pdbx_refine_tls.S[1][1] 0.0198 _pdbx_refine_tls.S[1][2] -0.5803 _pdbx_refine_tls.S[1][3] -0.0278 _pdbx_refine_tls.S[2][1] 0.2973 _pdbx_refine_tls.S[2][2] 0.0210 _pdbx_refine_tls.S[2][3] 0.0805 _pdbx_refine_tls.S[3][1] -0.0239 _pdbx_refine_tls.S[3][2] -0.2321 _pdbx_refine_tls.S[3][3] -0.0408 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 2 ? ? A 100 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 101 ? ? A 239 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 240 ? ? A 403 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 9 ? ? -165.23 110.39 2 1 PHE A 14 ? ? 71.58 34.25 3 1 ASP A 33 ? ? -156.68 63.30 4 1 ASP A 42 ? ? -107.06 44.48 5 1 TYR A 51 ? ? -53.62 -73.59 6 1 GLU A 73 ? ? -25.09 -51.63 7 1 PRO A 85 ? ? -67.59 60.00 8 1 TYR A 141 ? ? -149.55 -60.70 9 1 ALA A 158 ? ? -68.37 0.90 10 1 ASP A 203 ? ? -122.65 -163.91 11 1 ASP A 217 ? ? -158.50 77.73 12 1 GLU A 239 ? ? -59.18 8.60 13 1 THR A 240 ? ? -122.71 -58.06 14 1 ASP A 294 ? ? -33.41 130.79 15 1 SER A 298 ? ? 35.20 37.19 16 1 PRO A 303 ? ? -47.69 160.25 17 1 PHE A 346 ? ? -33.25 130.68 18 1 CYS A 347 ? ? -37.97 120.76 19 1 LEU A 387 ? ? -134.56 -38.46 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LEU 404 ? A LEU 404 3 1 Y 1 A GLU 405 ? A GLU 405 4 1 Y 1 A HIS 406 ? A HIS 406 5 1 Y 1 A HIS 407 ? A HIS 407 6 1 Y 1 A HIS 408 ? A HIS 408 7 1 Y 1 A HIS 409 ? A HIS 409 8 1 Y 1 A HIS 410 ? A HIS 410 9 1 Y 1 A HIS 411 ? A HIS 411 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HEM CHA C N N 137 HEM CHB C N N 138 HEM CHC C N N 139 HEM CHD C N N 140 HEM C1A C Y N 141 HEM C2A C Y N 142 HEM C3A C Y N 143 HEM C4A C Y N 144 HEM CMA C N N 145 HEM CAA C N N 146 HEM CBA C N N 147 HEM CGA C N N 148 HEM O1A O N N 149 HEM O2A O N N 150 HEM C1B C N N 151 HEM C2B C N N 152 HEM C3B C N N 153 HEM C4B C N N 154 HEM CMB C N N 155 HEM CAB C N N 156 HEM CBB C N N 157 HEM C1C C Y N 158 HEM C2C C Y N 159 HEM C3C C Y N 160 HEM C4C C Y N 161 HEM CMC C N N 162 HEM CAC C N N 163 HEM CBC C N N 164 HEM C1D C N N 165 HEM C2D C N N 166 HEM C3D C N N 167 HEM C4D C N N 168 HEM CMD C N N 169 HEM CAD C N N 170 HEM CBD C N N 171 HEM CGD C N N 172 HEM O1D O N N 173 HEM O2D O N N 174 HEM NA N Y N 175 HEM NB N N N 176 HEM NC N Y N 177 HEM ND N N N 178 HEM FE FE N N 179 HEM HHB H N N 180 HEM HHC H N N 181 HEM HHD H N N 182 HEM HMA H N N 183 HEM HMAA H N N 184 HEM HMAB H N N 185 HEM HAA H N N 186 HEM HAAA H N N 187 HEM HBA H N N 188 HEM HBAA H N N 189 HEM HMB H N N 190 HEM HMBA H N N 191 HEM HMBB H N N 192 HEM HAB H N N 193 HEM HBB H N N 194 HEM HBBA H N N 195 HEM HMC H N N 196 HEM HMCA H N N 197 HEM HMCB H N N 198 HEM HAC H N N 199 HEM HBC H N N 200 HEM HBCA H N N 201 HEM HMD H N N 202 HEM HMDA H N N 203 HEM HMDB H N N 204 HEM HAD H N N 205 HEM HADA H N N 206 HEM HBD H N N 207 HEM HBDA H N N 208 HEM H2A H N N 209 HEM H2D H N N 210 HEM HHA H N N 211 HIS N N N N 212 HIS CA C N S 213 HIS C C N N 214 HIS O O N N 215 HIS CB C N N 216 HIS CG C Y N 217 HIS ND1 N Y N 218 HIS CD2 C Y N 219 HIS CE1 C Y N 220 HIS NE2 N Y N 221 HIS OXT O N N 222 HIS H H N N 223 HIS H2 H N N 224 HIS HA H N N 225 HIS HB2 H N N 226 HIS HB3 H N N 227 HIS HD1 H N N 228 HIS HD2 H N N 229 HIS HE1 H N N 230 HIS HE2 H N N 231 HIS HXT H N N 232 HOH O O N N 233 HOH H1 H N N 234 HOH H2 H N N 235 ILE N N N N 236 ILE CA C N S 237 ILE C C N N 238 ILE O O N N 239 ILE CB C N S 240 ILE CG1 C N N 241 ILE CG2 C N N 242 ILE CD1 C N N 243 ILE OXT O N N 244 ILE H H N N 245 ILE H2 H N N 246 ILE HA H N N 247 ILE HB H N N 248 ILE HG12 H N N 249 ILE HG13 H N N 250 ILE HG21 H N N 251 ILE HG22 H N N 252 ILE HG23 H N N 253 ILE HD11 H N N 254 ILE HD12 H N N 255 ILE HD13 H N N 256 ILE HXT H N N 257 LEU N N N N 258 LEU CA C N S 259 LEU C C N N 260 LEU O O N N 261 LEU CB C N N 262 LEU CG C N N 263 LEU CD1 C N N 264 LEU CD2 C N N 265 LEU OXT O N N 266 LEU H H N N 267 LEU H2 H N N 268 LEU HA H N N 269 LEU HB2 H N N 270 LEU HB3 H N N 271 LEU HG H N N 272 LEU HD11 H N N 273 LEU HD12 H N N 274 LEU HD13 H N N 275 LEU HD21 H N N 276 LEU HD22 H N N 277 LEU HD23 H N N 278 LEU HXT H N N 279 LYS N N N N 280 LYS CA C N S 281 LYS C C N N 282 LYS O O N N 283 LYS CB C N N 284 LYS CG C N N 285 LYS CD C N N 286 LYS CE C N N 287 LYS NZ N N N 288 LYS OXT O N N 289 LYS H H N N 290 LYS H2 H N N 291 LYS HA H N N 292 LYS HB2 H N N 293 LYS HB3 H N N 294 LYS HG2 H N N 295 LYS HG3 H N N 296 LYS HD2 H N N 297 LYS HD3 H N N 298 LYS HE2 H N N 299 LYS HE3 H N N 300 LYS HZ1 H N N 301 LYS HZ2 H N N 302 LYS HZ3 H N N 303 LYS HXT H N N 304 MET N N N N 305 MET CA C N S 306 MET C C N N 307 MET O O N N 308 MET CB C N N 309 MET CG C N N 310 MET SD S N N 311 MET CE C N N 312 MET OXT O N N 313 MET H H N N 314 MET H2 H N N 315 MET HA H N N 316 MET HB2 H N N 317 MET HB3 H N N 318 MET HG2 H N N 319 MET HG3 H N N 320 MET HE1 H N N 321 MET HE2 H N N 322 MET HE3 H N N 323 MET HXT H N N 324 PHE N N N N 325 PHE CA C N S 326 PHE C C N N 327 PHE O O N N 328 PHE CB C N N 329 PHE CG C Y N 330 PHE CD1 C Y N 331 PHE CD2 C Y N 332 PHE CE1 C Y N 333 PHE CE2 C Y N 334 PHE CZ C Y N 335 PHE OXT O N N 336 PHE H H N N 337 PHE H2 H N N 338 PHE HA H N N 339 PHE HB2 H N N 340 PHE HB3 H N N 341 PHE HD1 H N N 342 PHE HD2 H N N 343 PHE HE1 H N N 344 PHE HE2 H N N 345 PHE HZ H N N 346 PHE HXT H N N 347 PRO N N N N 348 PRO CA C N S 349 PRO C C N N 350 PRO O O N N 351 PRO CB C N N 352 PRO CG C N N 353 PRO CD C N N 354 PRO OXT O N N 355 PRO H H N N 356 PRO HA H N N 357 PRO HB2 H N N 358 PRO HB3 H N N 359 PRO HG2 H N N 360 PRO HG3 H N N 361 PRO HD2 H N N 362 PRO HD3 H N N 363 PRO HXT H N N 364 SER N N N N 365 SER CA C N S 366 SER C C N N 367 SER O O N N 368 SER CB C N N 369 SER OG O N N 370 SER OXT O N N 371 SER H H N N 372 SER H2 H N N 373 SER HA H N N 374 SER HB2 H N N 375 SER HB3 H N N 376 SER HG H N N 377 SER HXT H N N 378 THR N N N N 379 THR CA C N S 380 THR C C N N 381 THR O O N N 382 THR CB C N R 383 THR OG1 O N N 384 THR CG2 C N N 385 THR OXT O N N 386 THR H H N N 387 THR H2 H N N 388 THR HA H N N 389 THR HB H N N 390 THR HG1 H N N 391 THR HG21 H N N 392 THR HG22 H N N 393 THR HG23 H N N 394 THR HXT H N N 395 TRP N N N N 396 TRP CA C N S 397 TRP C C N N 398 TRP O O N N 399 TRP CB C N N 400 TRP CG C Y N 401 TRP CD1 C Y N 402 TRP CD2 C Y N 403 TRP NE1 N Y N 404 TRP CE2 C Y N 405 TRP CE3 C Y N 406 TRP CZ2 C Y N 407 TRP CZ3 C Y N 408 TRP CH2 C Y N 409 TRP OXT O N N 410 TRP H H N N 411 TRP H2 H N N 412 TRP HA H N N 413 TRP HB2 H N N 414 TRP HB3 H N N 415 TRP HD1 H N N 416 TRP HE1 H N N 417 TRP HE3 H N N 418 TRP HZ2 H N N 419 TRP HZ3 H N N 420 TRP HH2 H N N 421 TRP HXT H N N 422 TYR N N N N 423 TYR CA C N S 424 TYR C C N N 425 TYR O O N N 426 TYR CB C N N 427 TYR CG C Y N 428 TYR CD1 C Y N 429 TYR CD2 C Y N 430 TYR CE1 C Y N 431 TYR CE2 C Y N 432 TYR CZ C Y N 433 TYR OH O N N 434 TYR OXT O N N 435 TYR H H N N 436 TYR H2 H N N 437 TYR HA H N N 438 TYR HB2 H N N 439 TYR HB3 H N N 440 TYR HD1 H N N 441 TYR HD2 H N N 442 TYR HE1 H N N 443 TYR HE2 H N N 444 TYR HH H N N 445 TYR HXT H N N 446 VAL N N N N 447 VAL CA C N S 448 VAL C C N N 449 VAL O O N N 450 VAL CB C N N 451 VAL CG1 C N N 452 VAL CG2 C N N 453 VAL OXT O N N 454 VAL H H N N 455 VAL H2 H N N 456 VAL HA H N N 457 VAL HB H N N 458 VAL HG11 H N N 459 VAL HG12 H N N 460 VAL HG13 H N N 461 VAL HG21 H N N 462 VAL HG22 H N N 463 VAL HG23 H N N 464 VAL HXT H N N 465 VD3 O O N N 466 VD3 C1 C N N 467 VD3 C2 C N N 468 VD3 C3 C N S 469 VD3 C4 C N N 470 VD3 C5 C N N 471 VD3 C7 C N N 472 VD3 C8 C N N 473 VD3 C9 C N N 474 VD3 C10 C N N 475 VD3 C6 C N N 476 VD3 C11 C N N 477 VD3 C12 C N N 478 VD3 C13 C N R 479 VD3 C14 C N S 480 VD3 C15 C N N 481 VD3 C16 C N N 482 VD3 C17 C N R 483 VD3 C18 C N N 484 VD3 C19 C N N 485 VD3 C20 C N R 486 VD3 C21 C N N 487 VD3 C22 C N N 488 VD3 C23 C N N 489 VD3 C24 C N N 490 VD3 C25 C N N 491 VD3 C26 C N N 492 VD3 C27 C N N 493 VD3 HO H N N 494 VD3 H11 H N N 495 VD3 H12 H N N 496 VD3 H21 H N N 497 VD3 H22 H N N 498 VD3 H3 H N N 499 VD3 H41 H N N 500 VD3 H42 H N N 501 VD3 H7 H N N 502 VD3 H8 H N N 503 VD3 H101 H N N 504 VD3 H102 H N N 505 VD3 H111 H N N 506 VD3 H112 H N N 507 VD3 H121 H N N 508 VD3 H122 H N N 509 VD3 H14 H N N 510 VD3 H151 H N N 511 VD3 H152 H N N 512 VD3 H161 H N N 513 VD3 H162 H N N 514 VD3 H17 H N N 515 VD3 H181 H N N 516 VD3 H182 H N N 517 VD3 H183 H N N 518 VD3 H191 H N N 519 VD3 H192 H N N 520 VD3 H20 H N N 521 VD3 H211 H N N 522 VD3 H212 H N N 523 VD3 H213 H N N 524 VD3 H221 H N N 525 VD3 H222 H N N 526 VD3 H231 H N N 527 VD3 H232 H N N 528 VD3 H241 H N N 529 VD3 H242 H N N 530 VD3 H25 H N N 531 VD3 H261 H N N 532 VD3 H262 H N N 533 VD3 H263 H N N 534 VD3 H271 H N N 535 VD3 H272 H N N 536 VD3 H273 H N N 537 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HEM CHA C1A sing N N 129 HEM CHA C4D doub N N 130 HEM CHA HHA sing N N 131 HEM CHB C4A sing N N 132 HEM CHB C1B doub N N 133 HEM CHB HHB sing N N 134 HEM CHC C4B sing N N 135 HEM CHC C1C doub N N 136 HEM CHC HHC sing N N 137 HEM CHD C4C doub N N 138 HEM CHD C1D sing N N 139 HEM CHD HHD sing N N 140 HEM C1A C2A doub Y N 141 HEM C1A NA sing Y N 142 HEM C2A C3A sing Y N 143 HEM C2A CAA sing N N 144 HEM C3A C4A doub Y N 145 HEM C3A CMA sing N N 146 HEM C4A NA sing Y N 147 HEM CMA HMA sing N N 148 HEM CMA HMAA sing N N 149 HEM CMA HMAB sing N N 150 HEM CAA CBA sing N N 151 HEM CAA HAA sing N N 152 HEM CAA HAAA sing N N 153 HEM CBA CGA sing N N 154 HEM CBA HBA sing N N 155 HEM CBA HBAA sing N N 156 HEM CGA O1A doub N N 157 HEM CGA O2A sing N N 158 HEM C1B C2B sing N N 159 HEM C1B NB sing N N 160 HEM C2B C3B doub N N 161 HEM C2B CMB sing N N 162 HEM C3B C4B sing N N 163 HEM C3B CAB sing N N 164 HEM C4B NB doub N N 165 HEM CMB HMB sing N N 166 HEM CMB HMBA sing N N 167 HEM CMB HMBB sing N N 168 HEM CAB CBB doub N N 169 HEM CAB HAB sing N N 170 HEM CBB HBB sing N N 171 HEM CBB HBBA sing N N 172 HEM C1C C2C sing Y N 173 HEM C1C NC sing Y N 174 HEM C2C C3C doub Y N 175 HEM C2C CMC sing N N 176 HEM C3C C4C sing Y N 177 HEM C3C CAC sing N N 178 HEM C4C NC sing Y N 179 HEM CMC HMC sing N N 180 HEM CMC HMCA sing N N 181 HEM CMC HMCB sing N N 182 HEM CAC CBC doub N N 183 HEM CAC HAC sing N N 184 HEM CBC HBC sing N N 185 HEM CBC HBCA sing N N 186 HEM C1D C2D sing N N 187 HEM C1D ND doub N N 188 HEM C2D C3D doub N N 189 HEM C2D CMD sing N N 190 HEM C3D C4D sing N N 191 HEM C3D CAD sing N N 192 HEM C4D ND sing N N 193 HEM CMD HMD sing N N 194 HEM CMD HMDA sing N N 195 HEM CMD HMDB sing N N 196 HEM CAD CBD sing N N 197 HEM CAD HAD sing N N 198 HEM CAD HADA sing N N 199 HEM CBD CGD sing N N 200 HEM CBD HBD sing N N 201 HEM CBD HBDA sing N N 202 HEM CGD O1D doub N N 203 HEM CGD O2D sing N N 204 HEM O2A H2A sing N N 205 HEM O2D H2D sing N N 206 HEM FE NA sing N N 207 HEM FE NB sing N N 208 HEM FE NC sing N N 209 HEM FE ND sing N N 210 HIS N CA sing N N 211 HIS N H sing N N 212 HIS N H2 sing N N 213 HIS CA C sing N N 214 HIS CA CB sing N N 215 HIS CA HA sing N N 216 HIS C O doub N N 217 HIS C OXT sing N N 218 HIS CB CG sing N N 219 HIS CB HB2 sing N N 220 HIS CB HB3 sing N N 221 HIS CG ND1 sing Y N 222 HIS CG CD2 doub Y N 223 HIS ND1 CE1 doub Y N 224 HIS ND1 HD1 sing N N 225 HIS CD2 NE2 sing Y N 226 HIS CD2 HD2 sing N N 227 HIS CE1 NE2 sing Y N 228 HIS CE1 HE1 sing N N 229 HIS NE2 HE2 sing N N 230 HIS OXT HXT sing N N 231 HOH O H1 sing N N 232 HOH O H2 sing N N 233 ILE N CA sing N N 234 ILE N H sing N N 235 ILE N H2 sing N N 236 ILE CA C sing N N 237 ILE CA CB sing N N 238 ILE CA HA sing N N 239 ILE C O doub N N 240 ILE C OXT sing N N 241 ILE CB CG1 sing N N 242 ILE CB CG2 sing N N 243 ILE CB HB sing N N 244 ILE CG1 CD1 sing N N 245 ILE CG1 HG12 sing N N 246 ILE CG1 HG13 sing N N 247 ILE CG2 HG21 sing N N 248 ILE CG2 HG22 sing N N 249 ILE CG2 HG23 sing N N 250 ILE CD1 HD11 sing N N 251 ILE CD1 HD12 sing N N 252 ILE CD1 HD13 sing N N 253 ILE OXT HXT sing N N 254 LEU N CA sing N N 255 LEU N H sing N N 256 LEU N H2 sing N N 257 LEU CA C sing N N 258 LEU CA CB sing N N 259 LEU CA HA sing N N 260 LEU C O doub N N 261 LEU C OXT sing N N 262 LEU CB CG sing N N 263 LEU CB HB2 sing N N 264 LEU CB HB3 sing N N 265 LEU CG CD1 sing N N 266 LEU CG CD2 sing N N 267 LEU CG HG sing N N 268 LEU CD1 HD11 sing N N 269 LEU CD1 HD12 sing N N 270 LEU CD1 HD13 sing N N 271 LEU CD2 HD21 sing N N 272 LEU CD2 HD22 sing N N 273 LEU CD2 HD23 sing N N 274 LEU OXT HXT sing N N 275 LYS N CA sing N N 276 LYS N H sing N N 277 LYS N H2 sing N N 278 LYS CA C sing N N 279 LYS CA CB sing N N 280 LYS CA HA sing N N 281 LYS C O doub N N 282 LYS C OXT sing N N 283 LYS CB CG sing N N 284 LYS CB HB2 sing N N 285 LYS CB HB3 sing N N 286 LYS CG CD sing N N 287 LYS CG HG2 sing N N 288 LYS CG HG3 sing N N 289 LYS CD CE sing N N 290 LYS CD HD2 sing N N 291 LYS CD HD3 sing N N 292 LYS CE NZ sing N N 293 LYS CE HE2 sing N N 294 LYS CE HE3 sing N N 295 LYS NZ HZ1 sing N N 296 LYS NZ HZ2 sing N N 297 LYS NZ HZ3 sing N N 298 LYS OXT HXT sing N N 299 MET N CA sing N N 300 MET N H sing N N 301 MET N H2 sing N N 302 MET CA C sing N N 303 MET CA CB sing N N 304 MET CA HA sing N N 305 MET C O doub N N 306 MET C OXT sing N N 307 MET CB CG sing N N 308 MET CB HB2 sing N N 309 MET CB HB3 sing N N 310 MET CG SD sing N N 311 MET CG HG2 sing N N 312 MET CG HG3 sing N N 313 MET SD CE sing N N 314 MET CE HE1 sing N N 315 MET CE HE2 sing N N 316 MET CE HE3 sing N N 317 MET OXT HXT sing N N 318 PHE N CA sing N N 319 PHE N H sing N N 320 PHE N H2 sing N N 321 PHE CA C sing N N 322 PHE CA CB sing N N 323 PHE CA HA sing N N 324 PHE C O doub N N 325 PHE C OXT sing N N 326 PHE CB CG sing N N 327 PHE CB HB2 sing N N 328 PHE CB HB3 sing N N 329 PHE CG CD1 doub Y N 330 PHE CG CD2 sing Y N 331 PHE CD1 CE1 sing Y N 332 PHE CD1 HD1 sing N N 333 PHE CD2 CE2 doub Y N 334 PHE CD2 HD2 sing N N 335 PHE CE1 CZ doub Y N 336 PHE CE1 HE1 sing N N 337 PHE CE2 CZ sing Y N 338 PHE CE2 HE2 sing N N 339 PHE CZ HZ sing N N 340 PHE OXT HXT sing N N 341 PRO N CA sing N N 342 PRO N CD sing N N 343 PRO N H sing N N 344 PRO CA C sing N N 345 PRO CA CB sing N N 346 PRO CA HA sing N N 347 PRO C O doub N N 348 PRO C OXT sing N N 349 PRO CB CG sing N N 350 PRO CB HB2 sing N N 351 PRO CB HB3 sing N N 352 PRO CG CD sing N N 353 PRO CG HG2 sing N N 354 PRO CG HG3 sing N N 355 PRO CD HD2 sing N N 356 PRO CD HD3 sing N N 357 PRO OXT HXT sing N N 358 SER N CA sing N N 359 SER N H sing N N 360 SER N H2 sing N N 361 SER CA C sing N N 362 SER CA CB sing N N 363 SER CA HA sing N N 364 SER C O doub N N 365 SER C OXT sing N N 366 SER CB OG sing N N 367 SER CB HB2 sing N N 368 SER CB HB3 sing N N 369 SER OG HG sing N N 370 SER OXT HXT sing N N 371 THR N CA sing N N 372 THR N H sing N N 373 THR N H2 sing N N 374 THR CA C sing N N 375 THR CA CB sing N N 376 THR CA HA sing N N 377 THR C O doub N N 378 THR C OXT sing N N 379 THR CB OG1 sing N N 380 THR CB CG2 sing N N 381 THR CB HB sing N N 382 THR OG1 HG1 sing N N 383 THR CG2 HG21 sing N N 384 THR CG2 HG22 sing N N 385 THR CG2 HG23 sing N N 386 THR OXT HXT sing N N 387 TRP N CA sing N N 388 TRP N H sing N N 389 TRP N H2 sing N N 390 TRP CA C sing N N 391 TRP CA CB sing N N 392 TRP CA HA sing N N 393 TRP C O doub N N 394 TRP C OXT sing N N 395 TRP CB CG sing N N 396 TRP CB HB2 sing N N 397 TRP CB HB3 sing N N 398 TRP CG CD1 doub Y N 399 TRP CG CD2 sing Y N 400 TRP CD1 NE1 sing Y N 401 TRP CD1 HD1 sing N N 402 TRP CD2 CE2 doub Y N 403 TRP CD2 CE3 sing Y N 404 TRP NE1 CE2 sing Y N 405 TRP NE1 HE1 sing N N 406 TRP CE2 CZ2 sing Y N 407 TRP CE3 CZ3 doub Y N 408 TRP CE3 HE3 sing N N 409 TRP CZ2 CH2 doub Y N 410 TRP CZ2 HZ2 sing N N 411 TRP CZ3 CH2 sing Y N 412 TRP CZ3 HZ3 sing N N 413 TRP CH2 HH2 sing N N 414 TRP OXT HXT sing N N 415 TYR N CA sing N N 416 TYR N H sing N N 417 TYR N H2 sing N N 418 TYR CA C sing N N 419 TYR CA CB sing N N 420 TYR CA HA sing N N 421 TYR C O doub N N 422 TYR C OXT sing N N 423 TYR CB CG sing N N 424 TYR CB HB2 sing N N 425 TYR CB HB3 sing N N 426 TYR CG CD1 doub Y N 427 TYR CG CD2 sing Y N 428 TYR CD1 CE1 sing Y N 429 TYR CD1 HD1 sing N N 430 TYR CD2 CE2 doub Y N 431 TYR CD2 HD2 sing N N 432 TYR CE1 CZ doub Y N 433 TYR CE1 HE1 sing N N 434 TYR CE2 CZ sing Y N 435 TYR CE2 HE2 sing N N 436 TYR CZ OH sing N N 437 TYR OH HH sing N N 438 TYR OXT HXT sing N N 439 VAL N CA sing N N 440 VAL N H sing N N 441 VAL N H2 sing N N 442 VAL CA C sing N N 443 VAL CA CB sing N N 444 VAL CA HA sing N N 445 VAL C O doub N N 446 VAL C OXT sing N N 447 VAL CB CG1 sing N N 448 VAL CB CG2 sing N N 449 VAL CB HB sing N N 450 VAL CG1 HG11 sing N N 451 VAL CG1 HG12 sing N N 452 VAL CG1 HG13 sing N N 453 VAL CG2 HG21 sing N N 454 VAL CG2 HG22 sing N N 455 VAL CG2 HG23 sing N N 456 VAL OXT HXT sing N N 457 VD3 O C3 sing N N 458 VD3 O HO sing N N 459 VD3 C1 C2 sing N N 460 VD3 C1 C6 sing N N 461 VD3 C1 H11 sing N N 462 VD3 C1 H12 sing N N 463 VD3 C2 C3 sing N N 464 VD3 C2 H21 sing N N 465 VD3 C2 H22 sing N N 466 VD3 C3 C4 sing N N 467 VD3 C3 H3 sing N N 468 VD3 C4 C5 sing N N 469 VD3 C4 H41 sing N N 470 VD3 C4 H42 sing N N 471 VD3 C5 C7 doub N E 472 VD3 C5 C6 sing N N 473 VD3 C7 C8 sing N N 474 VD3 C7 H7 sing N N 475 VD3 C8 C9 doub N Z 476 VD3 C8 H8 sing N N 477 VD3 C9 C10 sing N N 478 VD3 C9 C14 sing N N 479 VD3 C10 C11 sing N N 480 VD3 C10 H101 sing N N 481 VD3 C10 H102 sing N N 482 VD3 C6 C19 doub N N 483 VD3 C11 C12 sing N N 484 VD3 C11 H111 sing N N 485 VD3 C11 H112 sing N N 486 VD3 C12 C13 sing N N 487 VD3 C12 H121 sing N N 488 VD3 C12 H122 sing N N 489 VD3 C13 C14 sing N N 490 VD3 C13 C17 sing N N 491 VD3 C13 C18 sing N N 492 VD3 C14 C15 sing N N 493 VD3 C14 H14 sing N N 494 VD3 C15 C16 sing N N 495 VD3 C15 H151 sing N N 496 VD3 C15 H152 sing N N 497 VD3 C16 C17 sing N N 498 VD3 C16 H161 sing N N 499 VD3 C16 H162 sing N N 500 VD3 C17 C20 sing N N 501 VD3 C17 H17 sing N N 502 VD3 C18 H181 sing N N 503 VD3 C18 H182 sing N N 504 VD3 C18 H183 sing N N 505 VD3 C19 H191 sing N N 506 VD3 C19 H192 sing N N 507 VD3 C20 C21 sing N N 508 VD3 C20 C22 sing N N 509 VD3 C20 H20 sing N N 510 VD3 C21 H211 sing N N 511 VD3 C21 H212 sing N N 512 VD3 C21 H213 sing N N 513 VD3 C22 C23 sing N N 514 VD3 C22 H221 sing N N 515 VD3 C22 H222 sing N N 516 VD3 C23 C24 sing N N 517 VD3 C23 H231 sing N N 518 VD3 C23 H232 sing N N 519 VD3 C24 C25 sing N N 520 VD3 C24 H241 sing N N 521 VD3 C24 H242 sing N N 522 VD3 C25 C26 sing N N 523 VD3 C25 C27 sing N N 524 VD3 C25 H25 sing N N 525 VD3 C26 H261 sing N N 526 VD3 C26 H262 sing N N 527 VD3 C26 H263 sing N N 528 VD3 C27 H271 sing N N 529 VD3 C27 H272 sing N N 530 VD3 C27 H273 sing N N 531 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 ;(1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6-METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4-YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL ; VD3 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3A50 _pdbx_initial_refinement_model.details 'PDB ENTRY 3A50' #