data_3VTT # _entry.id 3VTT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3VTT RCSB RCSB095491 WWPDB D_1000095491 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VTT _pdbx_database_status.recvd_initial_deposition_date 2012-06-07 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Elahi, M.' 1 'Islam, M.M.' 2 'Kuroda, Y.' 3 # _citation.id primary _citation.title ;High resolution crystal structure of dengue-3 envelope protein domain III suggests possible molecular mechanisms for serospecific antibody recognition ; _citation.journal_abbrev Proteins _citation.journal_volume 81 _citation.page_first 1090 _citation.page_last 1095 _citation.year 2013 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23239402 _citation.pdbx_database_id_DOI 10.1002/prot.24237 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Elahi, M.' 1 primary 'Islam, M.M.' 2 primary 'Noguchi, K.' 3 primary 'Yohda, M.' 4 primary 'Kuroda, Y.' 5 # _cell.entry_id 3VTT _cell.length_a 51.03 _cell.length_b 37.68 _cell.length_c 52.54 _cell.angle_alpha 90.00 _cell.angle_beta 105.03 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VTT _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Envelope protein E' 11623.287 2 ? ? 'UNP residues 574-678' ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 water nat water 18.015 146 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSGMSYAMCLNTFVLKKEVSETQHGTILIKVEYKGEDAPCKIPFSTEDGQGKAHNGRLITANPVVTKKEEPVNIEAEPPF GESNIVIGIGDKALKINWYRKGSSIGK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSGMSYAMCLNTFVLKKEVSETQHGTILIKVEYKGEDAPCKIPFSTEDGQGKAHNGRLITANPVVTKKEEPVNIEAEPPF GESNIVIGIGDKALKINWYRKGSSIGK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLY n 1 4 MET n 1 5 SER n 1 6 TYR n 1 7 ALA n 1 8 MET n 1 9 CYS n 1 10 LEU n 1 11 ASN n 1 12 THR n 1 13 PHE n 1 14 VAL n 1 15 LEU n 1 16 LYS n 1 17 LYS n 1 18 GLU n 1 19 VAL n 1 20 SER n 1 21 GLU n 1 22 THR n 1 23 GLN n 1 24 HIS n 1 25 GLY n 1 26 THR n 1 27 ILE n 1 28 LEU n 1 29 ILE n 1 30 LYS n 1 31 VAL n 1 32 GLU n 1 33 TYR n 1 34 LYS n 1 35 GLY n 1 36 GLU n 1 37 ASP n 1 38 ALA n 1 39 PRO n 1 40 CYS n 1 41 LYS n 1 42 ILE n 1 43 PRO n 1 44 PHE n 1 45 SER n 1 46 THR n 1 47 GLU n 1 48 ASP n 1 49 GLY n 1 50 GLN n 1 51 GLY n 1 52 LYS n 1 53 ALA n 1 54 HIS n 1 55 ASN n 1 56 GLY n 1 57 ARG n 1 58 LEU n 1 59 ILE n 1 60 THR n 1 61 ALA n 1 62 ASN n 1 63 PRO n 1 64 VAL n 1 65 VAL n 1 66 THR n 1 67 LYS n 1 68 LYS n 1 69 GLU n 1 70 GLU n 1 71 PRO n 1 72 VAL n 1 73 ASN n 1 74 ILE n 1 75 GLU n 1 76 ALA n 1 77 GLU n 1 78 PRO n 1 79 PRO n 1 80 PHE n 1 81 GLY n 1 82 GLU n 1 83 SER n 1 84 ASN n 1 85 ILE n 1 86 VAL n 1 87 ILE n 1 88 GLY n 1 89 ILE n 1 90 GLY n 1 91 ASP n 1 92 LYS n 1 93 ALA n 1 94 LEU n 1 95 LYS n 1 96 ILE n 1 97 ASN n 1 98 TRP n 1 99 TYR n 1 100 ARG n 1 101 LYS n 1 102 GLY n 1 103 SER n 1 104 SER n 1 105 ILE n 1 106 GLY n 1 107 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name DENV-3 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Philippines/H87/1956 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Dengue virus type 3' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 408870 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'JM109 DE3PlysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLG_DEN3P _struct_ref.pdbx_db_accession P27915 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GMSYAMCLNTFVLKKEVSETQHGTILIKVEYKGEDAPCKIPFSTEDGQGKAHNGRLITANPVVTKKEEPVNIEAEPPFGE SNIVIGIGDKALKINWYRKGSSIGK ; _struct_ref.pdbx_align_begin 574 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VTT A 3 ? 107 ? P27915 574 ? 678 ? 574 678 2 1 3VTT B 3 ? 107 ? P27915 574 ? 678 ? 574 678 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3VTT GLY A 1 ? UNP P27915 ? ? 'EXPRESSION TAG' 572 1 1 3VTT SER A 2 ? UNP P27915 ? ? 'EXPRESSION TAG' 573 2 2 3VTT GLY B 1 ? UNP P27915 ? ? 'EXPRESSION TAG' 572 3 2 3VTT SER B 2 ? UNP P27915 ? ? 'EXPRESSION TAG' 573 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3VTT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_percent_sol 41.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '30% PEG 4000, 0.2M Lithium sulfate, 0.1M Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.pdbx_collection_date 2012-05-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-1A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-1A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1 # _reflns.entry_id 3VTT _reflns.observed_criterion_sigma_I 1.37 _reflns.observed_criterion_sigma_F 1.37 _reflns.d_resolution_low 30.255 _reflns.d_resolution_high 1.7 _reflns.number_obs 21522 _reflns.number_all 21277 _reflns.percent_possible_obs 99 _reflns.pdbx_Rmerge_I_obs 0.038 _reflns.pdbx_Rsym_value 0.034 _reflns.pdbx_netI_over_sigmaI 2.31 _reflns.B_iso_Wilson_estimate 23.64 _reflns.pdbx_redundancy 2.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3VTT _refine.ls_number_reflns_obs 21261 _refine.ls_number_reflns_all 21522 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.255 _refine.ls_d_res_high 1.700 _refine.ls_percent_reflns_obs 99.01 _refine.ls_R_factor_obs 0.2083 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2057 _refine.ls_R_factor_R_free 0.2554 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.14 _refine.ls_number_reflns_R_free 1092 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 33.1108 _refine.aniso_B[1][1] -0.1565 _refine.aniso_B[2][2] 0.4109 _refine.aniso_B[3][3] -0.2544 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.1208 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.356 _refine.solvent_model_param_bsol 36.257 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.83 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.39 _refine.overall_FOM_work_R_set 0.8328 _refine.B_iso_max 85.880 _refine.B_iso_min 10.530 _refine.pdbx_overall_phase_error 24.1400 _refine.occupancy_max 1.000 _refine.occupancy_min 0.450 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1559 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 146 _refine_hist.number_atoms_total 1715 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 30.255 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 1611 ? 'X-RAY DIFFRACTION' f_angle_d 1.145 ? ? 2176 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 13.998 ? ? 608 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.077 ? ? 242 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 279 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 1.7002 1.7776 8 98.0000 2438 . 0.2845 0.3591 . 140 . 2578 . 'X-RAY DIFFRACTION' . 1.7776 1.8713 8 100.0000 2534 . 0.2393 0.2864 . 134 . 2668 . 'X-RAY DIFFRACTION' . 1.8713 1.9886 8 99.0000 2512 . 0.2190 0.2825 . 127 . 2639 . 'X-RAY DIFFRACTION' . 1.9886 2.1421 8 100.0000 2518 . 0.2148 0.2476 . 137 . 2655 . 'X-RAY DIFFRACTION' . 2.1421 2.3575 8 99.0000 2535 . 0.2133 0.2710 . 141 . 2676 . 'X-RAY DIFFRACTION' . 2.3575 2.6985 8 99.0000 2529 . 0.2147 0.2718 . 128 . 2657 . 'X-RAY DIFFRACTION' . 2.6985 3.3991 8 99.0000 2535 . 0.2047 0.2328 . 146 . 2681 . 'X-RAY DIFFRACTION' . 3.3991 30.2597 8 98.0000 2568 . 0.1844 0.2414 . 139 . 2707 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3VTT _struct.title 'High Resolution crystal structure of Dengue 3 Envelope protein domain III (ED3)' _struct.pdbx_descriptor 'Envelope protein E' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VTT _struct_keywords.pdbx_keywords 'VIRAL PROTEIN, STRUCTURAL PROTEIN' _struct_keywords.text 'immunoglobin like domain, Epitope presentation, cellular attachment, VIRAL PROTEIN, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details 'THE BIOLOGICAL ASSEMBLY OF THE DOMAIN IS TO BE INVESTIGATED.' # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 40 SG ? ? A CYS 580 A CYS 611 1_555 ? ? ? ? ? ? ? 2.022 ? disulf2 disulf ? ? B CYS 9 SG ? ? ? 1_555 B CYS 40 SG ? ? B CYS 580 B CYS 611 1_555 ? ? ? ? ? ? ? 2.023 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 38 A . ? ALA 609 A PRO 39 A ? PRO 610 A 1 0.01 2 ALA 38 B . ? ALA 609 B PRO 39 B ? PRO 610 B 1 -2.57 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? C ? 2 ? D ? 3 ? E ? 3 ? F ? 4 ? G ? 2 ? H ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 13 ? LEU A 15 ? PHE A 584 LEU A 586 A 2 ILE A 27 ? TYR A 33 ? ILE A 598 TYR A 604 A 3 SER A 20 ? GLU A 21 ? SER A 591 GLU A 592 B 1 PHE A 13 ? LEU A 15 ? PHE A 584 LEU A 586 B 2 ILE A 27 ? TYR A 33 ? ILE A 598 TYR A 604 B 3 VAL A 72 ? GLU A 77 ? VAL A 643 GLU A 648 B 4 ARG A 57 ? LEU A 58 ? ARG A 628 LEU A 629 C 1 CYS A 40 ? LYS A 41 ? CYS A 611 LYS A 612 C 2 VAL A 64 ? VAL A 65 ? VAL A 635 VAL A 636 D 1 PHE A 44 ? GLU A 47 ? PHE A 615 GLU A 618 D 2 GLY A 81 ? ILE A 87 ? GLY A 652 ILE A 658 D 3 LEU A 94 ? ARG A 100 ? LEU A 665 ARG A 671 E 1 PHE B 13 ? LEU B 15 ? PHE B 584 LEU B 586 E 2 ILE B 27 ? TYR B 33 ? ILE B 598 TYR B 604 E 3 SER B 20 ? GLU B 21 ? SER B 591 GLU B 592 F 1 PHE B 13 ? LEU B 15 ? PHE B 584 LEU B 586 F 2 ILE B 27 ? TYR B 33 ? ILE B 598 TYR B 604 F 3 VAL B 72 ? GLU B 77 ? VAL B 643 GLU B 648 F 4 ARG B 57 ? LEU B 58 ? ARG B 628 LEU B 629 G 1 CYS B 40 ? LYS B 41 ? CYS B 611 LYS B 612 G 2 VAL B 64 ? VAL B 65 ? VAL B 635 VAL B 636 H 1 PHE B 44 ? GLU B 47 ? PHE B 615 GLU B 618 H 2 GLY B 81 ? ILE B 87 ? GLY B 652 ILE B 658 H 3 LEU B 94 ? ARG B 100 ? LEU B 665 ARG B 671 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 14 ? N VAL A 585 O GLU A 32 ? O GLU A 603 A 2 3 O LEU A 28 ? O LEU A 599 N SER A 20 ? N SER A 591 B 1 2 N VAL A 14 ? N VAL A 585 O GLU A 32 ? O GLU A 603 B 2 3 N ILE A 29 ? N ILE A 600 O ILE A 74 ? O ILE A 645 B 3 4 O GLU A 77 ? O GLU A 648 N ARG A 57 ? N ARG A 628 C 1 2 N CYS A 40 ? N CYS A 611 O VAL A 65 ? O VAL A 636 D 1 2 N SER A 45 ? N SER A 616 O VAL A 86 ? O VAL A 657 D 2 3 N ILE A 85 ? N ILE A 656 O ILE A 96 ? O ILE A 667 E 1 2 N VAL B 14 ? N VAL B 585 O GLU B 32 ? O GLU B 603 E 2 3 O LEU B 28 ? O LEU B 599 N SER B 20 ? N SER B 591 F 1 2 N VAL B 14 ? N VAL B 585 O GLU B 32 ? O GLU B 603 F 2 3 N ILE B 29 ? N ILE B 600 O ILE B 74 ? O ILE B 645 F 3 4 O GLU B 77 ? O GLU B 648 N ARG B 57 ? N ARG B 628 G 1 2 N CYS B 40 ? N CYS B 611 O VAL B 65 ? O VAL B 636 H 1 2 N SER B 45 ? N SER B 616 O VAL B 86 ? O VAL B 657 H 2 3 N GLY B 81 ? N GLY B 652 O ARG B 100 ? O ARG B 671 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 A 701' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 B 701' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 PHE A 80 ? PHE A 651 . ? 1_555 ? 2 AC1 5 GLY A 102 ? GLY A 673 . ? 1_555 ? 3 AC1 5 SER A 103 ? SER A 674 . ? 1_555 ? 4 AC1 5 HOH E . ? HOH A 807 . ? 1_555 ? 5 AC1 5 LYS B 107 ? LYS B 678 . ? 1_545 ? 6 AC2 6 SER A 104 ? SER A 675 . ? 1_565 ? 7 AC2 6 LYS B 101 ? LYS B 672 . ? 1_555 ? 8 AC2 6 SER B 104 ? SER B 675 . ? 1_555 ? 9 AC2 6 ILE B 105 ? ILE B 676 . ? 1_555 ? 10 AC2 6 GLY B 106 ? GLY B 677 . ? 1_555 ? 11 AC2 6 HOH F . ? HOH B 854 . ? 1_555 ? # _database_PDB_matrix.entry_id 3VTT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3VTT _atom_sites.fract_transf_matrix[1][1] 0.019596 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005260 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026537 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019704 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 572 ? ? ? A . n A 1 2 SER 2 573 ? ? ? A . n A 1 3 GLY 3 574 ? ? ? A . n A 1 4 MET 4 575 ? ? ? A . n A 1 5 SER 5 576 576 SER SER A . n A 1 6 TYR 6 577 577 TYR TYR A . n A 1 7 ALA 7 578 578 ALA ALA A . n A 1 8 MET 8 579 579 MET MET A . n A 1 9 CYS 9 580 580 CYS CYS A . n A 1 10 LEU 10 581 581 LEU LEU A . n A 1 11 ASN 11 582 582 ASN ASN A . n A 1 12 THR 12 583 583 THR THR A . n A 1 13 PHE 13 584 584 PHE PHE A . n A 1 14 VAL 14 585 585 VAL VAL A . n A 1 15 LEU 15 586 586 LEU LEU A . n A 1 16 LYS 16 587 587 LYS LYS A . n A 1 17 LYS 17 588 588 LYS LYS A . n A 1 18 GLU 18 589 589 GLU GLU A . n A 1 19 VAL 19 590 590 VAL VAL A . n A 1 20 SER 20 591 591 SER SER A . n A 1 21 GLU 21 592 592 GLU GLU A . n A 1 22 THR 22 593 593 THR THR A . n A 1 23 GLN 23 594 594 GLN GLN A . n A 1 24 HIS 24 595 595 HIS HIS A . n A 1 25 GLY 25 596 596 GLY GLY A . n A 1 26 THR 26 597 597 THR THR A . n A 1 27 ILE 27 598 598 ILE ILE A . n A 1 28 LEU 28 599 599 LEU LEU A . n A 1 29 ILE 29 600 600 ILE ILE A . n A 1 30 LYS 30 601 601 LYS LYS A . n A 1 31 VAL 31 602 602 VAL VAL A . n A 1 32 GLU 32 603 603 GLU GLU A . n A 1 33 TYR 33 604 604 TYR TYR A . n A 1 34 LYS 34 605 605 LYS LYS A . n A 1 35 GLY 35 606 606 GLY GLY A . n A 1 36 GLU 36 607 607 GLU GLU A . n A 1 37 ASP 37 608 608 ASP ASP A . n A 1 38 ALA 38 609 609 ALA ALA A . n A 1 39 PRO 39 610 610 PRO PRO A . n A 1 40 CYS 40 611 611 CYS CYS A . n A 1 41 LYS 41 612 612 LYS LYS A . n A 1 42 ILE 42 613 613 ILE ILE A . n A 1 43 PRO 43 614 614 PRO PRO A . n A 1 44 PHE 44 615 615 PHE PHE A . n A 1 45 SER 45 616 616 SER SER A . n A 1 46 THR 46 617 617 THR THR A . n A 1 47 GLU 47 618 618 GLU GLU A . n A 1 48 ASP 48 619 619 ASP ASP A . n A 1 49 GLY 49 620 620 GLY GLY A . n A 1 50 GLN 50 621 621 GLN GLN A . n A 1 51 GLY 51 622 622 GLY GLY A . n A 1 52 LYS 52 623 623 LYS LYS A . n A 1 53 ALA 53 624 624 ALA ALA A . n A 1 54 HIS 54 625 625 HIS HIS A . n A 1 55 ASN 55 626 626 ASN ASN A . n A 1 56 GLY 56 627 627 GLY GLY A . n A 1 57 ARG 57 628 628 ARG ARG A . n A 1 58 LEU 58 629 629 LEU LEU A . n A 1 59 ILE 59 630 630 ILE ILE A . n A 1 60 THR 60 631 631 THR THR A . n A 1 61 ALA 61 632 632 ALA ALA A . n A 1 62 ASN 62 633 633 ASN ASN A . n A 1 63 PRO 63 634 634 PRO PRO A . n A 1 64 VAL 64 635 635 VAL VAL A . n A 1 65 VAL 65 636 636 VAL VAL A . n A 1 66 THR 66 637 637 THR THR A . n A 1 67 LYS 67 638 638 LYS LYS A . n A 1 68 LYS 68 639 639 LYS LYS A . n A 1 69 GLU 69 640 640 GLU GLU A . n A 1 70 GLU 70 641 641 GLU GLU A . n A 1 71 PRO 71 642 642 PRO PRO A . n A 1 72 VAL 72 643 643 VAL VAL A . n A 1 73 ASN 73 644 644 ASN ASN A . n A 1 74 ILE 74 645 645 ILE ILE A . n A 1 75 GLU 75 646 646 GLU GLU A . n A 1 76 ALA 76 647 647 ALA ALA A . n A 1 77 GLU 77 648 648 GLU GLU A . n A 1 78 PRO 78 649 649 PRO PRO A . n A 1 79 PRO 79 650 650 PRO PRO A . n A 1 80 PHE 80 651 651 PHE PHE A . n A 1 81 GLY 81 652 652 GLY GLY A . n A 1 82 GLU 82 653 653 GLU GLU A . n A 1 83 SER 83 654 654 SER SER A . n A 1 84 ASN 84 655 655 ASN ASN A . n A 1 85 ILE 85 656 656 ILE ILE A . n A 1 86 VAL 86 657 657 VAL VAL A . n A 1 87 ILE 87 658 658 ILE ILE A . n A 1 88 GLY 88 659 659 GLY GLY A . n A 1 89 ILE 89 660 660 ILE ILE A . n A 1 90 GLY 90 661 661 GLY GLY A . n A 1 91 ASP 91 662 662 ASP ASP A . n A 1 92 LYS 92 663 663 LYS LYS A . n A 1 93 ALA 93 664 664 ALA ALA A . n A 1 94 LEU 94 665 665 LEU LEU A . n A 1 95 LYS 95 666 666 LYS LYS A . n A 1 96 ILE 96 667 667 ILE ILE A . n A 1 97 ASN 97 668 668 ASN ASN A . n A 1 98 TRP 98 669 669 TRP TRP A . n A 1 99 TYR 99 670 670 TYR TYR A . n A 1 100 ARG 100 671 671 ARG ARG A . n A 1 101 LYS 101 672 672 LYS LYS A . n A 1 102 GLY 102 673 673 GLY GLY A . n A 1 103 SER 103 674 674 SER SER A . n A 1 104 SER 104 675 675 SER SER A . n A 1 105 ILE 105 676 ? ? ? A . n A 1 106 GLY 106 677 ? ? ? A . n A 1 107 LYS 107 678 ? ? ? A . n B 1 1 GLY 1 572 ? ? ? B . n B 1 2 SER 2 573 ? ? ? B . n B 1 3 GLY 3 574 ? ? ? B . n B 1 4 MET 4 575 575 MET MET B . n B 1 5 SER 5 576 576 SER SER B . n B 1 6 TYR 6 577 577 TYR TYR B . n B 1 7 ALA 7 578 578 ALA ALA B . n B 1 8 MET 8 579 579 MET MET B . n B 1 9 CYS 9 580 580 CYS CYS B . n B 1 10 LEU 10 581 581 LEU LEU B . n B 1 11 ASN 11 582 582 ASN ASN B . n B 1 12 THR 12 583 583 THR THR B . n B 1 13 PHE 13 584 584 PHE PHE B . n B 1 14 VAL 14 585 585 VAL VAL B . n B 1 15 LEU 15 586 586 LEU LEU B . n B 1 16 LYS 16 587 587 LYS LYS B . n B 1 17 LYS 17 588 588 LYS LYS B . n B 1 18 GLU 18 589 589 GLU GLU B . n B 1 19 VAL 19 590 590 VAL VAL B . n B 1 20 SER 20 591 591 SER SER B . n B 1 21 GLU 21 592 592 GLU GLU B . n B 1 22 THR 22 593 593 THR THR B . n B 1 23 GLN 23 594 594 GLN GLN B . n B 1 24 HIS 24 595 595 HIS HIS B . n B 1 25 GLY 25 596 596 GLY GLY B . n B 1 26 THR 26 597 597 THR THR B . n B 1 27 ILE 27 598 598 ILE ILE B . n B 1 28 LEU 28 599 599 LEU LEU B . n B 1 29 ILE 29 600 600 ILE ILE B . n B 1 30 LYS 30 601 601 LYS LYS B . n B 1 31 VAL 31 602 602 VAL VAL B . n B 1 32 GLU 32 603 603 GLU GLU B . n B 1 33 TYR 33 604 604 TYR TYR B . n B 1 34 LYS 34 605 605 LYS LYS B . n B 1 35 GLY 35 606 606 GLY GLY B . n B 1 36 GLU 36 607 607 GLU GLU B . n B 1 37 ASP 37 608 608 ASP ASP B . n B 1 38 ALA 38 609 609 ALA ALA B . n B 1 39 PRO 39 610 610 PRO PRO B . n B 1 40 CYS 40 611 611 CYS CYS B . n B 1 41 LYS 41 612 612 LYS LYS B . n B 1 42 ILE 42 613 613 ILE ILE B . n B 1 43 PRO 43 614 614 PRO PRO B . n B 1 44 PHE 44 615 615 PHE PHE B . n B 1 45 SER 45 616 616 SER SER B . n B 1 46 THR 46 617 617 THR THR B . n B 1 47 GLU 47 618 618 GLU GLU B . n B 1 48 ASP 48 619 619 ASP ASP B . n B 1 49 GLY 49 620 620 GLY GLY B . n B 1 50 GLN 50 621 621 GLN GLN B . n B 1 51 GLY 51 622 622 GLY GLY B . n B 1 52 LYS 52 623 623 LYS LYS B . n B 1 53 ALA 53 624 624 ALA ALA B . n B 1 54 HIS 54 625 625 HIS HIS B . n B 1 55 ASN 55 626 626 ASN ASN B . n B 1 56 GLY 56 627 627 GLY GLY B . n B 1 57 ARG 57 628 628 ARG ARG B . n B 1 58 LEU 58 629 629 LEU LEU B . n B 1 59 ILE 59 630 630 ILE ILE B . n B 1 60 THR 60 631 631 THR THR B . n B 1 61 ALA 61 632 632 ALA ALA B . n B 1 62 ASN 62 633 633 ASN ASN B . n B 1 63 PRO 63 634 634 PRO PRO B . n B 1 64 VAL 64 635 635 VAL VAL B . n B 1 65 VAL 65 636 636 VAL VAL B . n B 1 66 THR 66 637 637 THR THR B . n B 1 67 LYS 67 638 638 LYS LYS B . n B 1 68 LYS 68 639 639 LYS LYS B . n B 1 69 GLU 69 640 640 GLU GLU B . n B 1 70 GLU 70 641 641 GLU GLU B . n B 1 71 PRO 71 642 642 PRO PRO B . n B 1 72 VAL 72 643 643 VAL VAL B . n B 1 73 ASN 73 644 644 ASN ASN B . n B 1 74 ILE 74 645 645 ILE ILE B . n B 1 75 GLU 75 646 646 GLU GLU B . n B 1 76 ALA 76 647 647 ALA ALA B . n B 1 77 GLU 77 648 648 GLU GLU B . n B 1 78 PRO 78 649 649 PRO PRO B . n B 1 79 PRO 79 650 650 PRO PRO B . n B 1 80 PHE 80 651 651 PHE PHE B . n B 1 81 GLY 81 652 652 GLY GLY B . n B 1 82 GLU 82 653 653 GLU GLU B . n B 1 83 SER 83 654 654 SER SER B . n B 1 84 ASN 84 655 655 ASN ASN B . n B 1 85 ILE 85 656 656 ILE ILE B . n B 1 86 VAL 86 657 657 VAL VAL B . n B 1 87 ILE 87 658 658 ILE ILE B . n B 1 88 GLY 88 659 659 GLY GLY B . n B 1 89 ILE 89 660 660 ILE ILE B . n B 1 90 GLY 90 661 661 GLY GLY B . n B 1 91 ASP 91 662 662 ASP ASP B . n B 1 92 LYS 92 663 663 LYS LYS B . n B 1 93 ALA 93 664 664 ALA ALA B . n B 1 94 LEU 94 665 665 LEU LEU B . n B 1 95 LYS 95 666 666 LYS LYS B . n B 1 96 ILE 96 667 667 ILE ILE B . n B 1 97 ASN 97 668 668 ASN ASN B . n B 1 98 TRP 98 669 669 TRP TRP B . n B 1 99 TYR 99 670 670 TYR TYR B . n B 1 100 ARG 100 671 671 ARG ARG B . n B 1 101 LYS 101 672 672 LYS LYS B . n B 1 102 GLY 102 673 673 GLY GLY B . n B 1 103 SER 103 674 674 SER SER B . n B 1 104 SER 104 675 675 SER SER B . n B 1 105 ILE 105 676 676 ILE ILE B . n B 1 106 GLY 106 677 677 GLY GLY B . n B 1 107 LYS 107 678 678 LYS LYS B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-26 2 'Structure model' 1 1 2013-08-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -18.3256 _pdbx_refine_tls.origin_y 0.0971 _pdbx_refine_tls.origin_z 14.4097 _pdbx_refine_tls.T[1][1] 0.1364 _pdbx_refine_tls.T[2][2] 0.1621 _pdbx_refine_tls.T[3][3] 0.1541 _pdbx_refine_tls.T[1][2] 0.0560 _pdbx_refine_tls.T[1][3] 0.0212 _pdbx_refine_tls.T[2][3] 0.0477 _pdbx_refine_tls.L[1][1] 0.1377 _pdbx_refine_tls.L[2][2] 1.7336 _pdbx_refine_tls.L[3][3] 0.2941 _pdbx_refine_tls.L[1][2] 0.0485 _pdbx_refine_tls.L[1][3] -0.1146 _pdbx_refine_tls.L[2][3] 0.1375 _pdbx_refine_tls.S[1][1] 0.0352 _pdbx_refine_tls.S[1][2] 0.0201 _pdbx_refine_tls.S[1][3] 0.0317 _pdbx_refine_tls.S[2][1] -0.2010 _pdbx_refine_tls.S[2][2] -0.0951 _pdbx_refine_tls.S[2][3] -0.2910 _pdbx_refine_tls.S[3][1] 0.0408 _pdbx_refine_tls.S[3][2] 0.0348 _pdbx_refine_tls.S[3][3] 0.0240 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing 'Auto MR' ? 2 PHENIX refinement '(phenix.refine: 1.7.1_743)' ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLY 606 ? ? O A HOH 848 ? ? 1.91 2 1 O A HOH 825 ? ? O A HOH 850 ? ? 2.08 3 1 OE2 A GLU 592 ? ? O A HOH 828 ? ? 2.16 4 1 O B HOH 823 ? ? O B HOH 833 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 582 ? ? -99.19 -155.16 2 1 ASN A 626 ? ? -110.43 60.97 3 1 ALA A 632 ? ? 72.15 -5.00 4 1 LYS A 663 ? ? 78.05 -23.51 5 1 ALA B 632 ? ? -46.54 -81.79 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ALA _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 632 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASN _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 633 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.00 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 621 ? OE1 ? A GLN 50 OE1 2 1 Y 1 A GLN 621 ? NE2 ? A GLN 50 NE2 3 1 Y 1 A LYS 623 ? CE ? A LYS 52 CE 4 1 Y 1 A LYS 623 ? NZ ? A LYS 52 NZ 5 1 Y 1 A LYS 638 ? CG ? A LYS 67 CG 6 1 Y 1 A LYS 638 ? CD ? A LYS 67 CD 7 1 Y 1 A LYS 638 ? CE ? A LYS 67 CE 8 1 Y 1 A LYS 638 ? NZ ? A LYS 67 NZ 9 1 Y 1 B LYS 638 ? CG ? B LYS 67 CG 10 1 Y 1 B LYS 638 ? CD ? B LYS 67 CD 11 1 Y 1 B LYS 638 ? CE ? B LYS 67 CE 12 1 Y 1 B LYS 638 ? NZ ? B LYS 67 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 572 ? A GLY 1 2 1 Y 1 A SER 573 ? A SER 2 3 1 Y 1 A GLY 574 ? A GLY 3 4 1 Y 1 A MET 575 ? A MET 4 5 1 Y 1 A ILE 676 ? A ILE 105 6 1 Y 1 A GLY 677 ? A GLY 106 7 1 Y 1 A LYS 678 ? A LYS 107 8 1 Y 1 B GLY 572 ? B GLY 1 9 1 Y 1 B SER 573 ? B SER 2 10 1 Y 1 B GLY 574 ? B GLY 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 701 1 SO4 SO4 A . D 2 SO4 1 701 2 SO4 SO4 B . E 3 HOH 1 801 2 HOH HOH A . E 3 HOH 2 802 3 HOH HOH A . E 3 HOH 3 803 5 HOH HOH A . E 3 HOH 4 804 8 HOH HOH A . E 3 HOH 5 805 11 HOH HOH A . E 3 HOH 6 806 12 HOH HOH A . E 3 HOH 7 807 14 HOH HOH A . E 3 HOH 8 808 15 HOH HOH A . E 3 HOH 9 809 21 HOH HOH A . E 3 HOH 10 810 23 HOH HOH A . E 3 HOH 11 811 25 HOH HOH A . E 3 HOH 12 812 26 HOH HOH A . E 3 HOH 13 813 28 HOH HOH A . E 3 HOH 14 814 31 HOH HOH A . E 3 HOH 15 815 32 HOH HOH A . E 3 HOH 16 816 33 HOH HOH A . E 3 HOH 17 817 38 HOH HOH A . E 3 HOH 18 818 39 HOH HOH A . E 3 HOH 19 819 41 HOH HOH A . E 3 HOH 20 820 43 HOH HOH A . E 3 HOH 21 821 45 HOH HOH A . E 3 HOH 22 822 46 HOH HOH A . E 3 HOH 23 823 49 HOH HOH A . E 3 HOH 24 824 50 HOH HOH A . E 3 HOH 25 825 51 HOH HOH A . E 3 HOH 26 826 55 HOH HOH A . E 3 HOH 27 827 57 HOH HOH A . E 3 HOH 28 828 60 HOH HOH A . E 3 HOH 29 829 61 HOH HOH A . E 3 HOH 30 830 69 HOH HOH A . E 3 HOH 31 831 71 HOH HOH A . E 3 HOH 32 832 72 HOH HOH A . E 3 HOH 33 833 74 HOH HOH A . E 3 HOH 34 834 75 HOH HOH A . E 3 HOH 35 835 77 HOH HOH A . E 3 HOH 36 836 80 HOH HOH A . E 3 HOH 37 837 81 HOH HOH A . E 3 HOH 38 838 83 HOH HOH A . E 3 HOH 39 839 86 HOH HOH A . E 3 HOH 40 840 93 HOH HOH A . E 3 HOH 41 841 94 HOH HOH A . E 3 HOH 42 842 96 HOH HOH A . E 3 HOH 43 843 97 HOH HOH A . E 3 HOH 44 844 99 HOH HOH A . E 3 HOH 45 845 102 HOH HOH A . E 3 HOH 46 846 103 HOH HOH A . E 3 HOH 47 847 105 HOH HOH A . E 3 HOH 48 848 108 HOH HOH A . E 3 HOH 49 849 109 HOH HOH A . E 3 HOH 50 850 111 HOH HOH A . E 3 HOH 51 851 112 HOH HOH A . E 3 HOH 52 852 115 HOH HOH A . E 3 HOH 53 853 116 HOH HOH A . E 3 HOH 54 854 117 HOH HOH A . E 3 HOH 55 855 120 HOH HOH A . E 3 HOH 56 856 122 HOH HOH A . E 3 HOH 57 857 123 HOH HOH A . E 3 HOH 58 858 124 HOH HOH A . E 3 HOH 59 859 126 HOH HOH A . E 3 HOH 60 860 127 HOH HOH A . E 3 HOH 61 861 128 HOH HOH A . E 3 HOH 62 862 131 HOH HOH A . E 3 HOH 63 863 132 HOH HOH A . E 3 HOH 64 864 134 HOH HOH A . E 3 HOH 65 865 138 HOH HOH A . E 3 HOH 66 866 141 HOH HOH A . E 3 HOH 67 867 143 HOH HOH A . F 3 HOH 1 801 1 HOH HOH B . F 3 HOH 2 802 4 HOH HOH B . F 3 HOH 3 803 6 HOH HOH B . F 3 HOH 4 804 7 HOH HOH B . F 3 HOH 5 805 9 HOH HOH B . F 3 HOH 6 806 10 HOH HOH B . F 3 HOH 7 807 13 HOH HOH B . F 3 HOH 8 808 16 HOH HOH B . F 3 HOH 9 809 17 HOH HOH B . F 3 HOH 10 810 18 HOH HOH B . F 3 HOH 11 811 19 HOH HOH B . F 3 HOH 12 812 20 HOH HOH B . F 3 HOH 13 813 22 HOH HOH B . F 3 HOH 14 814 24 HOH HOH B . F 3 HOH 15 815 27 HOH HOH B . F 3 HOH 16 816 29 HOH HOH B . F 3 HOH 17 817 30 HOH HOH B . F 3 HOH 18 818 34 HOH HOH B . F 3 HOH 19 819 35 HOH HOH B . F 3 HOH 20 820 36 HOH HOH B . F 3 HOH 21 821 37 HOH HOH B . F 3 HOH 22 822 40 HOH HOH B . F 3 HOH 23 823 42 HOH HOH B . F 3 HOH 24 824 44 HOH HOH B . F 3 HOH 25 825 47 HOH HOH B . F 3 HOH 26 826 48 HOH HOH B . F 3 HOH 27 827 52 HOH HOH B . F 3 HOH 28 828 53 HOH HOH B . F 3 HOH 29 829 54 HOH HOH B . F 3 HOH 30 830 56 HOH HOH B . F 3 HOH 31 831 58 HOH HOH B . F 3 HOH 32 832 59 HOH HOH B . F 3 HOH 33 833 62 HOH HOH B . F 3 HOH 34 834 63 HOH HOH B . F 3 HOH 35 835 64 HOH HOH B . F 3 HOH 36 836 65 HOH HOH B . F 3 HOH 37 837 66 HOH HOH B . F 3 HOH 38 838 67 HOH HOH B . F 3 HOH 39 839 68 HOH HOH B . F 3 HOH 40 840 70 HOH HOH B . F 3 HOH 41 841 73 HOH HOH B . F 3 HOH 42 842 76 HOH HOH B . F 3 HOH 43 843 78 HOH HOH B . F 3 HOH 44 844 79 HOH HOH B . F 3 HOH 45 845 82 HOH HOH B . F 3 HOH 46 846 84 HOH HOH B . F 3 HOH 47 847 85 HOH HOH B . F 3 HOH 48 848 87 HOH HOH B . F 3 HOH 49 849 88 HOH HOH B . F 3 HOH 50 850 89 HOH HOH B . F 3 HOH 51 851 90 HOH HOH B . F 3 HOH 52 852 91 HOH HOH B . F 3 HOH 53 853 92 HOH HOH B . F 3 HOH 54 854 95 HOH HOH B . F 3 HOH 55 855 98 HOH HOH B . F 3 HOH 56 856 100 HOH HOH B . F 3 HOH 57 857 101 HOH HOH B . F 3 HOH 58 858 104 HOH HOH B . F 3 HOH 59 859 106 HOH HOH B . F 3 HOH 60 860 107 HOH HOH B . F 3 HOH 61 861 110 HOH HOH B . F 3 HOH 62 862 113 HOH HOH B . F 3 HOH 63 863 114 HOH HOH B . F 3 HOH 64 864 118 HOH HOH B . F 3 HOH 65 865 119 HOH HOH B . F 3 HOH 66 866 121 HOH HOH B . F 3 HOH 67 867 125 HOH HOH B . F 3 HOH 68 868 129 HOH HOH B . F 3 HOH 69 869 130 HOH HOH B . F 3 HOH 70 870 133 HOH HOH B . F 3 HOH 71 871 135 HOH HOH B . F 3 HOH 72 872 136 HOH HOH B . F 3 HOH 73 873 137 HOH HOH B . F 3 HOH 74 874 139 HOH HOH B . F 3 HOH 75 875 140 HOH HOH B . F 3 HOH 76 876 142 HOH HOH B . F 3 HOH 77 877 144 HOH HOH B . F 3 HOH 78 878 145 HOH HOH B . F 3 HOH 79 879 146 HOH HOH B . #