data_3WBD # _entry.id 3WBD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3WBD pdb_00003wbd 10.2210/pdb3wbd/pdb RCSB RCSB096121 ? ? WWPDB D_1000096121 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1PLG _pdbx_database_related.details 'Search model for molecular replacement' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3WBD _pdbx_database_status.recvd_initial_deposition_date 2013-05-14 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagae, M.' 1 'Ikeda, A.' 2 'Hanashima, S.' 3 'Kitajima, K.' 4 'Sato, C.' 5 'Yamaguchi, Y.' 6 # _citation.id primary _citation.title ;Crystal structure of anti-polysialic acid antibody single chain Fv fragment complexed with octasialic acid: insight into the binding preference for polysialic acid. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 288 _citation.page_first 33784 _citation.page_last 33796 _citation.year 2013 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24100042 _citation.pdbx_database_id_DOI 10.1074/jbc.M113.496224 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagae, M.' 1 ? primary 'Ikeda, A.' 2 ? primary 'Hane, M.' 3 ? primary 'Hanashima, S.' 4 ? primary 'Kitajima, K.' 5 ? primary 'Sato, C.' 6 ? primary 'Yamaguchi, Y.' 7 ? # _cell.entry_id 3WBD _cell.length_a 161.174 _cell.length_b 161.174 _cell.length_c 45.884 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3WBD _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'single chain Fv fragment of mAb735' 26267.146 2 ? ? ? ? 2 branched man ;N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid ; 2056.799 1 ? ? ? ? 3 non-polymer syn 'CITRATE ANION' 189.100 1 ? ? ? ? 4 water nat water 18.015 158 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLYWYLQKPGQSPKPLIYRVSNRFSGVPDRFSGSGSGTDFTL KISRVEAEDLGVYFCFQGTHVPYTFGGGTRLEIKGGGGSGGGGSGGGGSQIQLQQSGPELVRPGASVKISCKASGYTFTD YYIHWVKQRPGEGLEWIGWIYPGSGNTKYNEKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYFCARGGKFAMDYWGQGT SVTVSS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLYWYLQKPGQSPKPLIYRVSNRFSGVPDRFSGSGSGTDFTL KISRVEAEDLGVYFCFQGTHVPYTFGGGTRLEIKGGGGSGGGGSGGGGSQIQLQQSGPELVRPGASVKISCKASGYTFTD YYIHWVKQRPGEGLEWIGWIYPGSGNTKYNEKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYFCARGGKFAMDYWGQGT SVTVSS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ASP n 1 4 VAL n 1 5 VAL n 1 6 MET n 1 7 THR n 1 8 GLN n 1 9 THR n 1 10 PRO n 1 11 LEU n 1 12 SER n 1 13 LEU n 1 14 PRO n 1 15 VAL n 1 16 SER n 1 17 LEU n 1 18 GLY n 1 19 ASP n 1 20 GLN n 1 21 ALA n 1 22 SER n 1 23 ILE n 1 24 SER n 1 25 CYS n 1 26 ARG n 1 27 SER n 1 28 SER n 1 29 GLN n 1 30 SER n 1 31 LEU n 1 32 VAL n 1 33 HIS n 1 34 SER n 1 35 ASN n 1 36 GLY n 1 37 ASN n 1 38 THR n 1 39 TYR n 1 40 LEU n 1 41 TYR n 1 42 TRP n 1 43 TYR n 1 44 LEU n 1 45 GLN n 1 46 LYS n 1 47 PRO n 1 48 GLY n 1 49 GLN n 1 50 SER n 1 51 PRO n 1 52 LYS n 1 53 PRO n 1 54 LEU n 1 55 ILE n 1 56 TYR n 1 57 ARG n 1 58 VAL n 1 59 SER n 1 60 ASN n 1 61 ARG n 1 62 PHE n 1 63 SER n 1 64 GLY n 1 65 VAL n 1 66 PRO n 1 67 ASP n 1 68 ARG n 1 69 PHE n 1 70 SER n 1 71 GLY n 1 72 SER n 1 73 GLY n 1 74 SER n 1 75 GLY n 1 76 THR n 1 77 ASP n 1 78 PHE n 1 79 THR n 1 80 LEU n 1 81 LYS n 1 82 ILE n 1 83 SER n 1 84 ARG n 1 85 VAL n 1 86 GLU n 1 87 ALA n 1 88 GLU n 1 89 ASP n 1 90 LEU n 1 91 GLY n 1 92 VAL n 1 93 TYR n 1 94 PHE n 1 95 CYS n 1 96 PHE n 1 97 GLN n 1 98 GLY n 1 99 THR n 1 100 HIS n 1 101 VAL n 1 102 PRO n 1 103 TYR n 1 104 THR n 1 105 PHE n 1 106 GLY n 1 107 GLY n 1 108 GLY n 1 109 THR n 1 110 ARG n 1 111 LEU n 1 112 GLU n 1 113 ILE n 1 114 LYS n 1 115 GLY n 1 116 GLY n 1 117 GLY n 1 118 GLY n 1 119 SER n 1 120 GLY n 1 121 GLY n 1 122 GLY n 1 123 GLY n 1 124 SER n 1 125 GLY n 1 126 GLY n 1 127 GLY n 1 128 GLY n 1 129 SER n 1 130 GLN n 1 131 ILE n 1 132 GLN n 1 133 LEU n 1 134 GLN n 1 135 GLN n 1 136 SER n 1 137 GLY n 1 138 PRO n 1 139 GLU n 1 140 LEU n 1 141 VAL n 1 142 ARG n 1 143 PRO n 1 144 GLY n 1 145 ALA n 1 146 SER n 1 147 VAL n 1 148 LYS n 1 149 ILE n 1 150 SER n 1 151 CYS n 1 152 LYS n 1 153 ALA n 1 154 SER n 1 155 GLY n 1 156 TYR n 1 157 THR n 1 158 PHE n 1 159 THR n 1 160 ASP n 1 161 TYR n 1 162 TYR n 1 163 ILE n 1 164 HIS n 1 165 TRP n 1 166 VAL n 1 167 LYS n 1 168 GLN n 1 169 ARG n 1 170 PRO n 1 171 GLY n 1 172 GLU n 1 173 GLY n 1 174 LEU n 1 175 GLU n 1 176 TRP n 1 177 ILE n 1 178 GLY n 1 179 TRP n 1 180 ILE n 1 181 TYR n 1 182 PRO n 1 183 GLY n 1 184 SER n 1 185 GLY n 1 186 ASN n 1 187 THR n 1 188 LYS n 1 189 TYR n 1 190 ASN n 1 191 GLU n 1 192 LYS n 1 193 PHE n 1 194 LYS n 1 195 GLY n 1 196 LYS n 1 197 ALA n 1 198 THR n 1 199 LEU n 1 200 THR n 1 201 VAL n 1 202 ASP n 1 203 THR n 1 204 SER n 1 205 SER n 1 206 SER n 1 207 THR n 1 208 ALA n 1 209 TYR n 1 210 MET n 1 211 GLN n 1 212 LEU n 1 213 SER n 1 214 SER n 1 215 LEU n 1 216 THR n 1 217 SER n 1 218 GLU n 1 219 ASP n 1 220 SER n 1 221 ALA n 1 222 VAL n 1 223 TYR n 1 224 PHE n 1 225 CYS n 1 226 ALA n 1 227 ARG n 1 228 GLY n 1 229 GLY n 1 230 LYS n 1 231 PHE n 1 232 ALA n 1 233 MET n 1 234 ASP n 1 235 TYR n 1 236 TRP n 1 237 GLY n 1 238 GLN n 1 239 GLY n 1 240 THR n 1 241 SER n 1 242 VAL n 1 243 THR n 1 244 VAL n 1 245 SER n 1 246 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pCold vector' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3WBD _struct_ref.pdbx_db_accession 3WBD _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3WBD A 1 ? 246 ? 3WBD -1 ? 244 ? -1 244 2 1 3WBD B 1 ? 246 ? 3WBD -1 ? 244 ? -1 244 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FLC non-polymer . 'CITRATE ANION' ? 'C6 H5 O7 -3' 189.100 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' 'N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID' 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3WBD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.27 _exptl_crystal.density_percent_sol 62.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '1.8M Ammonium citrate tribasic, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-11-15 _diffrn_detector.details monochrometer # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Numerical link type Si(111) double crystal monochromator, liquid nitrogen cooling' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 3WBD _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100 _reflns.d_resolution_high 1.8 _reflns.number_obs 63488 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.092 _reflns.pdbx_netI_over_sigmaI 40.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.83 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.415 _reflns_shell.meanI_over_sigI_obs 6.6 _reflns_shell.pdbx_redundancy 11.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3178 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3WBD _refine.ls_number_reflns_obs 60249 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 100.00 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.90 _refine.ls_R_factor_obs 0.23446 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23317 _refine.ls_R_factor_R_free 0.25883 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 3221 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.931 _refine.correlation_coeff_Fo_to_Fc_free 0.912 _refine.B_iso_mean 25.808 _refine.aniso_B[1][1] -0.04 _refine.aniso_B[2][2] -0.04 _refine.aniso_B[3][3] 0.06 _refine.aniso_B[1][2] -0.02 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1PLG _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.126 _refine.pdbx_overall_ESU_R_Free 0.120 _refine.overall_SU_ML 0.081 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.533 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3557 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 154 _refine_hist.number_atoms_solvent 158 _refine_hist.number_atoms_total 3869 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 100.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.020 ? 3812 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.251 1.989 ? 5170 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.477 5.000 ? 457 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 31.367 23.421 ? 152 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.811 15.000 ? 577 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 18.419 15.000 ? 18 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.090 0.200 ? 563 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.021 ? 2854 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.801 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 4240 _refine_ls_shell.R_factor_R_work 0.277 _refine_ls_shell.percent_reflns_obs 99.73 _refine_ls_shell.R_factor_R_free 0.296 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 236 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3WBD _struct.title 'Crystal structure of anti-polysialic acid antibody single chain Fv fragment (mAb735) complexed with octasialic acid' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3WBD _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'beta-sandwich, immunoglobulin fold, single chain Fv fragment, anti-polysialic acid, alpha2-8 linked polysialic acid, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 86 ? LEU A 90 ? GLU A 84 LEU A 88 5 ? 5 HELX_P HELX_P2 2 THR A 157 ? TYR A 161 ? THR A 155 TYR A 159 5 ? 5 HELX_P HELX_P3 3 THR A 203 ? SER A 205 ? THR A 201 SER A 203 5 ? 3 HELX_P HELX_P4 4 THR A 216 ? SER A 220 ? THR A 214 SER A 218 5 ? 5 HELX_P HELX_P5 5 GLU B 86 ? LEU B 90 ? GLU B 84 LEU B 88 5 ? 5 HELX_P HELX_P6 6 THR B 157 ? TYR B 161 ? THR B 155 TYR B 159 5 ? 5 HELX_P HELX_P7 7 THR B 203 ? SER B 205 ? THR B 201 SER B 203 5 ? 3 HELX_P HELX_P8 8 THR B 216 ? SER B 220 ? THR B 214 SER B 218 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 23 A CYS 93 1_555 ? ? ? ? ? ? ? 2.090 ? ? disulf2 disulf ? ? A CYS 151 SG ? ? ? 1_555 A CYS 225 SG ? ? A CYS 149 A CYS 223 1_555 ? ? ? ? ? ? ? 2.049 ? ? disulf3 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 95 SG ? ? B CYS 23 B CYS 93 1_555 ? ? ? ? ? ? ? 2.060 ? ? disulf4 disulf ? ? B CYS 151 SG ? ? ? 1_555 B CYS 225 SG ? ? B CYS 149 B CYS 223 1_555 ? ? ? ? ? ? ? 2.068 ? ? covale1 covale both ? C SIA . O8 ? ? ? 1_555 C SIA . C2 ? ? C SIA 1 C SIA 2 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale2 covale both ? C SIA . O8 ? ? ? 1_555 C SIA . C2 ? ? C SIA 2 C SIA 3 1_555 ? ? ? ? ? ? ? 1.428 ? ? covale3 covale both ? C SIA . O8 ? ? ? 1_555 C SIA . C2 ? ? C SIA 3 C SIA 4 1_555 ? ? ? ? ? ? ? 1.434 ? ? covale4 covale both ? C SIA . O8 ? ? ? 1_555 C SIA . C2 ? ? C SIA 4 C SIA 5 1_555 ? ? ? ? ? ? ? 1.449 ? ? covale5 covale both ? C SIA . O8 ? ? ? 1_555 C SIA . C2 ? ? C SIA 5 C SIA 6 1_555 ? ? ? ? ? ? ? 1.410 ? ? covale6 covale both ? C SIA . O8 ? ? ? 1_555 C SIA . C2 ? ? C SIA 6 C SIA 7 1_555 ? ? ? ? ? ? ? 1.433 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 9 A . ? THR 7 A PRO 10 A ? PRO 8 A 1 -3.06 2 VAL 101 A . ? VAL 99 A PRO 102 A ? PRO 100 A 1 0.19 3 THR 9 B . ? THR 7 B PRO 10 B ? PRO 8 B 1 -4.53 4 VAL 101 B . ? VAL 99 B PRO 102 B ? PRO 100 B 1 0.29 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 6 ? F ? 4 ? G ? 4 ? H ? 6 ? I ? 4 ? J ? 4 ? K ? 6 ? L ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel F 1 2 ? parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel H 4 5 ? anti-parallel H 5 6 ? anti-parallel I 1 2 ? parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? parallel K 2 3 ? anti-parallel K 3 4 ? anti-parallel K 4 5 ? anti-parallel K 5 6 ? anti-parallel L 1 2 ? parallel L 2 3 ? anti-parallel L 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 6 ? THR A 9 ? MET A 4 THR A 7 A 2 ALA A 21 ? SER A 27 ? ALA A 19 SER A 25 A 3 ASP A 77 ? ILE A 82 ? ASP A 75 ILE A 80 A 4 PHE A 69 ? SER A 74 ? PHE A 67 SER A 72 B 1 SER A 12 ? LEU A 13 ? SER A 10 LEU A 11 B 2 THR A 109 ? LEU A 111 ? THR A 107 LEU A 109 B 3 GLY A 91 ? GLN A 97 ? GLY A 89 GLN A 95 B 4 LEU A 40 ? GLN A 45 ? LEU A 38 GLN A 43 B 5 PRO A 51 ? TYR A 56 ? PRO A 49 TYR A 54 B 6 ASN A 60 ? ARG A 61 ? ASN A 58 ARG A 59 C 1 SER A 12 ? LEU A 13 ? SER A 10 LEU A 11 C 2 THR A 109 ? LEU A 111 ? THR A 107 LEU A 109 C 3 GLY A 91 ? GLN A 97 ? GLY A 89 GLN A 95 C 4 THR A 104 ? PHE A 105 ? THR A 102 PHE A 103 D 1 GLN A 132 ? GLN A 135 ? GLN A 130 GLN A 133 D 2 VAL A 147 ? SER A 154 ? VAL A 145 SER A 152 D 3 THR A 207 ? LEU A 212 ? THR A 205 LEU A 210 D 4 ALA A 197 ? ASP A 202 ? ALA A 195 ASP A 200 E 1 GLU A 139 ? VAL A 141 ? GLU A 137 VAL A 139 E 2 THR A 240 ? VAL A 244 ? THR A 238 VAL A 242 E 3 ALA A 221 ? GLY A 228 ? ALA A 219 GLY A 226 E 4 TYR A 162 ? GLN A 168 ? TYR A 160 GLN A 166 E 5 LEU A 174 ? ILE A 180 ? LEU A 172 ILE A 178 E 6 THR A 187 ? TYR A 189 ? THR A 185 TYR A 187 F 1 GLU A 139 ? VAL A 141 ? GLU A 137 VAL A 139 F 2 THR A 240 ? VAL A 244 ? THR A 238 VAL A 242 F 3 ALA A 221 ? GLY A 228 ? ALA A 219 GLY A 226 F 4 MET A 233 ? TRP A 236 ? MET A 231 TRP A 234 G 1 MET B 6 ? THR B 9 ? MET B 4 THR B 7 G 2 ALA B 21 ? SER B 27 ? ALA B 19 SER B 25 G 3 ASP B 77 ? ILE B 82 ? ASP B 75 ILE B 80 G 4 PHE B 69 ? SER B 74 ? PHE B 67 SER B 72 H 1 SER B 12 ? VAL B 15 ? SER B 10 VAL B 13 H 2 THR B 109 ? ILE B 113 ? THR B 107 ILE B 111 H 3 GLY B 91 ? GLN B 97 ? GLY B 89 GLN B 95 H 4 LEU B 40 ? GLN B 45 ? LEU B 38 GLN B 43 H 5 LYS B 52 ? TYR B 56 ? LYS B 50 TYR B 54 H 6 ASN B 60 ? ARG B 61 ? ASN B 58 ARG B 59 I 1 SER B 12 ? VAL B 15 ? SER B 10 VAL B 13 I 2 THR B 109 ? ILE B 113 ? THR B 107 ILE B 111 I 3 GLY B 91 ? GLN B 97 ? GLY B 89 GLN B 95 I 4 THR B 104 ? PHE B 105 ? THR B 102 PHE B 103 J 1 GLN B 132 ? GLN B 135 ? GLN B 130 GLN B 133 J 2 VAL B 147 ? SER B 154 ? VAL B 145 SER B 152 J 3 THR B 207 ? LEU B 212 ? THR B 205 LEU B 210 J 4 ALA B 197 ? ASP B 202 ? ALA B 195 ASP B 200 K 1 GLU B 139 ? VAL B 141 ? GLU B 137 VAL B 139 K 2 THR B 240 ? VAL B 244 ? THR B 238 VAL B 242 K 3 ALA B 221 ? GLY B 228 ? ALA B 219 GLY B 226 K 4 TYR B 162 ? GLN B 168 ? TYR B 160 GLN B 166 K 5 LEU B 174 ? ILE B 180 ? LEU B 172 ILE B 178 K 6 THR B 187 ? TYR B 189 ? THR B 185 TYR B 187 L 1 GLU B 139 ? VAL B 141 ? GLU B 137 VAL B 139 L 2 THR B 240 ? VAL B 244 ? THR B 238 VAL B 242 L 3 ALA B 221 ? GLY B 228 ? ALA B 219 GLY B 226 L 4 MET B 233 ? TRP B 236 ? MET B 231 TRP B 234 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 7 ? N THR A 5 O ARG A 26 ? O ARG A 24 A 2 3 N ALA A 21 ? N ALA A 19 O ILE A 82 ? O ILE A 80 A 3 4 O LYS A 81 ? O LYS A 79 N SER A 70 ? N SER A 68 B 1 2 N LEU A 13 ? N LEU A 11 O ARG A 110 ? O ARG A 108 B 2 3 O LEU A 111 ? O LEU A 109 N GLY A 91 ? N GLY A 89 B 3 4 O PHE A 94 ? O PHE A 92 N TYR A 43 ? N TYR A 41 B 4 5 N TRP A 42 ? N TRP A 40 O LEU A 54 ? O LEU A 52 B 5 6 N TYR A 56 ? N TYR A 54 O ASN A 60 ? O ASN A 58 C 1 2 N LEU A 13 ? N LEU A 11 O ARG A 110 ? O ARG A 108 C 2 3 O LEU A 111 ? O LEU A 109 N GLY A 91 ? N GLY A 89 C 3 4 N GLN A 97 ? N GLN A 95 O THR A 104 ? O THR A 102 D 1 2 N GLN A 134 ? N GLN A 132 O LYS A 152 ? O LYS A 150 D 2 3 N VAL A 147 ? N VAL A 145 O LEU A 212 ? O LEU A 210 D 3 4 O THR A 207 ? O THR A 205 N ASP A 202 ? N ASP A 200 E 1 2 N GLU A 139 ? N GLU A 137 O SER A 241 ? O SER A 239 E 2 3 O VAL A 242 ? O VAL A 240 N ALA A 221 ? N ALA A 219 E 3 4 O ALA A 226 ? O ALA A 224 N HIS A 164 ? N HIS A 162 E 4 5 N TRP A 165 ? N TRP A 163 O ILE A 177 ? O ILE A 175 E 5 6 N TRP A 179 ? N TRP A 177 O LYS A 188 ? O LYS A 186 F 1 2 N GLU A 139 ? N GLU A 137 O SER A 241 ? O SER A 239 F 2 3 O VAL A 242 ? O VAL A 240 N ALA A 221 ? N ALA A 219 F 3 4 N ARG A 227 ? N ARG A 225 O ASP A 234 ? O ASP A 232 G 1 2 N THR B 7 ? N THR B 5 O ARG B 26 ? O ARG B 24 G 2 3 N ILE B 23 ? N ILE B 21 O LEU B 80 ? O LEU B 78 G 3 4 O LYS B 81 ? O LYS B 79 N SER B 70 ? N SER B 68 H 1 2 N LEU B 13 ? N LEU B 11 O ARG B 110 ? O ARG B 108 H 2 3 O LEU B 111 ? O LEU B 109 N GLY B 91 ? N GLY B 89 H 3 4 O VAL B 92 ? O VAL B 90 N GLN B 45 ? N GLN B 43 H 4 5 N TRP B 42 ? N TRP B 40 O LEU B 54 ? O LEU B 52 H 5 6 N TYR B 56 ? N TYR B 54 O ASN B 60 ? O ASN B 58 I 1 2 N LEU B 13 ? N LEU B 11 O ARG B 110 ? O ARG B 108 I 2 3 O LEU B 111 ? O LEU B 109 N GLY B 91 ? N GLY B 89 I 3 4 N GLN B 97 ? N GLN B 95 O THR B 104 ? O THR B 102 J 1 2 N GLN B 134 ? N GLN B 132 O LYS B 152 ? O LYS B 150 J 2 3 N ILE B 149 ? N ILE B 147 O MET B 210 ? O MET B 208 J 3 4 O THR B 207 ? O THR B 205 N ASP B 202 ? N ASP B 200 K 1 2 N VAL B 141 ? N VAL B 139 O THR B 243 ? O THR B 241 K 2 3 O VAL B 242 ? O VAL B 240 N ALA B 221 ? N ALA B 219 K 3 4 O ALA B 226 ? O ALA B 224 N HIS B 164 ? N HIS B 162 K 4 5 N LYS B 167 ? N LYS B 165 O GLU B 175 ? O GLU B 173 K 5 6 N TRP B 179 ? N TRP B 177 O LYS B 188 ? O LYS B 186 L 1 2 N VAL B 141 ? N VAL B 139 O THR B 243 ? O THR B 241 L 2 3 O VAL B 242 ? O VAL B 240 N ALA B 221 ? N ALA B 219 L 3 4 N ARG B 227 ? N ARG B 225 O ASP B 234 ? O ASP B 232 # _database_PDB_matrix.entry_id 3WBD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3WBD _atom_sites.fract_transf_matrix[1][1] 0.006204 _atom_sites.fract_transf_matrix[1][2] 0.003582 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007164 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021794 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 0 SER SER A . n A 1 3 ASP 3 1 1 ASP ASP A . n A 1 4 VAL 4 2 2 VAL VAL A . n A 1 5 VAL 5 3 3 VAL VAL A . n A 1 6 MET 6 4 4 MET MET A . n A 1 7 THR 7 5 5 THR THR A . n A 1 8 GLN 8 6 6 GLN GLN A . n A 1 9 THR 9 7 7 THR THR A . n A 1 10 PRO 10 8 8 PRO PRO A . n A 1 11 LEU 11 9 9 LEU LEU A . n A 1 12 SER 12 10 10 SER SER A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 PRO 14 12 12 PRO PRO A . n A 1 15 VAL 15 13 13 VAL VAL A . n A 1 16 SER 16 14 14 SER SER A . n A 1 17 LEU 17 15 15 LEU LEU A . n A 1 18 GLY 18 16 16 GLY GLY A . n A 1 19 ASP 19 17 17 ASP ASP A . n A 1 20 GLN 20 18 18 GLN GLN A . n A 1 21 ALA 21 19 19 ALA ALA A . n A 1 22 SER 22 20 20 SER SER A . n A 1 23 ILE 23 21 21 ILE ILE A . n A 1 24 SER 24 22 22 SER SER A . n A 1 25 CYS 25 23 23 CYS CYS A . n A 1 26 ARG 26 24 24 ARG ARG A . n A 1 27 SER 27 25 25 SER SER A . n A 1 28 SER 28 26 26 SER SER A . n A 1 29 GLN 29 27 27 GLN GLN A . n A 1 30 SER 30 28 28 SER SER A . n A 1 31 LEU 31 29 29 LEU LEU A . n A 1 32 VAL 32 30 30 VAL VAL A . n A 1 33 HIS 33 31 31 HIS HIS A . n A 1 34 SER 34 32 32 SER SER A . n A 1 35 ASN 35 33 33 ASN ASN A . n A 1 36 GLY 36 34 34 GLY GLY A . n A 1 37 ASN 37 35 35 ASN ASN A . n A 1 38 THR 38 36 36 THR THR A . n A 1 39 TYR 39 37 37 TYR TYR A . n A 1 40 LEU 40 38 38 LEU LEU A . n A 1 41 TYR 41 39 39 TYR TYR A . n A 1 42 TRP 42 40 40 TRP TRP A . n A 1 43 TYR 43 41 41 TYR TYR A . n A 1 44 LEU 44 42 42 LEU LEU A . n A 1 45 GLN 45 43 43 GLN GLN A . n A 1 46 LYS 46 44 44 LYS LYS A . n A 1 47 PRO 47 45 45 PRO PRO A . n A 1 48 GLY 48 46 46 GLY GLY A . n A 1 49 GLN 49 47 47 GLN GLN A . n A 1 50 SER 50 48 48 SER SER A . n A 1 51 PRO 51 49 49 PRO PRO A . n A 1 52 LYS 52 50 50 LYS LYS A . n A 1 53 PRO 53 51 51 PRO PRO A . n A 1 54 LEU 54 52 52 LEU LEU A . n A 1 55 ILE 55 53 53 ILE ILE A . n A 1 56 TYR 56 54 54 TYR TYR A . n A 1 57 ARG 57 55 55 ARG ARG A . n A 1 58 VAL 58 56 56 VAL VAL A . n A 1 59 SER 59 57 57 SER SER A . n A 1 60 ASN 60 58 58 ASN ASN A . n A 1 61 ARG 61 59 59 ARG ARG A . n A 1 62 PHE 62 60 60 PHE PHE A . n A 1 63 SER 63 61 61 SER SER A . n A 1 64 GLY 64 62 62 GLY GLY A . n A 1 65 VAL 65 63 63 VAL VAL A . n A 1 66 PRO 66 64 64 PRO PRO A . n A 1 67 ASP 67 65 65 ASP ASP A . n A 1 68 ARG 68 66 66 ARG ARG A . n A 1 69 PHE 69 67 67 PHE PHE A . n A 1 70 SER 70 68 68 SER SER A . n A 1 71 GLY 71 69 69 GLY GLY A . n A 1 72 SER 72 70 70 SER SER A . n A 1 73 GLY 73 71 71 GLY GLY A . n A 1 74 SER 74 72 72 SER SER A . n A 1 75 GLY 75 73 73 GLY GLY A . n A 1 76 THR 76 74 74 THR THR A . n A 1 77 ASP 77 75 75 ASP ASP A . n A 1 78 PHE 78 76 76 PHE PHE A . n A 1 79 THR 79 77 77 THR THR A . n A 1 80 LEU 80 78 78 LEU LEU A . n A 1 81 LYS 81 79 79 LYS LYS A . n A 1 82 ILE 82 80 80 ILE ILE A . n A 1 83 SER 83 81 81 SER SER A . n A 1 84 ARG 84 82 82 ARG ARG A . n A 1 85 VAL 85 83 83 VAL VAL A . n A 1 86 GLU 86 84 84 GLU GLU A . n A 1 87 ALA 87 85 85 ALA ALA A . n A 1 88 GLU 88 86 86 GLU GLU A . n A 1 89 ASP 89 87 87 ASP ASP A . n A 1 90 LEU 90 88 88 LEU LEU A . n A 1 91 GLY 91 89 89 GLY GLY A . n A 1 92 VAL 92 90 90 VAL VAL A . n A 1 93 TYR 93 91 91 TYR TYR A . n A 1 94 PHE 94 92 92 PHE PHE A . n A 1 95 CYS 95 93 93 CYS CYS A . n A 1 96 PHE 96 94 94 PHE PHE A . n A 1 97 GLN 97 95 95 GLN GLN A . n A 1 98 GLY 98 96 96 GLY GLY A . n A 1 99 THR 99 97 97 THR THR A . n A 1 100 HIS 100 98 98 HIS HIS A . n A 1 101 VAL 101 99 99 VAL VAL A . n A 1 102 PRO 102 100 100 PRO PRO A . n A 1 103 TYR 103 101 101 TYR TYR A . n A 1 104 THR 104 102 102 THR THR A . n A 1 105 PHE 105 103 103 PHE PHE A . n A 1 106 GLY 106 104 104 GLY GLY A . n A 1 107 GLY 107 105 105 GLY GLY A . n A 1 108 GLY 108 106 106 GLY GLY A . n A 1 109 THR 109 107 107 THR THR A . n A 1 110 ARG 110 108 108 ARG ARG A . n A 1 111 LEU 111 109 109 LEU LEU A . n A 1 112 GLU 112 110 110 GLU GLU A . n A 1 113 ILE 113 111 ? ? ? A . n A 1 114 LYS 114 112 ? ? ? A . n A 1 115 GLY 115 113 ? ? ? A . n A 1 116 GLY 116 114 ? ? ? A . n A 1 117 GLY 117 115 ? ? ? A . n A 1 118 GLY 118 116 ? ? ? A . n A 1 119 SER 119 117 ? ? ? A . n A 1 120 GLY 120 118 ? ? ? A . n A 1 121 GLY 121 119 ? ? ? A . n A 1 122 GLY 122 120 ? ? ? A . n A 1 123 GLY 123 121 ? ? ? A . n A 1 124 SER 124 122 ? ? ? A . n A 1 125 GLY 125 123 ? ? ? A . n A 1 126 GLY 126 124 ? ? ? A . n A 1 127 GLY 127 125 125 GLY GLY A . n A 1 128 GLY 128 126 126 GLY GLY A . n A 1 129 SER 129 127 127 SER SER A . n A 1 130 GLN 130 128 128 GLN GLN A . n A 1 131 ILE 131 129 129 ILE ILE A . n A 1 132 GLN 132 130 130 GLN GLN A . n A 1 133 LEU 133 131 131 LEU LEU A . n A 1 134 GLN 134 132 132 GLN GLN A . n A 1 135 GLN 135 133 133 GLN GLN A . n A 1 136 SER 136 134 134 SER SER A . n A 1 137 GLY 137 135 135 GLY GLY A . n A 1 138 PRO 138 136 136 PRO PRO A . n A 1 139 GLU 139 137 137 GLU GLU A . n A 1 140 LEU 140 138 138 LEU LEU A . n A 1 141 VAL 141 139 139 VAL VAL A . n A 1 142 ARG 142 140 140 ARG ARG A . n A 1 143 PRO 143 141 141 PRO PRO A . n A 1 144 GLY 144 142 142 GLY GLY A . n A 1 145 ALA 145 143 143 ALA ALA A . n A 1 146 SER 146 144 144 SER SER A . n A 1 147 VAL 147 145 145 VAL VAL A . n A 1 148 LYS 148 146 146 LYS LYS A . n A 1 149 ILE 149 147 147 ILE ILE A . n A 1 150 SER 150 148 148 SER SER A . n A 1 151 CYS 151 149 149 CYS CYS A . n A 1 152 LYS 152 150 150 LYS LYS A . n A 1 153 ALA 153 151 151 ALA ALA A . n A 1 154 SER 154 152 152 SER SER A . n A 1 155 GLY 155 153 153 GLY GLY A . n A 1 156 TYR 156 154 154 TYR TYR A . n A 1 157 THR 157 155 155 THR THR A . n A 1 158 PHE 158 156 156 PHE PHE A . n A 1 159 THR 159 157 157 THR THR A . n A 1 160 ASP 160 158 158 ASP ASP A . n A 1 161 TYR 161 159 159 TYR TYR A . n A 1 162 TYR 162 160 160 TYR TYR A . n A 1 163 ILE 163 161 161 ILE ILE A . n A 1 164 HIS 164 162 162 HIS HIS A . n A 1 165 TRP 165 163 163 TRP TRP A . n A 1 166 VAL 166 164 164 VAL VAL A . n A 1 167 LYS 167 165 165 LYS LYS A . n A 1 168 GLN 168 166 166 GLN GLN A . n A 1 169 ARG 169 167 167 ARG ARG A . n A 1 170 PRO 170 168 168 PRO PRO A . n A 1 171 GLY 171 169 169 GLY GLY A . n A 1 172 GLU 172 170 170 GLU GLU A . n A 1 173 GLY 173 171 171 GLY GLY A . n A 1 174 LEU 174 172 172 LEU LEU A . n A 1 175 GLU 175 173 173 GLU GLU A . n A 1 176 TRP 176 174 174 TRP TRP A . n A 1 177 ILE 177 175 175 ILE ILE A . n A 1 178 GLY 178 176 176 GLY GLY A . n A 1 179 TRP 179 177 177 TRP TRP A . n A 1 180 ILE 180 178 178 ILE ILE A . n A 1 181 TYR 181 179 179 TYR TYR A . n A 1 182 PRO 182 180 180 PRO PRO A . n A 1 183 GLY 183 181 181 GLY GLY A . n A 1 184 SER 184 182 182 SER SER A . n A 1 185 GLY 185 183 183 GLY GLY A . n A 1 186 ASN 186 184 184 ASN ASN A . n A 1 187 THR 187 185 185 THR THR A . n A 1 188 LYS 188 186 186 LYS LYS A . n A 1 189 TYR 189 187 187 TYR TYR A . n A 1 190 ASN 190 188 188 ASN ASN A . n A 1 191 GLU 191 189 189 GLU GLU A . n A 1 192 LYS 192 190 190 LYS LYS A . n A 1 193 PHE 193 191 191 PHE PHE A . n A 1 194 LYS 194 192 192 LYS LYS A . n A 1 195 GLY 195 193 193 GLY GLY A . n A 1 196 LYS 196 194 194 LYS LYS A . n A 1 197 ALA 197 195 195 ALA ALA A . n A 1 198 THR 198 196 196 THR THR A . n A 1 199 LEU 199 197 197 LEU LEU A . n A 1 200 THR 200 198 198 THR THR A . n A 1 201 VAL 201 199 199 VAL VAL A . n A 1 202 ASP 202 200 200 ASP ASP A . n A 1 203 THR 203 201 201 THR THR A . n A 1 204 SER 204 202 202 SER SER A . n A 1 205 SER 205 203 203 SER SER A . n A 1 206 SER 206 204 204 SER SER A . n A 1 207 THR 207 205 205 THR THR A . n A 1 208 ALA 208 206 206 ALA ALA A . n A 1 209 TYR 209 207 207 TYR TYR A . n A 1 210 MET 210 208 208 MET MET A . n A 1 211 GLN 211 209 209 GLN GLN A . n A 1 212 LEU 212 210 210 LEU LEU A . n A 1 213 SER 213 211 211 SER SER A . n A 1 214 SER 214 212 212 SER SER A . n A 1 215 LEU 215 213 213 LEU LEU A . n A 1 216 THR 216 214 214 THR THR A . n A 1 217 SER 217 215 215 SER SER A . n A 1 218 GLU 218 216 216 GLU GLU A . n A 1 219 ASP 219 217 217 ASP ASP A . n A 1 220 SER 220 218 218 SER SER A . n A 1 221 ALA 221 219 219 ALA ALA A . n A 1 222 VAL 222 220 220 VAL VAL A . n A 1 223 TYR 223 221 221 TYR TYR A . n A 1 224 PHE 224 222 222 PHE PHE A . n A 1 225 CYS 225 223 223 CYS CYS A . n A 1 226 ALA 226 224 224 ALA ALA A . n A 1 227 ARG 227 225 225 ARG ARG A . n A 1 228 GLY 228 226 226 GLY GLY A . n A 1 229 GLY 229 227 227 GLY GLY A . n A 1 230 LYS 230 228 228 LYS LYS A . n A 1 231 PHE 231 229 229 PHE PHE A . n A 1 232 ALA 232 230 230 ALA ALA A . n A 1 233 MET 233 231 231 MET MET A . n A 1 234 ASP 234 232 232 ASP ASP A . n A 1 235 TYR 235 233 233 TYR TYR A . n A 1 236 TRP 236 234 234 TRP TRP A . n A 1 237 GLY 237 235 235 GLY GLY A . n A 1 238 GLN 238 236 236 GLN GLN A . n A 1 239 GLY 239 237 237 GLY GLY A . n A 1 240 THR 240 238 238 THR THR A . n A 1 241 SER 241 239 239 SER SER A . n A 1 242 VAL 242 240 240 VAL VAL A . n A 1 243 THR 243 241 241 THR THR A . n A 1 244 VAL 244 242 242 VAL VAL A . n A 1 245 SER 245 243 243 SER SER A . n A 1 246 SER 246 244 244 SER SER A . n B 1 1 GLY 1 -1 ? ? ? B . n B 1 2 SER 2 0 0 SER SER B . n B 1 3 ASP 3 1 1 ASP ASP B . n B 1 4 VAL 4 2 2 VAL VAL B . n B 1 5 VAL 5 3 3 VAL VAL B . n B 1 6 MET 6 4 4 MET MET B . n B 1 7 THR 7 5 5 THR THR B . n B 1 8 GLN 8 6 6 GLN GLN B . n B 1 9 THR 9 7 7 THR THR B . n B 1 10 PRO 10 8 8 PRO PRO B . n B 1 11 LEU 11 9 9 LEU LEU B . n B 1 12 SER 12 10 10 SER SER B . n B 1 13 LEU 13 11 11 LEU LEU B . n B 1 14 PRO 14 12 12 PRO PRO B . n B 1 15 VAL 15 13 13 VAL VAL B . n B 1 16 SER 16 14 14 SER SER B . n B 1 17 LEU 17 15 15 LEU LEU B . n B 1 18 GLY 18 16 16 GLY GLY B . n B 1 19 ASP 19 17 17 ASP ASP B . n B 1 20 GLN 20 18 18 GLN GLN B . n B 1 21 ALA 21 19 19 ALA ALA B . n B 1 22 SER 22 20 20 SER SER B . n B 1 23 ILE 23 21 21 ILE ILE B . n B 1 24 SER 24 22 22 SER SER B . n B 1 25 CYS 25 23 23 CYS CYS B . n B 1 26 ARG 26 24 24 ARG ARG B . n B 1 27 SER 27 25 25 SER SER B . n B 1 28 SER 28 26 26 SER SER B . n B 1 29 GLN 29 27 27 GLN GLN B . n B 1 30 SER 30 28 28 SER SER B . n B 1 31 LEU 31 29 29 LEU LEU B . n B 1 32 VAL 32 30 30 VAL VAL B . n B 1 33 HIS 33 31 31 HIS HIS B . n B 1 34 SER 34 32 32 SER SER B . n B 1 35 ASN 35 33 33 ASN ASN B . n B 1 36 GLY 36 34 34 GLY GLY B . n B 1 37 ASN 37 35 35 ASN ASN B . n B 1 38 THR 38 36 36 THR THR B . n B 1 39 TYR 39 37 37 TYR TYR B . n B 1 40 LEU 40 38 38 LEU LEU B . n B 1 41 TYR 41 39 39 TYR TYR B . n B 1 42 TRP 42 40 40 TRP TRP B . n B 1 43 TYR 43 41 41 TYR TYR B . n B 1 44 LEU 44 42 42 LEU LEU B . n B 1 45 GLN 45 43 43 GLN GLN B . n B 1 46 LYS 46 44 44 LYS LYS B . n B 1 47 PRO 47 45 45 PRO PRO B . n B 1 48 GLY 48 46 46 GLY GLY B . n B 1 49 GLN 49 47 47 GLN GLN B . n B 1 50 SER 50 48 48 SER SER B . n B 1 51 PRO 51 49 49 PRO PRO B . n B 1 52 LYS 52 50 50 LYS LYS B . n B 1 53 PRO 53 51 51 PRO PRO B . n B 1 54 LEU 54 52 52 LEU LEU B . n B 1 55 ILE 55 53 53 ILE ILE B . n B 1 56 TYR 56 54 54 TYR TYR B . n B 1 57 ARG 57 55 55 ARG ARG B . n B 1 58 VAL 58 56 56 VAL VAL B . n B 1 59 SER 59 57 57 SER SER B . n B 1 60 ASN 60 58 58 ASN ASN B . n B 1 61 ARG 61 59 59 ARG ARG B . n B 1 62 PHE 62 60 60 PHE PHE B . n B 1 63 SER 63 61 61 SER SER B . n B 1 64 GLY 64 62 62 GLY GLY B . n B 1 65 VAL 65 63 63 VAL VAL B . n B 1 66 PRO 66 64 64 PRO PRO B . n B 1 67 ASP 67 65 65 ASP ASP B . n B 1 68 ARG 68 66 66 ARG ARG B . n B 1 69 PHE 69 67 67 PHE PHE B . n B 1 70 SER 70 68 68 SER SER B . n B 1 71 GLY 71 69 69 GLY GLY B . n B 1 72 SER 72 70 70 SER SER B . n B 1 73 GLY 73 71 71 GLY GLY B . n B 1 74 SER 74 72 72 SER SER B . n B 1 75 GLY 75 73 73 GLY GLY B . n B 1 76 THR 76 74 74 THR THR B . n B 1 77 ASP 77 75 75 ASP ASP B . n B 1 78 PHE 78 76 76 PHE PHE B . n B 1 79 THR 79 77 77 THR THR B . n B 1 80 LEU 80 78 78 LEU LEU B . n B 1 81 LYS 81 79 79 LYS LYS B . n B 1 82 ILE 82 80 80 ILE ILE B . n B 1 83 SER 83 81 81 SER SER B . n B 1 84 ARG 84 82 82 ARG ARG B . n B 1 85 VAL 85 83 83 VAL VAL B . n B 1 86 GLU 86 84 84 GLU GLU B . n B 1 87 ALA 87 85 85 ALA ALA B . n B 1 88 GLU 88 86 86 GLU GLU B . n B 1 89 ASP 89 87 87 ASP ASP B . n B 1 90 LEU 90 88 88 LEU LEU B . n B 1 91 GLY 91 89 89 GLY GLY B . n B 1 92 VAL 92 90 90 VAL VAL B . n B 1 93 TYR 93 91 91 TYR TYR B . n B 1 94 PHE 94 92 92 PHE PHE B . n B 1 95 CYS 95 93 93 CYS CYS B . n B 1 96 PHE 96 94 94 PHE PHE B . n B 1 97 GLN 97 95 95 GLN GLN B . n B 1 98 GLY 98 96 96 GLY GLY B . n B 1 99 THR 99 97 97 THR THR B . n B 1 100 HIS 100 98 98 HIS HIS B . n B 1 101 VAL 101 99 99 VAL VAL B . n B 1 102 PRO 102 100 100 PRO PRO B . n B 1 103 TYR 103 101 101 TYR TYR B . n B 1 104 THR 104 102 102 THR THR B . n B 1 105 PHE 105 103 103 PHE PHE B . n B 1 106 GLY 106 104 104 GLY GLY B . n B 1 107 GLY 107 105 105 GLY GLY B . n B 1 108 GLY 108 106 106 GLY GLY B . n B 1 109 THR 109 107 107 THR THR B . n B 1 110 ARG 110 108 108 ARG ARG B . n B 1 111 LEU 111 109 109 LEU LEU B . n B 1 112 GLU 112 110 110 GLU GLU B . n B 1 113 ILE 113 111 111 ILE ILE B . n B 1 114 LYS 114 112 112 LYS LYS B . n B 1 115 GLY 115 113 ? ? ? B . n B 1 116 GLY 116 114 ? ? ? B . n B 1 117 GLY 117 115 ? ? ? B . n B 1 118 GLY 118 116 ? ? ? B . n B 1 119 SER 119 117 ? ? ? B . n B 1 120 GLY 120 118 ? ? ? B . n B 1 121 GLY 121 119 ? ? ? B . n B 1 122 GLY 122 120 ? ? ? B . n B 1 123 GLY 123 121 ? ? ? B . n B 1 124 SER 124 122 ? ? ? B . n B 1 125 GLY 125 123 ? ? ? B . n B 1 126 GLY 126 124 ? ? ? B . n B 1 127 GLY 127 125 ? ? ? B . n B 1 128 GLY 128 126 ? ? ? B . n B 1 129 SER 129 127 ? ? ? B . n B 1 130 GLN 130 128 128 GLN GLN B . n B 1 131 ILE 131 129 129 ILE ILE B . n B 1 132 GLN 132 130 130 GLN GLN B . n B 1 133 LEU 133 131 131 LEU LEU B . n B 1 134 GLN 134 132 132 GLN GLN B . n B 1 135 GLN 135 133 133 GLN GLN B . n B 1 136 SER 136 134 134 SER SER B . n B 1 137 GLY 137 135 135 GLY GLY B . n B 1 138 PRO 138 136 136 PRO PRO B . n B 1 139 GLU 139 137 137 GLU GLU B . n B 1 140 LEU 140 138 138 LEU LEU B . n B 1 141 VAL 141 139 139 VAL VAL B . n B 1 142 ARG 142 140 140 ARG ARG B . n B 1 143 PRO 143 141 141 PRO PRO B . n B 1 144 GLY 144 142 142 GLY GLY B . n B 1 145 ALA 145 143 143 ALA ALA B . n B 1 146 SER 146 144 144 SER SER B . n B 1 147 VAL 147 145 145 VAL VAL B . n B 1 148 LYS 148 146 146 LYS LYS B . n B 1 149 ILE 149 147 147 ILE ILE B . n B 1 150 SER 150 148 148 SER SER B . n B 1 151 CYS 151 149 149 CYS CYS B . n B 1 152 LYS 152 150 150 LYS LYS B . n B 1 153 ALA 153 151 151 ALA ALA B . n B 1 154 SER 154 152 152 SER SER B . n B 1 155 GLY 155 153 153 GLY GLY B . n B 1 156 TYR 156 154 154 TYR TYR B . n B 1 157 THR 157 155 155 THR THR B . n B 1 158 PHE 158 156 156 PHE PHE B . n B 1 159 THR 159 157 157 THR THR B . n B 1 160 ASP 160 158 158 ASP ASP B . n B 1 161 TYR 161 159 159 TYR TYR B . n B 1 162 TYR 162 160 160 TYR TYR B . n B 1 163 ILE 163 161 161 ILE ILE B . n B 1 164 HIS 164 162 162 HIS HIS B . n B 1 165 TRP 165 163 163 TRP TRP B . n B 1 166 VAL 166 164 164 VAL VAL B . n B 1 167 LYS 167 165 165 LYS LYS B . n B 1 168 GLN 168 166 166 GLN GLN B . n B 1 169 ARG 169 167 167 ARG ARG B . n B 1 170 PRO 170 168 168 PRO PRO B . n B 1 171 GLY 171 169 169 GLY GLY B . n B 1 172 GLU 172 170 170 GLU GLU B . n B 1 173 GLY 173 171 171 GLY GLY B . n B 1 174 LEU 174 172 172 LEU LEU B . n B 1 175 GLU 175 173 173 GLU GLU B . n B 1 176 TRP 176 174 174 TRP TRP B . n B 1 177 ILE 177 175 175 ILE ILE B . n B 1 178 GLY 178 176 176 GLY GLY B . n B 1 179 TRP 179 177 177 TRP TRP B . n B 1 180 ILE 180 178 178 ILE ILE B . n B 1 181 TYR 181 179 179 TYR TYR B . n B 1 182 PRO 182 180 180 PRO PRO B . n B 1 183 GLY 183 181 181 GLY GLY B . n B 1 184 SER 184 182 182 SER SER B . n B 1 185 GLY 185 183 183 GLY GLY B . n B 1 186 ASN 186 184 184 ASN ASN B . n B 1 187 THR 187 185 185 THR THR B . n B 1 188 LYS 188 186 186 LYS LYS B . n B 1 189 TYR 189 187 187 TYR TYR B . n B 1 190 ASN 190 188 188 ASN ASN B . n B 1 191 GLU 191 189 189 GLU GLU B . n B 1 192 LYS 192 190 190 LYS LYS B . n B 1 193 PHE 193 191 191 PHE PHE B . n B 1 194 LYS 194 192 192 LYS LYS B . n B 1 195 GLY 195 193 193 GLY GLY B . n B 1 196 LYS 196 194 194 LYS LYS B . n B 1 197 ALA 197 195 195 ALA ALA B . n B 1 198 THR 198 196 196 THR THR B . n B 1 199 LEU 199 197 197 LEU LEU B . n B 1 200 THR 200 198 198 THR THR B . n B 1 201 VAL 201 199 199 VAL VAL B . n B 1 202 ASP 202 200 200 ASP ASP B . n B 1 203 THR 203 201 201 THR THR B . n B 1 204 SER 204 202 202 SER SER B . n B 1 205 SER 205 203 203 SER SER B . n B 1 206 SER 206 204 204 SER SER B . n B 1 207 THR 207 205 205 THR THR B . n B 1 208 ALA 208 206 206 ALA ALA B . n B 1 209 TYR 209 207 207 TYR TYR B . n B 1 210 MET 210 208 208 MET MET B . n B 1 211 GLN 211 209 209 GLN GLN B . n B 1 212 LEU 212 210 210 LEU LEU B . n B 1 213 SER 213 211 211 SER SER B . n B 1 214 SER 214 212 212 SER SER B . n B 1 215 LEU 215 213 213 LEU LEU B . n B 1 216 THR 216 214 214 THR THR B . n B 1 217 SER 217 215 215 SER SER B . n B 1 218 GLU 218 216 216 GLU GLU B . n B 1 219 ASP 219 217 217 ASP ASP B . n B 1 220 SER 220 218 218 SER SER B . n B 1 221 ALA 221 219 219 ALA ALA B . n B 1 222 VAL 222 220 220 VAL VAL B . n B 1 223 TYR 223 221 221 TYR TYR B . n B 1 224 PHE 224 222 222 PHE PHE B . n B 1 225 CYS 225 223 223 CYS CYS B . n B 1 226 ALA 226 224 224 ALA ALA B . n B 1 227 ARG 227 225 225 ARG ARG B . n B 1 228 GLY 228 226 226 GLY GLY B . n B 1 229 GLY 229 227 227 GLY GLY B . n B 1 230 LYS 230 228 228 LYS LYS B . n B 1 231 PHE 231 229 229 PHE PHE B . n B 1 232 ALA 232 230 230 ALA ALA B . n B 1 233 MET 233 231 231 MET MET B . n B 1 234 ASP 234 232 232 ASP ASP B . n B 1 235 TYR 235 233 233 TYR TYR B . n B 1 236 TRP 236 234 234 TRP TRP B . n B 1 237 GLY 237 235 235 GLY GLY B . n B 1 238 GLN 238 236 236 GLN GLN B . n B 1 239 GLY 239 237 237 GLY GLY B . n B 1 240 THR 240 238 238 THR THR B . n B 1 241 SER 241 239 239 SER SER B . n B 1 242 VAL 242 240 240 VAL VAL B . n B 1 243 THR 243 241 241 THR THR B . n B 1 244 VAL 244 242 242 VAL VAL B . n B 1 245 SER 245 243 243 SER SER B . n B 1 246 SER 246 244 244 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 FLC 1 2001 2001 FLC FLC A . E 4 HOH 1 2101 37 HOH HOH A . E 4 HOH 2 2102 38 HOH HOH A . E 4 HOH 3 2103 39 HOH HOH A . E 4 HOH 4 2104 42 HOH HOH A . E 4 HOH 5 2105 44 HOH HOH A . E 4 HOH 6 2106 45 HOH HOH A . E 4 HOH 7 2107 46 HOH HOH A . E 4 HOH 8 2108 47 HOH HOH A . E 4 HOH 9 2109 48 HOH HOH A . E 4 HOH 10 2110 49 HOH HOH A . E 4 HOH 11 2111 50 HOH HOH A . E 4 HOH 12 2112 51 HOH HOH A . E 4 HOH 13 2113 52 HOH HOH A . E 4 HOH 14 2114 53 HOH HOH A . E 4 HOH 15 2115 54 HOH HOH A . E 4 HOH 16 2116 55 HOH HOH A . E 4 HOH 17 2117 56 HOH HOH A . E 4 HOH 18 2118 57 HOH HOH A . E 4 HOH 19 2119 58 HOH HOH A . E 4 HOH 20 2120 59 HOH HOH A . E 4 HOH 21 2121 61 HOH HOH A . E 4 HOH 22 2122 64 HOH HOH A . E 4 HOH 23 2123 65 HOH HOH A . E 4 HOH 24 2124 66 HOH HOH A . E 4 HOH 25 2125 67 HOH HOH A . E 4 HOH 26 2126 68 HOH HOH A . E 4 HOH 27 2127 69 HOH HOH A . E 4 HOH 28 2128 70 HOH HOH A . E 4 HOH 29 2129 71 HOH HOH A . E 4 HOH 30 2130 72 HOH HOH A . E 4 HOH 31 2131 73 HOH HOH A . E 4 HOH 32 2132 74 HOH HOH A . E 4 HOH 33 2133 75 HOH HOH A . E 4 HOH 34 2134 78 HOH HOH A . E 4 HOH 35 2135 79 HOH HOH A . E 4 HOH 36 2136 80 HOH HOH A . E 4 HOH 37 2137 81 HOH HOH A . E 4 HOH 38 2138 86 HOH HOH A . E 4 HOH 39 2139 87 HOH HOH A . E 4 HOH 40 2140 88 HOH HOH A . E 4 HOH 41 2141 89 HOH HOH A . E 4 HOH 42 2142 90 HOH HOH A . E 4 HOH 43 2143 93 HOH HOH A . E 4 HOH 44 2144 94 HOH HOH A . E 4 HOH 45 2145 95 HOH HOH A . E 4 HOH 46 2146 99 HOH HOH A . E 4 HOH 47 2147 100 HOH HOH A . E 4 HOH 48 2148 101 HOH HOH A . E 4 HOH 49 2149 102 HOH HOH A . E 4 HOH 50 2150 104 HOH HOH A . E 4 HOH 51 2151 105 HOH HOH A . E 4 HOH 52 2152 106 HOH HOH A . E 4 HOH 53 2153 107 HOH HOH A . E 4 HOH 54 2154 108 HOH HOH A . E 4 HOH 55 2155 109 HOH HOH A . E 4 HOH 56 2156 110 HOH HOH A . E 4 HOH 57 2157 111 HOH HOH A . E 4 HOH 58 2158 112 HOH HOH A . E 4 HOH 59 2159 113 HOH HOH A . E 4 HOH 60 2160 114 HOH HOH A . E 4 HOH 61 2161 115 HOH HOH A . E 4 HOH 62 2162 116 HOH HOH A . E 4 HOH 63 2163 117 HOH HOH A . E 4 HOH 64 2164 118 HOH HOH A . E 4 HOH 65 2165 119 HOH HOH A . E 4 HOH 66 2166 120 HOH HOH A . E 4 HOH 67 2167 121 HOH HOH A . E 4 HOH 68 2168 122 HOH HOH A . E 4 HOH 69 2169 123 HOH HOH A . E 4 HOH 70 2170 125 HOH HOH A . E 4 HOH 71 2171 126 HOH HOH A . E 4 HOH 72 2172 127 HOH HOH A . E 4 HOH 73 2173 128 HOH HOH A . E 4 HOH 74 2174 129 HOH HOH A . E 4 HOH 75 2175 130 HOH HOH A . E 4 HOH 76 2176 131 HOH HOH A . E 4 HOH 77 2177 143 HOH HOH A . E 4 HOH 78 2178 144 HOH HOH A . E 4 HOH 79 2179 145 HOH HOH A . E 4 HOH 80 2180 146 HOH HOH A . E 4 HOH 81 2181 147 HOH HOH A . E 4 HOH 82 2182 148 HOH HOH A . E 4 HOH 83 2183 149 HOH HOH A . E 4 HOH 84 2184 150 HOH HOH A . E 4 HOH 85 2185 151 HOH HOH A . E 4 HOH 86 2186 152 HOH HOH A . E 4 HOH 87 2187 153 HOH HOH A . E 4 HOH 88 2188 154 HOH HOH A . E 4 HOH 89 2189 155 HOH HOH A . E 4 HOH 90 2190 156 HOH HOH A . E 4 HOH 91 2191 157 HOH HOH A . E 4 HOH 92 2192 158 HOH HOH A . F 4 HOH 1 401 1 HOH HOH B . F 4 HOH 2 402 2 HOH HOH B . F 4 HOH 3 403 3 HOH HOH B . F 4 HOH 4 404 4 HOH HOH B . F 4 HOH 5 405 5 HOH HOH B . F 4 HOH 6 406 6 HOH HOH B . F 4 HOH 7 407 7 HOH HOH B . F 4 HOH 8 408 8 HOH HOH B . F 4 HOH 9 409 9 HOH HOH B . F 4 HOH 10 410 10 HOH HOH B . F 4 HOH 11 411 11 HOH HOH B . F 4 HOH 12 412 12 HOH HOH B . F 4 HOH 13 413 13 HOH HOH B . F 4 HOH 14 414 14 HOH HOH B . F 4 HOH 15 415 15 HOH HOH B . F 4 HOH 16 416 16 HOH HOH B . F 4 HOH 17 417 17 HOH HOH B . F 4 HOH 18 418 18 HOH HOH B . F 4 HOH 19 419 19 HOH HOH B . F 4 HOH 20 420 20 HOH HOH B . F 4 HOH 21 421 21 HOH HOH B . F 4 HOH 22 422 22 HOH HOH B . F 4 HOH 23 423 23 HOH HOH B . F 4 HOH 24 424 24 HOH HOH B . F 4 HOH 25 425 25 HOH HOH B . F 4 HOH 26 426 26 HOH HOH B . F 4 HOH 27 427 27 HOH HOH B . F 4 HOH 28 428 28 HOH HOH B . F 4 HOH 29 429 29 HOH HOH B . F 4 HOH 30 430 30 HOH HOH B . F 4 HOH 31 431 31 HOH HOH B . F 4 HOH 32 432 32 HOH HOH B . F 4 HOH 33 433 33 HOH HOH B . F 4 HOH 34 434 34 HOH HOH B . F 4 HOH 35 435 35 HOH HOH B . F 4 HOH 36 436 36 HOH HOH B . F 4 HOH 37 437 40 HOH HOH B . F 4 HOH 38 438 41 HOH HOH B . F 4 HOH 39 439 43 HOH HOH B . F 4 HOH 40 440 60 HOH HOH B . F 4 HOH 41 441 62 HOH HOH B . F 4 HOH 42 442 63 HOH HOH B . F 4 HOH 43 443 76 HOH HOH B . F 4 HOH 44 444 77 HOH HOH B . F 4 HOH 45 445 82 HOH HOH B . F 4 HOH 46 446 83 HOH HOH B . F 4 HOH 47 447 84 HOH HOH B . F 4 HOH 48 448 85 HOH HOH B . F 4 HOH 49 449 91 HOH HOH B . F 4 HOH 50 450 92 HOH HOH B . F 4 HOH 51 451 96 HOH HOH B . F 4 HOH 52 452 97 HOH HOH B . F 4 HOH 53 453 98 HOH HOH B . F 4 HOH 54 454 103 HOH HOH B . F 4 HOH 55 455 124 HOH HOH B . F 4 HOH 56 456 132 HOH HOH B . F 4 HOH 57 457 133 HOH HOH B . F 4 HOH 58 458 134 HOH HOH B . F 4 HOH 59 459 135 HOH HOH B . F 4 HOH 60 460 136 HOH HOH B . F 4 HOH 61 461 137 HOH HOH B . F 4 HOH 62 462 138 HOH HOH B . F 4 HOH 63 463 139 HOH HOH B . F 4 HOH 64 464 140 HOH HOH B . F 4 HOH 65 465 141 HOH HOH B . F 4 HOH 66 466 142 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,E 2 1 B,C,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-16 2 'Structure model' 1 1 2014-04-02 3 'Structure model' 1 2 2014-04-16 4 'Structure model' 1 3 2017-11-22 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Source and taxonomy' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Atomic model' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Structure summary' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Refinement description' 11 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' atom_site 3 5 'Structure model' chem_comp 4 5 'Structure model' entity 5 5 'Structure model' pdbx_branch_scheme 6 5 'Structure model' pdbx_chem_comp_identifier 7 5 'Structure model' pdbx_entity_branch 8 5 'Structure model' pdbx_entity_branch_descriptor 9 5 'Structure model' pdbx_entity_branch_link 10 5 'Structure model' pdbx_entity_branch_list 11 5 'Structure model' pdbx_entity_nonpoly 12 5 'Structure model' pdbx_nonpoly_scheme 13 5 'Structure model' pdbx_struct_assembly_gen 14 5 'Structure model' struct_asym 15 5 'Structure model' struct_conn 16 5 'Structure model' struct_site 17 5 'Structure model' struct_site_gen 18 6 'Structure model' chem_comp 19 6 'Structure model' chem_comp_atom 20 6 'Structure model' chem_comp_bond 21 6 'Structure model' database_2 22 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_atom_site.B_iso_or_equiv' 3 5 'Structure model' '_atom_site.Cartn_x' 4 5 'Structure model' '_atom_site.Cartn_y' 5 5 'Structure model' '_atom_site.Cartn_z' 6 5 'Structure model' '_atom_site.auth_asym_id' 7 5 'Structure model' '_atom_site.auth_atom_id' 8 5 'Structure model' '_atom_site.auth_comp_id' 9 5 'Structure model' '_atom_site.auth_seq_id' 10 5 'Structure model' '_atom_site.label_asym_id' 11 5 'Structure model' '_atom_site.label_atom_id' 12 5 'Structure model' '_atom_site.label_comp_id' 13 5 'Structure model' '_atom_site.label_entity_id' 14 5 'Structure model' '_atom_site.type_symbol' 15 5 'Structure model' '_chem_comp.name' 16 5 'Structure model' '_chem_comp.type' 17 5 'Structure model' '_entity.formula_weight' 18 5 'Structure model' '_entity.pdbx_description' 19 5 'Structure model' '_entity.pdbx_number_of_molecules' 20 5 'Structure model' '_entity.src_method' 21 5 'Structure model' '_entity.type' 22 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 23 5 'Structure model' '_struct_conn.pdbx_dist_value' 24 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 6 'Structure model' '_chem_comp.pdbx_synonyms' 32 6 'Structure model' '_database_2.pdbx_DOI' 33 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SERGUI 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3WBD _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THE NUCLEOTIDE SEQUENCE OF THIS ENTRY WAS DEPOSITED ON DDBJ WITH THE ACCESSION AB821355.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 45 ? ? -39.58 -37.24 2 1 VAL A 56 ? ? 76.18 -54.06 3 1 ASP A 65 ? ? -68.25 1.70 4 1 ASP A 232 ? ? -110.13 -76.16 5 1 VAL B 56 ? ? 80.18 -56.00 6 1 GLU B 170 ? ? -82.24 -159.62 7 1 ASP B 232 ? ? -110.25 -75.58 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A ILE 111 ? A ILE 113 3 1 Y 1 A LYS 112 ? A LYS 114 4 1 Y 1 A GLY 113 ? A GLY 115 5 1 Y 1 A GLY 114 ? A GLY 116 6 1 Y 1 A GLY 115 ? A GLY 117 7 1 Y 1 A GLY 116 ? A GLY 118 8 1 Y 1 A SER 117 ? A SER 119 9 1 Y 1 A GLY 118 ? A GLY 120 10 1 Y 1 A GLY 119 ? A GLY 121 11 1 Y 1 A GLY 120 ? A GLY 122 12 1 Y 1 A GLY 121 ? A GLY 123 13 1 Y 1 A SER 122 ? A SER 124 14 1 Y 1 A GLY 123 ? A GLY 125 15 1 Y 1 A GLY 124 ? A GLY 126 16 1 Y 1 B GLY -1 ? B GLY 1 17 1 Y 1 B GLY 113 ? B GLY 115 18 1 Y 1 B GLY 114 ? B GLY 116 19 1 Y 1 B GLY 115 ? B GLY 117 20 1 Y 1 B GLY 116 ? B GLY 118 21 1 Y 1 B SER 117 ? B SER 119 22 1 Y 1 B GLY 118 ? B GLY 120 23 1 Y 1 B GLY 119 ? B GLY 121 24 1 Y 1 B GLY 120 ? B GLY 122 25 1 Y 1 B GLY 121 ? B GLY 123 26 1 Y 1 B SER 122 ? B SER 124 27 1 Y 1 B GLY 123 ? B GLY 125 28 1 Y 1 B GLY 124 ? B GLY 126 29 1 Y 1 B GLY 125 ? B GLY 127 30 1 Y 1 B GLY 126 ? B GLY 128 31 1 Y 1 B SER 127 ? B SER 129 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FLC CAC C N N 88 FLC CA C N N 89 FLC CB C N N 90 FLC CBC C N N 91 FLC CG C N N 92 FLC CGC C N N 93 FLC OA1 O N N 94 FLC OA2 O N N 95 FLC OB1 O N N 96 FLC OB2 O N N 97 FLC OG1 O N N 98 FLC OG2 O N N 99 FLC OHB O N N 100 FLC HA1 H N N 101 FLC HA2 H N N 102 FLC HG1 H N N 103 FLC HG2 H N N 104 FLC HOB H N N 105 GLN N N N N 106 GLN CA C N S 107 GLN C C N N 108 GLN O O N N 109 GLN CB C N N 110 GLN CG C N N 111 GLN CD C N N 112 GLN OE1 O N N 113 GLN NE2 N N N 114 GLN OXT O N N 115 GLN H H N N 116 GLN H2 H N N 117 GLN HA H N N 118 GLN HB2 H N N 119 GLN HB3 H N N 120 GLN HG2 H N N 121 GLN HG3 H N N 122 GLN HE21 H N N 123 GLN HE22 H N N 124 GLN HXT H N N 125 GLU N N N N 126 GLU CA C N S 127 GLU C C N N 128 GLU O O N N 129 GLU CB C N N 130 GLU CG C N N 131 GLU CD C N N 132 GLU OE1 O N N 133 GLU OE2 O N N 134 GLU OXT O N N 135 GLU H H N N 136 GLU H2 H N N 137 GLU HA H N N 138 GLU HB2 H N N 139 GLU HB3 H N N 140 GLU HG2 H N N 141 GLU HG3 H N N 142 GLU HE2 H N N 143 GLU HXT H N N 144 GLY N N N N 145 GLY CA C N N 146 GLY C C N N 147 GLY O O N N 148 GLY OXT O N N 149 GLY H H N N 150 GLY H2 H N N 151 GLY HA2 H N N 152 GLY HA3 H N N 153 GLY HXT H N N 154 HIS N N N N 155 HIS CA C N S 156 HIS C C N N 157 HIS O O N N 158 HIS CB C N N 159 HIS CG C Y N 160 HIS ND1 N Y N 161 HIS CD2 C Y N 162 HIS CE1 C Y N 163 HIS NE2 N Y N 164 HIS OXT O N N 165 HIS H H N N 166 HIS H2 H N N 167 HIS HA H N N 168 HIS HB2 H N N 169 HIS HB3 H N N 170 HIS HD1 H N N 171 HIS HD2 H N N 172 HIS HE1 H N N 173 HIS HE2 H N N 174 HIS HXT H N N 175 HOH O O N N 176 HOH H1 H N N 177 HOH H2 H N N 178 ILE N N N N 179 ILE CA C N S 180 ILE C C N N 181 ILE O O N N 182 ILE CB C N S 183 ILE CG1 C N N 184 ILE CG2 C N N 185 ILE CD1 C N N 186 ILE OXT O N N 187 ILE H H N N 188 ILE H2 H N N 189 ILE HA H N N 190 ILE HB H N N 191 ILE HG12 H N N 192 ILE HG13 H N N 193 ILE HG21 H N N 194 ILE HG22 H N N 195 ILE HG23 H N N 196 ILE HD11 H N N 197 ILE HD12 H N N 198 ILE HD13 H N N 199 ILE HXT H N N 200 LEU N N N N 201 LEU CA C N S 202 LEU C C N N 203 LEU O O N N 204 LEU CB C N N 205 LEU CG C N N 206 LEU CD1 C N N 207 LEU CD2 C N N 208 LEU OXT O N N 209 LEU H H N N 210 LEU H2 H N N 211 LEU HA H N N 212 LEU HB2 H N N 213 LEU HB3 H N N 214 LEU HG H N N 215 LEU HD11 H N N 216 LEU HD12 H N N 217 LEU HD13 H N N 218 LEU HD21 H N N 219 LEU HD22 H N N 220 LEU HD23 H N N 221 LEU HXT H N N 222 LYS N N N N 223 LYS CA C N S 224 LYS C C N N 225 LYS O O N N 226 LYS CB C N N 227 LYS CG C N N 228 LYS CD C N N 229 LYS CE C N N 230 LYS NZ N N N 231 LYS OXT O N N 232 LYS H H N N 233 LYS H2 H N N 234 LYS HA H N N 235 LYS HB2 H N N 236 LYS HB3 H N N 237 LYS HG2 H N N 238 LYS HG3 H N N 239 LYS HD2 H N N 240 LYS HD3 H N N 241 LYS HE2 H N N 242 LYS HE3 H N N 243 LYS HZ1 H N N 244 LYS HZ2 H N N 245 LYS HZ3 H N N 246 LYS HXT H N N 247 MET N N N N 248 MET CA C N S 249 MET C C N N 250 MET O O N N 251 MET CB C N N 252 MET CG C N N 253 MET SD S N N 254 MET CE C N N 255 MET OXT O N N 256 MET H H N N 257 MET H2 H N N 258 MET HA H N N 259 MET HB2 H N N 260 MET HB3 H N N 261 MET HG2 H N N 262 MET HG3 H N N 263 MET HE1 H N N 264 MET HE2 H N N 265 MET HE3 H N N 266 MET HXT H N N 267 PHE N N N N 268 PHE CA C N S 269 PHE C C N N 270 PHE O O N N 271 PHE CB C N N 272 PHE CG C Y N 273 PHE CD1 C Y N 274 PHE CD2 C Y N 275 PHE CE1 C Y N 276 PHE CE2 C Y N 277 PHE CZ C Y N 278 PHE OXT O N N 279 PHE H H N N 280 PHE H2 H N N 281 PHE HA H N N 282 PHE HB2 H N N 283 PHE HB3 H N N 284 PHE HD1 H N N 285 PHE HD2 H N N 286 PHE HE1 H N N 287 PHE HE2 H N N 288 PHE HZ H N N 289 PHE HXT H N N 290 PRO N N N N 291 PRO CA C N S 292 PRO C C N N 293 PRO O O N N 294 PRO CB C N N 295 PRO CG C N N 296 PRO CD C N N 297 PRO OXT O N N 298 PRO H H N N 299 PRO HA H N N 300 PRO HB2 H N N 301 PRO HB3 H N N 302 PRO HG2 H N N 303 PRO HG3 H N N 304 PRO HD2 H N N 305 PRO HD3 H N N 306 PRO HXT H N N 307 SER N N N N 308 SER CA C N S 309 SER C C N N 310 SER O O N N 311 SER CB C N N 312 SER OG O N N 313 SER OXT O N N 314 SER H H N N 315 SER H2 H N N 316 SER HA H N N 317 SER HB2 H N N 318 SER HB3 H N N 319 SER HG H N N 320 SER HXT H N N 321 SIA C1 C N N 322 SIA C2 C N R 323 SIA C3 C N N 324 SIA C4 C N S 325 SIA C5 C N R 326 SIA C6 C N R 327 SIA C7 C N R 328 SIA C8 C N R 329 SIA C9 C N N 330 SIA C10 C N N 331 SIA C11 C N N 332 SIA N5 N N N 333 SIA O1A O N N 334 SIA O1B O N N 335 SIA O2 O N N 336 SIA O4 O N N 337 SIA O6 O N N 338 SIA O7 O N N 339 SIA O8 O N N 340 SIA O9 O N N 341 SIA O10 O N N 342 SIA H32 H N N 343 SIA H31 H N N 344 SIA H4 H N N 345 SIA H5 H N N 346 SIA H6 H N N 347 SIA H7 H N N 348 SIA H8 H N N 349 SIA H92 H N N 350 SIA H91 H N N 351 SIA H111 H N N 352 SIA H113 H N N 353 SIA H112 H N N 354 SIA HN5 H N N 355 SIA HO1B H N N 356 SIA HO2 H N N 357 SIA HO4 H N N 358 SIA HO7 H N N 359 SIA HO8 H N N 360 SIA HO9 H N N 361 THR N N N N 362 THR CA C N S 363 THR C C N N 364 THR O O N N 365 THR CB C N R 366 THR OG1 O N N 367 THR CG2 C N N 368 THR OXT O N N 369 THR H H N N 370 THR H2 H N N 371 THR HA H N N 372 THR HB H N N 373 THR HG1 H N N 374 THR HG21 H N N 375 THR HG22 H N N 376 THR HG23 H N N 377 THR HXT H N N 378 TRP N N N N 379 TRP CA C N S 380 TRP C C N N 381 TRP O O N N 382 TRP CB C N N 383 TRP CG C Y N 384 TRP CD1 C Y N 385 TRP CD2 C Y N 386 TRP NE1 N Y N 387 TRP CE2 C Y N 388 TRP CE3 C Y N 389 TRP CZ2 C Y N 390 TRP CZ3 C Y N 391 TRP CH2 C Y N 392 TRP OXT O N N 393 TRP H H N N 394 TRP H2 H N N 395 TRP HA H N N 396 TRP HB2 H N N 397 TRP HB3 H N N 398 TRP HD1 H N N 399 TRP HE1 H N N 400 TRP HE3 H N N 401 TRP HZ2 H N N 402 TRP HZ3 H N N 403 TRP HH2 H N N 404 TRP HXT H N N 405 TYR N N N N 406 TYR CA C N S 407 TYR C C N N 408 TYR O O N N 409 TYR CB C N N 410 TYR CG C Y N 411 TYR CD1 C Y N 412 TYR CD2 C Y N 413 TYR CE1 C Y N 414 TYR CE2 C Y N 415 TYR CZ C Y N 416 TYR OH O N N 417 TYR OXT O N N 418 TYR H H N N 419 TYR H2 H N N 420 TYR HA H N N 421 TYR HB2 H N N 422 TYR HB3 H N N 423 TYR HD1 H N N 424 TYR HD2 H N N 425 TYR HE1 H N N 426 TYR HE2 H N N 427 TYR HH H N N 428 TYR HXT H N N 429 VAL N N N N 430 VAL CA C N S 431 VAL C C N N 432 VAL O O N N 433 VAL CB C N N 434 VAL CG1 C N N 435 VAL CG2 C N N 436 VAL OXT O N N 437 VAL H H N N 438 VAL H2 H N N 439 VAL HA H N N 440 VAL HB H N N 441 VAL HG11 H N N 442 VAL HG12 H N N 443 VAL HG13 H N N 444 VAL HG21 H N N 445 VAL HG22 H N N 446 VAL HG23 H N N 447 VAL HXT H N N 448 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FLC CAC CA sing N N 83 FLC CAC OA1 doub N N 84 FLC CAC OA2 sing N N 85 FLC CA CB sing N N 86 FLC CA HA1 sing N N 87 FLC CA HA2 sing N N 88 FLC CB CBC sing N N 89 FLC CB CG sing N N 90 FLC CB OHB sing N N 91 FLC CBC OB1 doub N N 92 FLC CBC OB2 sing N N 93 FLC CG CGC sing N N 94 FLC CG HG1 sing N N 95 FLC CG HG2 sing N N 96 FLC CGC OG1 doub N N 97 FLC CGC OG2 sing N N 98 FLC OHB HOB sing N N 99 GLN N CA sing N N 100 GLN N H sing N N 101 GLN N H2 sing N N 102 GLN CA C sing N N 103 GLN CA CB sing N N 104 GLN CA HA sing N N 105 GLN C O doub N N 106 GLN C OXT sing N N 107 GLN CB CG sing N N 108 GLN CB HB2 sing N N 109 GLN CB HB3 sing N N 110 GLN CG CD sing N N 111 GLN CG HG2 sing N N 112 GLN CG HG3 sing N N 113 GLN CD OE1 doub N N 114 GLN CD NE2 sing N N 115 GLN NE2 HE21 sing N N 116 GLN NE2 HE22 sing N N 117 GLN OXT HXT sing N N 118 GLU N CA sing N N 119 GLU N H sing N N 120 GLU N H2 sing N N 121 GLU CA C sing N N 122 GLU CA CB sing N N 123 GLU CA HA sing N N 124 GLU C O doub N N 125 GLU C OXT sing N N 126 GLU CB CG sing N N 127 GLU CB HB2 sing N N 128 GLU CB HB3 sing N N 129 GLU CG CD sing N N 130 GLU CG HG2 sing N N 131 GLU CG HG3 sing N N 132 GLU CD OE1 doub N N 133 GLU CD OE2 sing N N 134 GLU OE2 HE2 sing N N 135 GLU OXT HXT sing N N 136 GLY N CA sing N N 137 GLY N H sing N N 138 GLY N H2 sing N N 139 GLY CA C sing N N 140 GLY CA HA2 sing N N 141 GLY CA HA3 sing N N 142 GLY C O doub N N 143 GLY C OXT sing N N 144 GLY OXT HXT sing N N 145 HIS N CA sing N N 146 HIS N H sing N N 147 HIS N H2 sing N N 148 HIS CA C sing N N 149 HIS CA CB sing N N 150 HIS CA HA sing N N 151 HIS C O doub N N 152 HIS C OXT sing N N 153 HIS CB CG sing N N 154 HIS CB HB2 sing N N 155 HIS CB HB3 sing N N 156 HIS CG ND1 sing Y N 157 HIS CG CD2 doub Y N 158 HIS ND1 CE1 doub Y N 159 HIS ND1 HD1 sing N N 160 HIS CD2 NE2 sing Y N 161 HIS CD2 HD2 sing N N 162 HIS CE1 NE2 sing Y N 163 HIS CE1 HE1 sing N N 164 HIS NE2 HE2 sing N N 165 HIS OXT HXT sing N N 166 HOH O H1 sing N N 167 HOH O H2 sing N N 168 ILE N CA sing N N 169 ILE N H sing N N 170 ILE N H2 sing N N 171 ILE CA C sing N N 172 ILE CA CB sing N N 173 ILE CA HA sing N N 174 ILE C O doub N N 175 ILE C OXT sing N N 176 ILE CB CG1 sing N N 177 ILE CB CG2 sing N N 178 ILE CB HB sing N N 179 ILE CG1 CD1 sing N N 180 ILE CG1 HG12 sing N N 181 ILE CG1 HG13 sing N N 182 ILE CG2 HG21 sing N N 183 ILE CG2 HG22 sing N N 184 ILE CG2 HG23 sing N N 185 ILE CD1 HD11 sing N N 186 ILE CD1 HD12 sing N N 187 ILE CD1 HD13 sing N N 188 ILE OXT HXT sing N N 189 LEU N CA sing N N 190 LEU N H sing N N 191 LEU N H2 sing N N 192 LEU CA C sing N N 193 LEU CA CB sing N N 194 LEU CA HA sing N N 195 LEU C O doub N N 196 LEU C OXT sing N N 197 LEU CB CG sing N N 198 LEU CB HB2 sing N N 199 LEU CB HB3 sing N N 200 LEU CG CD1 sing N N 201 LEU CG CD2 sing N N 202 LEU CG HG sing N N 203 LEU CD1 HD11 sing N N 204 LEU CD1 HD12 sing N N 205 LEU CD1 HD13 sing N N 206 LEU CD2 HD21 sing N N 207 LEU CD2 HD22 sing N N 208 LEU CD2 HD23 sing N N 209 LEU OXT HXT sing N N 210 LYS N CA sing N N 211 LYS N H sing N N 212 LYS N H2 sing N N 213 LYS CA C sing N N 214 LYS CA CB sing N N 215 LYS CA HA sing N N 216 LYS C O doub N N 217 LYS C OXT sing N N 218 LYS CB CG sing N N 219 LYS CB HB2 sing N N 220 LYS CB HB3 sing N N 221 LYS CG CD sing N N 222 LYS CG HG2 sing N N 223 LYS CG HG3 sing N N 224 LYS CD CE sing N N 225 LYS CD HD2 sing N N 226 LYS CD HD3 sing N N 227 LYS CE NZ sing N N 228 LYS CE HE2 sing N N 229 LYS CE HE3 sing N N 230 LYS NZ HZ1 sing N N 231 LYS NZ HZ2 sing N N 232 LYS NZ HZ3 sing N N 233 LYS OXT HXT sing N N 234 MET N CA sing N N 235 MET N H sing N N 236 MET N H2 sing N N 237 MET CA C sing N N 238 MET CA CB sing N N 239 MET CA HA sing N N 240 MET C O doub N N 241 MET C OXT sing N N 242 MET CB CG sing N N 243 MET CB HB2 sing N N 244 MET CB HB3 sing N N 245 MET CG SD sing N N 246 MET CG HG2 sing N N 247 MET CG HG3 sing N N 248 MET SD CE sing N N 249 MET CE HE1 sing N N 250 MET CE HE2 sing N N 251 MET CE HE3 sing N N 252 MET OXT HXT sing N N 253 PHE N CA sing N N 254 PHE N H sing N N 255 PHE N H2 sing N N 256 PHE CA C sing N N 257 PHE CA CB sing N N 258 PHE CA HA sing N N 259 PHE C O doub N N 260 PHE C OXT sing N N 261 PHE CB CG sing N N 262 PHE CB HB2 sing N N 263 PHE CB HB3 sing N N 264 PHE CG CD1 doub Y N 265 PHE CG CD2 sing Y N 266 PHE CD1 CE1 sing Y N 267 PHE CD1 HD1 sing N N 268 PHE CD2 CE2 doub Y N 269 PHE CD2 HD2 sing N N 270 PHE CE1 CZ doub Y N 271 PHE CE1 HE1 sing N N 272 PHE CE2 CZ sing Y N 273 PHE CE2 HE2 sing N N 274 PHE CZ HZ sing N N 275 PHE OXT HXT sing N N 276 PRO N CA sing N N 277 PRO N CD sing N N 278 PRO N H sing N N 279 PRO CA C sing N N 280 PRO CA CB sing N N 281 PRO CA HA sing N N 282 PRO C O doub N N 283 PRO C OXT sing N N 284 PRO CB CG sing N N 285 PRO CB HB2 sing N N 286 PRO CB HB3 sing N N 287 PRO CG CD sing N N 288 PRO CG HG2 sing N N 289 PRO CG HG3 sing N N 290 PRO CD HD2 sing N N 291 PRO CD HD3 sing N N 292 PRO OXT HXT sing N N 293 SER N CA sing N N 294 SER N H sing N N 295 SER N H2 sing N N 296 SER CA C sing N N 297 SER CA CB sing N N 298 SER CA HA sing N N 299 SER C O doub N N 300 SER C OXT sing N N 301 SER CB OG sing N N 302 SER CB HB2 sing N N 303 SER CB HB3 sing N N 304 SER OG HG sing N N 305 SER OXT HXT sing N N 306 SIA C1 C2 sing N N 307 SIA C1 O1A doub N N 308 SIA C1 O1B sing N N 309 SIA C2 C3 sing N N 310 SIA C2 O2 sing N N 311 SIA C2 O6 sing N N 312 SIA C3 C4 sing N N 313 SIA C3 H32 sing N N 314 SIA C3 H31 sing N N 315 SIA C4 C5 sing N N 316 SIA C4 O4 sing N N 317 SIA C4 H4 sing N N 318 SIA C5 C6 sing N N 319 SIA C5 N5 sing N N 320 SIA C5 H5 sing N N 321 SIA C6 C7 sing N N 322 SIA C6 O6 sing N N 323 SIA C6 H6 sing N N 324 SIA C7 C8 sing N N 325 SIA C7 O7 sing N N 326 SIA C7 H7 sing N N 327 SIA C8 C9 sing N N 328 SIA C8 O8 sing N N 329 SIA C8 H8 sing N N 330 SIA C9 O9 sing N N 331 SIA C9 H92 sing N N 332 SIA C9 H91 sing N N 333 SIA C10 C11 sing N N 334 SIA C10 N5 sing N N 335 SIA C10 O10 doub N N 336 SIA C11 H111 sing N N 337 SIA C11 H113 sing N N 338 SIA C11 H112 sing N N 339 SIA N5 HN5 sing N N 340 SIA O1B HO1B sing N N 341 SIA O2 HO2 sing N N 342 SIA O4 HO4 sing N N 343 SIA O7 HO7 sing N N 344 SIA O8 HO8 sing N N 345 SIA O9 HO9 sing N N 346 THR N CA sing N N 347 THR N H sing N N 348 THR N H2 sing N N 349 THR CA C sing N N 350 THR CA CB sing N N 351 THR CA HA sing N N 352 THR C O doub N N 353 THR C OXT sing N N 354 THR CB OG1 sing N N 355 THR CB CG2 sing N N 356 THR CB HB sing N N 357 THR OG1 HG1 sing N N 358 THR CG2 HG21 sing N N 359 THR CG2 HG22 sing N N 360 THR CG2 HG23 sing N N 361 THR OXT HXT sing N N 362 TRP N CA sing N N 363 TRP N H sing N N 364 TRP N H2 sing N N 365 TRP CA C sing N N 366 TRP CA CB sing N N 367 TRP CA HA sing N N 368 TRP C O doub N N 369 TRP C OXT sing N N 370 TRP CB CG sing N N 371 TRP CB HB2 sing N N 372 TRP CB HB3 sing N N 373 TRP CG CD1 doub Y N 374 TRP CG CD2 sing Y N 375 TRP CD1 NE1 sing Y N 376 TRP CD1 HD1 sing N N 377 TRP CD2 CE2 doub Y N 378 TRP CD2 CE3 sing Y N 379 TRP NE1 CE2 sing Y N 380 TRP NE1 HE1 sing N N 381 TRP CE2 CZ2 sing Y N 382 TRP CE3 CZ3 doub Y N 383 TRP CE3 HE3 sing N N 384 TRP CZ2 CH2 doub Y N 385 TRP CZ2 HZ2 sing N N 386 TRP CZ3 CH2 sing Y N 387 TRP CZ3 HZ3 sing N N 388 TRP CH2 HH2 sing N N 389 TRP OXT HXT sing N N 390 TYR N CA sing N N 391 TYR N H sing N N 392 TYR N H2 sing N N 393 TYR CA C sing N N 394 TYR CA CB sing N N 395 TYR CA HA sing N N 396 TYR C O doub N N 397 TYR C OXT sing N N 398 TYR CB CG sing N N 399 TYR CB HB2 sing N N 400 TYR CB HB3 sing N N 401 TYR CG CD1 doub Y N 402 TYR CG CD2 sing Y N 403 TYR CD1 CE1 sing Y N 404 TYR CD1 HD1 sing N N 405 TYR CD2 CE2 doub Y N 406 TYR CD2 HD2 sing N N 407 TYR CE1 CZ doub Y N 408 TYR CE1 HE1 sing N N 409 TYR CE2 CZ sing Y N 410 TYR CE2 HE2 sing N N 411 TYR CZ OH sing N N 412 TYR OH HH sing N N 413 TYR OXT HXT sing N N 414 VAL N CA sing N N 415 VAL N H sing N N 416 VAL N H2 sing N N 417 VAL CA C sing N N 418 VAL CA CB sing N N 419 VAL CA HA sing N N 420 VAL C O doub N N 421 VAL C OXT sing N N 422 VAL CB CG1 sing N N 423 VAL CB CG2 sing N N 424 VAL CB HB sing N N 425 VAL CG1 HG11 sing N N 426 VAL CG1 HG12 sing N N 427 VAL CG1 HG13 sing N N 428 VAL CG2 HG21 sing N N 429 VAL CG2 HG22 sing N N 430 VAL CG2 HG23 sing N N 431 VAL OXT HXT sing N N 432 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 SIA 1 C SIA 1 E SIA 1002 n C 2 SIA 2 C SIA 2 E SIA 1003 n C 2 SIA 3 C SIA 3 E SIA 1004 n C 2 SIA 4 C SIA 4 E SIA 1005 n C 2 SIA 5 C SIA 5 E SIA 1006 n C 2 SIA 6 C SIA 6 E SIA 1007 n C 2 SIA 7 C SIA 7 E SIA 1008 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DNeup5Aca2-8DNeup5Aca2-8DNeup5Aca2-8DNeup5Aca2-8DNeup5Aca2-8DNeup5Aca2-8DNeup5Aca2- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,7,6/[Aad21122h-2a_2-6_5*NCC/3=O]/1-1-1-1-1-1-1/a8-b2_b8-c2_c8-d2_d8-e2_e8-f2_f8-g2' WURCS PDB2Glycan 1.1.0 3 2 ;[][a-D-Neup5Ac]{[(8+2)][a-D-Neup5Ac]{[(8+2)][a-D-Neup5Ac]{[(8+2)][a-D-Neup5Ac]{[(8+2)][a-D-Neup5Ac]{[(8+2)][a-D-Neup5Ac]{[(8+2)][a-D-Neup5Ac]{}}}}}}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 SIA C2 O2 1 SIA O8 HO8 sing ? 2 2 3 SIA C2 O2 2 SIA O8 HO8 sing ? 3 2 4 SIA C2 O2 3 SIA O8 HO8 sing ? 4 2 5 SIA C2 O2 4 SIA O8 HO8 sing ? 5 2 6 SIA C2 O2 5 SIA O8 HO8 sing ? 6 2 7 SIA C2 O2 6 SIA O8 HO8 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 SIA 1 n 2 SIA 2 n 2 SIA 3 n 2 SIA 4 n 2 SIA 5 n 2 SIA 6 n 2 SIA 7 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CITRATE ANION' FLC 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PLG _pdbx_initial_refinement_model.details ? #