data_3X2O # _entry.id 3X2O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code RCSB RCSB097102 PDB 3X2O WWPDB D_1000097102 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3x2g . unspecified PDB 3x2h . unspecified PDB 3x2i . unspecified PDB 3x2j . unspecified PDB 3x2k . unspecified PDB 3X2l . unspecified PDB 3x2m . unspecified PDB 3x2n . unspecified PDB 3x2p . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3X2O _pdbx_database_status.recvd_initial_deposition_date 2014-12-22 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nakamura, A.' 1 'Ishida, T.' 2 'Kusaka, K.' 3 'Yamada, T.' 4 'Tanaka, I.' 5 'Niimura, N.' 6 'Samejima, M.' 7 'Igarashi, K.' 8 # _citation.id primary _citation.title ;"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography. ; _citation.journal_abbrev 'Sci Adv' _citation.journal_volume 1 _citation.page_first e1500263 _citation.page_last e1500263 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2375-2548 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26601228 _citation.pdbx_database_id_DOI 10.1126/sciadv.1500263 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nakamura, A.' 1 ? primary 'Ishida, T.' 2 ? primary 'Kusaka, K.' 3 ? primary 'Yamada, T.' 4 ? primary 'Fushinobu, S.' 5 ? primary 'Tanaka, I.' 6 ? primary 'Kaneko, S.' 7 ? primary 'Ohta, K.' 8 ? primary 'Tanaka, H.' 9 ? primary 'Inaka, K.' 10 ? primary 'Higuchi, Y.' 11 ? primary 'Niimura, N.' 12 ? primary 'Samejima, M.' 13 ? primary 'Igarashi, K.' 14 ? # _cell.entry_id 3X2O _cell.length_a 46.152 _cell.length_b 59.067 _cell.length_c 64.285 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3X2O _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Endoglucanase V-like protein' 18178.793 1 ? ? 'UNP residues 27-206' ? 2 water nat water 18.015 152 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIV VKVTDLCPVQG(41Q)QEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNG ACLSGETAPNWPSTACGNKGTAPS ; _entity_poly.pdbx_seq_one_letter_code_can ;ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIV VKVTDLCPVQGXQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLS GETAPNWPSTACGNKGTAPS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 GLY n 1 4 GLY n 1 5 TYR n 1 6 VAL n 1 7 GLN n 1 8 GLN n 1 9 ALA n 1 10 THR n 1 11 GLY n 1 12 GLN n 1 13 ALA n 1 14 SER n 1 15 PHE n 1 16 THR n 1 17 MET n 1 18 TYR n 1 19 SER n 1 20 GLY n 1 21 CYS n 1 22 GLY n 1 23 SER n 1 24 PRO n 1 25 ALA n 1 26 CYS n 1 27 GLY n 1 28 LYS n 1 29 ALA n 1 30 ALA n 1 31 SER n 1 32 GLY n 1 33 PHE n 1 34 THR n 1 35 ALA n 1 36 ALA n 1 37 ILE n 1 38 ASN n 1 39 GLN n 1 40 LEU n 1 41 ALA n 1 42 PHE n 1 43 GLY n 1 44 SER n 1 45 ALA n 1 46 PRO n 1 47 GLY n 1 48 LEU n 1 49 GLY n 1 50 ALA n 1 51 GLY n 1 52 ASP n 1 53 ALA n 1 54 CYS n 1 55 GLY n 1 56 ARG n 1 57 CYS n 1 58 PHE n 1 59 ALA n 1 60 LEU n 1 61 THR n 1 62 GLY n 1 63 ASN n 1 64 HIS n 1 65 ASP n 1 66 PRO n 1 67 TYR n 1 68 SER n 1 69 PRO n 1 70 ASN n 1 71 TYR n 1 72 THR n 1 73 GLY n 1 74 PRO n 1 75 PHE n 1 76 GLY n 1 77 GLN n 1 78 THR n 1 79 ILE n 1 80 VAL n 1 81 VAL n 1 82 LYS n 1 83 VAL n 1 84 THR n 1 85 ASP n 1 86 LEU n 1 87 CYS n 1 88 PRO n 1 89 VAL n 1 90 GLN n 1 91 GLY n 1 92 41Q n 1 93 GLN n 1 94 GLU n 1 95 PHE n 1 96 CYS n 1 97 GLY n 1 98 GLN n 1 99 THR n 1 100 THR n 1 101 SER n 1 102 ASN n 1 103 PRO n 1 104 THR n 1 105 ASN n 1 106 GLN n 1 107 HIS n 1 108 GLY n 1 109 MET n 1 110 PRO n 1 111 PHE n 1 112 HIS n 1 113 PHE n 1 114 ASP n 1 115 ILE n 1 116 CYS n 1 117 GLU n 1 118 ASP n 1 119 THR n 1 120 GLY n 1 121 GLY n 1 122 SER n 1 123 ALA n 1 124 LYS n 1 125 PHE n 1 126 PHE n 1 127 PRO n 1 128 SER n 1 129 GLY n 1 130 HIS n 1 131 GLY n 1 132 ALA n 1 133 LEU n 1 134 THR n 1 135 GLY n 1 136 THR n 1 137 PHE n 1 138 THR n 1 139 GLU n 1 140 VAL n 1 141 SER n 1 142 CYS n 1 143 SER n 1 144 GLN n 1 145 TRP n 1 146 SER n 1 147 GLY n 1 148 SER n 1 149 ASP n 1 150 GLY n 1 151 GLY n 1 152 GLN n 1 153 LEU n 1 154 TRP n 1 155 ASN n 1 156 GLY n 1 157 ALA n 1 158 CYS n 1 159 LEU n 1 160 SER n 1 161 GLY n 1 162 GLU n 1 163 THR n 1 164 ALA n 1 165 PRO n 1 166 ASN n 1 167 TRP n 1 168 PRO n 1 169 SER n 1 170 THR n 1 171 ALA n 1 172 CYS n 1 173 GLY n 1 174 ASN n 1 175 LYS n 1 176 GLY n 1 177 THR n 1 178 ALA n 1 179 PRO n 1 180 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'White-rot fungus' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'egv, PcCel45A' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-3 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Phanerochaete chrysosporium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5306 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain KM71H _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pPICZa _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B3Y002_PHACH _struct_ref.pdbx_db_accession B3Y002 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIV VKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLS GETAPNWPSTACGNKGTAPS ; _struct_ref.pdbx_align_begin 27 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3X2O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 180 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B3Y002 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 206 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 180 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 41Q 'L-peptide linking' n 4-imino-L-homoserine ? 'C4 H8 N2 O3' 132.118 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DOD non-polymer . 'DEUTERATED WATER' ? 'D2 O' 20.028 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _exptl.entry_id _exptl.method _exptl.crystals_number 3X2O 'NEUTRON DIFFRACTION' 1 3X2O 'X-RAY DIFFRACTION' 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_percent_sol 48.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '60% 3-methyl-1,5-pentanediol, 50 mM Tris-HCl, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id _diffrn.pdbx_serial_crystal_experiment 1 298 ? 1 ? 2 298 ? 1 ? # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'STORAGE PHOSPHORS' 'IBIX (BL03), J-PARC' 2014-04-25 ? 2 CCD 'ADSC QUANTUM 315r' 2014-06-09 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 L 'NEUTRON TIME-OF-FLIGHT' LAUE neutron 2 3 M ? 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.5 1.0 2 20.4 1.0 3 1.0 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 'SPALLATION SOURCE' 'ORNL Spallation Neutron Source BEAMLINE MANDI' 'ORNL Spallation Neutron Source' MANDI ? 1.5-20.4 2 SYNCHROTRON 'PHOTON FACTORY BEAMLINE BL-5A' 'Photon Factory' BL-5A ? 1.0 # loop_ _reflns.pdbx_diffrn_id _reflns.pdbx_ordinal _reflns.entry_id _reflns.observed_criterion_sigma_I _reflns.observed_criterion_sigma_F _reflns.d_resolution_low _reflns.d_resolution_high _reflns.number_obs _reflns.number_all _reflns.percent_possible_obs _reflns.pdbx_Rmerge_I_obs _reflns.pdbx_Rsym_value _reflns.pdbx_netI_over_sigmaI _reflns.B_iso_Wilson_estimate _reflns.pdbx_redundancy _reflns.R_free_details _reflns.limit_h_max _reflns.limit_h_min _reflns.limit_k_max _reflns.limit_k_min _reflns.limit_l_max _reflns.limit_l_min _reflns.observed_criterion_F_max _reflns.observed_criterion_F_min _reflns.pdbx_chi_squared _reflns.pdbx_scaling_rejects _reflns.pdbx_CC_half _reflns.pdbx_Rpim_I_all _reflns.pdbx_Rrim_I_all 1 1 3X2O ? ? 20.4 1.5 25581 ? 93.3 0.245 ? 3.9 ? 3.9 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 2 3X2O 0.0 ? 50 1.0 99189 ? 99.5 0.080 ? 106 ? 13.1 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_Rrim_I_all 1 1 1.50 1.55 81.1 0.501 ? 1.4 2.1 ? ? ? ? ? ? ? ? ? 2 2 1.00 1.02 99.4 0.299 ? 6.5 6.3 ? ? ? ? ? ? ? ? ? # loop_ _refine.pdbx_refine_id _refine.entry_id _refine.pdbx_diffrn_id _refine.pdbx_TLS_residual_ADP_flag _refine.ls_number_reflns_obs _refine.ls_number_reflns_all _refine.pdbx_ls_sigma_I _refine.pdbx_ls_sigma_F _refine.pdbx_data_cutoff_high_absF _refine.pdbx_data_cutoff_low_absF _refine.pdbx_data_cutoff_high_rms_absF _refine.ls_d_res_low _refine.ls_d_res_high _refine.ls_percent_reflns_obs _refine.ls_R_factor_obs _refine.ls_R_factor_all _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free _refine.ls_R_factor_R_free_error _refine.ls_R_factor_R_free_error_details _refine.ls_percent_reflns_R_free _refine.ls_number_reflns_R_free _refine.ls_number_parameters _refine.ls_number_restraints _refine.occupancy_min _refine.occupancy_max _refine.correlation_coeff_Fo_to_Fc _refine.correlation_coeff_Fo_to_Fc_free _refine.B_iso_mean _refine.aniso_B[1][1] _refine.aniso_B[2][2] _refine.aniso_B[3][3] _refine.aniso_B[1][2] _refine.aniso_B[1][3] _refine.aniso_B[2][3] _refine.solvent_model_details _refine.solvent_model_param_ksol _refine.solvent_model_param_bsol _refine.pdbx_solvent_vdw_probe_radii _refine.pdbx_solvent_ion_probe_radii _refine.pdbx_solvent_shrinkage_radii _refine.pdbx_ls_cross_valid_method _refine.details _refine.pdbx_starting_model _refine.pdbx_method_to_determine_struct _refine.pdbx_isotropic_thermal_model _refine.pdbx_stereochemistry_target_values _refine.pdbx_stereochem_target_val_spec_case _refine.pdbx_R_Free_selection_details _refine.pdbx_overall_ESU_R _refine.pdbx_overall_ESU_R_Free _refine.overall_SU_ML _refine.pdbx_overall_phase_error _refine.overall_SU_B _refine.overall_SU_R_Cruickshank_DPI _refine.pdbx_overall_SU_R_free_Cruickshank_DPI _refine.pdbx_overall_SU_R_Blow_DPI _refine.pdbx_overall_SU_R_free_Blow_DPI _refine.ls_redundancy_reflns_obs _refine.B_iso_min _refine.B_iso_max _refine.overall_SU_R_free _refine.ls_wR_factor_R_free _refine.ls_wR_factor_R_work _refine.overall_FOM_free_R_set _refine.overall_FOM_work_R_set 'NEUTRON DIFFRACTION' 3X2O 1 ? 25433 ? ? . ? ? ? 18.826 1.5 94.22 0.2298 ? 0.2275 0.2506 ? ? 9.96 2548 ? ? ? ? ? ? ? ? ? ? ? ? ? 'FLAT BULK SOLVENT MODEL' ? ? 1.11 ? 0.90 ? ? ? ? ? ML ? ? ? ? 0.23 23.39 ? ? ? ? ? ? ? ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3X2O 2 ? 94159 ? ? 1.49 ? ? ? 28.233 1.00 99.26 0.1367 ? 0.1349 0.1531 ? ? 9.97 9389 ? ? ? ? ? ? 27.4849 ? ? ? ? ? ? 'FLAT BULK SOLVENT MODEL' ? ? 1.11 ? 0.90 ? ? ? ? ? ML ? ? ? ? 0.05 11.35 ? ? ? ? ? ? ? ? ? ? ? ? ? # _refine_hist.pdbx_refine_id 'NEUTRON DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1261 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 152 _refine_hist.number_atoms_total 1413 _refine_hist.d_res_high 1.5 _refine_hist.d_res_low 18.826 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 2766 'NEUTRON DIFFRACTION' ? f_angle_d 1.208 ? ? 4694 'NEUTRON DIFFRACTION' ? f_dihedral_angle_d 16.335 ? ? 706 'NEUTRON DIFFRACTION' ? f_chiral_restr 0.088 ? ? 188 'NEUTRON DIFFRACTION' ? f_plane_restr 0.006 ? ? 612 'NEUTRON DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_obs 'NEUTRON DIFFRACTION' . 1.5300 1.5594 1044 0.3906 79.00 0.3634 . . 117 . . . . . 'NEUTRON DIFFRACTION' . 1.5594 1.5912 1150 0.3579 84.00 0.3761 . . 109 . . . . . 'NEUTRON DIFFRACTION' . 1.5912 1.6258 1129 0.3468 87.00 0.3786 . . 150 . . . . . 'NEUTRON DIFFRACTION' . 1.6258 1.6636 1181 0.3273 89.00 0.3419 . . 143 . . . . . 'NEUTRON DIFFRACTION' . 1.6636 1.7052 1228 0.3153 91.00 0.3254 . . 138 . . . . . 'NEUTRON DIFFRACTION' . 1.7052 1.7513 1257 0.3076 94.00 0.3132 . . 125 . . . . . 'NEUTRON DIFFRACTION' . 1.7513 1.8028 1262 0.2905 95.00 0.3352 . . 156 . . . . . 'NEUTRON DIFFRACTION' . 1.8028 1.8609 1313 0.2589 97.00 0.2831 . . 145 . . . . . 'NEUTRON DIFFRACTION' . 1.8609 1.9273 1302 0.2471 96.00 0.2775 . . 138 . . . . . 'NEUTRON DIFFRACTION' . 1.9273 2.0044 1305 0.2272 97.00 0.2247 . . 143 . . . . . 'NEUTRON DIFFRACTION' . 2.0044 2.0955 1319 0.2176 98.00 0.2247 . . 144 . . . . . 'NEUTRON DIFFRACTION' . 2.0955 2.2059 1354 0.1957 99.00 0.2253 . . 142 . . . . . 'NEUTRON DIFFRACTION' . 2.2059 2.3438 1321 0.1811 99.00 0.1928 . . 153 . . . . . 'NEUTRON DIFFRACTION' . 2.3438 2.5244 1354 0.1734 99.00 0.1836 . . 149 . . . . . 'NEUTRON DIFFRACTION' . 2.5244 2.7777 1380 0.1612 100.00 0.2009 . . 142 . . . . . 'NEUTRON DIFFRACTION' . 2.7777 3.1780 1375 0.1554 100.00 0.1849 . . 156 . . . . . 'NEUTRON DIFFRACTION' . 3.1780 3.9976 1390 0.1508 99.00 0.1830 . . 150 . . . . . 'NEUTRON DIFFRACTION' . 3.9976 18.8272 1369 0.1543 92.00 0.1940 . . 148 . . . . . 'X-RAY DIFFRACTION' . 1.0021 1.0134 2596 0.1750 93.00 0.1839 . . 299 . . . . . 'X-RAY DIFFRACTION' . 1.0134 1.0254 2842 0.1662 99.00 0.1647 . . 282 . . . . . 'X-RAY DIFFRACTION' . 1.0254 1.0379 2805 0.1532 99.00 0.1642 . . 289 . . . . . 'X-RAY DIFFRACTION' . 1.0379 1.0510 2794 0.1410 99.00 0.1515 . . 324 . . . . . 'X-RAY DIFFRACTION' . 1.0510 1.0648 2751 0.1338 99.00 0.1405 . . 315 . . . . . 'X-RAY DIFFRACTION' . 1.0648 1.0794 2797 0.1295 99.00 0.1383 . . 297 . . . . . 'X-RAY DIFFRACTION' . 1.0794 1.0948 2812 0.1231 99.00 0.1350 . . 328 . . . . . 'X-RAY DIFFRACTION' . 1.0948 1.1112 2803 0.1188 99.00 0.1400 . . 294 . . . . . 'X-RAY DIFFRACTION' . 1.1112 1.1286 2807 0.1142 99.00 0.1335 . . 309 . . . . . 'X-RAY DIFFRACTION' . 1.1286 1.1471 2795 0.1106 99.00 0.1295 . . 322 . . . . . 'X-RAY DIFFRACTION' . 1.1471 1.1668 2830 0.1091 99.00 0.1225 . . 285 . . . . . 'X-RAY DIFFRACTION' . 1.1668 1.1881 2781 0.1175 100.00 0.1281 . . 333 . . . . . 'X-RAY DIFFRACTION' . 1.1881 1.2109 2825 0.1137 100.00 0.1390 . . 305 . . . . . 'X-RAY DIFFRACTION' . 1.2109 1.2356 2811 0.1211 100.00 0.1233 . . 316 . . . . . 'X-RAY DIFFRACTION' . 1.2356 1.2625 2795 0.1193 100.00 0.1424 . . 325 . . . . . 'X-RAY DIFFRACTION' . 1.2625 1.2919 2819 0.1267 99.00 0.1465 . . 306 . . . . . 'X-RAY DIFFRACTION' . 1.2919 1.3242 2774 0.1231 99.00 0.1398 . . 324 . . . . . 'X-RAY DIFFRACTION' . 1.3242 1.3600 2842 0.1221 99.00 0.1342 . . 298 . . . . . 'X-RAY DIFFRACTION' . 1.3600 1.4000 2814 0.1221 99.00 0.1331 . . 316 . . . . . 'X-RAY DIFFRACTION' . 1.4000 1.4452 2803 0.1245 99.00 0.1443 . . 339 . . . . . 'X-RAY DIFFRACTION' . 1.4452 1.4968 2818 0.1289 99.00 0.1305 . . 308 . . . . . 'X-RAY DIFFRACTION' . 1.4968 1.5567 2831 0.1277 100.00 0.1373 . . 317 . . . . . 'X-RAY DIFFRACTION' . 1.5567 1.6276 2846 0.1285 100.00 0.1457 . . 319 . . . . . 'X-RAY DIFFRACTION' . 1.6276 1.7134 2859 0.1325 100.00 0.1378 . . 329 . . . . . 'X-RAY DIFFRACTION' . 1.7134 1.8207 2857 0.1417 100.00 0.1513 . . 308 . . . . . 'X-RAY DIFFRACTION' . 1.8207 1.9613 2879 0.1392 100.00 0.1493 . . 315 . . . . . 'X-RAY DIFFRACTION' . 1.9613 2.1586 2896 0.1350 100.00 0.1477 . . 312 . . . . . 'X-RAY DIFFRACTION' . 2.1586 2.4708 2911 0.1436 100.00 0.1388 . . 320 . . . . . 'X-RAY DIFFRACTION' . 2.4708 3.1123 2946 0.1374 100.00 0.1640 . . 324 . . . . . 'X-RAY DIFFRACTION' . 3.1123 28.2442 3031 0.1400 99.00 0.1777 . . 331 . . . . . # _struct.entry_id 3X2O _struct.title 'Neutron and X-ray joint refined structure of PcCel45A apo form at 298K.' _struct.pdbx_descriptor 'Endoglucanase V-like protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3X2O _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text Hydrolase # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 1 ? TYR A 5 ? ALA A 1 TYR A 5 5 ? 5 HELX_P HELX_P2 2 GLN A 39 ? GLY A 43 ? GLN A 39 GLY A 43 1 ? 5 HELX_P HELX_P3 3 41Q A 92 ? GLY A 97 ? 41Q A 92 GLY A 97 1 ? 6 HELX_P HELX_P4 4 GLY A 120 ? PHE A 126 ? GLY A 120 PHE A 126 1 ? 7 HELX_P HELX_P5 5 SER A 141 ? TRP A 145 ? SER A 141 TRP A 145 5 ? 5 HELX_P HELX_P6 6 LEU A 159 ? ALA A 164 ? LEU A 159 ALA A 164 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 116 SG ? ? A CYS 21 A CYS 116 1_555 ? ? ? ? ? ? ? 2.014 ? disulf2 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 54 SG ? ? A CYS 26 A CYS 54 1_555 ? ? ? ? ? ? ? 2.029 ? disulf3 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 142 SG ? ? A CYS 57 A CYS 142 1_555 ? ? ? ? ? ? ? 2.032 ? disulf4 disulf ? ? A CYS 87 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 87 A CYS 96 1_555 ? ? ? ? ? ? ? 2.020 ? disulf5 disulf ? ? A CYS 158 SG ? ? ? 1_555 A CYS 172 SG ? ? A CYS 158 A CYS 172 1_555 ? ? ? ? ? ? ? 2.030 ? covale1 covale both ? A GLY 91 C ? ? ? 1_555 A 41Q 92 N ? ? A GLY 91 A 41Q 92 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale both ? A 41Q 92 C ? ? ? 1_555 A GLN 93 N ? ? A 41Q 92 A GLN 93 1_555 ? ? ? ? ? ? ? 1.324 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 73 A . ? GLY 73 A PRO 74 A ? PRO 74 A 1 1.27 2 TRP 167 A . ? TRP 167 A PRO 168 A ? PRO 168 A 1 1.72 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 10 ? TYR A 18 ? THR A 10 TYR A 18 A 2 PHE A 111 ? CYS A 116 ? PHE A 111 CYS A 116 A 3 THR A 34 ? ASN A 38 ? THR A 34 ASN A 38 A 4 ILE A 79 ? CYS A 87 ? ILE A 79 CYS A 87 A 5 CYS A 57 ? HIS A 64 ? CYS A 57 HIS A 64 A 6 LEU A 133 ? VAL A 140 ? LEU A 133 VAL A 140 A 7 THR A 10 ? TYR A 18 ? THR A 10 TYR A 18 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 16 ? N THR A 16 O ILE A 115 ? O ILE A 115 A 2 3 O ASP A 114 ? O ASP A 114 N ALA A 36 ? N ALA A 36 A 3 4 N ILE A 37 ? N ILE A 37 O CYS A 87 ? O CYS A 87 A 4 5 O ILE A 79 ? O ILE A 79 N LEU A 60 ? N LEU A 60 A 5 6 N ALA A 59 ? N ALA A 59 O THR A 138 ? O THR A 138 A 6 7 O LEU A 133 ? O LEU A 133 N PHE A 15 ? N PHE A 15 # _database_PDB_matrix.entry_id 3X2O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3X2O _atom_sites.fract_transf_matrix[1][1] 0.021668 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016930 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015556 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C D H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 HIS 64 64 64 HIS HIS A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 CYS 87 87 87 CYS CYS A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 41Q 92 92 92 41Q 41Q A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 MET 109 109 109 MET MET A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 CYS 116 116 116 CYS CYS A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 ASP 118 118 118 ASP ASP A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 HIS 130 130 130 HIS HIS A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 THR 138 138 138 THR THR A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 CYS 142 142 142 CYS CYS A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 TRP 145 145 145 TRP TRP A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 SER 148 148 148 SER SER A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 GLN 152 152 152 GLN GLN A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 TRP 154 154 154 TRP TRP A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 CYS 158 158 158 CYS CYS A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 ASN 166 166 166 ASN ASN A . n A 1 167 TRP 167 167 167 TRP TRP A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 ALA 171 171 171 ALA ALA A . n A 1 172 CYS 172 172 172 CYS CYS A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 ASN 174 174 174 ASN ASN A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 THR 177 177 177 THR THR A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 PRO 179 179 179 PRO PRO A . n A 1 180 SER 180 180 180 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DOD 1 201 1 DOD HOH A . B 2 DOD 2 202 2 DOD HOH A . B 2 DOD 3 203 3 DOD HOH A . B 2 DOD 4 204 4 DOD HOH A . B 2 DOD 5 205 5 DOD HOH A . B 2 DOD 6 206 6 DOD HOH A . B 2 DOD 7 207 7 DOD HOH A . B 2 DOD 8 208 8 DOD HOH A . B 2 DOD 9 209 9 DOD HOH A . B 2 DOD 10 210 10 DOD HOH A . B 2 DOD 11 211 11 DOD HOH A . B 2 DOD 12 212 12 DOD HOH A . B 2 DOD 13 213 13 DOD HOH A . B 2 DOD 14 214 14 DOD HOH A . B 2 DOD 15 215 15 DOD HOH A . B 2 DOD 16 216 16 DOD HOH A . B 2 DOD 17 217 17 DOD HOH A . B 2 DOD 18 218 18 DOD HOH A . B 2 DOD 19 219 19 DOD HOH A . B 2 DOD 20 220 20 DOD HOH A . B 2 DOD 21 221 21 DOD HOH A . B 2 DOD 22 222 22 DOD HOH A . B 2 DOD 23 223 23 DOD HOH A . B 2 DOD 24 224 24 DOD HOH A . B 2 DOD 25 225 25 DOD HOH A . B 2 DOD 26 226 26 DOD HOH A . B 2 DOD 27 227 27 DOD HOH A . B 2 DOD 28 228 28 DOD HOH A . B 2 DOD 29 229 29 DOD HOH A . B 2 DOD 30 230 30 DOD HOH A . B 2 DOD 31 231 31 DOD HOH A . B 2 DOD 32 232 32 DOD HOH A . B 2 DOD 33 233 33 DOD HOH A . B 2 DOD 34 234 34 DOD HOH A . B 2 DOD 35 235 35 DOD HOH A . B 2 DOD 36 236 36 DOD HOH A . B 2 DOD 37 237 37 DOD HOH A . B 2 DOD 38 238 38 DOD HOH A . B 2 DOD 39 239 39 DOD HOH A . B 2 DOD 40 240 40 DOD HOH A . B 2 DOD 41 241 41 DOD HOH A . B 2 DOD 42 242 42 DOD HOH A . B 2 DOD 43 243 43 DOD HOH A . B 2 DOD 44 244 44 DOD HOH A . B 2 DOD 45 245 45 DOD HOH A . B 2 DOD 46 246 46 DOD HOH A . B 2 DOD 47 247 47 DOD HOH A . B 2 DOD 48 248 48 DOD HOH A . B 2 DOD 49 249 49 DOD HOH A . B 2 DOD 50 250 50 DOD HOH A . B 2 DOD 51 251 51 DOD HOH A . B 2 DOD 52 252 52 DOD HOH A . B 2 DOD 53 253 53 DOD HOH A . B 2 DOD 54 254 54 DOD HOH A . B 2 DOD 55 255 55 DOD HOH A . B 2 DOD 56 256 56 DOD HOH A . B 2 DOD 57 257 57 DOD HOH A . B 2 DOD 58 258 58 DOD HOH A . B 2 DOD 59 259 59 DOD HOH A . B 2 DOD 60 260 60 DOD HOH A . B 2 DOD 61 261 61 DOD HOH A . B 2 DOD 62 262 62 DOD HOH A . B 2 DOD 63 263 63 DOD HOH A . B 2 DOD 64 264 64 DOD HOH A . B 2 DOD 65 265 65 DOD HOH A . B 2 DOD 66 266 66 DOD HOH A . B 2 DOD 67 267 67 DOD HOH A . B 2 DOD 68 268 68 DOD HOH A . B 2 DOD 69 269 69 DOD HOH A . B 2 DOD 70 270 70 DOD HOH A . B 2 DOD 71 271 71 DOD HOH A . B 2 DOD 72 272 72 DOD HOH A . B 2 DOD 73 273 73 DOD HOH A . B 2 DOD 74 274 74 DOD HOH A . B 2 DOD 75 275 75 DOD HOH A . B 2 DOD 76 276 76 DOD HOH A . B 2 DOD 77 277 78 DOD HOH A . B 2 DOD 78 278 77 DOD HOH A . B 2 DOD 79 279 79 DOD HOH A . B 2 DOD 80 280 80 DOD HOH A . B 2 DOD 81 281 81 DOD HOH A . B 2 DOD 82 282 82 DOD HOH A . B 2 DOD 83 283 83 DOD HOH A . B 2 DOD 84 284 84 DOD HOH A . B 2 DOD 85 285 85 DOD HOH A . B 2 DOD 86 286 86 DOD HOH A . B 2 DOD 87 287 87 DOD HOH A . B 2 DOD 88 288 88 DOD HOH A . B 2 DOD 89 289 89 DOD HOH A . B 2 DOD 90 290 90 DOD HOH A . B 2 DOD 91 291 91 DOD HOH A . B 2 DOD 92 292 92 DOD HOH A . B 2 DOD 93 293 93 DOD HOH A . B 2 DOD 94 294 94 DOD HOH A . B 2 DOD 95 295 95 DOD HOH A . B 2 DOD 96 296 96 DOD HOH A . B 2 DOD 97 297 97 DOD HOH A . B 2 DOD 98 298 98 DOD HOH A . B 2 DOD 99 299 99 DOD HOH A . B 2 DOD 100 300 100 DOD HOH A . B 2 DOD 101 301 101 DOD HOH A . B 2 DOD 102 302 102 DOD HOH A . B 2 DOD 103 303 103 DOD HOH A . B 2 DOD 104 304 104 DOD HOH A . B 2 DOD 105 305 105 DOD HOH A . B 2 DOD 106 306 106 DOD HOH A . B 2 DOD 107 307 107 DOD HOH A . B 2 DOD 108 308 108 DOD HOH A . B 2 DOD 109 309 109 DOD HOH A . B 2 DOD 110 310 110 DOD HOH A . B 2 DOD 111 311 111 DOD HOH A . B 2 DOD 112 312 112 DOD HOH A . B 2 DOD 113 313 113 DOD HOH A . B 2 DOD 114 314 114 DOD HOH A . B 2 DOD 115 315 115 DOD HOH A . B 2 DOD 116 316 116 DOD HOH A . B 2 DOD 117 317 117 DOD HOH A . B 2 DOD 118 318 118 DOD HOH A . B 2 DOD 119 319 119 DOD HOH A . B 2 DOD 120 320 120 DOD HOH A . B 2 DOD 121 321 121 DOD HOH A . B 2 DOD 122 322 122 DOD HOH A . B 2 DOD 123 323 123 DOD HOH A . B 2 DOD 124 324 124 DOD HOH A . B 2 DOD 125 325 125 DOD HOH A . B 2 DOD 126 326 126 DOD HOH A . B 2 DOD 127 327 127 DOD HOH A . B 2 DOD 128 328 128 DOD HOH A . B 2 DOD 129 329 129 DOD HOH A . B 2 DOD 130 330 130 DOD HOH A . B 2 DOD 131 331 131 DOD HOH A . B 2 DOD 132 332 133 DOD HOH A . B 2 DOD 133 333 134 DOD HOH A . B 2 DOD 134 334 135 DOD HOH A . B 2 DOD 135 335 136 DOD HOH A . B 2 DOD 136 336 137 DOD HOH A . B 2 DOD 137 337 138 DOD HOH A . B 2 DOD 138 338 139 DOD HOH A . B 2 DOD 139 339 140 DOD HOH A . B 2 DOD 140 340 141 DOD HOH A . B 2 DOD 141 341 142 DOD HOH A . B 2 DOD 142 342 143 DOD HOH A . B 2 DOD 143 343 144 DOD HOH A . B 2 DOD 144 344 145 DOD HOH A . B 2 DOD 145 345 146 DOD HOH A . B 2 DOD 146 346 147 DOD HOH A . B 2 DOD 147 347 148 DOD HOH A . B 2 DOD 148 348 149 DOD HOH A . B 2 DOD 149 349 150 DOD HOH A . B 2 DOD 150 350 151 DOD HOH A . B 2 DOD 151 351 152 DOD HOH A . B 2 DOD 152 352 153 DOD HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id 41Q _pdbx_struct_mod_residue.label_seq_id 92 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id 41Q _pdbx_struct_mod_residue.auth_seq_id 92 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 4-IMINO-L-HOMOSERINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-10-07 2 'Structure model' 1 1 2018-03-07 3 'Structure model' 1 2 2018-05-16 4 'Structure model' 1 3 2019-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' diffrn_detector 2 3 'Structure model' diffrn_detector 3 3 'Structure model' diffrn_radiation 4 3 'Structure model' diffrn_radiation_wavelength 5 3 'Structure model' diffrn_source 6 4 'Structure model' citation 7 4 'Structure model' diffrn_radiation 8 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_detector.detector' 2 3 'Structure model' '_diffrn_detector.detector' 3 3 'Structure model' '_diffrn_detector.pdbx_collection_date' 4 3 'Structure model' '_diffrn_radiation.wavelength_id' 5 3 'Structure model' '_diffrn_source.pdbx_synchrotron_beamline' 6 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 7 3 'Structure model' '_diffrn_source.pdbx_wavelength_list' 8 3 'Structure model' '_diffrn_source.source' 9 3 'Structure model' '_diffrn_source.type' 10 4 'Structure model' '_citation.journal_abbrev' 11 4 'Structure model' '_citation.pdbx_database_id_PubMed' 12 4 'Structure model' '_citation.title' 13 4 'Structure model' '_diffrn_radiation.pdbx_monochromatic_or_laue_m_l' 14 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language PHENIX refinement '(phenix.refine: 1.9_1692)' ? 1 ? ? ? ? STARGAZER 'data reduction' . ? 2 ? ? ? ? STARGAZER 'data scaling' . ? 3 ? ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 67 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OE2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLU _pdbx_validate_close_contact.auth_seq_id_2 94 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.12 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 63 ? ? -144.88 11.99 2 1 ALA A 171 ? ? -127.52 -91.62 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 90 ? CG ? A GLN 90 CG 2 1 Y 1 A GLN 90 ? CD ? A GLN 90 CD 3 1 Y 1 A GLN 90 ? OE1 ? A GLN 90 OE1 4 1 Y 1 A GLN 90 ? NE2 ? A GLN 90 NE2 5 1 Y 1 A GLN 93 ? CG ? A GLN 93 CG 6 1 Y 1 A GLN 93 ? CD ? A GLN 93 CD 7 1 Y 1 A GLN 93 ? OE1 ? A GLN 93 OE1 8 1 Y 1 A GLN 93 ? NE2 ? A GLN 93 NE2 9 1 Y 1 A GLN 106 ? CG ? A GLN 106 CG 10 1 Y 1 A GLN 106 ? CD ? A GLN 106 CD 11 1 Y 1 A GLN 106 ? OE1 ? A GLN 106 OE1 12 1 Y 1 A GLN 106 ? NE2 ? A GLN 106 NE2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id DOD #