data_3YGS # _entry.id 3YGS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3YGS pdb_00003ygs 10.2210/pdb3ygs/pdb RCSB RCSB001025 ? ? WWPDB D_1000001025 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-04-19 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3YGS _pdbx_database_status.recvd_initial_deposition_date 1999-05-08 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2YGS _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Qin, H.' 1 'Srinivasula, S.' 2 'Wu, G.' 3 'Fernandes-Alnemri, T.' 4 'Alnemri, E.' 5 'Shi, Y.' 6 # _citation.id primary _citation.title 'Structural basis of procaspase-9 recruitment by the apoptotic protease-activating factor 1.' _citation.journal_abbrev Nature _citation.journal_volume 399 _citation.page_first 549 _citation.page_last 557 _citation.year 1999 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10376594 _citation.pdbx_database_id_DOI 10.1038/21124 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qin, H.' 1 ? primary 'Srinivasula, S.M.' 2 ? primary 'Wu, G.' 3 ? primary 'Fernandes-Alnemri, T.' 4 ? primary 'Alnemri, E.S.' 5 ? primary 'Shi, Y.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'APOPTOTIC PROTEASE ACTIVATING FACTOR 1' 10925.555 1 ? ? 'CASPASE RECRUITMENT DOMAIN (CARD)' ? 2 polymer man 'PROCASPASE 9' 11312.906 1 3.4.22.- ? PRODOMAIN ? 3 water nat water 18.015 173 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGY KDLAALLHDGIPVVS ; ;MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGY KDLAALLHDGIPVVS ; C ? 2 'polypeptide(L)' no no ;SMDEADRRLLRRCRLRLVEELQVDQLWDVLLSRELFRPHMIEDIQRAGSGSRRDQARQLIIDLETRGSQALPLFISCLED TGQDMLASFLRTNRQAG ; ;SMDEADRRLLRRCRLRLVEELQVDQLWDVLLSRELFRPHMIEDIQRAGSGSRRDQARQLIIDLETRGSQALPLFISCLED TGQDMLASFLRTNRQAG ; P ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 ALA n 1 4 LYS n 1 5 ALA n 1 6 ARG n 1 7 ASN n 1 8 CYS n 1 9 LEU n 1 10 LEU n 1 11 GLN n 1 12 HIS n 1 13 ARG n 1 14 GLU n 1 15 ALA n 1 16 LEU n 1 17 GLU n 1 18 LYS n 1 19 ASP n 1 20 ILE n 1 21 LYS n 1 22 THR n 1 23 SER n 1 24 TYR n 1 25 ILE n 1 26 MET n 1 27 ASP n 1 28 HIS n 1 29 MET n 1 30 ILE n 1 31 SER n 1 32 ASP n 1 33 GLY n 1 34 PHE n 1 35 LEU n 1 36 THR n 1 37 ILE n 1 38 SER n 1 39 GLU n 1 40 GLU n 1 41 GLU n 1 42 LYS n 1 43 VAL n 1 44 ARG n 1 45 ASN n 1 46 GLU n 1 47 PRO n 1 48 THR n 1 49 GLN n 1 50 GLN n 1 51 GLN n 1 52 ARG n 1 53 ALA n 1 54 ALA n 1 55 MET n 1 56 LEU n 1 57 ILE n 1 58 LYS n 1 59 MET n 1 60 ILE n 1 61 LEU n 1 62 LYS n 1 63 LYS n 1 64 ASP n 1 65 ASN n 1 66 ASP n 1 67 SER n 1 68 TYR n 1 69 VAL n 1 70 SER n 1 71 PHE n 1 72 TYR n 1 73 ASN n 1 74 ALA n 1 75 LEU n 1 76 LEU n 1 77 HIS n 1 78 GLU n 1 79 GLY n 1 80 TYR n 1 81 LYS n 1 82 ASP n 1 83 LEU n 1 84 ALA n 1 85 ALA n 1 86 LEU n 1 87 LEU n 1 88 HIS n 1 89 ASP n 1 90 GLY n 1 91 ILE n 1 92 PRO n 1 93 VAL n 1 94 VAL n 1 95 SER n 2 1 SER n 2 2 MET n 2 3 ASP n 2 4 GLU n 2 5 ALA n 2 6 ASP n 2 7 ARG n 2 8 ARG n 2 9 LEU n 2 10 LEU n 2 11 ARG n 2 12 ARG n 2 13 CYS n 2 14 ARG n 2 15 LEU n 2 16 ARG n 2 17 LEU n 2 18 VAL n 2 19 GLU n 2 20 GLU n 2 21 LEU n 2 22 GLN n 2 23 VAL n 2 24 ASP n 2 25 GLN n 2 26 LEU n 2 27 TRP n 2 28 ASP n 2 29 VAL n 2 30 LEU n 2 31 LEU n 2 32 SER n 2 33 ARG n 2 34 GLU n 2 35 LEU n 2 36 PHE n 2 37 ARG n 2 38 PRO n 2 39 HIS n 2 40 MET n 2 41 ILE n 2 42 GLU n 2 43 ASP n 2 44 ILE n 2 45 GLN n 2 46 ARG n 2 47 ALA n 2 48 GLY n 2 49 SER n 2 50 GLY n 2 51 SER n 2 52 ARG n 2 53 ARG n 2 54 ASP n 2 55 GLN n 2 56 ALA n 2 57 ARG n 2 58 GLN n 2 59 LEU n 2 60 ILE n 2 61 ILE n 2 62 ASP n 2 63 LEU n 2 64 GLU n 2 65 THR n 2 66 ARG n 2 67 GLY n 2 68 SER n 2 69 GLN n 2 70 ALA n 2 71 LEU n 2 72 PRO n 2 73 LEU n 2 74 PHE n 2 75 ILE n 2 76 SER n 2 77 CYS n 2 78 LEU n 2 79 GLU n 2 80 ASP n 2 81 THR n 2 82 GLY n 2 83 GLN n 2 84 ASP n 2 85 MET n 2 86 LEU n 2 87 ALA n 2 88 SER n 2 89 PHE n 2 90 LEU n 2 91 ARG n 2 92 THR n 2 93 ASN n 2 94 ARG n 2 95 GLN n 2 96 ALA n 2 97 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? CYTOPLASM ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? PGEX-2T ? ? 2 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? CYTOPLASM ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? PGEX-2T ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET C . n A 1 2 ASP 2 2 2 ASP ASP C . n A 1 3 ALA 3 3 3 ALA ALA C . n A 1 4 LYS 4 4 4 LYS LYS C . n A 1 5 ALA 5 5 5 ALA ALA C . n A 1 6 ARG 6 6 6 ARG ARG C . n A 1 7 ASN 7 7 7 ASN ASN C . n A 1 8 CYS 8 8 8 CYS CYS C . n A 1 9 LEU 9 9 9 LEU LEU C . n A 1 10 LEU 10 10 10 LEU LEU C . n A 1 11 GLN 11 11 11 GLN GLN C . n A 1 12 HIS 12 12 12 HIS HIS C . n A 1 13 ARG 13 13 13 ARG ARG C . n A 1 14 GLU 14 14 14 GLU GLU C . n A 1 15 ALA 15 15 15 ALA ALA C . n A 1 16 LEU 16 16 16 LEU LEU C . n A 1 17 GLU 17 17 17 GLU GLU C . n A 1 18 LYS 18 18 18 LYS LYS C . n A 1 19 ASP 19 19 19 ASP ASP C . n A 1 20 ILE 20 20 20 ILE ILE C . n A 1 21 LYS 21 21 21 LYS LYS C . n A 1 22 THR 22 22 22 THR THR C . n A 1 23 SER 23 23 23 SER SER C . n A 1 24 TYR 24 24 24 TYR TYR C . n A 1 25 ILE 25 25 25 ILE ILE C . n A 1 26 MET 26 26 26 MET MET C . n A 1 27 ASP 27 27 27 ASP ASP C . n A 1 28 HIS 28 28 28 HIS HIS C . n A 1 29 MET 29 29 29 MET MET C . n A 1 30 ILE 30 30 30 ILE ILE C . n A 1 31 SER 31 31 31 SER SER C . n A 1 32 ASP 32 32 32 ASP ASP C . n A 1 33 GLY 33 33 33 GLY GLY C . n A 1 34 PHE 34 34 34 PHE PHE C . n A 1 35 LEU 35 35 35 LEU LEU C . n A 1 36 THR 36 36 36 THR THR C . n A 1 37 ILE 37 37 37 ILE ILE C . n A 1 38 SER 38 38 38 SER SER C . n A 1 39 GLU 39 39 39 GLU GLU C . n A 1 40 GLU 40 40 40 GLU GLU C . n A 1 41 GLU 41 41 41 GLU GLU C . n A 1 42 LYS 42 42 42 LYS LYS C . n A 1 43 VAL 43 43 43 VAL VAL C . n A 1 44 ARG 44 44 44 ARG ARG C . n A 1 45 ASN 45 45 45 ASN ASN C . n A 1 46 GLU 46 46 46 GLU GLU C . n A 1 47 PRO 47 47 47 PRO PRO C . n A 1 48 THR 48 48 48 THR THR C . n A 1 49 GLN 49 49 49 GLN GLN C . n A 1 50 GLN 50 50 50 GLN GLN C . n A 1 51 GLN 51 51 51 GLN GLN C . n A 1 52 ARG 52 52 52 ARG ARG C . n A 1 53 ALA 53 53 53 ALA ALA C . n A 1 54 ALA 54 54 54 ALA ALA C . n A 1 55 MET 55 55 55 MET MET C . n A 1 56 LEU 56 56 56 LEU LEU C . n A 1 57 ILE 57 57 57 ILE ILE C . n A 1 58 LYS 58 58 58 LYS LYS C . n A 1 59 MET 59 59 59 MET MET C . n A 1 60 ILE 60 60 60 ILE ILE C . n A 1 61 LEU 61 61 61 LEU LEU C . n A 1 62 LYS 62 62 62 LYS LYS C . n A 1 63 LYS 63 63 63 LYS LYS C . n A 1 64 ASP 64 64 64 ASP ASP C . n A 1 65 ASN 65 65 65 ASN ASN C . n A 1 66 ASP 66 66 66 ASP ASP C . n A 1 67 SER 67 67 67 SER SER C . n A 1 68 TYR 68 68 68 TYR TYR C . n A 1 69 VAL 69 69 69 VAL VAL C . n A 1 70 SER 70 70 70 SER SER C . n A 1 71 PHE 71 71 71 PHE PHE C . n A 1 72 TYR 72 72 72 TYR TYR C . n A 1 73 ASN 73 73 73 ASN ASN C . n A 1 74 ALA 74 74 74 ALA ALA C . n A 1 75 LEU 75 75 75 LEU LEU C . n A 1 76 LEU 76 76 76 LEU LEU C . n A 1 77 HIS 77 77 77 HIS HIS C . n A 1 78 GLU 78 78 78 GLU GLU C . n A 1 79 GLY 79 79 79 GLY GLY C . n A 1 80 TYR 80 80 80 TYR TYR C . n A 1 81 LYS 81 81 81 LYS LYS C . n A 1 82 ASP 82 82 82 ASP ASP C . n A 1 83 LEU 83 83 83 LEU LEU C . n A 1 84 ALA 84 84 84 ALA ALA C . n A 1 85 ALA 85 85 85 ALA ALA C . n A 1 86 LEU 86 86 86 LEU LEU C . n A 1 87 LEU 87 87 87 LEU LEU C . n A 1 88 HIS 88 88 88 HIS HIS C . n A 1 89 ASP 89 89 89 ASP ASP C . n A 1 90 GLY 90 90 90 GLY GLY C . n A 1 91 ILE 91 91 91 ILE ILE C . n A 1 92 PRO 92 92 92 PRO PRO C . n A 1 93 VAL 93 93 93 VAL VAL C . n A 1 94 VAL 94 94 94 VAL VAL C . n A 1 95 SER 95 95 95 SER SER C . n B 2 1 SER 1 1 1 SER SER P . n B 2 2 MET 2 2 2 MET MET P . n B 2 3 ASP 3 3 3 ASP ASP P . n B 2 4 GLU 4 4 4 GLU GLU P . n B 2 5 ALA 5 5 5 ALA ALA P . n B 2 6 ASP 6 6 6 ASP ASP P . n B 2 7 ARG 7 7 7 ARG ARG P . n B 2 8 ARG 8 8 8 ARG ARG P . n B 2 9 LEU 9 9 9 LEU LEU P . n B 2 10 LEU 10 10 10 LEU LEU P . n B 2 11 ARG 11 11 11 ARG ARG P . n B 2 12 ARG 12 12 12 ARG ARG P . n B 2 13 CYS 13 13 13 CYS CYS P . n B 2 14 ARG 14 14 14 ARG ARG P . n B 2 15 LEU 15 15 15 LEU LEU P . n B 2 16 ARG 16 16 16 ARG ARG P . n B 2 17 LEU 17 17 17 LEU LEU P . n B 2 18 VAL 18 18 18 VAL VAL P . n B 2 19 GLU 19 19 19 GLU GLU P . n B 2 20 GLU 20 20 20 GLU GLU P . n B 2 21 LEU 21 21 21 LEU LEU P . n B 2 22 GLN 22 22 22 GLN GLN P . n B 2 23 VAL 23 23 23 VAL VAL P . n B 2 24 ASP 24 24 24 ASP ASP P . n B 2 25 GLN 25 25 25 GLN GLN P . n B 2 26 LEU 26 26 26 LEU LEU P . n B 2 27 TRP 27 27 27 TRP TRP P . n B 2 28 ASP 28 28 28 ASP ASP P . n B 2 29 VAL 29 29 29 VAL VAL P . n B 2 30 LEU 30 30 30 LEU LEU P . n B 2 31 LEU 31 31 31 LEU LEU P . n B 2 32 SER 32 32 32 SER SER P . n B 2 33 ARG 33 33 33 ARG ARG P . n B 2 34 GLU 34 34 34 GLU GLU P . n B 2 35 LEU 35 35 35 LEU LEU P . n B 2 36 PHE 36 36 36 PHE PHE P . n B 2 37 ARG 37 37 37 ARG ARG P . n B 2 38 PRO 38 38 38 PRO PRO P . n B 2 39 HIS 39 39 39 HIS HIS P . n B 2 40 MET 40 40 40 MET MET P . n B 2 41 ILE 41 41 41 ILE ILE P . n B 2 42 GLU 42 42 42 GLU GLU P . n B 2 43 ASP 43 43 43 ASP ASP P . n B 2 44 ILE 44 44 44 ILE ILE P . n B 2 45 GLN 45 45 45 GLN GLN P . n B 2 46 ARG 46 46 46 ARG ARG P . n B 2 47 ALA 47 47 47 ALA ALA P . n B 2 48 GLY 48 48 48 GLY GLY P . n B 2 49 SER 49 49 49 SER SER P . n B 2 50 GLY 50 50 50 GLY GLY P . n B 2 51 SER 51 51 51 SER SER P . n B 2 52 ARG 52 52 52 ARG ARG P . n B 2 53 ARG 53 53 53 ARG ARG P . n B 2 54 ASP 54 54 54 ASP ASP P . n B 2 55 GLN 55 55 55 GLN GLN P . n B 2 56 ALA 56 56 56 ALA ALA P . n B 2 57 ARG 57 57 57 ARG ARG P . n B 2 58 GLN 58 58 58 GLN GLN P . n B 2 59 LEU 59 59 59 LEU LEU P . n B 2 60 ILE 60 60 60 ILE ILE P . n B 2 61 ILE 61 61 61 ILE ILE P . n B 2 62 ASP 62 62 62 ASP ASP P . n B 2 63 LEU 63 63 63 LEU LEU P . n B 2 64 GLU 64 64 64 GLU GLU P . n B 2 65 THR 65 65 65 THR THR P . n B 2 66 ARG 66 66 66 ARG ARG P . n B 2 67 GLY 67 67 67 GLY GLY P . n B 2 68 SER 68 68 68 SER SER P . n B 2 69 GLN 69 69 69 GLN GLN P . n B 2 70 ALA 70 70 70 ALA ALA P . n B 2 71 LEU 71 71 71 LEU LEU P . n B 2 72 PRO 72 72 72 PRO PRO P . n B 2 73 LEU 73 73 73 LEU LEU P . n B 2 74 PHE 74 74 74 PHE PHE P . n B 2 75 ILE 75 75 75 ILE ILE P . n B 2 76 SER 76 76 76 SER SER P . n B 2 77 CYS 77 77 77 CYS CYS P . n B 2 78 LEU 78 78 78 LEU LEU P . n B 2 79 GLU 79 79 79 GLU GLU P . n B 2 80 ASP 80 80 80 ASP ASP P . n B 2 81 THR 81 81 81 THR THR P . n B 2 82 GLY 82 82 82 GLY GLY P . n B 2 83 GLN 83 83 83 GLN GLN P . n B 2 84 ASP 84 84 84 ASP ASP P . n B 2 85 MET 85 85 85 MET MET P . n B 2 86 LEU 86 86 86 LEU LEU P . n B 2 87 ALA 87 87 87 ALA ALA P . n B 2 88 SER 88 88 88 SER SER P . n B 2 89 PHE 89 89 89 PHE PHE P . n B 2 90 LEU 90 90 90 LEU LEU P . n B 2 91 ARG 91 91 91 ARG ARG P . n B 2 92 THR 92 92 92 THR THR P . n B 2 93 ASN 93 93 93 ASN ASN P . n B 2 94 ARG 94 94 94 ARG ARG P . n B 2 95 GLN 95 95 95 GLN GLN P . n B 2 96 ALA 96 96 96 ALA ALA P . n B 2 97 GLY 97 97 97 GLY GLY P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 96 4 HOH HOH C . C 3 HOH 2 97 7 HOH HOH C . C 3 HOH 3 98 10 HOH HOH C . C 3 HOH 4 99 11 HOH HOH C . C 3 HOH 5 100 13 HOH HOH C . C 3 HOH 6 101 16 HOH HOH C . C 3 HOH 7 102 18 HOH HOH C . C 3 HOH 8 103 23 HOH HOH C . C 3 HOH 9 104 24 HOH HOH C . C 3 HOH 10 105 26 HOH HOH C . C 3 HOH 11 106 28 HOH HOH C . C 3 HOH 12 107 29 HOH HOH C . C 3 HOH 13 108 31 HOH HOH C . C 3 HOH 14 109 34 HOH HOH C . C 3 HOH 15 110 38 HOH HOH C . C 3 HOH 16 111 40 HOH HOH C . C 3 HOH 17 112 46 HOH HOH C . C 3 HOH 18 113 49 HOH HOH C . C 3 HOH 19 114 52 HOH HOH C . C 3 HOH 20 115 54 HOH HOH C . C 3 HOH 21 116 55 HOH HOH C . C 3 HOH 22 117 58 HOH HOH C . C 3 HOH 23 118 63 HOH HOH C . C 3 HOH 24 119 67 HOH HOH C . C 3 HOH 25 120 68 HOH HOH C . C 3 HOH 26 121 73 HOH HOH C . C 3 HOH 27 122 76 HOH HOH C . C 3 HOH 28 123 77 HOH HOH C . C 3 HOH 29 124 79 HOH HOH C . C 3 HOH 30 125 80 HOH HOH C . C 3 HOH 31 126 81 HOH HOH C . C 3 HOH 32 127 85 HOH HOH C . C 3 HOH 33 128 89 HOH HOH C . C 3 HOH 34 129 92 HOH HOH C . C 3 HOH 35 130 98 HOH HOH C . C 3 HOH 36 131 101 HOH HOH C . C 3 HOH 37 132 103 HOH HOH C . C 3 HOH 38 133 105 HOH HOH C . C 3 HOH 39 134 110 HOH HOH C . C 3 HOH 40 135 111 HOH HOH C . C 3 HOH 41 136 112 HOH HOH C . C 3 HOH 42 137 114 HOH HOH C . C 3 HOH 43 138 115 HOH HOH C . C 3 HOH 44 139 116 HOH HOH C . C 3 HOH 45 140 119 HOH HOH C . C 3 HOH 46 141 120 HOH HOH C . C 3 HOH 47 142 121 HOH HOH C . C 3 HOH 48 143 124 HOH HOH C . C 3 HOH 49 144 125 HOH HOH C . C 3 HOH 50 145 126 HOH HOH C . C 3 HOH 51 146 128 HOH HOH C . C 3 HOH 52 147 130 HOH HOH C . C 3 HOH 53 148 132 HOH HOH C . C 3 HOH 54 149 133 HOH HOH C . C 3 HOH 55 150 134 HOH HOH C . C 3 HOH 56 151 136 HOH HOH C . C 3 HOH 57 152 138 HOH HOH C . C 3 HOH 58 153 139 HOH HOH C . C 3 HOH 59 154 141 HOH HOH C . C 3 HOH 60 155 142 HOH HOH C . C 3 HOH 61 156 145 HOH HOH C . C 3 HOH 62 157 147 HOH HOH C . C 3 HOH 63 158 148 HOH HOH C . C 3 HOH 64 159 151 HOH HOH C . C 3 HOH 65 160 155 HOH HOH C . C 3 HOH 66 161 156 HOH HOH C . C 3 HOH 67 162 157 HOH HOH C . C 3 HOH 68 163 158 HOH HOH C . C 3 HOH 69 164 159 HOH HOH C . C 3 HOH 70 165 163 HOH HOH C . C 3 HOH 71 166 164 HOH HOH C . C 3 HOH 72 167 166 HOH HOH C . C 3 HOH 73 168 167 HOH HOH C . C 3 HOH 74 169 171 HOH HOH C . C 3 HOH 75 170 172 HOH HOH C . D 3 HOH 1 98 1 HOH HOH P . D 3 HOH 2 99 2 HOH HOH P . D 3 HOH 3 100 3 HOH HOH P . D 3 HOH 4 101 5 HOH HOH P . D 3 HOH 5 102 6 HOH HOH P . D 3 HOH 6 103 8 HOH HOH P . D 3 HOH 7 104 9 HOH HOH P . D 3 HOH 8 105 12 HOH HOH P . D 3 HOH 9 106 14 HOH HOH P . D 3 HOH 10 107 15 HOH HOH P . D 3 HOH 11 108 17 HOH HOH P . D 3 HOH 12 109 19 HOH HOH P . D 3 HOH 13 110 20 HOH HOH P . D 3 HOH 14 111 21 HOH HOH P . D 3 HOH 15 112 22 HOH HOH P . D 3 HOH 16 113 25 HOH HOH P . D 3 HOH 17 114 27 HOH HOH P . D 3 HOH 18 115 30 HOH HOH P . D 3 HOH 19 116 32 HOH HOH P . D 3 HOH 20 117 33 HOH HOH P . D 3 HOH 21 118 35 HOH HOH P . D 3 HOH 22 119 36 HOH HOH P . D 3 HOH 23 120 37 HOH HOH P . D 3 HOH 24 121 39 HOH HOH P . D 3 HOH 25 122 41 HOH HOH P . D 3 HOH 26 123 42 HOH HOH P . D 3 HOH 27 124 43 HOH HOH P . D 3 HOH 28 125 44 HOH HOH P . D 3 HOH 29 126 45 HOH HOH P . D 3 HOH 30 127 47 HOH HOH P . D 3 HOH 31 128 48 HOH HOH P . D 3 HOH 32 129 50 HOH HOH P . D 3 HOH 33 130 51 HOH HOH P . D 3 HOH 34 131 53 HOH HOH P . D 3 HOH 35 132 56 HOH HOH P . D 3 HOH 36 133 57 HOH HOH P . D 3 HOH 37 134 59 HOH HOH P . D 3 HOH 38 135 60 HOH HOH P . D 3 HOH 39 136 61 HOH HOH P . D 3 HOH 40 137 62 HOH HOH P . D 3 HOH 41 138 64 HOH HOH P . D 3 HOH 42 139 65 HOH HOH P . D 3 HOH 43 140 66 HOH HOH P . D 3 HOH 44 141 69 HOH HOH P . D 3 HOH 45 142 70 HOH HOH P . D 3 HOH 46 143 71 HOH HOH P . D 3 HOH 47 144 72 HOH HOH P . D 3 HOH 48 145 74 HOH HOH P . D 3 HOH 49 146 75 HOH HOH P . D 3 HOH 50 147 78 HOH HOH P . D 3 HOH 51 148 82 HOH HOH P . D 3 HOH 52 149 83 HOH HOH P . D 3 HOH 53 150 84 HOH HOH P . D 3 HOH 54 151 86 HOH HOH P . D 3 HOH 55 152 87 HOH HOH P . D 3 HOH 56 153 88 HOH HOH P . D 3 HOH 57 154 90 HOH HOH P . D 3 HOH 58 155 91 HOH HOH P . D 3 HOH 59 156 93 HOH HOH P . D 3 HOH 60 157 94 HOH HOH P . D 3 HOH 61 158 95 HOH HOH P . D 3 HOH 62 159 96 HOH HOH P . D 3 HOH 63 160 97 HOH HOH P . D 3 HOH 64 161 99 HOH HOH P . D 3 HOH 65 162 100 HOH HOH P . D 3 HOH 66 163 102 HOH HOH P . D 3 HOH 67 164 104 HOH HOH P . D 3 HOH 68 165 106 HOH HOH P . D 3 HOH 69 166 107 HOH HOH P . D 3 HOH 70 167 108 HOH HOH P . D 3 HOH 71 168 109 HOH HOH P . D 3 HOH 72 169 113 HOH HOH P . D 3 HOH 73 170 118 HOH HOH P . D 3 HOH 74 171 122 HOH HOH P . D 3 HOH 75 172 123 HOH HOH P . D 3 HOH 76 173 127 HOH HOH P . D 3 HOH 77 174 129 HOH HOH P . D 3 HOH 78 175 131 HOH HOH P . D 3 HOH 79 176 135 HOH HOH P . D 3 HOH 80 177 137 HOH HOH P . D 3 HOH 81 178 140 HOH HOH P . D 3 HOH 82 179 143 HOH HOH P . D 3 HOH 83 180 144 HOH HOH P . D 3 HOH 84 181 146 HOH HOH P . D 3 HOH 85 182 149 HOH HOH P . D 3 HOH 86 183 150 HOH HOH P . D 3 HOH 87 184 152 HOH HOH P . D 3 HOH 88 185 153 HOH HOH P . D 3 HOH 89 186 154 HOH HOH P . D 3 HOH 90 187 160 HOH HOH P . D 3 HOH 91 188 161 HOH HOH P . D 3 HOH 92 189 162 HOH HOH P . D 3 HOH 93 190 165 HOH HOH P . D 3 HOH 94 191 168 HOH HOH P . D 3 HOH 95 192 169 HOH HOH P . D 3 HOH 96 193 170 HOH HOH P . D 3 HOH 97 194 173 HOH HOH P . D 3 HOH 98 195 174 HOH HOH P . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement 3.8 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 # _cell.entry_id 3YGS _cell.length_a 92.500 _cell.length_b 92.500 _cell.length_c 136.800 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3YGS _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 # _exptl.entry_id 3YGS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.80 _exptl_crystal.density_percent_sol 65 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'pH 7.5' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3YGS _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 99.0 _reflns.d_resolution_high 2.5 _reflns.number_obs 134080 _reflns.number_all ? _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.0560000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 93.2 _reflns_shell.Rmerge_I_obs 0.1770000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3YGS _refine.ls_number_reflns_obs 12211 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 2.5 _refine.ls_percent_reflns_obs 98 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2240000 _refine.ls_R_factor_R_free 0.2990000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 600 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1553 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 173 _refine_hist.number_atoms_total 1726 _refine_hist.d_res_high 2.5 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.447 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.5 _refine_ls_shell.d_res_low 2.61 _refine_ls_shell.number_reflns_R_work 1326 _refine_ls_shell.R_factor_R_work 0.3500000 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.4600000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.0 _refine_ls_shell.number_reflns_R_free 76 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 3YGS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3YGS _struct.title 'APAF-1 CARD IN COMPLEX WITH PRODOMAIN OF PROCASPASE-9' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3YGS _struct_keywords.pdbx_keywords APOPTOSIS _struct_keywords.text 'APOPTOSIS, CASPASE ACTIVATION, CASPASE RECRUITMENT, RECOGNITION COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP APAF_HUMAN 1 O14727 ? ? ? 2 UNP CASP9_HUMAN 2 P55211 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3YGS C 1 ? 95 ? O14727 1 ? 95 ? 1 95 2 2 3YGS P 2 ? 97 ? P55211 1 ? 96 ? 2 97 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 3YGS _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id P _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P55211 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'cloning artifact' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 3 ? GLU A 17 ? ALA C 3 GLU C 17 1 ? 15 HELX_P HELX_P2 2 THR A 22 ? ASP A 32 ? THR C 22 ASP C 32 1 ? 11 HELX_P HELX_P3 3 ILE A 37 ? ARG A 44 ? ILE C 37 ARG C 44 1 ? 8 HELX_P HELX_P4 4 GLN A 49 ? LYS A 62 ? GLN C 49 LYS C 62 1 ? 14 HELX_P HELX_P5 5 ASN A 65 ? HIS A 77 ? ASN C 65 HIS C 77 1 ? 13 HELX_P HELX_P6 6 LYS A 81 ? GLY A 90 ? LYS C 81 GLY C 90 1 ? 10 HELX_P HELX_P7 7 GLU B 4 ? ARG B 12 ? GLU P 4 ARG P 12 1 ? 9 HELX_P HELX_P8 8 ARG B 14 ? GLU B 20 ? ARG P 14 GLU P 20 1 ? 7 HELX_P HELX_P9 9 TRP B 27 ? SER B 32 ? TRP P 27 SER P 32 1 ? 6 HELX_P HELX_P10 10 PRO B 38 ? GLN B 45 ? PRO P 38 GLN P 45 1 ? 8 HELX_P HELX_P11 11 ARG B 52 ? THR B 65 ? ARG P 52 THR P 65 1 ? 14 HELX_P HELX_P12 12 ALA B 70 ? THR B 81 ? ALA P 70 THR P 81 1 ? 12 HELX_P HELX_P13 13 ASP B 84 ? GLN B 95 ? ASP P 84 GLN P 95 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 P _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 151 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 P _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 151 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 11_656 _pdbx_validate_symm_contact.dist 2.03 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP C 2 ? ? -49.90 154.14 2 1 ASP C 19 ? ? -136.20 -40.73 3 1 ILE C 91 ? ? 154.16 -8.28 4 1 VAL C 94 ? ? 57.05 -179.46 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3YGS _atom_sites.fract_transf_matrix[1][1] 0.010811 _atom_sites.fract_transf_matrix[1][2] 0.006242 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012483 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007310 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_