data_3ZDC # _entry.id 3ZDC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ZDC pdb_00003zdc 10.2210/pdb3zdc/pdb PDBE EBI-54864 ? ? WWPDB D_1290054864 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-10 2 'Structure model' 1 1 2013-07-17 3 'Structure model' 1 2 2013-10-09 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.value' 22 4 'Structure model' '_struct_conn.pdbx_dist_value' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZDC _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-11-26 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3ZD8 unspecified 'POTASSIUM BOUND STRUCTURE OF E. COLI EXOIX IN P1' PDB 3ZD9 unspecified 'POTASSIUM BOUND STRUCTURE OF E. COLI EXOIX IN P21' PDB 3ZDA unspecified 'STRUCTURE OF E. COLI EXOIX IN COMPLEX WITH A FRAGMENT OF THE FLAP1 DNA OLIGOCULEOTIDE, POTASSIUM AND MAGNESIUM' PDB 3ZDB unspecified 'STRUCTURE OF E. COLI EXOIX IN COMPLEX WITH THE PALINDROMIC 5OV4 DNA OLIGONUCLEOTIDE, DI-MAGNESIUM AND POTASSIUM' PDB 3ZDD unspecified 'STRUCTURE OF E. COLI EXOIX IN COMPLEX WITH THE PALINDROMIC 5OV6 OLIGONUCLEOTIDE AND POTASSIUM' PDB 3ZDE unspecified 'POTASSIUM FREE STRUCTURE OF E. COLI EXOIX' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hemsworth, G.R.' 1 'Anstey-Gilbert, C.S.' 2 'Flemming, C.S.' 3 'Hodskinson, M.R.G.' 4 'Zhang, J.' 5 'Sedelnikova, S.E.' 6 'Stillman, T.J.' 7 'Sayers, J.R.' 8 'Artymiuk, P.J.' 9 # _citation.id primary _citation.title 'The Structure of E. Coli Exoix - Implications for DNA Binding and Catalysis in Flap Endonucleases' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 8357 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23821668 _citation.pdbx_database_id_DOI 10.1093/NAR/GKT591 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Anstey-Gilbert, C.S.' 1 ? primary 'Hemsworth, G.R.' 2 ? primary 'Flemming, C.S.' 3 ? primary 'Hodskinson, M.R.G.' 4 ? primary 'Zhang, J.' 5 ? primary 'Sedelnikova, S.E.' 6 ? primary 'Stillman, T.J.' 7 ? primary 'Sayers, J.R.' 8 ? primary 'Artymiuk, P.J.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN XNI' 28203.158 1 3.1.-.- ? ? ? 2 polymer syn ;5OV4 DNA, 5'-D(*AP*AP*AP*AP*GP*CP*GP*TP*AP*CP*GP*CP)-3' ; 3680.432 1 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 5 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 6 water nat water 18.015 159 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name EXOIX # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDE MPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI DGNLQQLRLVR ; ;MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDE MPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI DGNLQQLRLVR ; A ? 2 polydeoxyribonucleotide no no '(DA)(DA)(DA)(DA)(DG)(DC)(DG)(DT)(DA)(DC)(DG)(DC)' AAAAGCGTACGC X ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'POTASSIUM ION' K 4 'CALCIUM ION' CA 5 'ACETATE ION' ACT 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 VAL n 1 4 HIS n 1 5 LEU n 1 6 LEU n 1 7 ILE n 1 8 VAL n 1 9 ASP n 1 10 ALA n 1 11 LEU n 1 12 ASN n 1 13 LEU n 1 14 ILE n 1 15 ARG n 1 16 ARG n 1 17 ILE n 1 18 HIS n 1 19 ALA n 1 20 VAL n 1 21 GLN n 1 22 GLY n 1 23 SER n 1 24 PRO n 1 25 CYS n 1 26 VAL n 1 27 GLU n 1 28 THR n 1 29 CYS n 1 30 GLN n 1 31 HIS n 1 32 ALA n 1 33 LEU n 1 34 ASP n 1 35 GLN n 1 36 LEU n 1 37 ILE n 1 38 MET n 1 39 HIS n 1 40 SER n 1 41 GLN n 1 42 PRO n 1 43 THR n 1 44 HIS n 1 45 ALA n 1 46 VAL n 1 47 ALA n 1 48 VAL n 1 49 PHE n 1 50 ASP n 1 51 ASP n 1 52 GLU n 1 53 ASN n 1 54 ARG n 1 55 SER n 1 56 SER n 1 57 GLY n 1 58 TRP n 1 59 ARG n 1 60 HIS n 1 61 GLN n 1 62 ARG n 1 63 LEU n 1 64 PRO n 1 65 ASP n 1 66 TYR n 1 67 LYS n 1 68 ALA n 1 69 GLY n 1 70 ARG n 1 71 PRO n 1 72 PRO n 1 73 MET n 1 74 PRO n 1 75 GLU n 1 76 GLU n 1 77 LEU n 1 78 HIS n 1 79 ASP n 1 80 GLU n 1 81 MET n 1 82 PRO n 1 83 ALA n 1 84 LEU n 1 85 ARG n 1 86 ALA n 1 87 ALA n 1 88 PHE n 1 89 GLU n 1 90 GLN n 1 91 ARG n 1 92 GLY n 1 93 VAL n 1 94 PRO n 1 95 CYS n 1 96 TRP n 1 97 SER n 1 98 THR n 1 99 SER n 1 100 GLY n 1 101 ASN n 1 102 GLU n 1 103 ALA n 1 104 ASP n 1 105 ASP n 1 106 LEU n 1 107 ALA n 1 108 ALA n 1 109 THR n 1 110 LEU n 1 111 ALA n 1 112 VAL n 1 113 LYS n 1 114 VAL n 1 115 THR n 1 116 GLN n 1 117 ALA n 1 118 GLY n 1 119 HIS n 1 120 GLN n 1 121 ALA n 1 122 THR n 1 123 ILE n 1 124 VAL n 1 125 SER n 1 126 THR n 1 127 ASP n 1 128 LYS n 1 129 GLY n 1 130 TYR n 1 131 CYS n 1 132 GLN n 1 133 LEU n 1 134 LEU n 1 135 SER n 1 136 PRO n 1 137 THR n 1 138 LEU n 1 139 ARG n 1 140 ILE n 1 141 ARG n 1 142 ASP n 1 143 TYR n 1 144 PHE n 1 145 GLN n 1 146 LYS n 1 147 ARG n 1 148 TRP n 1 149 LEU n 1 150 ASP n 1 151 ALA n 1 152 PRO n 1 153 PHE n 1 154 ILE n 1 155 ASP n 1 156 LYS n 1 157 GLU n 1 158 PHE n 1 159 GLY n 1 160 VAL n 1 161 GLN n 1 162 PRO n 1 163 GLN n 1 164 GLN n 1 165 LEU n 1 166 PRO n 1 167 ASP n 1 168 TYR n 1 169 TRP n 1 170 GLY n 1 171 LEU n 1 172 ALA n 1 173 GLY n 1 174 ILE n 1 175 SER n 1 176 SER n 1 177 SER n 1 178 LYS n 1 179 VAL n 1 180 PRO n 1 181 GLY n 1 182 VAL n 1 183 ALA n 1 184 GLY n 1 185 ILE n 1 186 GLY n 1 187 PRO n 1 188 LYS n 1 189 SER n 1 190 ALA n 1 191 THR n 1 192 GLN n 1 193 LEU n 1 194 LEU n 1 195 VAL n 1 196 GLU n 1 197 PHE n 1 198 GLN n 1 199 SER n 1 200 LEU n 1 201 GLU n 1 202 GLY n 1 203 ILE n 1 204 TYR n 1 205 GLU n 1 206 ASN n 1 207 LEU n 1 208 ASP n 1 209 ALA n 1 210 VAL n 1 211 ALA n 1 212 GLU n 1 213 LYS n 1 214 TRP n 1 215 ARG n 1 216 LYS n 1 217 LYS n 1 218 LEU n 1 219 GLU n 1 220 THR n 1 221 HIS n 1 222 LYS n 1 223 GLU n 1 224 MET n 1 225 ALA n 1 226 PHE n 1 227 LEU n 1 228 CYS n 1 229 ARG n 1 230 ASP n 1 231 ILE n 1 232 ALA n 1 233 ARG n 1 234 LEU n 1 235 GLN n 1 236 THR n 1 237 ASP n 1 238 LEU n 1 239 HIS n 1 240 ILE n 1 241 ASP n 1 242 GLY n 1 243 ASN n 1 244 LEU n 1 245 GLN n 1 246 GLN n 1 247 LEU n 1 248 ARG n 1 249 LEU n 1 250 VAL n 1 251 ARG n 2 1 DA n 2 2 DA n 2 3 DA n 2 4 DA n 2 5 DG n 2 6 DC n 2 7 DG n 2 8 DT n 2 9 DA n 2 10 DC n 2 11 DG n 2 12 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'XL1 BLUE' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PCI857 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PJONEX _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'SYNTHETIC CONSTRUCT' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 HIS 4 4 4 HIS HIS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 CYS 25 25 25 CYS CYS A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 MET 38 38 38 MET MET A . n A 1 39 HIS 39 39 39 HIS HIS A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 ASN 53 53 ? ? ? A . n A 1 54 ARG 54 54 ? ? ? A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 HIS 60 60 60 HIS HIS A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 MET 81 81 81 MET MET A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 GLN 116 116 116 GLN GLN A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 LYS 128 128 128 LYS LYS A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 TYR 130 130 130 TYR TYR A . n A 1 131 CYS 131 131 131 CYS CYS A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 SER 135 135 135 SER SER A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 TRP 148 148 148 TRP TRP A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 ILE 154 154 154 ILE ILE A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 LYS 156 156 156 LYS LYS A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 PRO 162 162 162 PRO PRO A . n A 1 163 GLN 163 163 163 GLN GLN A . n A 1 164 GLN 164 164 164 GLN GLN A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 PRO 166 166 166 PRO PRO A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 TYR 168 168 168 TYR TYR A . n A 1 169 TRP 169 169 169 TRP TRP A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 PRO 180 180 180 PRO PRO A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 PRO 187 187 187 PRO PRO A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 SER 189 189 189 SER SER A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 GLN 192 192 192 GLN GLN A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 GLN 198 198 198 GLN GLN A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 TYR 204 204 204 TYR TYR A . n A 1 205 GLU 205 205 205 GLU GLU A . n A 1 206 ASN 206 206 206 ASN ASN A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 ALA 209 209 209 ALA ALA A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 ALA 211 211 211 ALA ALA A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 TRP 214 214 214 TRP TRP A . n A 1 215 ARG 215 215 215 ARG ARG A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 LYS 217 217 217 LYS LYS A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLU 219 219 219 GLU GLU A . n A 1 220 THR 220 220 220 THR THR A . n A 1 221 HIS 221 221 221 HIS HIS A . n A 1 222 LYS 222 222 222 LYS LYS A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 MET 224 224 224 MET MET A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 PHE 226 226 226 PHE PHE A . n A 1 227 LEU 227 227 227 LEU LEU A . n A 1 228 CYS 228 228 228 CYS CYS A . n A 1 229 ARG 229 229 229 ARG ARG A . n A 1 230 ASP 230 230 230 ASP ASP A . n A 1 231 ILE 231 231 231 ILE ILE A . n A 1 232 ALA 232 232 232 ALA ALA A . n A 1 233 ARG 233 233 233 ARG ARG A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 GLN 235 235 235 GLN GLN A . n A 1 236 THR 236 236 236 THR THR A . n A 1 237 ASP 237 237 237 ASP ASP A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 HIS 239 239 239 HIS HIS A . n A 1 240 ILE 240 240 240 ILE ILE A . n A 1 241 ASP 241 241 241 ASP ASP A . n A 1 242 GLY 242 242 242 GLY GLY A . n A 1 243 ASN 243 243 243 ASN ASN A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 GLN 245 245 245 GLN GLN A . n A 1 246 GLN 246 246 246 GLN GLN A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 ARG 248 248 248 ARG ARG A . n A 1 249 LEU 249 249 249 LEU LEU A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 ARG 251 251 ? ? ? A . n B 2 1 DA 1 1 1 DA DA X . n B 2 2 DA 2 2 2 DA DA X . n B 2 3 DA 3 3 3 DA DA X . n B 2 4 DA 4 4 4 DA DA X . n B 2 5 DG 5 5 5 DG DG X . n B 2 6 DC 6 6 6 DC DC X . n B 2 7 DG 7 7 7 DG DG X . n B 2 8 DT 8 8 8 DT DT X . n B 2 9 DA 9 9 9 DA DA X . n B 2 10 DC 10 10 10 DC DC X . n B 2 11 DG 11 11 11 DG DG X . n B 2 12 DC 12 12 12 DC DC X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 K 1 1251 1251 K K A . D 4 CA 1 1252 1252 CA CA A . E 4 CA 1 1253 1253 CA CA A . F 5 ACT 1 1254 1254 ACT ACT A . G 5 ACT 1 1255 1255 ACT ACT A . H 6 HOH 1 2001 2001 HOH HOH A . H 6 HOH 2 2002 2002 HOH HOH A . H 6 HOH 3 2003 2003 HOH HOH A . H 6 HOH 4 2004 2004 HOH HOH A . H 6 HOH 5 2005 2005 HOH HOH A . H 6 HOH 6 2006 2006 HOH HOH A . H 6 HOH 7 2007 2007 HOH HOH A . H 6 HOH 8 2008 2008 HOH HOH A . H 6 HOH 9 2009 2009 HOH HOH A . H 6 HOH 10 2010 2010 HOH HOH A . H 6 HOH 11 2011 2011 HOH HOH A . H 6 HOH 12 2012 2012 HOH HOH A . H 6 HOH 13 2013 2013 HOH HOH A . H 6 HOH 14 2014 2014 HOH HOH A . H 6 HOH 15 2015 2015 HOH HOH A . H 6 HOH 16 2016 2016 HOH HOH A . H 6 HOH 17 2017 2017 HOH HOH A . H 6 HOH 18 2018 2018 HOH HOH A . H 6 HOH 19 2019 2019 HOH HOH A . H 6 HOH 20 2020 2020 HOH HOH A . H 6 HOH 21 2021 2021 HOH HOH A . H 6 HOH 22 2022 2022 HOH HOH A . H 6 HOH 23 2023 2023 HOH HOH A . H 6 HOH 24 2024 2024 HOH HOH A . H 6 HOH 25 2025 2025 HOH HOH A . H 6 HOH 26 2026 2026 HOH HOH A . H 6 HOH 27 2027 2027 HOH HOH A . H 6 HOH 28 2028 2028 HOH HOH A . H 6 HOH 29 2029 2029 HOH HOH A . H 6 HOH 30 2030 2030 HOH HOH A . H 6 HOH 31 2031 2031 HOH HOH A . H 6 HOH 32 2032 2032 HOH HOH A . H 6 HOH 33 2033 2033 HOH HOH A . H 6 HOH 34 2034 2034 HOH HOH A . H 6 HOH 35 2035 2035 HOH HOH A . H 6 HOH 36 2036 2036 HOH HOH A . H 6 HOH 37 2037 2037 HOH HOH A . H 6 HOH 38 2038 2038 HOH HOH A . H 6 HOH 39 2039 2039 HOH HOH A . H 6 HOH 40 2040 2040 HOH HOH A . H 6 HOH 41 2041 2041 HOH HOH A . H 6 HOH 42 2042 2042 HOH HOH A . H 6 HOH 43 2043 2043 HOH HOH A . H 6 HOH 44 2044 2044 HOH HOH A . H 6 HOH 45 2045 2045 HOH HOH A . H 6 HOH 46 2046 2046 HOH HOH A . H 6 HOH 47 2047 2047 HOH HOH A . H 6 HOH 48 2048 2048 HOH HOH A . H 6 HOH 49 2049 2049 HOH HOH A . H 6 HOH 50 2050 2050 HOH HOH A . H 6 HOH 51 2051 2051 HOH HOH A . H 6 HOH 52 2052 2052 HOH HOH A . H 6 HOH 53 2053 2053 HOH HOH A . H 6 HOH 54 2054 2054 HOH HOH A . H 6 HOH 55 2055 2055 HOH HOH A . H 6 HOH 56 2056 2056 HOH HOH A . H 6 HOH 57 2057 2057 HOH HOH A . H 6 HOH 58 2058 2058 HOH HOH A . H 6 HOH 59 2059 2059 HOH HOH A . H 6 HOH 60 2060 2060 HOH HOH A . H 6 HOH 61 2061 2061 HOH HOH A . H 6 HOH 62 2062 2062 HOH HOH A . H 6 HOH 63 2063 2063 HOH HOH A . H 6 HOH 64 2064 2064 HOH HOH A . H 6 HOH 65 2065 2065 HOH HOH A . H 6 HOH 66 2066 2066 HOH HOH A . H 6 HOH 67 2067 2067 HOH HOH A . H 6 HOH 68 2068 2068 HOH HOH A . H 6 HOH 69 2069 2069 HOH HOH A . H 6 HOH 70 2070 2070 HOH HOH A . H 6 HOH 71 2071 2071 HOH HOH A . H 6 HOH 72 2072 2072 HOH HOH A . H 6 HOH 73 2073 2073 HOH HOH A . H 6 HOH 74 2074 2074 HOH HOH A . H 6 HOH 75 2075 2075 HOH HOH A . H 6 HOH 76 2076 2076 HOH HOH A . H 6 HOH 77 2077 2077 HOH HOH A . H 6 HOH 78 2078 2078 HOH HOH A . H 6 HOH 79 2079 2079 HOH HOH A . H 6 HOH 80 2080 2080 HOH HOH A . H 6 HOH 81 2081 2081 HOH HOH A . H 6 HOH 82 2082 2082 HOH HOH A . H 6 HOH 83 2083 2083 HOH HOH A . H 6 HOH 84 2084 2084 HOH HOH A . H 6 HOH 85 2085 2085 HOH HOH A . H 6 HOH 86 2086 2086 HOH HOH A . H 6 HOH 87 2087 2087 HOH HOH A . H 6 HOH 88 2088 2088 HOH HOH A . H 6 HOH 89 2089 2089 HOH HOH A . H 6 HOH 90 2090 2090 HOH HOH A . H 6 HOH 91 2091 2091 HOH HOH A . H 6 HOH 92 2092 2092 HOH HOH A . H 6 HOH 93 2093 2093 HOH HOH A . H 6 HOH 94 2094 2094 HOH HOH A . H 6 HOH 95 2095 2095 HOH HOH A . H 6 HOH 96 2096 2096 HOH HOH A . H 6 HOH 97 2097 2097 HOH HOH A . H 6 HOH 98 2098 2098 HOH HOH A . H 6 HOH 99 2099 2099 HOH HOH A . H 6 HOH 100 2100 2100 HOH HOH A . H 6 HOH 101 2101 2101 HOH HOH A . H 6 HOH 102 2102 2102 HOH HOH A . H 6 HOH 103 2103 2103 HOH HOH A . H 6 HOH 104 2104 2104 HOH HOH A . H 6 HOH 105 2105 2105 HOH HOH A . H 6 HOH 106 2106 2106 HOH HOH A . H 6 HOH 107 2107 2107 HOH HOH A . H 6 HOH 108 2108 2108 HOH HOH A . H 6 HOH 109 2109 2109 HOH HOH A . H 6 HOH 110 2110 2110 HOH HOH A . H 6 HOH 111 2111 2111 HOH HOH A . H 6 HOH 112 2112 2112 HOH HOH A . H 6 HOH 113 2113 2113 HOH HOH A . H 6 HOH 114 2114 2114 HOH HOH A . H 6 HOH 115 2115 2115 HOH HOH A . H 6 HOH 116 2116 2116 HOH HOH A . H 6 HOH 117 2117 2117 HOH HOH A . H 6 HOH 118 2118 2118 HOH HOH A . H 6 HOH 119 2119 2119 HOH HOH A . H 6 HOH 120 2120 2120 HOH HOH A . H 6 HOH 121 2121 2121 HOH HOH A . H 6 HOH 122 2122 2122 HOH HOH A . H 6 HOH 123 2123 2123 HOH HOH A . H 6 HOH 124 2124 2124 HOH HOH A . H 6 HOH 125 2125 2125 HOH HOH A . H 6 HOH 126 2126 2126 HOH HOH A . H 6 HOH 127 2127 2127 HOH HOH A . H 6 HOH 128 2128 2128 HOH HOH A . H 6 HOH 129 2129 2129 HOH HOH A . H 6 HOH 130 2130 2130 HOH HOH A . H 6 HOH 131 2131 2131 HOH HOH A . H 6 HOH 132 2132 2132 HOH HOH A . H 6 HOH 133 2133 2133 HOH HOH A . H 6 HOH 134 2134 2134 HOH HOH A . H 6 HOH 135 2135 2135 HOH HOH A . H 6 HOH 136 2136 2136 HOH HOH A . H 6 HOH 137 2137 2137 HOH HOH A . H 6 HOH 138 2138 2138 HOH HOH A . H 6 HOH 139 2139 2139 HOH HOH A . H 6 HOH 140 2140 2140 HOH HOH A . H 6 HOH 141 2141 2141 HOH HOH A . H 6 HOH 142 2142 2142 HOH HOH A . H 6 HOH 143 2143 2143 HOH HOH A . H 6 HOH 144 2144 2144 HOH HOH A . H 6 HOH 145 2145 2145 HOH HOH A . H 6 HOH 146 2146 2146 HOH HOH A . H 6 HOH 147 2147 2147 HOH HOH A . H 6 HOH 148 2148 2148 HOH HOH A . H 6 HOH 149 2149 2149 HOH HOH A . H 6 HOH 150 2150 2150 HOH HOH A . I 6 HOH 1 2001 2001 HOH HOH X . I 6 HOH 2 2002 2002 HOH HOH X . I 6 HOH 3 2003 2003 HOH HOH X . I 6 HOH 4 2004 2004 HOH HOH X . I 6 HOH 5 2005 2005 HOH HOH X . I 6 HOH 6 2006 2006 HOH HOH X . I 6 HOH 7 2007 2007 HOH HOH X . I 6 HOH 8 2008 2008 HOH HOH X . I 6 HOH 9 2009 2009 HOH HOH X . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 51 ? CG ? A ASP 51 CG 2 1 Y 1 A ASP 51 ? OD1 ? A ASP 51 OD1 3 1 Y 1 A ASP 51 ? OD2 ? A ASP 51 OD2 4 1 Y 1 A GLU 52 ? CG ? A GLU 52 CG 5 1 Y 1 A GLU 52 ? CD ? A GLU 52 CD 6 1 Y 1 A GLU 52 ? OE1 ? A GLU 52 OE1 7 1 Y 1 A GLU 52 ? OE2 ? A GLU 52 OE2 8 1 Y 1 A SER 55 ? OG ? A SER 55 OG 9 1 Y 1 A GLU 75 ? CG ? A GLU 75 CG 10 1 Y 1 A GLU 75 ? CD ? A GLU 75 CD 11 1 Y 1 A GLU 75 ? OE1 ? A GLU 75 OE1 12 1 Y 1 A GLU 75 ? OE2 ? A GLU 75 OE2 13 1 Y 1 A SER 99 ? OG ? A SER 99 OG 14 1 Y 1 A LYS 156 ? CG ? A LYS 156 CG 15 1 Y 1 A LYS 156 ? CD ? A LYS 156 CD 16 1 Y 1 A LYS 156 ? CE ? A LYS 156 CE 17 1 Y 1 A LYS 156 ? NZ ? A LYS 156 NZ 18 1 Y 1 A GLN 198 ? CG ? A GLN 198 CG 19 1 Y 1 A GLN 198 ? CD ? A GLN 198 CD 20 1 Y 1 A GLN 198 ? OE1 ? A GLN 198 OE1 21 1 Y 1 A GLN 198 ? NE2 ? A GLN 198 NE2 22 1 Y 1 A ASP 208 ? CG ? A ASP 208 CG 23 1 Y 1 A ASP 208 ? OD1 ? A ASP 208 OD1 24 1 Y 1 A ASP 208 ? OD2 ? A ASP 208 OD2 25 1 Y 1 A GLU 212 ? CG ? A GLU 212 CG 26 1 Y 1 A GLU 212 ? CD ? A GLU 212 CD 27 1 Y 1 A GLU 212 ? OE1 ? A GLU 212 OE1 28 1 Y 1 A GLU 212 ? OE2 ? A GLU 212 OE2 29 1 Y 1 A ARG 215 ? CG ? A ARG 215 CG 30 1 Y 1 A ARG 215 ? CD ? A ARG 215 CD 31 1 Y 1 A ARG 215 ? NE ? A ARG 215 NE 32 1 Y 1 A ARG 215 ? CZ ? A ARG 215 CZ 33 1 Y 1 A ARG 215 ? NH1 ? A ARG 215 NH1 34 1 Y 1 A ARG 215 ? NH2 ? A ARG 215 NH2 35 1 Y 1 A LYS 216 ? CG ? A LYS 216 CG 36 1 Y 1 A LYS 216 ? CD ? A LYS 216 CD 37 1 Y 1 A LYS 216 ? CE ? A LYS 216 CE 38 1 Y 1 A LYS 216 ? NZ ? A LYS 216 NZ 39 1 Y 1 A GLU 219 ? CG ? A GLU 219 CG 40 1 Y 1 A GLU 219 ? CD ? A GLU 219 CD 41 1 Y 1 A GLU 219 ? OE1 ? A GLU 219 OE1 42 1 Y 1 A GLU 219 ? OE2 ? A GLU 219 OE2 43 1 Y 1 A GLN 245 ? CG ? A GLN 245 CG 44 1 Y 1 A GLN 245 ? CD ? A GLN 245 CD 45 1 Y 1 A GLN 245 ? OE1 ? A GLN 245 OE1 46 1 Y 1 A GLN 245 ? NE2 ? A GLN 245 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0070 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 # _cell.entry_id 3ZDC _cell.length_a 66.178 _cell.length_b 152.688 _cell.length_c 34.530 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZDC _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # _exptl.entry_id 3ZDC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_percent_sol 60 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M CALCIUM ACETATE, 15% (W/V) PEG-3350, pH 6.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-03-04 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_wavelength 0.980 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3ZDC _reflns.observed_criterion_sigma_I 6.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.00 _reflns.d_resolution_high 1.53 _reflns.number_obs 53386 _reflns.number_all ? _reflns.percent_possible_obs 97.9 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.53 _reflns_shell.d_res_low 1.61 _reflns_shell.percent_possible_all 97.9 _reflns_shell.Rmerge_I_obs 0.42 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.20 _reflns_shell.pdbx_redundancy 3.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ZDC _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 50688 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.53 _refine.ls_d_res_high 1.53 _refine.ls_percent_reflns_obs 99.20 _refine.ls_R_factor_obs 0.20603 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20485 _refine.ls_R_factor_R_free 0.22865 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2697 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.B_iso_mean 24.240 _refine.aniso_B[1][1] -0.64 _refine.aniso_B[2][2] 0.47 _refine.aniso_B[3][3] 0.17 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY' _refine.pdbx_starting_model 'EXOIX FLAP1 FRAGMENT COMPLEX STRUCTURE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.076 _refine.pdbx_overall_ESU_R_Free 0.076 _refine.overall_SU_ML 0.049 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.321 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1897 _refine_hist.pdbx_number_atoms_nucleic_acid 245 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 159 _refine_hist.number_atoms_total 2312 _refine_hist.d_res_high 1.53 _refine_hist.d_res_low 34.53 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.021 ? 2228 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1400 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.429 2.098 ? 3082 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.931 3.000 ? 3428 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.531 5.000 ? 247 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.585 23.765 ? 85 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.732 15.000 ? 309 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.039 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.086 0.200 ? 348 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 2316 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 408 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 9.593 1.500 ? 1241 'X-RAY DIFFRACTION' ? r_mcbond_other 1.019 1.500 ? 495 'X-RAY DIFFRACTION' ? r_mcangle_it 11.026 2.000 ? 1980 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 16.671 3.000 ? 987 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 17.688 4.500 ? 1101 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.532 _refine_ls_shell.d_res_low 1.572 _refine_ls_shell.number_reflns_R_work 3624 _refine_ls_shell.R_factor_R_work 0.310 _refine_ls_shell.percent_reflns_obs 96.66 _refine_ls_shell.R_factor_R_free 0.322 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 191 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 3ZDC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3ZDC _struct.title 'Structure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, potassium and calcium' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZDC _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, EXOIX, FLAP ENDONUCLEASE, DNA BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP XNI_ECO57 1 ? ? Q8X6R9 ? 2 PDB 3ZDC 2 ? ? 3ZDC ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3ZDC A 1 ? 251 ? Q8X6R9 1 ? 251 ? 1 251 2 2 3ZDC X 1 ? 12 ? 3ZDC 1 ? 12 ? 1 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1450 ? 1 MORE -31.5 ? 1 'SSA (A^2)' 14230 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 10 ? GLY A 22 ? ALA A 10 GLY A 22 1 ? 13 HELX_P HELX_P2 2 CYS A 25 ? GLN A 41 ? CYS A 25 GLN A 41 1 ? 17 HELX_P HELX_P3 3 GLY A 57 ? LEU A 63 ? GLY A 57 LEU A 63 1 ? 7 HELX_P HELX_P4 4 PRO A 74 ? GLY A 92 ? PRO A 74 GLY A 92 1 ? 19 HELX_P HELX_P5 5 GLU A 102 ? ALA A 117 ? GLU A 102 ALA A 117 1 ? 16 HELX_P HELX_P6 6 ASP A 127 ? LEU A 134 ? ASP A 127 LEU A 134 5 ? 8 HELX_P HELX_P7 7 ASP A 150 ? GLY A 159 ? ASP A 150 GLY A 159 1 ? 10 HELX_P HELX_P8 8 GLN A 161 ? GLN A 163 ? GLN A 161 GLN A 163 5 ? 3 HELX_P HELX_P9 9 GLN A 164 ? GLY A 173 ? GLN A 164 GLY A 173 1 ? 10 HELX_P HELX_P10 10 SER A 175 ? LYS A 178 ? SER A 175 LYS A 178 5 ? 4 HELX_P HELX_P11 11 GLY A 186 ? PHE A 197 ? GLY A 186 PHE A 197 1 ? 12 HELX_P HELX_P12 12 SER A 199 ? ASN A 206 ? SER A 199 ASN A 206 1 ? 8 HELX_P HELX_P13 13 LEU A 207 ? VAL A 210 ? LEU A 207 VAL A 210 5 ? 4 HELX_P HELX_P14 14 ALA A 211 ? HIS A 221 ? ALA A 211 HIS A 221 1 ? 11 HELX_P HELX_P15 15 HIS A 221 ? ARG A 233 ? HIS A 221 ARG A 233 1 ? 13 HELX_P HELX_P16 16 ASN A 243 ? LEU A 247 ? ASN A 243 LEU A 247 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 127 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 127 A CA 1252 1_555 ? ? ? ? ? ? ? 2.399 ? ? metalc2 metalc ? ? A ASP 127 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 127 A CA 1252 1_555 ? ? ? ? ? ? ? 2.425 ? ? metalc3 metalc ? ? A LEU 171 O ? ? ? 1_555 C K . K ? ? A LEU 171 A K 1251 1_555 ? ? ? ? ? ? ? 3.449 ? ? metalc4 metalc ? ? A ALA 172 O ? ? ? 1_555 C K . K ? ? A ALA 172 A K 1251 1_555 ? ? ? ? ? ? ? 2.827 ? ? metalc5 metalc ? ? A ALA 172 O ? ? ? 1_555 E CA . CA ? ? A ALA 172 A CA 1253 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc6 metalc ? ? A PRO 180 O ? ? ? 1_555 C K . K ? ? A PRO 180 A K 1251 1_555 ? ? ? ? ? ? ? 2.992 ? ? metalc7 metalc ? ? A VAL 182 O ? ? ? 1_555 C K . K ? ? A VAL 182 A K 1251 1_555 ? ? ? ? ? ? ? 2.890 ? ? metalc8 metalc ? ? A ILE 185 O ? ? ? 1_555 C K . K ? ? A ILE 185 A K 1251 1_555 ? ? ? ? ? ? ? 2.668 ? ? metalc9 metalc ? ? A ILE 185 O ? ? ? 1_555 E CA . CA ? ? A ILE 185 A CA 1253 1_555 ? ? ? ? ? ? ? 2.581 ? ? metalc10 metalc ? ? C K . K ? ? ? 1_555 E CA . CA ? ? A K 1251 A CA 1253 1_555 ? ? ? ? ? ? ? 1.930 ? ? metalc11 metalc ? ? C K . K ? ? ? 1_555 H HOH . O ? ? A K 1251 A HOH 2121 1_555 ? ? ? ? ? ? ? 3.280 ? ? metalc12 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1252 A HOH 2058 1_555 ? ? ? ? ? ? ? 2.894 ? ? metalc13 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1252 A HOH 2094 1_555 ? ? ? ? ? ? ? 2.384 ? ? metalc14 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1252 A HOH 2095 1_555 ? ? ? ? ? ? ? 2.560 ? ? metalc15 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1252 A HOH 2125 1_555 ? ? ? ? ? ? ? 2.670 ? ? metalc16 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1253 A HOH 2121 1_555 ? ? ? ? ? ? ? 2.293 ? ? metalc17 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1253 A HOH 2123 1_555 ? ? ? ? ? ? ? 2.312 ? ? metalc18 metalc ? ? E CA . CA ? ? ? 1_555 B DC 10 OP2 ? ? A CA 1253 X DC 10 1_555 ? ? ? ? ? ? ? 2.131 ? ? hydrog1 hydrog ? ? B DG 5 N1 ? ? ? 1_555 B DC 12 N3 ? ? X DG 5 X DC 12 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 5 N2 ? ? ? 1_555 B DC 12 O2 ? ? X DG 5 X DC 12 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 5 O6 ? ? ? 1_555 B DC 12 N4 ? ? X DG 5 X DC 12 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 6 N3 ? ? ? 1_555 B DG 11 N1 ? ? X DC 6 X DG 11 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 6 N4 ? ? ? 1_555 B DG 11 O6 ? ? X DC 6 X DG 11 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 6 O2 ? ? ? 1_555 B DG 11 N2 ? ? X DC 6 X DG 11 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 7 N1 ? ? ? 1_555 B DC 10 N3 ? ? X DG 7 X DC 10 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 7 N2 ? ? ? 1_555 B DC 10 O2 ? ? X DG 7 X DC 10 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 7 O6 ? ? ? 1_555 B DC 10 N4 ? ? X DG 7 X DC 10 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 8 N3 ? ? ? 1_555 B DA 9 N1 ? ? X DT 8 X DA 9 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 8 O4 ? ? ? 1_555 B DA 9 N6 ? ? X DT 8 X DA 9 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 9 N1 ? ? ? 1_555 B DT 8 N3 ? ? X DA 9 X DT 8 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 9 N6 ? ? ? 1_555 B DT 8 O4 ? ? X DA 9 X DT 8 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 10 N3 ? ? ? 1_555 B DG 7 N1 ? ? X DC 10 X DG 7 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 10 N4 ? ? ? 1_555 B DG 7 O6 ? ? X DC 10 X DG 7 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 10 O2 ? ? ? 1_555 B DG 7 N2 ? ? X DC 10 X DG 7 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 11 N1 ? ? ? 1_555 B DC 6 N3 ? ? X DG 11 X DC 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 11 N2 ? ? ? 1_555 B DC 6 O2 ? ? X DG 11 X DC 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 11 O6 ? ? ? 1_555 B DC 6 N4 ? ? X DG 11 X DC 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 12 N3 ? ? ? 1_555 B DG 5 N1 ? ? X DC 12 X DG 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 12 N4 ? ? ? 1_555 B DG 5 O6 ? ? X DC 12 X DG 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 12 O2 ? ? ? 1_555 B DG 5 N2 ? ? X DC 12 X DG 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 127 ? A ASP 127 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 OD2 ? A ASP 127 ? A ASP 127 ? 1_555 53.2 ? 2 OD1 ? A ASP 127 ? A ASP 127 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2058 ? 1_555 118.7 ? 3 OD2 ? A ASP 127 ? A ASP 127 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2058 ? 1_555 70.1 ? 4 OD1 ? A ASP 127 ? A ASP 127 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2094 ? 1_555 78.9 ? 5 OD2 ? A ASP 127 ? A ASP 127 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2094 ? 1_555 124.1 ? 6 O ? H HOH . ? A HOH 2058 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2094 ? 1_555 162.0 ? 7 OD1 ? A ASP 127 ? A ASP 127 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2095 ? 1_555 85.9 ? 8 OD2 ? A ASP 127 ? A ASP 127 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2095 ? 1_555 84.9 ? 9 O ? H HOH . ? A HOH 2058 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2095 ? 1_555 66.3 ? 10 O ? H HOH . ? A HOH 2094 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2095 ? 1_555 122.2 ? 11 OD1 ? A ASP 127 ? A ASP 127 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2125 ? 1_555 159.2 ? 12 OD2 ? A ASP 127 ? A ASP 127 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2125 ? 1_555 139.4 ? 13 O ? H HOH . ? A HOH 2058 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2125 ? 1_555 81.1 ? 14 O ? H HOH . ? A HOH 2094 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2125 ? 1_555 81.0 ? 15 O ? H HOH . ? A HOH 2095 ? 1_555 CA ? D CA . ? A CA 1252 ? 1_555 O ? H HOH . ? A HOH 2125 ? 1_555 109.5 ? 16 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A ALA 172 ? A ALA 172 ? 1_555 77.1 ? 17 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A PRO 180 ? A PRO 180 ? 1_555 93.4 ? 18 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A PRO 180 ? A PRO 180 ? 1_555 90.2 ? 19 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A VAL 182 ? A VAL 182 ? 1_555 70.3 ? 20 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A VAL 182 ? A VAL 182 ? 1_555 146.5 ? 21 O ? A PRO 180 ? A PRO 180 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A VAL 182 ? A VAL 182 ? 1_555 98.7 ? 22 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A ILE 185 ? A ILE 185 ? 1_555 76.2 ? 23 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A ILE 185 ? A ILE 185 ? 1_555 83.0 ? 24 O ? A PRO 180 ? A PRO 180 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A ILE 185 ? A ILE 185 ? 1_555 168.6 ? 25 O ? A VAL 182 ? A VAL 182 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? A ILE 185 ? A ILE 185 ? 1_555 82.3 ? 26 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? C K . ? A K 1251 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 120.9 ? 27 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? C K . ? A K 1251 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 55.4 ? 28 O ? A PRO 180 ? A PRO 180 ? 1_555 K ? C K . ? A K 1251 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 117.2 ? 29 O ? A VAL 182 ? A VAL 182 ? 1_555 K ? C K . ? A K 1251 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 140.0 ? 30 O ? A ILE 185 ? A ILE 185 ? 1_555 K ? C K . ? A K 1251 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 66.1 ? 31 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2121 ? 1_555 137.0 ? 32 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2121 ? 1_555 61.9 ? 33 O ? A PRO 180 ? A PRO 180 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2121 ? 1_555 75.2 ? 34 O ? A VAL 182 ? A VAL 182 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2121 ? 1_555 151.5 ? 35 O ? A ILE 185 ? A ILE 185 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2121 ? 1_555 109.3 ? 36 CA ? E CA . ? A CA 1253 ? 1_555 K ? C K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2121 ? 1_555 43.2 ? 37 O ? A ALA 172 ? A ALA 172 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 O ? A ILE 185 ? A ILE 185 ? 1_555 95.1 ? 38 O ? A ALA 172 ? A ALA 172 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 O ? H HOH . ? A HOH 2121 ? 1_555 85.9 ? 39 O ? A ILE 185 ? A ILE 185 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 O ? H HOH . ? A HOH 2121 ? 1_555 172.0 ? 40 O ? A ALA 172 ? A ALA 172 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 O ? H HOH . ? A HOH 2123 ? 1_555 77.4 ? 41 O ? A ILE 185 ? A ILE 185 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 O ? H HOH . ? A HOH 2123 ? 1_555 97.4 ? 42 O ? H HOH . ? A HOH 2121 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 O ? H HOH . ? A HOH 2123 ? 1_555 90.6 ? 43 O ? A ALA 172 ? A ALA 172 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 OP2 ? B DC 10 ? X DC 10 ? 1_555 158.5 ? 44 O ? A ILE 185 ? A ILE 185 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 OP2 ? B DC 10 ? X DC 10 ? 1_555 89.2 ? 45 O ? H HOH . ? A HOH 2121 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 OP2 ? B DC 10 ? X DC 10 ? 1_555 92.7 ? 46 O ? H HOH . ? A HOH 2123 ? 1_555 CA ? E CA . ? A CA 1253 ? 1_555 OP2 ? B DC 10 ? X DC 10 ? 1_555 81.1 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 23 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 23 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 24 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 24 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.80 # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AA 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 CYS A 95 ? THR A 98 ? CYS A 95 THR A 98 AA 2 HIS A 44 ? ASP A 50 ? HIS A 44 ASP A 50 AA 3 HIS A 4 ? ASP A 9 ? HIS A 4 ASP A 9 AA 4 GLN A 120 ? VAL A 124 ? GLN A 120 VAL A 124 AA 5 LEU A 138 ? ASP A 142 ? LEU A 138 ASP A 142 AA 6 ARG A 147 ? TRP A 148 ? ARG A 147 TRP A 148 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N TRP A 96 ? N TRP A 96 O ALA A 47 ? O ALA A 47 AA 2 3 N HIS A 44 ? N HIS A 44 O HIS A 4 ? O HIS A 4 AA 3 4 N LEU A 5 ? N LEU A 5 O GLN A 120 ? O GLN A 120 AA 4 5 N ILE A 123 ? N ILE A 123 O ARG A 139 ? O ARG A 139 AA 5 6 N ASP A 142 ? N ASP A 142 O ARG A 147 ? O ARG A 147 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 1251 ? 7 'BINDING SITE FOR RESIDUE K A 1251' AC2 Software A CA 1252 ? 5 'BINDING SITE FOR RESIDUE CA A 1252' AC3 Software A CA 1253 ? 6 'BINDING SITE FOR RESIDUE CA A 1253' AC4 Software A ACT 1254 ? 6 'BINDING SITE FOR RESIDUE ACT A 1254' AC5 Software A ACT 1255 ? 3 'BINDING SITE FOR RESIDUE ACT A 1255' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 LEU A 171 ? LEU A 171 . ? 1_555 ? 2 AC1 7 ALA A 172 ? ALA A 172 . ? 1_555 ? 3 AC1 7 PRO A 180 ? PRO A 180 . ? 1_555 ? 4 AC1 7 VAL A 182 ? VAL A 182 . ? 1_555 ? 5 AC1 7 ILE A 185 ? ILE A 185 . ? 1_555 ? 6 AC1 7 CA E . ? CA A 1253 . ? 1_555 ? 7 AC1 7 DC B 10 ? DC X 10 . ? 1_555 ? 8 AC2 5 ASP A 127 ? ASP A 127 . ? 1_555 ? 9 AC2 5 HOH H . ? HOH A 2058 . ? 1_555 ? 10 AC2 5 HOH H . ? HOH A 2094 . ? 1_555 ? 11 AC2 5 HOH H . ? HOH A 2095 . ? 1_555 ? 12 AC2 5 HOH H . ? HOH A 2125 . ? 1_555 ? 13 AC3 6 ALA A 172 ? ALA A 172 . ? 1_555 ? 14 AC3 6 ILE A 185 ? ILE A 185 . ? 1_555 ? 15 AC3 6 K C . ? K A 1251 . ? 1_555 ? 16 AC3 6 HOH H . ? HOH A 2121 . ? 1_555 ? 17 AC3 6 HOH H . ? HOH A 2123 . ? 1_555 ? 18 AC3 6 DC B 10 ? DC X 10 . ? 1_555 ? 19 AC4 6 GLN A 35 ? GLN A 35 . ? 1_555 ? 20 AC4 6 LEU A 36 ? LEU A 36 . ? 1_555 ? 21 AC4 6 ARG A 141 ? ARG A 141 . ? 1_555 ? 22 AC4 6 LYS A 146 ? LYS A 146 . ? 1_555 ? 23 AC4 6 HOH H . ? HOH A 2028 . ? 1_555 ? 24 AC4 6 HOH H . ? HOH A 2149 . ? 1_555 ? 25 AC5 3 LEU A 110 ? LEU A 110 . ? 1_555 ? 26 AC5 3 LYS A 113 ? LYS A 113 . ? 1_555 ? 27 AC5 3 VAL A 114 ? VAL A 114 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LEU _pdbx_validate_close_contact.auth_seq_id_1 194 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 PHE _pdbx_validate_close_contact.auth_seq_id_2 197 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" X DA 2 ? ? "C1'" X DA 2 ? ? N9 X DA 2 ? ? 112.16 108.30 3.86 0.30 N 2 1 "C3'" X DA 2 ? ? "O3'" X DA 2 ? ? P X DA 3 ? ? 126.99 119.70 7.29 1.20 Y 3 1 "O4'" X DA 4 ? ? "C1'" X DA 4 ? ? N9 X DA 4 ? ? 110.82 108.30 2.52 0.30 N 4 1 "O4'" X DG 7 ? ? "C1'" X DG 7 ? ? N9 X DG 7 ? ? 111.46 108.30 3.16 0.30 N 5 1 "O4'" X DT 8 ? ? "C1'" X DT 8 ? ? N1 X DT 8 ? ? 111.39 108.30 3.09 0.30 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 206 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -117.85 _pdbx_validate_torsion.psi 59.35 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 100 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASN _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 101 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.32 # _pdbx_entry_details.entry_id 3ZDC _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;OLIGO DESIGNED BASED ON INITIAL STRUCTURE WITH FRAGMENT OF LARGER DNA ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ASN 53 ? A ASN 53 3 1 Y 1 A ARG 54 ? A ARG 54 4 1 Y 1 A ARG 251 ? A ARG 251 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CA CA CA N N 81 CYS N N N N 82 CYS CA C N R 83 CYS C C N N 84 CYS O O N N 85 CYS CB C N N 86 CYS SG S N N 87 CYS OXT O N N 88 CYS H H N N 89 CYS H2 H N N 90 CYS HA H N N 91 CYS HB2 H N N 92 CYS HB3 H N N 93 CYS HG H N N 94 CYS HXT H N N 95 DA OP3 O N N 96 DA P P N N 97 DA OP1 O N N 98 DA OP2 O N N 99 DA "O5'" O N N 100 DA "C5'" C N N 101 DA "C4'" C N R 102 DA "O4'" O N N 103 DA "C3'" C N S 104 DA "O3'" O N N 105 DA "C2'" C N N 106 DA "C1'" C N R 107 DA N9 N Y N 108 DA C8 C Y N 109 DA N7 N Y N 110 DA C5 C Y N 111 DA C6 C Y N 112 DA N6 N N N 113 DA N1 N Y N 114 DA C2 C Y N 115 DA N3 N Y N 116 DA C4 C Y N 117 DA HOP3 H N N 118 DA HOP2 H N N 119 DA "H5'" H N N 120 DA "H5''" H N N 121 DA "H4'" H N N 122 DA "H3'" H N N 123 DA "HO3'" H N N 124 DA "H2'" H N N 125 DA "H2''" H N N 126 DA "H1'" H N N 127 DA H8 H N N 128 DA H61 H N N 129 DA H62 H N N 130 DA H2 H N N 131 DC OP3 O N N 132 DC P P N N 133 DC OP1 O N N 134 DC OP2 O N N 135 DC "O5'" O N N 136 DC "C5'" C N N 137 DC "C4'" C N R 138 DC "O4'" O N N 139 DC "C3'" C N S 140 DC "O3'" O N N 141 DC "C2'" C N N 142 DC "C1'" C N R 143 DC N1 N N N 144 DC C2 C N N 145 DC O2 O N N 146 DC N3 N N N 147 DC C4 C N N 148 DC N4 N N N 149 DC C5 C N N 150 DC C6 C N N 151 DC HOP3 H N N 152 DC HOP2 H N N 153 DC "H5'" H N N 154 DC "H5''" H N N 155 DC "H4'" H N N 156 DC "H3'" H N N 157 DC "HO3'" H N N 158 DC "H2'" H N N 159 DC "H2''" H N N 160 DC "H1'" H N N 161 DC H41 H N N 162 DC H42 H N N 163 DC H5 H N N 164 DC H6 H N N 165 DG OP3 O N N 166 DG P P N N 167 DG OP1 O N N 168 DG OP2 O N N 169 DG "O5'" O N N 170 DG "C5'" C N N 171 DG "C4'" C N R 172 DG "O4'" O N N 173 DG "C3'" C N S 174 DG "O3'" O N N 175 DG "C2'" C N N 176 DG "C1'" C N R 177 DG N9 N Y N 178 DG C8 C Y N 179 DG N7 N Y N 180 DG C5 C Y N 181 DG C6 C N N 182 DG O6 O N N 183 DG N1 N N N 184 DG C2 C N N 185 DG N2 N N N 186 DG N3 N N N 187 DG C4 C Y N 188 DG HOP3 H N N 189 DG HOP2 H N N 190 DG "H5'" H N N 191 DG "H5''" H N N 192 DG "H4'" H N N 193 DG "H3'" H N N 194 DG "HO3'" H N N 195 DG "H2'" H N N 196 DG "H2''" H N N 197 DG "H1'" H N N 198 DG H8 H N N 199 DG H1 H N N 200 DG H21 H N N 201 DG H22 H N N 202 DT OP3 O N N 203 DT P P N N 204 DT OP1 O N N 205 DT OP2 O N N 206 DT "O5'" O N N 207 DT "C5'" C N N 208 DT "C4'" C N R 209 DT "O4'" O N N 210 DT "C3'" C N S 211 DT "O3'" O N N 212 DT "C2'" C N N 213 DT "C1'" C N R 214 DT N1 N N N 215 DT C2 C N N 216 DT O2 O N N 217 DT N3 N N N 218 DT C4 C N N 219 DT O4 O N N 220 DT C5 C N N 221 DT C7 C N N 222 DT C6 C N N 223 DT HOP3 H N N 224 DT HOP2 H N N 225 DT "H5'" H N N 226 DT "H5''" H N N 227 DT "H4'" H N N 228 DT "H3'" H N N 229 DT "HO3'" H N N 230 DT "H2'" H N N 231 DT "H2''" H N N 232 DT "H1'" H N N 233 DT H3 H N N 234 DT H71 H N N 235 DT H72 H N N 236 DT H73 H N N 237 DT H6 H N N 238 GLN N N N N 239 GLN CA C N S 240 GLN C C N N 241 GLN O O N N 242 GLN CB C N N 243 GLN CG C N N 244 GLN CD C N N 245 GLN OE1 O N N 246 GLN NE2 N N N 247 GLN OXT O N N 248 GLN H H N N 249 GLN H2 H N N 250 GLN HA H N N 251 GLN HB2 H N N 252 GLN HB3 H N N 253 GLN HG2 H N N 254 GLN HG3 H N N 255 GLN HE21 H N N 256 GLN HE22 H N N 257 GLN HXT H N N 258 GLU N N N N 259 GLU CA C N S 260 GLU C C N N 261 GLU O O N N 262 GLU CB C N N 263 GLU CG C N N 264 GLU CD C N N 265 GLU OE1 O N N 266 GLU OE2 O N N 267 GLU OXT O N N 268 GLU H H N N 269 GLU H2 H N N 270 GLU HA H N N 271 GLU HB2 H N N 272 GLU HB3 H N N 273 GLU HG2 H N N 274 GLU HG3 H N N 275 GLU HE2 H N N 276 GLU HXT H N N 277 GLY N N N N 278 GLY CA C N N 279 GLY C C N N 280 GLY O O N N 281 GLY OXT O N N 282 GLY H H N N 283 GLY H2 H N N 284 GLY HA2 H N N 285 GLY HA3 H N N 286 GLY HXT H N N 287 HIS N N N N 288 HIS CA C N S 289 HIS C C N N 290 HIS O O N N 291 HIS CB C N N 292 HIS CG C Y N 293 HIS ND1 N Y N 294 HIS CD2 C Y N 295 HIS CE1 C Y N 296 HIS NE2 N Y N 297 HIS OXT O N N 298 HIS H H N N 299 HIS H2 H N N 300 HIS HA H N N 301 HIS HB2 H N N 302 HIS HB3 H N N 303 HIS HD1 H N N 304 HIS HD2 H N N 305 HIS HE1 H N N 306 HIS HE2 H N N 307 HIS HXT H N N 308 HOH O O N N 309 HOH H1 H N N 310 HOH H2 H N N 311 ILE N N N N 312 ILE CA C N S 313 ILE C C N N 314 ILE O O N N 315 ILE CB C N S 316 ILE CG1 C N N 317 ILE CG2 C N N 318 ILE CD1 C N N 319 ILE OXT O N N 320 ILE H H N N 321 ILE H2 H N N 322 ILE HA H N N 323 ILE HB H N N 324 ILE HG12 H N N 325 ILE HG13 H N N 326 ILE HG21 H N N 327 ILE HG22 H N N 328 ILE HG23 H N N 329 ILE HD11 H N N 330 ILE HD12 H N N 331 ILE HD13 H N N 332 ILE HXT H N N 333 K K K N N 334 LEU N N N N 335 LEU CA C N S 336 LEU C C N N 337 LEU O O N N 338 LEU CB C N N 339 LEU CG C N N 340 LEU CD1 C N N 341 LEU CD2 C N N 342 LEU OXT O N N 343 LEU H H N N 344 LEU H2 H N N 345 LEU HA H N N 346 LEU HB2 H N N 347 LEU HB3 H N N 348 LEU HG H N N 349 LEU HD11 H N N 350 LEU HD12 H N N 351 LEU HD13 H N N 352 LEU HD21 H N N 353 LEU HD22 H N N 354 LEU HD23 H N N 355 LEU HXT H N N 356 LYS N N N N 357 LYS CA C N S 358 LYS C C N N 359 LYS O O N N 360 LYS CB C N N 361 LYS CG C N N 362 LYS CD C N N 363 LYS CE C N N 364 LYS NZ N N N 365 LYS OXT O N N 366 LYS H H N N 367 LYS H2 H N N 368 LYS HA H N N 369 LYS HB2 H N N 370 LYS HB3 H N N 371 LYS HG2 H N N 372 LYS HG3 H N N 373 LYS HD2 H N N 374 LYS HD3 H N N 375 LYS HE2 H N N 376 LYS HE3 H N N 377 LYS HZ1 H N N 378 LYS HZ2 H N N 379 LYS HZ3 H N N 380 LYS HXT H N N 381 MET N N N N 382 MET CA C N S 383 MET C C N N 384 MET O O N N 385 MET CB C N N 386 MET CG C N N 387 MET SD S N N 388 MET CE C N N 389 MET OXT O N N 390 MET H H N N 391 MET H2 H N N 392 MET HA H N N 393 MET HB2 H N N 394 MET HB3 H N N 395 MET HG2 H N N 396 MET HG3 H N N 397 MET HE1 H N N 398 MET HE2 H N N 399 MET HE3 H N N 400 MET HXT H N N 401 PHE N N N N 402 PHE CA C N S 403 PHE C C N N 404 PHE O O N N 405 PHE CB C N N 406 PHE CG C Y N 407 PHE CD1 C Y N 408 PHE CD2 C Y N 409 PHE CE1 C Y N 410 PHE CE2 C Y N 411 PHE CZ C Y N 412 PHE OXT O N N 413 PHE H H N N 414 PHE H2 H N N 415 PHE HA H N N 416 PHE HB2 H N N 417 PHE HB3 H N N 418 PHE HD1 H N N 419 PHE HD2 H N N 420 PHE HE1 H N N 421 PHE HE2 H N N 422 PHE HZ H N N 423 PHE HXT H N N 424 PRO N N N N 425 PRO CA C N S 426 PRO C C N N 427 PRO O O N N 428 PRO CB C N N 429 PRO CG C N N 430 PRO CD C N N 431 PRO OXT O N N 432 PRO H H N N 433 PRO HA H N N 434 PRO HB2 H N N 435 PRO HB3 H N N 436 PRO HG2 H N N 437 PRO HG3 H N N 438 PRO HD2 H N N 439 PRO HD3 H N N 440 PRO HXT H N N 441 SER N N N N 442 SER CA C N S 443 SER C C N N 444 SER O O N N 445 SER CB C N N 446 SER OG O N N 447 SER OXT O N N 448 SER H H N N 449 SER H2 H N N 450 SER HA H N N 451 SER HB2 H N N 452 SER HB3 H N N 453 SER HG H N N 454 SER HXT H N N 455 THR N N N N 456 THR CA C N S 457 THR C C N N 458 THR O O N N 459 THR CB C N R 460 THR OG1 O N N 461 THR CG2 C N N 462 THR OXT O N N 463 THR H H N N 464 THR H2 H N N 465 THR HA H N N 466 THR HB H N N 467 THR HG1 H N N 468 THR HG21 H N N 469 THR HG22 H N N 470 THR HG23 H N N 471 THR HXT H N N 472 TRP N N N N 473 TRP CA C N S 474 TRP C C N N 475 TRP O O N N 476 TRP CB C N N 477 TRP CG C Y N 478 TRP CD1 C Y N 479 TRP CD2 C Y N 480 TRP NE1 N Y N 481 TRP CE2 C Y N 482 TRP CE3 C Y N 483 TRP CZ2 C Y N 484 TRP CZ3 C Y N 485 TRP CH2 C Y N 486 TRP OXT O N N 487 TRP H H N N 488 TRP H2 H N N 489 TRP HA H N N 490 TRP HB2 H N N 491 TRP HB3 H N N 492 TRP HD1 H N N 493 TRP HE1 H N N 494 TRP HE3 H N N 495 TRP HZ2 H N N 496 TRP HZ3 H N N 497 TRP HH2 H N N 498 TRP HXT H N N 499 TYR N N N N 500 TYR CA C N S 501 TYR C C N N 502 TYR O O N N 503 TYR CB C N N 504 TYR CG C Y N 505 TYR CD1 C Y N 506 TYR CD2 C Y N 507 TYR CE1 C Y N 508 TYR CE2 C Y N 509 TYR CZ C Y N 510 TYR OH O N N 511 TYR OXT O N N 512 TYR H H N N 513 TYR H2 H N N 514 TYR HA H N N 515 TYR HB2 H N N 516 TYR HB3 H N N 517 TYR HD1 H N N 518 TYR HD2 H N N 519 TYR HE1 H N N 520 TYR HE2 H N N 521 TYR HH H N N 522 TYR HXT H N N 523 VAL N N N N 524 VAL CA C N S 525 VAL C C N N 526 VAL O O N N 527 VAL CB C N N 528 VAL CG1 C N N 529 VAL CG2 C N N 530 VAL OXT O N N 531 VAL H H N N 532 VAL H2 H N N 533 VAL HA H N N 534 VAL HB H N N 535 VAL HG11 H N N 536 VAL HG12 H N N 537 VAL HG13 H N N 538 VAL HG21 H N N 539 VAL HG22 H N N 540 VAL HG23 H N N 541 VAL HXT H N N 542 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 DA OP3 P sing N N 89 DA OP3 HOP3 sing N N 90 DA P OP1 doub N N 91 DA P OP2 sing N N 92 DA P "O5'" sing N N 93 DA OP2 HOP2 sing N N 94 DA "O5'" "C5'" sing N N 95 DA "C5'" "C4'" sing N N 96 DA "C5'" "H5'" sing N N 97 DA "C5'" "H5''" sing N N 98 DA "C4'" "O4'" sing N N 99 DA "C4'" "C3'" sing N N 100 DA "C4'" "H4'" sing N N 101 DA "O4'" "C1'" sing N N 102 DA "C3'" "O3'" sing N N 103 DA "C3'" "C2'" sing N N 104 DA "C3'" "H3'" sing N N 105 DA "O3'" "HO3'" sing N N 106 DA "C2'" "C1'" sing N N 107 DA "C2'" "H2'" sing N N 108 DA "C2'" "H2''" sing N N 109 DA "C1'" N9 sing N N 110 DA "C1'" "H1'" sing N N 111 DA N9 C8 sing Y N 112 DA N9 C4 sing Y N 113 DA C8 N7 doub Y N 114 DA C8 H8 sing N N 115 DA N7 C5 sing Y N 116 DA C5 C6 sing Y N 117 DA C5 C4 doub Y N 118 DA C6 N6 sing N N 119 DA C6 N1 doub Y N 120 DA N6 H61 sing N N 121 DA N6 H62 sing N N 122 DA N1 C2 sing Y N 123 DA C2 N3 doub Y N 124 DA C2 H2 sing N N 125 DA N3 C4 sing Y N 126 DC OP3 P sing N N 127 DC OP3 HOP3 sing N N 128 DC P OP1 doub N N 129 DC P OP2 sing N N 130 DC P "O5'" sing N N 131 DC OP2 HOP2 sing N N 132 DC "O5'" "C5'" sing N N 133 DC "C5'" "C4'" sing N N 134 DC "C5'" "H5'" sing N N 135 DC "C5'" "H5''" sing N N 136 DC "C4'" "O4'" sing N N 137 DC "C4'" "C3'" sing N N 138 DC "C4'" "H4'" sing N N 139 DC "O4'" "C1'" sing N N 140 DC "C3'" "O3'" sing N N 141 DC "C3'" "C2'" sing N N 142 DC "C3'" "H3'" sing N N 143 DC "O3'" "HO3'" sing N N 144 DC "C2'" "C1'" sing N N 145 DC "C2'" "H2'" sing N N 146 DC "C2'" "H2''" sing N N 147 DC "C1'" N1 sing N N 148 DC "C1'" "H1'" sing N N 149 DC N1 C2 sing N N 150 DC N1 C6 sing N N 151 DC C2 O2 doub N N 152 DC C2 N3 sing N N 153 DC N3 C4 doub N N 154 DC C4 N4 sing N N 155 DC C4 C5 sing N N 156 DC N4 H41 sing N N 157 DC N4 H42 sing N N 158 DC C5 C6 doub N N 159 DC C5 H5 sing N N 160 DC C6 H6 sing N N 161 DG OP3 P sing N N 162 DG OP3 HOP3 sing N N 163 DG P OP1 doub N N 164 DG P OP2 sing N N 165 DG P "O5'" sing N N 166 DG OP2 HOP2 sing N N 167 DG "O5'" "C5'" sing N N 168 DG "C5'" "C4'" sing N N 169 DG "C5'" "H5'" sing N N 170 DG "C5'" "H5''" sing N N 171 DG "C4'" "O4'" sing N N 172 DG "C4'" "C3'" sing N N 173 DG "C4'" "H4'" sing N N 174 DG "O4'" "C1'" sing N N 175 DG "C3'" "O3'" sing N N 176 DG "C3'" "C2'" sing N N 177 DG "C3'" "H3'" sing N N 178 DG "O3'" "HO3'" sing N N 179 DG "C2'" "C1'" sing N N 180 DG "C2'" "H2'" sing N N 181 DG "C2'" "H2''" sing N N 182 DG "C1'" N9 sing N N 183 DG "C1'" "H1'" sing N N 184 DG N9 C8 sing Y N 185 DG N9 C4 sing Y N 186 DG C8 N7 doub Y N 187 DG C8 H8 sing N N 188 DG N7 C5 sing Y N 189 DG C5 C6 sing N N 190 DG C5 C4 doub Y N 191 DG C6 O6 doub N N 192 DG C6 N1 sing N N 193 DG N1 C2 sing N N 194 DG N1 H1 sing N N 195 DG C2 N2 sing N N 196 DG C2 N3 doub N N 197 DG N2 H21 sing N N 198 DG N2 H22 sing N N 199 DG N3 C4 sing N N 200 DT OP3 P sing N N 201 DT OP3 HOP3 sing N N 202 DT P OP1 doub N N 203 DT P OP2 sing N N 204 DT P "O5'" sing N N 205 DT OP2 HOP2 sing N N 206 DT "O5'" "C5'" sing N N 207 DT "C5'" "C4'" sing N N 208 DT "C5'" "H5'" sing N N 209 DT "C5'" "H5''" sing N N 210 DT "C4'" "O4'" sing N N 211 DT "C4'" "C3'" sing N N 212 DT "C4'" "H4'" sing N N 213 DT "O4'" "C1'" sing N N 214 DT "C3'" "O3'" sing N N 215 DT "C3'" "C2'" sing N N 216 DT "C3'" "H3'" sing N N 217 DT "O3'" "HO3'" sing N N 218 DT "C2'" "C1'" sing N N 219 DT "C2'" "H2'" sing N N 220 DT "C2'" "H2''" sing N N 221 DT "C1'" N1 sing N N 222 DT "C1'" "H1'" sing N N 223 DT N1 C2 sing N N 224 DT N1 C6 sing N N 225 DT C2 O2 doub N N 226 DT C2 N3 sing N N 227 DT N3 C4 sing N N 228 DT N3 H3 sing N N 229 DT C4 O4 doub N N 230 DT C4 C5 sing N N 231 DT C5 C7 sing N N 232 DT C5 C6 doub N N 233 DT C7 H71 sing N N 234 DT C7 H72 sing N N 235 DT C7 H73 sing N N 236 DT C6 H6 sing N N 237 GLN N CA sing N N 238 GLN N H sing N N 239 GLN N H2 sing N N 240 GLN CA C sing N N 241 GLN CA CB sing N N 242 GLN CA HA sing N N 243 GLN C O doub N N 244 GLN C OXT sing N N 245 GLN CB CG sing N N 246 GLN CB HB2 sing N N 247 GLN CB HB3 sing N N 248 GLN CG CD sing N N 249 GLN CG HG2 sing N N 250 GLN CG HG3 sing N N 251 GLN CD OE1 doub N N 252 GLN CD NE2 sing N N 253 GLN NE2 HE21 sing N N 254 GLN NE2 HE22 sing N N 255 GLN OXT HXT sing N N 256 GLU N CA sing N N 257 GLU N H sing N N 258 GLU N H2 sing N N 259 GLU CA C sing N N 260 GLU CA CB sing N N 261 GLU CA HA sing N N 262 GLU C O doub N N 263 GLU C OXT sing N N 264 GLU CB CG sing N N 265 GLU CB HB2 sing N N 266 GLU CB HB3 sing N N 267 GLU CG CD sing N N 268 GLU CG HG2 sing N N 269 GLU CG HG3 sing N N 270 GLU CD OE1 doub N N 271 GLU CD OE2 sing N N 272 GLU OE2 HE2 sing N N 273 GLU OXT HXT sing N N 274 GLY N CA sing N N 275 GLY N H sing N N 276 GLY N H2 sing N N 277 GLY CA C sing N N 278 GLY CA HA2 sing N N 279 GLY CA HA3 sing N N 280 GLY C O doub N N 281 GLY C OXT sing N N 282 GLY OXT HXT sing N N 283 HIS N CA sing N N 284 HIS N H sing N N 285 HIS N H2 sing N N 286 HIS CA C sing N N 287 HIS CA CB sing N N 288 HIS CA HA sing N N 289 HIS C O doub N N 290 HIS C OXT sing N N 291 HIS CB CG sing N N 292 HIS CB HB2 sing N N 293 HIS CB HB3 sing N N 294 HIS CG ND1 sing Y N 295 HIS CG CD2 doub Y N 296 HIS ND1 CE1 doub Y N 297 HIS ND1 HD1 sing N N 298 HIS CD2 NE2 sing Y N 299 HIS CD2 HD2 sing N N 300 HIS CE1 NE2 sing Y N 301 HIS CE1 HE1 sing N N 302 HIS NE2 HE2 sing N N 303 HIS OXT HXT sing N N 304 HOH O H1 sing N N 305 HOH O H2 sing N N 306 ILE N CA sing N N 307 ILE N H sing N N 308 ILE N H2 sing N N 309 ILE CA C sing N N 310 ILE CA CB sing N N 311 ILE CA HA sing N N 312 ILE C O doub N N 313 ILE C OXT sing N N 314 ILE CB CG1 sing N N 315 ILE CB CG2 sing N N 316 ILE CB HB sing N N 317 ILE CG1 CD1 sing N N 318 ILE CG1 HG12 sing N N 319 ILE CG1 HG13 sing N N 320 ILE CG2 HG21 sing N N 321 ILE CG2 HG22 sing N N 322 ILE CG2 HG23 sing N N 323 ILE CD1 HD11 sing N N 324 ILE CD1 HD12 sing N N 325 ILE CD1 HD13 sing N N 326 ILE OXT HXT sing N N 327 LEU N CA sing N N 328 LEU N H sing N N 329 LEU N H2 sing N N 330 LEU CA C sing N N 331 LEU CA CB sing N N 332 LEU CA HA sing N N 333 LEU C O doub N N 334 LEU C OXT sing N N 335 LEU CB CG sing N N 336 LEU CB HB2 sing N N 337 LEU CB HB3 sing N N 338 LEU CG CD1 sing N N 339 LEU CG CD2 sing N N 340 LEU CG HG sing N N 341 LEU CD1 HD11 sing N N 342 LEU CD1 HD12 sing N N 343 LEU CD1 HD13 sing N N 344 LEU CD2 HD21 sing N N 345 LEU CD2 HD22 sing N N 346 LEU CD2 HD23 sing N N 347 LEU OXT HXT sing N N 348 LYS N CA sing N N 349 LYS N H sing N N 350 LYS N H2 sing N N 351 LYS CA C sing N N 352 LYS CA CB sing N N 353 LYS CA HA sing N N 354 LYS C O doub N N 355 LYS C OXT sing N N 356 LYS CB CG sing N N 357 LYS CB HB2 sing N N 358 LYS CB HB3 sing N N 359 LYS CG CD sing N N 360 LYS CG HG2 sing N N 361 LYS CG HG3 sing N N 362 LYS CD CE sing N N 363 LYS CD HD2 sing N N 364 LYS CD HD3 sing N N 365 LYS CE NZ sing N N 366 LYS CE HE2 sing N N 367 LYS CE HE3 sing N N 368 LYS NZ HZ1 sing N N 369 LYS NZ HZ2 sing N N 370 LYS NZ HZ3 sing N N 371 LYS OXT HXT sing N N 372 MET N CA sing N N 373 MET N H sing N N 374 MET N H2 sing N N 375 MET CA C sing N N 376 MET CA CB sing N N 377 MET CA HA sing N N 378 MET C O doub N N 379 MET C OXT sing N N 380 MET CB CG sing N N 381 MET CB HB2 sing N N 382 MET CB HB3 sing N N 383 MET CG SD sing N N 384 MET CG HG2 sing N N 385 MET CG HG3 sing N N 386 MET SD CE sing N N 387 MET CE HE1 sing N N 388 MET CE HE2 sing N N 389 MET CE HE3 sing N N 390 MET OXT HXT sing N N 391 PHE N CA sing N N 392 PHE N H sing N N 393 PHE N H2 sing N N 394 PHE CA C sing N N 395 PHE CA CB sing N N 396 PHE CA HA sing N N 397 PHE C O doub N N 398 PHE C OXT sing N N 399 PHE CB CG sing N N 400 PHE CB HB2 sing N N 401 PHE CB HB3 sing N N 402 PHE CG CD1 doub Y N 403 PHE CG CD2 sing Y N 404 PHE CD1 CE1 sing Y N 405 PHE CD1 HD1 sing N N 406 PHE CD2 CE2 doub Y N 407 PHE CD2 HD2 sing N N 408 PHE CE1 CZ doub Y N 409 PHE CE1 HE1 sing N N 410 PHE CE2 CZ sing Y N 411 PHE CE2 HE2 sing N N 412 PHE CZ HZ sing N N 413 PHE OXT HXT sing N N 414 PRO N CA sing N N 415 PRO N CD sing N N 416 PRO N H sing N N 417 PRO CA C sing N N 418 PRO CA CB sing N N 419 PRO CA HA sing N N 420 PRO C O doub N N 421 PRO C OXT sing N N 422 PRO CB CG sing N N 423 PRO CB HB2 sing N N 424 PRO CB HB3 sing N N 425 PRO CG CD sing N N 426 PRO CG HG2 sing N N 427 PRO CG HG3 sing N N 428 PRO CD HD2 sing N N 429 PRO CD HD3 sing N N 430 PRO OXT HXT sing N N 431 SER N CA sing N N 432 SER N H sing N N 433 SER N H2 sing N N 434 SER CA C sing N N 435 SER CA CB sing N N 436 SER CA HA sing N N 437 SER C O doub N N 438 SER C OXT sing N N 439 SER CB OG sing N N 440 SER CB HB2 sing N N 441 SER CB HB3 sing N N 442 SER OG HG sing N N 443 SER OXT HXT sing N N 444 THR N CA sing N N 445 THR N H sing N N 446 THR N H2 sing N N 447 THR CA C sing N N 448 THR CA CB sing N N 449 THR CA HA sing N N 450 THR C O doub N N 451 THR C OXT sing N N 452 THR CB OG1 sing N N 453 THR CB CG2 sing N N 454 THR CB HB sing N N 455 THR OG1 HG1 sing N N 456 THR CG2 HG21 sing N N 457 THR CG2 HG22 sing N N 458 THR CG2 HG23 sing N N 459 THR OXT HXT sing N N 460 TRP N CA sing N N 461 TRP N H sing N N 462 TRP N H2 sing N N 463 TRP CA C sing N N 464 TRP CA CB sing N N 465 TRP CA HA sing N N 466 TRP C O doub N N 467 TRP C OXT sing N N 468 TRP CB CG sing N N 469 TRP CB HB2 sing N N 470 TRP CB HB3 sing N N 471 TRP CG CD1 doub Y N 472 TRP CG CD2 sing Y N 473 TRP CD1 NE1 sing Y N 474 TRP CD1 HD1 sing N N 475 TRP CD2 CE2 doub Y N 476 TRP CD2 CE3 sing Y N 477 TRP NE1 CE2 sing Y N 478 TRP NE1 HE1 sing N N 479 TRP CE2 CZ2 sing Y N 480 TRP CE3 CZ3 doub Y N 481 TRP CE3 HE3 sing N N 482 TRP CZ2 CH2 doub Y N 483 TRP CZ2 HZ2 sing N N 484 TRP CZ3 CH2 sing Y N 485 TRP CZ3 HZ3 sing N N 486 TRP CH2 HH2 sing N N 487 TRP OXT HXT sing N N 488 TYR N CA sing N N 489 TYR N H sing N N 490 TYR N H2 sing N N 491 TYR CA C sing N N 492 TYR CA CB sing N N 493 TYR CA HA sing N N 494 TYR C O doub N N 495 TYR C OXT sing N N 496 TYR CB CG sing N N 497 TYR CB HB2 sing N N 498 TYR CB HB3 sing N N 499 TYR CG CD1 doub Y N 500 TYR CG CD2 sing Y N 501 TYR CD1 CE1 sing Y N 502 TYR CD1 HD1 sing N N 503 TYR CD2 CE2 doub Y N 504 TYR CD2 HD2 sing N N 505 TYR CE1 CZ doub Y N 506 TYR CE1 HE1 sing N N 507 TYR CE2 CZ sing Y N 508 TYR CE2 HE2 sing N N 509 TYR CZ OH sing N N 510 TYR OH HH sing N N 511 TYR OXT HXT sing N N 512 VAL N CA sing N N 513 VAL N H sing N N 514 VAL N H2 sing N N 515 VAL CA C sing N N 516 VAL CA CB sing N N 517 VAL CA HA sing N N 518 VAL C O doub N N 519 VAL C OXT sing N N 520 VAL CB CG1 sing N N 521 VAL CB CG2 sing N N 522 VAL CB HB sing N N 523 VAL CG1 HG11 sing N N 524 VAL CG1 HG12 sing N N 525 VAL CG1 HG13 sing N N 526 VAL CG2 HG21 sing N N 527 VAL CG2 HG22 sing N N 528 VAL CG2 HG23 sing N N 529 VAL OXT HXT sing N N 530 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3ZDC 'double helix' 3ZDC 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 5 1_555 B DC 12 2_555 0.036 -0.239 -0.027 -1.556 -9.534 -6.126 1 X_DG5:DC12_X X 5 ? X 12 ? 19 1 1 B DC 6 1_555 B DG 11 2_555 0.069 -0.105 -0.121 1.231 -4.171 -1.158 2 X_DC6:DG11_X X 6 ? X 11 ? 19 1 1 B DG 7 1_555 B DC 10 2_555 -0.048 -0.147 0.170 6.511 -14.652 2.915 3 X_DG7:DC10_X X 7 ? X 10 ? 19 1 1 B DT 8 1_555 B DA 9 2_555 0.082 -0.174 0.051 1.664 -12.144 2.394 4 X_DT8:DA9_X X 8 ? X 9 ? 20 1 1 B DA 9 1_555 B DT 8 2_555 -0.082 -0.174 0.051 -1.664 -12.144 2.394 5 X_DA9:DT8_X X 9 ? X 8 ? 20 1 1 B DC 10 1_555 B DG 7 2_555 0.048 -0.147 0.170 -6.511 -14.652 2.915 6 X_DC10:DG7_X X 10 ? X 7 ? 19 1 1 B DG 11 1_555 B DC 6 2_555 -0.069 -0.105 -0.121 -1.231 -4.171 -1.158 7 X_DG11:DC6_X X 11 ? X 6 ? 19 1 1 B DC 12 1_555 B DG 5 2_555 -0.036 -0.239 -0.027 1.556 -9.534 -6.126 8 X_DC12:DG5_X X 12 ? X 5 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 5 1_555 B DC 12 2_555 B DC 6 1_555 B DG 11 2_555 0.541 -0.757 3.222 1.372 3.741 32.163 -1.999 -0.734 3.136 6.719 -2.464 32.402 1 XX_DG5DC6:DG11DC12_XX X 5 ? X 12 ? X 6 ? X 11 ? 1 B DC 6 1_555 B DG 11 2_555 B DG 7 1_555 B DC 10 2_555 0.252 0.384 3.179 -1.525 9.692 32.284 -0.896 -0.680 3.145 16.948 2.666 33.704 2 XX_DC6DG7:DC10DG11_XX X 6 ? X 11 ? X 7 ? X 10 ? 1 B DG 7 1_555 B DC 10 2_555 B DT 8 1_555 B DA 9 2_555 0.671 -0.823 3.360 1.734 1.836 32.976 -1.764 -0.878 3.341 3.228 -3.049 33.070 3 XX_DG7DT8:DA9DC10_XX X 7 ? X 10 ? X 8 ? X 9 ? 1 B DT 8 1_555 B DA 9 2_555 B DA 9 1_555 B DT 8 2_555 0.000 -0.696 3.225 0.000 9.191 33.910 -2.476 0.000 2.942 15.410 0.000 35.098 4 XX_DT8DA9:DT8DA9_XX X 8 ? X 9 ? X 9 ? X 8 ? 1 B DA 9 1_555 B DT 8 2_555 B DC 10 1_555 B DG 7 2_555 -0.671 -0.823 3.360 -1.734 1.836 32.976 -1.764 0.878 3.341 3.228 3.049 33.070 5 XX_DA9DC10:DG7DT8_XX X 9 ? X 8 ? X 10 ? X 7 ? 1 B DC 10 1_555 B DG 7 2_555 B DG 11 1_555 B DC 6 2_555 -0.252 0.384 3.179 1.525 9.692 32.284 -0.896 0.680 3.145 16.948 -2.666 33.704 6 XX_DC10DG11:DC6DG7_XX X 10 ? X 7 ? X 11 ? X 6 ? 1 B DG 11 1_555 B DC 6 2_555 B DC 12 1_555 B DG 5 2_555 -0.541 -0.757 3.222 -1.372 3.741 32.163 -1.999 0.734 3.136 6.719 2.464 32.402 7 XX_DG11DC12:DG5DC6_XX X 11 ? X 6 ? X 12 ? X 5 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'EXOIX FLAP1 FRAGMENT COMPLEX STRUCTURE' # _atom_sites.entry_id 3ZDC _atom_sites.fract_transf_matrix[1][1] 0.015111 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006549 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028960 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA K N O P S # loop_