data_3ZGK # _entry.id 3ZGK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ZGK pdb_00003zgk 10.2210/pdb3zgk/pdb PDBE EBI-55114 ? ? WWPDB D_1290055114 ? ? BMRB 18910 ? ? # _pdbx_database_related.db_id 18910 _pdbx_database_related.details . _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZGK _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-12-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Tolchard, J.' 1 ? 'Chambers, V.S.' 2 ? 'Boutemy, L.S.' 3 ? 'Gathercole, R.L.' 4 ? 'Banfield, M.J.' 5 ? 'Blumenschein, T.M.' 6 ? # _citation.id primary _citation.title 'NMR Solution Structure of the Avr3A11 from Phytophthora Capsi' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tolchard, J.' 1 ? primary 'Chambers, V.S.' 2 ? primary 'Boutemy, L.S.' 3 ? primary 'Gathercole, R.L.' 4 ? primary 'Banfield, M.J.' 5 ? primary 'Blumenschein, T.M.' 6 ? # _cell.entry_id 3ZGK _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZGK _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description AVR3A11 _entity.formula_weight 8267.472 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GPGLTDLFKTEKAAVKKMAKAIMADPSKADDVYQKWADKGYTLTQLSDFLKSKTRGKYDRVYNGYMTYRDYV _entity_poly.pdbx_seq_one_letter_code_can GPGLTDLFKTEKAAVKKMAKAIMADPSKADDVYQKWADKGYTLTQLSDFLKSKTRGKYDRVYNGYMTYRDYV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 LEU n 1 5 THR n 1 6 ASP n 1 7 LEU n 1 8 PHE n 1 9 LYS n 1 10 THR n 1 11 GLU n 1 12 LYS n 1 13 ALA n 1 14 ALA n 1 15 VAL n 1 16 LYS n 1 17 LYS n 1 18 MET n 1 19 ALA n 1 20 LYS n 1 21 ALA n 1 22 ILE n 1 23 MET n 1 24 ALA n 1 25 ASP n 1 26 PRO n 1 27 SER n 1 28 LYS n 1 29 ALA n 1 30 ASP n 1 31 ASP n 1 32 VAL n 1 33 TYR n 1 34 GLN n 1 35 LYS n 1 36 TRP n 1 37 ALA n 1 38 ASP n 1 39 LYS n 1 40 GLY n 1 41 TYR n 1 42 THR n 1 43 LEU n 1 44 THR n 1 45 GLN n 1 46 LEU n 1 47 SER n 1 48 ASP n 1 49 PHE n 1 50 LEU n 1 51 LYS n 1 52 SER n 1 53 LYS n 1 54 THR n 1 55 ARG n 1 56 GLY n 1 57 LYS n 1 58 TYR n 1 59 ASP n 1 60 ARG n 1 61 VAL n 1 62 TYR n 1 63 ASN n 1 64 GLY n 1 65 TYR n 1 66 MET n 1 67 THR n 1 68 TYR n 1 69 ARG n 1 70 ASP n 1 71 TYR n 1 72 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PHYTOPHTHORA CAPSICI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4784 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name POPIN-F _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code G1K3S4_PHYCP _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession G1K3S4 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ZGK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 10 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 72 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession G1K3S4 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 65 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 70 _struct_ref_seq.pdbx_auth_seq_align_end 132 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3ZGK GLY A 1 ? UNP G1K3S4 ? ? 'expression tag' 61 1 1 3ZGK PRO A 2 ? UNP G1K3S4 ? ? 'expression tag' 62 2 1 3ZGK GLY A 3 ? UNP G1K3S4 ? ? 'SEE REMARK 999' 63 3 1 3ZGK LEU A 4 ? UNP G1K3S4 ? ? 'SEE REMARK 999' 64 4 1 3ZGK THR A 5 ? UNP G1K3S4 ? ? 'SEE REMARK 999' 65 5 1 3ZGK ASP A 6 ? UNP G1K3S4 ? ? 'SEE REMARK 999' 66 6 1 3ZGK LEU A 7 ? UNP G1K3S4 ? ? 'SEE REMARK 999' 67 7 1 3ZGK PHE A 8 ? UNP G1K3S4 ? ? 'SEE REMARK 999' 68 8 1 3ZGK LYS A 9 ? UNP G1K3S4 ? ? 'SEE REMARK 999' 69 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '1H-15N HSQC' 1 2 1 '1H-13C HSQC' 1 3 1 '1H-15N NOESY' 1 4 1 '1H-13C NOESY' 1 5 1 CBCACONH 1 6 1 HNCACB 1 7 1 CCCONH 1 8 1 'H(CCO)NH' 1 9 1 '1H-15N TOCSY' 1 10 1 'AROMATIC 1H-13C TROSY' 1 11 1 HBCBCGCDCEHE 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298.0 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1.0 _pdbx_nmr_exptl_sample_conditions.pH 8.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 3ZGK _pdbx_nmr_refine.method 'DISTANCE GEOMETRY, SIMULATED ANNEALING' _pdbx_nmr_refine.details 'STRUCTURES WERE CALCULATED USING THE SCRIPTS FROM THE RECOORD DATABASE' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 3ZGK _pdbx_nmr_details.text NONE # _pdbx_nmr_ensemble.entry_id 3ZGK _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST ENERGY' # _pdbx_nmr_representative.entry_id 3ZGK _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement CNS 1.3 'BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ, RICE,SIMONSON,WARREN' 1 'structure solution' NMRPipe ? ? 2 'structure solution' 'CcpNmr Analysis' ANALYSIS ? 3 'structure solution' UNIO ? ? 4 'structure solution' CYANA ? ? 5 'structure solution' 'CNS USING RECOORD SCRIPTS' SCRIPTS ? 6 # _exptl.entry_id 3ZGK _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 3ZGK _struct.title 'NMR solution structure of the RXLR effector AVR3a11 from Phytophthora Capsici' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZGK _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'PROTEIN BINDING, PLANT DISEASES, RXLR' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 10 ? MET A 23 ? THR A 70 MET A 83 1 ? 14 HELX_P HELX_P2 2 LYS A 28 ? LYS A 39 ? LYS A 88 LYS A 99 1 ? 12 HELX_P HELX_P3 3 THR A 42 ? THR A 44 ? THR A 102 THR A 104 5 ? 3 HELX_P HELX_P4 4 GLN A 45 ? LYS A 51 ? GLN A 105 LYS A 111 1 ? 7 HELX_P HELX_P5 5 TYR A 58 ? THR A 67 ? TYR A 118 THR A 127 1 ? 10 HELX_P HELX_P6 6 TYR A 68 ? TYR A 71 ? TYR A 128 TYR A 131 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 3ZGK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ZGK _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 61 61 GLY GLY A . n A 1 2 PRO 2 62 62 PRO PRO A . n A 1 3 GLY 3 63 63 GLY GLY A . n A 1 4 LEU 4 64 64 LEU LEU A . n A 1 5 THR 5 65 65 THR THR A . n A 1 6 ASP 6 66 66 ASP ASP A . n A 1 7 LEU 7 67 67 LEU LEU A . n A 1 8 PHE 8 68 68 PHE PHE A . n A 1 9 LYS 9 69 69 LYS LYS A . n A 1 10 THR 10 70 70 THR THR A . n A 1 11 GLU 11 71 71 GLU GLU A . n A 1 12 LYS 12 72 72 LYS LYS A . n A 1 13 ALA 13 73 73 ALA ALA A . n A 1 14 ALA 14 74 74 ALA ALA A . n A 1 15 VAL 15 75 75 VAL VAL A . n A 1 16 LYS 16 76 76 LYS LYS A . n A 1 17 LYS 17 77 77 LYS LYS A . n A 1 18 MET 18 78 78 MET MET A . n A 1 19 ALA 19 79 79 ALA ALA A . n A 1 20 LYS 20 80 80 LYS LYS A . n A 1 21 ALA 21 81 81 ALA ALA A . n A 1 22 ILE 22 82 82 ILE ILE A . n A 1 23 MET 23 83 83 MET MET A . n A 1 24 ALA 24 84 84 ALA ALA A . n A 1 25 ASP 25 85 85 ASP ASP A . n A 1 26 PRO 26 86 86 PRO PRO A . n A 1 27 SER 27 87 87 SER SER A . n A 1 28 LYS 28 88 88 LYS LYS A . n A 1 29 ALA 29 89 89 ALA ALA A . n A 1 30 ASP 30 90 90 ASP ASP A . n A 1 31 ASP 31 91 91 ASP ASP A . n A 1 32 VAL 32 92 92 VAL VAL A . n A 1 33 TYR 33 93 93 TYR TYR A . n A 1 34 GLN 34 94 94 GLN GLN A . n A 1 35 LYS 35 95 95 LYS LYS A . n A 1 36 TRP 36 96 96 TRP TRP A . n A 1 37 ALA 37 97 97 ALA ALA A . n A 1 38 ASP 38 98 98 ASP ASP A . n A 1 39 LYS 39 99 99 LYS LYS A . n A 1 40 GLY 40 100 100 GLY GLY A . n A 1 41 TYR 41 101 101 TYR TYR A . n A 1 42 THR 42 102 102 THR THR A . n A 1 43 LEU 43 103 103 LEU LEU A . n A 1 44 THR 44 104 104 THR THR A . n A 1 45 GLN 45 105 105 GLN GLN A . n A 1 46 LEU 46 106 106 LEU LEU A . n A 1 47 SER 47 107 107 SER SER A . n A 1 48 ASP 48 108 108 ASP ASP A . n A 1 49 PHE 49 109 109 PHE PHE A . n A 1 50 LEU 50 110 110 LEU LEU A . n A 1 51 LYS 51 111 111 LYS LYS A . n A 1 52 SER 52 112 112 SER SER A . n A 1 53 LYS 53 113 113 LYS LYS A . n A 1 54 THR 54 114 114 THR THR A . n A 1 55 ARG 55 115 115 ARG ARG A . n A 1 56 GLY 56 116 116 GLY GLY A . n A 1 57 LYS 57 117 117 LYS LYS A . n A 1 58 TYR 58 118 118 TYR TYR A . n A 1 59 ASP 59 119 119 ASP ASP A . n A 1 60 ARG 60 120 120 ARG ARG A . n A 1 61 VAL 61 121 121 VAL VAL A . n A 1 62 TYR 62 122 122 TYR TYR A . n A 1 63 ASN 63 123 123 ASN ASN A . n A 1 64 GLY 64 124 124 GLY GLY A . n A 1 65 TYR 65 125 125 TYR TYR A . n A 1 66 MET 66 126 126 MET MET A . n A 1 67 THR 67 127 127 THR THR A . n A 1 68 TYR 68 128 128 TYR TYR A . n A 1 69 ARG 69 129 129 ARG ARG A . n A 1 70 ASP 70 130 130 ASP ASP A . n A 1 71 TYR 71 131 131 TYR TYR A . n A 1 72 VAL 72 132 132 VAL VAL A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-01-08 2 'Structure model' 2 0 2019-04-03 3 'Structure model' 2 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Data collection' 4 2 'Structure model' 'Database references' 5 2 'Structure model' Other 6 2 'Structure model' 'Structure summary' 7 3 'Structure model' 'Data collection' 8 3 'Structure model' 'Database references' 9 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' audit_author 3 2 'Structure model' citation_author 4 2 'Structure model' database_PDB_rev 5 2 'Structure model' database_PDB_rev_record 6 2 'Structure model' pdbx_database_proc 7 2 'Structure model' pdbx_database_status 8 2 'Structure model' pdbx_nmr_representative 9 2 'Structure model' pdbx_validate_close_contact 10 2 'Structure model' pdbx_validate_planes 11 2 'Structure model' pdbx_validate_torsion 12 3 'Structure model' database_2 13 3 'Structure model' pdbx_database_status 14 3 'Structure model' pdbx_nmr_software 15 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.Cartn_x' 2 2 'Structure model' '_atom_site.Cartn_y' 3 2 'Structure model' '_atom_site.Cartn_z' 4 2 'Structure model' '_atom_site.pdbx_auth_atom_name' 5 2 'Structure model' '_audit_author.name' 6 2 'Structure model' '_citation_author.name' 7 2 'Structure model' '_pdbx_database_status.recvd_author_approval' 8 2 'Structure model' '_pdbx_nmr_representative.conformer_id' 9 2 'Structure model' '_pdbx_validate_close_contact.PDB_model_num' 10 2 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_1' 11 2 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_2' 12 2 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_1' 13 2 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_2' 14 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 15 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 16 2 'Structure model' '_pdbx_validate_close_contact.dist' 17 2 'Structure model' '_pdbx_validate_planes.PDB_model_num' 18 2 'Structure model' '_pdbx_validate_planes.rmsd' 19 2 'Structure model' '_pdbx_validate_torsion.PDB_model_num' 20 2 'Structure model' '_pdbx_validate_torsion.auth_comp_id' 21 2 'Structure model' '_pdbx_validate_torsion.auth_seq_id' 22 2 'Structure model' '_pdbx_validate_torsion.phi' 23 2 'Structure model' '_pdbx_validate_torsion.psi' 24 3 'Structure model' '_database_2.pdbx_DOI' 25 3 'Structure model' '_database_2.pdbx_database_accession' 26 3 'Structure model' '_pdbx_database_status.status_code_cs' 27 3 'Structure model' '_pdbx_database_status.status_code_mr' 28 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 29 3 'Structure model' '_pdbx_nmr_software.name' 30 3 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_entry_details.entry_id 3ZGK _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE 3ZGK SEQUENCE IS MAPPED TO THE CLOSEST UNIPROT REFERENCE G1K3S4. AUTHOR SUGGESTS THAT RESIDUES 63-69 IN THE COORDINATES ARE ACTUALLY FROM THE WILD TYPE PROTEIN. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASP 108 ? ? HZ3 A LYS 111 ? ? 1.55 2 1 OD1 A ASP 66 ? ? HZ2 A LYS 76 ? ? 1.59 3 1 HZ1 A LYS 72 ? ? OD2 A ASP 108 ? ? 1.59 4 2 OD2 A ASP 85 ? ? HZ3 A LYS 88 ? ? 1.54 5 2 OD2 A ASP 98 ? ? HZ2 A LYS 99 ? ? 1.57 6 2 HZ2 A LYS 117 ? ? OD2 A ASP 119 ? ? 1.59 7 3 H3 A GLY 61 ? ? OD2 A ASP 66 ? ? 1.54 8 3 HZ3 A LYS 95 ? ? OD2 A ASP 98 ? ? 1.55 9 3 OD1 A ASP 108 ? ? HZ1 A LYS 111 ? ? 1.58 10 3 HZ2 A LYS 69 ? ? OD2 A ASP 108 ? ? 1.59 11 3 HH12 A ARG 129 ? ? OXT A VAL 132 ? ? 1.59 12 3 HE A ARG 115 ? ? OD2 A ASP 119 ? ? 1.60 13 3 OD1 A ASP 119 ? ? HH21 A ARG 120 ? ? 1.60 14 4 HH21 A ARG 129 ? ? O A VAL 132 ? ? 1.54 15 5 OD2 A ASP 98 ? ? HZ3 A LYS 99 ? ? 1.51 16 5 OD2 A ASP 85 ? ? HZ3 A LYS 88 ? ? 1.56 17 5 HZ2 A LYS 72 ? ? OD2 A ASP 108 ? ? 1.59 18 6 HH22 A ARG 129 ? ? O A VAL 132 ? ? 1.56 19 6 OD2 A ASP 66 ? ? HZ1 A LYS 69 ? ? 1.59 20 7 HE A ARG 115 ? ? OD1 A ASP 119 ? ? 1.58 21 8 HZ1 A LYS 72 ? ? OD1 A ASP 108 ? ? 1.54 22 8 HH21 A ARG 129 ? ? O A VAL 132 ? ? 1.56 23 8 OD2 A ASP 85 ? ? HZ2 A LYS 88 ? ? 1.60 24 9 HZ3 A LYS 69 ? ? OE2 A GLU 71 ? ? 1.57 25 9 HZ2 A LYS 80 ? ? OD1 A ASP 85 ? ? 1.59 26 9 HZ1 A LYS 117 ? ? OD2 A ASP 119 ? ? 1.59 27 10 HH21 A ARG 129 ? ? O A VAL 132 ? ? 1.55 28 10 OD2 A ASP 108 ? ? HZ2 A LYS 113 ? ? 1.55 29 10 OD1 A ASP 108 ? ? HZ2 A LYS 111 ? ? 1.59 30 11 HH22 A ARG 129 ? ? O A VAL 132 ? ? 1.57 31 11 OD1 A ASP 108 ? ? HZ1 A LYS 113 ? ? 1.58 32 11 HZ3 A LYS 72 ? ? OD2 A ASP 108 ? ? 1.58 33 11 HZ2 A LYS 69 ? ? OE2 A GLU 71 ? ? 1.58 34 11 HH11 A ARG 115 ? ? OD1 A ASP 119 ? ? 1.60 35 12 HZ1 A LYS 95 ? ? OD2 A ASP 98 ? ? 1.54 36 12 OD1 A ASP 108 ? ? HZ2 A LYS 111 ? ? 1.56 37 12 HZ1 A LYS 117 ? ? OD2 A ASP 119 ? ? 1.57 38 13 OD2 A ASP 66 ? ? HZ2 A LYS 69 ? ? 1.53 39 13 OD1 A ASP 108 ? ? HZ3 A LYS 111 ? ? 1.56 40 13 HZ3 A LYS 113 ? ? OD2 A ASP 119 ? ? 1.57 41 14 OD2 A ASP 85 ? ? HZ3 A LYS 88 ? ? 1.56 42 14 OD1 A ASP 108 ? ? HZ1 A LYS 111 ? ? 1.56 43 14 HH12 A ARG 129 ? ? O A VAL 132 ? ? 1.58 44 14 HZ2 A LYS 72 ? ? OD2 A ASP 108 ? ? 1.58 45 15 OD2 A ASP 108 ? ? HZ3 A LYS 113 ? ? 1.58 46 15 OD2 A ASP 119 ? ? HE A ARG 120 ? ? 1.59 47 15 OD2 A ASP 66 ? ? HZ2 A LYS 69 ? ? 1.59 48 16 OD1 A ASP 108 ? ? HZ1 A LYS 111 ? ? 1.58 49 17 HZ3 A LYS 95 ? ? OD1 A ASP 98 ? ? 1.56 50 17 HH21 A ARG 129 ? ? O A VAL 132 ? ? 1.57 51 18 HZ3 A LYS 80 ? ? OD1 A ASP 85 ? ? 1.54 52 18 HZ1 A LYS 117 ? ? OD2 A ASP 119 ? ? 1.57 53 18 OD2 A ASP 66 ? ? HZ3 A LYS 72 ? ? 1.58 54 18 HZ3 A LYS 88 ? ? OD2 A ASP 91 ? ? 1.58 55 18 OD2 A ASP 98 ? ? HZ2 A LYS 99 ? ? 1.59 56 19 OD1 A ASP 108 ? ? HZ2 A LYS 111 ? ? 1.55 57 19 OD2 A ASP 98 ? ? HZ3 A LYS 99 ? ? 1.57 58 19 OD2 A ASP 66 ? ? HZ1 A LYS 69 ? ? 1.59 59 19 HZ3 A LYS 72 ? ? OD2 A ASP 108 ? ? 1.59 60 20 HZ3 A LYS 95 ? ? OD2 A ASP 98 ? ? 1.56 61 20 HZ2 A LYS 80 ? ? OD1 A ASP 85 ? ? 1.57 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 62 ? ? -98.82 31.24 2 1 LYS A 69 ? ? -143.73 11.21 3 1 THR A 70 ? ? -92.75 -159.12 4 1 ALA A 84 ? ? -91.27 -61.50 5 1 LEU A 110 ? ? -97.58 34.34 6 2 THR A 70 ? ? -146.08 49.99 7 2 ALA A 84 ? ? -95.95 -61.80 8 2 LEU A 103 ? ? 31.80 -79.68 9 2 SER A 112 ? ? -76.01 45.28 10 2 TYR A 118 ? ? -72.10 25.47 11 3 PRO A 62 ? ? -87.95 46.93 12 3 LEU A 64 ? ? 68.36 -67.64 13 3 ASP A 66 ? ? -106.54 -76.30 14 3 LYS A 69 ? ? 81.25 118.95 15 3 LYS A 113 ? ? 86.57 175.92 16 4 LYS A 69 ? ? -101.69 -169.19 17 4 TYR A 118 ? ? -75.13 26.65 18 5 LEU A 64 ? ? -141.20 -35.71 19 5 THR A 65 ? ? -143.92 -75.03 20 5 PHE A 68 ? ? 58.20 -171.15 21 5 LEU A 103 ? ? 57.13 -78.23 22 5 THR A 114 ? ? 73.09 -48.97 23 6 THR A 65 ? ? -154.56 85.27 24 6 LEU A 67 ? ? 71.06 -66.76 25 6 LYS A 111 ? ? 73.42 78.06 26 6 LYS A 113 ? ? -161.30 -44.24 27 6 ARG A 115 ? ? 67.75 -73.35 28 7 LEU A 64 ? ? -97.61 -85.66 29 7 LEU A 67 ? ? 59.15 -166.28 30 7 LYS A 69 ? ? -151.64 9.21 31 7 PRO A 86 ? ? -65.92 1.58 32 7 SER A 112 ? ? -62.48 90.30 33 7 LYS A 113 ? ? 78.74 96.33 34 7 THR A 114 ? ? 43.87 -89.95 35 8 LEU A 64 ? ? -172.41 -52.82 36 8 THR A 70 ? ? 59.16 136.42 37 8 SER A 112 ? ? -177.88 115.65 38 8 LYS A 113 ? ? 66.25 -72.84 39 8 ARG A 115 ? ? 65.84 -78.26 40 9 LYS A 69 ? ? 53.10 -161.28 41 9 THR A 70 ? ? -126.30 -50.48 42 9 ASP A 85 ? ? -112.75 79.99 43 9 LEU A 103 ? ? 62.79 73.64 44 9 THR A 104 ? ? -170.63 -60.80 45 9 LYS A 111 ? ? 84.61 127.05 46 9 LYS A 113 ? ? 67.73 -82.74 47 9 ARG A 129 ? ? -66.71 2.94 48 10 LEU A 103 ? ? 38.09 -84.36 49 10 LYS A 111 ? ? 26.64 61.88 50 10 THR A 114 ? ? -168.35 -47.90 51 10 ARG A 115 ? ? -177.73 108.10 52 11 THR A 65 ? ? -163.54 36.95 53 11 ASP A 66 ? ? -64.83 -78.92 54 11 PHE A 68 ? ? -174.26 -173.71 55 11 LYS A 69 ? ? 70.65 97.98 56 11 LYS A 111 ? ? -125.26 -71.15 57 11 SER A 112 ? ? 171.06 -165.27 58 11 THR A 114 ? ? 175.30 171.42 59 12 LEU A 64 ? ? -163.20 -48.26 60 12 LYS A 69 ? ? 89.17 78.12 61 12 GLU A 71 ? ? 67.43 -39.19 62 12 TYR A 118 ? ? -76.76 26.56 63 13 LEU A 64 ? ? 61.54 76.53 64 13 THR A 65 ? ? -143.01 20.74 65 13 ASP A 66 ? ? -81.56 36.20 66 13 THR A 114 ? ? 45.06 71.29 67 13 ARG A 115 ? ? 77.41 161.50 68 13 LYS A 117 ? ? -90.23 -60.68 69 14 LEU A 64 ? ? -154.57 -45.44 70 14 ASP A 66 ? ? -174.41 -77.46 71 14 THR A 104 ? ? 170.05 -42.31 72 14 THR A 114 ? ? -69.66 20.87 73 14 LYS A 117 ? ? -93.15 -62.35 74 15 PRO A 62 ? ? -36.42 131.25 75 15 ASP A 66 ? ? -94.60 -83.63 76 15 THR A 70 ? ? 87.05 111.26 77 15 GLU A 71 ? ? -63.85 9.91 78 15 THR A 102 ? ? -80.62 42.46 79 15 LEU A 103 ? ? 63.17 -72.13 80 15 LYS A 111 ? ? 73.06 103.58 81 15 SER A 112 ? ? -18.28 84.74 82 15 ARG A 115 ? ? 74.70 -71.66 83 16 GLU A 71 ? ? -82.57 30.58 84 16 LYS A 113 ? ? -148.90 -51.90 85 16 ARG A 115 ? ? -141.52 -24.02 86 16 LYS A 117 ? ? -96.14 -63.92 87 17 GLU A 71 ? ? -73.31 25.42 88 17 LYS A 111 ? ? 71.77 69.08 89 17 LYS A 113 ? ? -144.74 -52.97 90 17 THR A 114 ? ? -75.89 32.16 91 17 ARG A 115 ? ? 58.66 -147.25 92 18 LEU A 67 ? ? -135.92 -53.13 93 18 ALA A 84 ? ? -103.07 -60.56 94 18 LEU A 103 ? ? -68.07 79.65 95 18 THR A 104 ? ? 174.45 -46.42 96 18 LYS A 111 ? ? 74.62 36.36 97 18 THR A 114 ? ? 176.97 -156.75 98 18 TYR A 118 ? ? -75.78 25.89 99 18 TYR A 131 ? ? -136.89 -37.41 100 19 LYS A 69 ? ? 76.29 102.15 101 19 GLU A 71 ? ? 179.16 -50.86 102 19 SER A 112 ? ? -132.89 -153.63 103 19 THR A 114 ? ? 73.31 -48.29 104 19 ARG A 115 ? ? 162.91 -22.46 105 20 LEU A 64 ? ? 63.72 -80.43 106 20 THR A 65 ? ? -72.08 -72.08 107 20 ASP A 66 ? ? -106.05 -101.46 108 20 PHE A 68 ? ? 178.65 119.18 109 20 LYS A 111 ? ? 49.35 70.34 110 20 THR A 114 ? ? 75.79 -49.27 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 129 ? ? 0.078 'SIDE CHAIN' 2 3 ARG A 129 ? ? 0.099 'SIDE CHAIN' 3 5 ARG A 129 ? ? 0.096 'SIDE CHAIN' 4 7 ARG A 129 ? ? 0.106 'SIDE CHAIN' 5 9 ARG A 120 ? ? 0.092 'SIDE CHAIN' 6 13 ARG A 129 ? ? 0.102 'SIDE CHAIN' 7 14 ARG A 120 ? ? 0.086 'SIDE CHAIN' 8 14 ARG A 129 ? ? 0.092 'SIDE CHAIN' 9 18 ARG A 120 ? ? 0.092 'SIDE CHAIN' 10 20 ARG A 129 ? ? 0.100 'SIDE CHAIN' #