data_3ZH7 # _entry.id 3ZH7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3ZH7 PDBE EBI-55230 WWPDB D_1290055230 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3ZH5 unspecified 'THE STRUCTURE OF HAEMOPHILUS INFLUENZAE PROTEIN E' PDB 3ZH6 unspecified 'THE STRUCTURE OF HAEMOPHILUS INFLUENZAE SE_MET FORM OF PROTEIN E' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZH7 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-12-20 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Singh, B.' 1 'Al-Jubair, T.' 2 'Riesbeck, K.' 3 'Thunnissen, M.M.G.M.' 4 # _citation.id primary _citation.title 'The Unique Structure of Haemophilus Influenzae Protein E Reveals Multiple Binding Sites for Host Factors.' _citation.journal_abbrev Infect.Immun. _citation.journal_volume 81 _citation.page_first 801 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 0019-9567 _citation.journal_id_CSD 999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23275089 _citation.pdbx_database_id_DOI 10.1128/IAI.01111-12 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Singh, B.' 1 primary 'Al-Jubair, T.' 2 primary 'Morgelin, M.' 3 primary 'Thunnissen, M.M.' 4 primary 'Riesbeck, K.' 5 # _cell.entry_id 3ZH7 _cell.length_a 54.670 _cell.length_b 42.490 _cell.length_c 56.800 _cell.angle_alpha 90.00 _cell.angle_beta 116.31 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZH7 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN E' 14719.706 1 ? ? ? ? 2 polymer man 'PROTEIN E' 14861.797 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 water nat water 18.015 47 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AVKLAPPTDVRSGYIRLVKNVNYYIDSESIWVDNQEPQIVHFDAVVNLDKGLYVYPEPKRYARSVRQYKILNCANYHLTQ VRTDFYDEFWGQGLRAAPKKQKKHTLSLTPDTTLYNAAQIICANYGK ; ;AVKLAPPTDVRSGYIRLVKNVNYYIDSESIWVDNQEPQIVHFDAVVNLDKGLYVYPEPKRYARSVRQYKILNCANYHLTQ VRTDFYDEFWGQGLRAAPKKQKKHTLSLTPDTTLYNAAQIICANYGK ; A ? 2 'polypeptide(L)' no no ;AAVKLAPPTDVRSGYIRLVKNVNYYIDSESIWVDNQEPQIVHFDAVVNLDKGLYVYPEPKRYARSVRQYKILNCANYHLT QVRTDFYDEFWGQGLRAAPKKQKKHTLSLTPDTTLYNAAQIICANYGEA ; ;AAVKLAPPTDVRSGYIRLVKNVNYYIDSESIWVDNQEPQIVHFDAVVNLDKGLYVYPEPKRYARSVRQYKILNCANYHLT QVRTDFYDEFWGQGLRAAPKKQKKHTLSLTPDTTLYNAAQIICANYGEA ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 VAL n 1 3 LYS n 1 4 LEU n 1 5 ALA n 1 6 PRO n 1 7 PRO n 1 8 THR n 1 9 ASP n 1 10 VAL n 1 11 ARG n 1 12 SER n 1 13 GLY n 1 14 TYR n 1 15 ILE n 1 16 ARG n 1 17 LEU n 1 18 VAL n 1 19 LYS n 1 20 ASN n 1 21 VAL n 1 22 ASN n 1 23 TYR n 1 24 TYR n 1 25 ILE n 1 26 ASP n 1 27 SER n 1 28 GLU n 1 29 SER n 1 30 ILE n 1 31 TRP n 1 32 VAL n 1 33 ASP n 1 34 ASN n 1 35 GLN n 1 36 GLU n 1 37 PRO n 1 38 GLN n 1 39 ILE n 1 40 VAL n 1 41 HIS n 1 42 PHE n 1 43 ASP n 1 44 ALA n 1 45 VAL n 1 46 VAL n 1 47 ASN n 1 48 LEU n 1 49 ASP n 1 50 LYS n 1 51 GLY n 1 52 LEU n 1 53 TYR n 1 54 VAL n 1 55 TYR n 1 56 PRO n 1 57 GLU n 1 58 PRO n 1 59 LYS n 1 60 ARG n 1 61 TYR n 1 62 ALA n 1 63 ARG n 1 64 SER n 1 65 VAL n 1 66 ARG n 1 67 GLN n 1 68 TYR n 1 69 LYS n 1 70 ILE n 1 71 LEU n 1 72 ASN n 1 73 CYS n 1 74 ALA n 1 75 ASN n 1 76 TYR n 1 77 HIS n 1 78 LEU n 1 79 THR n 1 80 GLN n 1 81 VAL n 1 82 ARG n 1 83 THR n 1 84 ASP n 1 85 PHE n 1 86 TYR n 1 87 ASP n 1 88 GLU n 1 89 PHE n 1 90 TRP n 1 91 GLY n 1 92 GLN n 1 93 GLY n 1 94 LEU n 1 95 ARG n 1 96 ALA n 1 97 ALA n 1 98 PRO n 1 99 LYS n 1 100 LYS n 1 101 GLN n 1 102 LYS n 1 103 LYS n 1 104 HIS n 1 105 THR n 1 106 LEU n 1 107 SER n 1 108 LEU n 1 109 THR n 1 110 PRO n 1 111 ASP n 1 112 THR n 1 113 THR n 1 114 LEU n 1 115 TYR n 1 116 ASN n 1 117 ALA n 1 118 ALA n 1 119 GLN n 1 120 ILE n 1 121 ILE n 1 122 CYS n 1 123 ALA n 1 124 ASN n 1 125 TYR n 1 126 GLY n 1 127 LYS n 2 1 ALA n 2 2 ALA n 2 3 VAL n 2 4 LYS n 2 5 LEU n 2 6 ALA n 2 7 PRO n 2 8 PRO n 2 9 THR n 2 10 ASP n 2 11 VAL n 2 12 ARG n 2 13 SER n 2 14 GLY n 2 15 TYR n 2 16 ILE n 2 17 ARG n 2 18 LEU n 2 19 VAL n 2 20 LYS n 2 21 ASN n 2 22 VAL n 2 23 ASN n 2 24 TYR n 2 25 TYR n 2 26 ILE n 2 27 ASP n 2 28 SER n 2 29 GLU n 2 30 SER n 2 31 ILE n 2 32 TRP n 2 33 VAL n 2 34 ASP n 2 35 ASN n 2 36 GLN n 2 37 GLU n 2 38 PRO n 2 39 GLN n 2 40 ILE n 2 41 VAL n 2 42 HIS n 2 43 PHE n 2 44 ASP n 2 45 ALA n 2 46 VAL n 2 47 VAL n 2 48 ASN n 2 49 LEU n 2 50 ASP n 2 51 LYS n 2 52 GLY n 2 53 LEU n 2 54 TYR n 2 55 VAL n 2 56 TYR n 2 57 PRO n 2 58 GLU n 2 59 PRO n 2 60 LYS n 2 61 ARG n 2 62 TYR n 2 63 ALA n 2 64 ARG n 2 65 SER n 2 66 VAL n 2 67 ARG n 2 68 GLN n 2 69 TYR n 2 70 LYS n 2 71 ILE n 2 72 LEU n 2 73 ASN n 2 74 CYS n 2 75 ALA n 2 76 ASN n 2 77 TYR n 2 78 HIS n 2 79 LEU n 2 80 THR n 2 81 GLN n 2 82 VAL n 2 83 ARG n 2 84 THR n 2 85 ASP n 2 86 PHE n 2 87 TYR n 2 88 ASP n 2 89 GLU n 2 90 PHE n 2 91 TRP n 2 92 GLY n 2 93 GLN n 2 94 GLY n 2 95 LEU n 2 96 ARG n 2 97 ALA n 2 98 ALA n 2 99 PRO n 2 100 LYS n 2 101 LYS n 2 102 GLN n 2 103 LYS n 2 104 LYS n 2 105 HIS n 2 106 THR n 2 107 LEU n 2 108 SER n 2 109 LEU n 2 110 THR n 2 111 PRO n 2 112 ASP n 2 113 THR n 2 114 THR n 2 115 LEU n 2 116 TYR n 2 117 ASN n 2 118 ALA n 2 119 ALA n 2 120 GLN n 2 121 ILE n 2 122 ILE n 2 123 CYS n 2 124 ALA n 2 125 ASN n 2 126 TYR n 2 127 GLY n 2 128 GLU n 2 129 ALA n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'HAEMOPHILUS INFLUENZAE' 727 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'HAEMOPHILUS INFLUENZAE' 727 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP C4F5U7_HAEIF 1 ? ? C4F5U7 ? 2 UNP C4F5U7_HAEIF 2 ? ? C4F5U7 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3ZH7 A 3 ? 127 ? C4F5U7 29 ? 153 ? 29 153 2 2 3ZH7 B 4 ? 129 ? C4F5U7 29 ? 154 ? 29 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3ZH7 ALA A 1 ? UNP C4F5U7 ? ? 'expression tag' 27 1 1 3ZH7 VAL A 2 ? UNP C4F5U7 ? ? 'expression tag' 28 2 2 3ZH7 ALA B 1 ? UNP C4F5U7 ? ? 'expression tag' 26 3 2 3ZH7 ALA B 2 ? UNP C4F5U7 ? ? 'expression tag' 27 4 2 3ZH7 VAL B 3 ? UNP C4F5U7 ? ? 'expression tag' 28 5 2 3ZH7 GLU B 128 ? UNP C4F5U7 LYS 153 conflict 153 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3ZH7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.75 _exptl_crystal.density_percent_sol 29.7 _exptl_crystal.description 'STRUCTURE WAS SOLVED WITH STRUCTURE FROM OTHER CRYSTAL FORM OF PE.' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100 MM BISTRIS PROPANE PH 6.5, 200 MM NAI AND 20% W/V POLYETHYLENE GLYCOL 3350' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2011-06-30 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I911-3' _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I911-3 _diffrn_source.pdbx_wavelength 1 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3ZH7 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 29.00 _reflns.d_resolution_high 2.10 _reflns.number_obs 12867 _reflns.number_all ? _reflns.percent_possible_obs 91.4 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.94 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.49 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 79.8 _reflns_shell.Rmerge_I_obs 0.46 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.03 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ZH7 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13338 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.01 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.298 _refine.ls_d_res_high 2.102 _refine.ls_percent_reflns_obs 96.53 _refine.ls_R_factor_obs 0.2035 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2007 _refine.ls_R_factor_R_free 0.2584 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 671 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -1.0340 _refine.aniso_B[2][2] -6.9686 _refine.aniso_B[3][3] 8.0025 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -8.6236 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.439 _refine.solvent_model_param_bsol 40.955 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.89 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.57 _refine.pdbx_overall_phase_error 27.47 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2090 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 47 _refine_hist.number_atoms_total 2145 _refine_hist.d_res_high 2.102 _refine_hist.d_res_low 28.298 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 2152 'X-RAY DIFFRACTION' ? f_angle_d 1.029 ? ? 2923 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.474 ? ? 793 'X-RAY DIFFRACTION' ? f_chiral_restr 0.057 ? ? 316 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 375 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.1018 2.2640 2161 0.2726 84.00 0.3279 . . 125 . . 'X-RAY DIFFRACTION' . 2.2640 2.4918 2619 0.2359 100.00 0.2578 . . 124 . . 'X-RAY DIFFRACTION' . 2.4918 2.8520 2590 0.2242 100.00 0.3008 . . 138 . . 'X-RAY DIFFRACTION' . 2.8520 3.5921 2626 0.1858 100.00 0.2544 . . 139 . . 'X-RAY DIFFRACTION' . 3.5921 28.3003 2671 0.1807 99.00 0.2338 . . 145 . . # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.282500 _struct_ncs_oper.matrix[1][2] -0.229300 _struct_ncs_oper.matrix[1][3] -0.931500 _struct_ncs_oper.matrix[2][1] -0.199500 _struct_ncs_oper.matrix[2][2] -0.963800 _struct_ncs_oper.matrix[2][3] 0.176800 _struct_ncs_oper.matrix[3][1] -0.938300 _struct_ncs_oper.matrix[3][2] 0.135900 _struct_ncs_oper.matrix[3][3] -0.318000 _struct_ncs_oper.vector[1] 14.97170 _struct_ncs_oper.vector[2] -23.32830 _struct_ncs_oper.vector[3] 26.05550 # _struct.entry_id 3ZH7 _struct.title 'The structure of crystal form II of Haemophilus influenzae protein E' _struct.pdbx_descriptor 'PROTEIN E' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZH7 _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 112 ? GLY A 126 ? THR A 138 GLY A 152 1 ? 15 HELX_P HELX_P2 2 GLU B 29 ? ILE B 31 ? GLU B 54 ILE B 56 5 ? 3 HELX_P HELX_P3 3 LEU B 115 ? TYR B 126 ? LEU B 140 TYR B 151 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 73 SG ? ? ? 1_555 A CYS 122 SG ? ? A CYS 99 A CYS 148 1_555 ? ? ? ? ? ? ? 2.032 ? disulf2 disulf ? ? B CYS 74 SG ? ? ? 1_555 B CYS 123 SG ? ? B CYS 99 B CYS 148 1_555 ? ? ? ? ? ? ? 2.032 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 1 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 26 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 ALA _struct_mon_prot_cis.pdbx_label_seq_id_2 2 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ALA _struct_mon_prot_cis.pdbx_auth_seq_id_2 27 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.69 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 6 ? AC ? 2 ? BA ? 6 ? BB ? 4 ? BC ? 2 ? BD ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AC 1 2 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel BA 4 5 ? anti-parallel BA 5 6 ? anti-parallel BB 1 2 ? anti-parallel BB 2 3 ? anti-parallel BB 3 4 ? parallel BC 1 2 ? anti-parallel BD 1 2 ? anti-parallel BD 2 3 ? anti-parallel BD 3 4 ? anti-parallel BD 4 5 ? anti-parallel BD 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TYR A 14 ? LEU A 17 ? TYR A 40 LEU A 43 AA 2 ASN A 20 ? VAL A 32 ? ASN A 46 VAL A 58 AA 3 ILE A 39 ? LEU A 52 ? ILE A 65 LEU A 78 AA 4 ALA A 62 ? ASN A 72 ? ALA A 88 ASN A 98 AA 5 HIS A 77 ? TYR A 86 ? HIS A 103 TYR A 112 AA 6 ARG A 95 ? ALA A 96 ? ARG A 121 ALA A 122 AB 1 TYR A 14 ? LEU A 17 ? TYR A 40 LEU A 43 AB 2 ASN A 20 ? VAL A 32 ? ASN A 46 VAL A 58 AB 3 ILE A 39 ? LEU A 52 ? ILE A 65 LEU A 78 AB 4 ALA A 62 ? ASN A 72 ? ALA A 88 ASN A 98 AB 5 HIS A 77 ? TYR A 86 ? HIS A 103 TYR A 112 AB 6 HIS A 104 ? SER A 107 ? HIS A 130 SER A 133 AC 1 ARG A 95 ? ALA A 96 ? ARG A 121 ALA A 122 AC 2 HIS A 77 ? TYR A 86 ? HIS A 103 TYR A 112 BA 1 TYR B 15 ? ARG B 17 ? TYR B 40 ARG B 42 BA 2 TYR B 24 ? ASP B 27 ? TYR B 49 ASP B 52 BA 3 ILE B 40 ? LEU B 53 ? ILE B 65 LEU B 78 BA 4 ALA B 63 ? ASN B 73 ? ALA B 88 ASN B 98 BA 5 HIS B 78 ? GLU B 89 ? HIS B 103 GLU B 114 BA 6 GLN B 93 ? ALA B 97 ? GLN B 118 ALA B 122 BB 1 TYR B 15 ? ARG B 17 ? TYR B 40 ARG B 42 BB 2 TYR B 24 ? ASP B 27 ? TYR B 49 ASP B 52 BB 3 ILE B 40 ? LEU B 53 ? ILE B 65 LEU B 78 BB 4 TRP B 32 ? VAL B 33 ? TRP B 57 VAL B 58 BC 1 GLN B 93 ? ALA B 97 ? GLN B 118 ALA B 122 BC 2 HIS B 78 ? GLU B 89 ? HIS B 103 GLU B 114 BD 1 TYR B 15 ? ARG B 17 ? TYR B 40 ARG B 42 BD 2 TYR B 24 ? ASP B 27 ? TYR B 49 ASP B 52 BD 3 ILE B 40 ? LEU B 53 ? ILE B 65 LEU B 78 BD 4 ALA B 63 ? ASN B 73 ? ALA B 88 ASN B 98 BD 5 HIS B 78 ? GLU B 89 ? HIS B 103 GLU B 114 BD 6 HIS B 105 ? SER B 108 ? HIS B 130 SER B 133 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 O LEU A 17 ? O LEU A 43 N ASN A 20 ? N ASN A 46 AA 2 3 N TRP A 31 ? N TRP A 57 O HIS A 41 ? O HIS A 67 AA 3 4 N LEU A 52 ? N LEU A 78 O ALA A 62 ? O ALA A 88 AA 4 5 N ASN A 72 ? N ASN A 98 O HIS A 77 ? O HIS A 103 AA 5 6 N PHE A 85 ? N PHE A 111 O ALA A 96 ? O ALA A 122 AB 1 2 O LEU A 17 ? O LEU A 43 N ASN A 20 ? N ASN A 46 AB 2 3 N TRP A 31 ? N TRP A 57 O HIS A 41 ? O HIS A 67 AB 3 4 N LEU A 52 ? N LEU A 78 O ALA A 62 ? O ALA A 88 AB 4 5 N ASN A 72 ? N ASN A 98 O HIS A 77 ? O HIS A 103 AB 5 6 N GLN A 80 ? N GLN A 106 O HIS A 104 ? O HIS A 130 AC 1 2 N ALA A 96 ? N ALA A 122 O PHE A 85 ? O PHE A 111 BA 1 2 N ILE B 16 ? N ILE B 41 O ILE B 26 ? O ILE B 51 BA 2 3 N ASP B 27 ? N ASP B 52 O ASP B 44 ? O ASP B 69 BA 3 4 N LEU B 53 ? N LEU B 78 O ALA B 63 ? O ALA B 88 BA 4 5 N ASN B 73 ? N ASN B 98 O HIS B 78 ? O HIS B 103 BA 5 6 N GLU B 89 ? N GLU B 114 O GLN B 93 ? O GLN B 118 BB 1 2 N ILE B 16 ? N ILE B 41 O ILE B 26 ? O ILE B 51 BB 2 3 N ASP B 27 ? N ASP B 52 O ASP B 44 ? O ASP B 69 BB 3 4 N HIS B 42 ? N HIS B 67 O TRP B 32 ? O TRP B 57 BC 1 2 N ALA B 97 ? N ALA B 122 O PHE B 86 ? O PHE B 111 BD 1 2 N ILE B 16 ? N ILE B 41 O ILE B 26 ? O ILE B 51 BD 2 3 N ASP B 27 ? N ASP B 52 O ASP B 44 ? O ASP B 69 BD 3 4 N LEU B 53 ? N LEU B 78 O ALA B 63 ? O ALA B 88 BD 4 5 N ASN B 73 ? N ASN B 98 O HIS B 78 ? O HIS B 103 BD 5 6 N GLN B 81 ? N GLN B 106 O HIS B 105 ? O HIS B 130 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO B 1155' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE EDO A 1154' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LYS A 103 ? LYS A 129 . ? 1_555 ? 2 AC1 5 SER B 30 ? SER B 55 . ? 1_555 ? 3 AC1 5 PHE B 43 ? PHE B 68 . ? 1_555 ? 4 AC1 5 ASP B 44 ? ASP B 69 . ? 1_555 ? 5 AC1 5 TYR B 69 ? TYR B 94 . ? 1_555 ? 6 AC2 6 LYS A 69 ? LYS A 95 . ? 1_555 ? 7 AC2 6 LEU A 78 ? LEU A 104 . ? 1_555 ? 8 AC2 6 GLN A 80 ? GLN A 106 . ? 1_555 ? 9 AC2 6 HIS A 104 ? HIS A 130 . ? 1_555 ? 10 AC2 6 LEU A 106 ? LEU A 132 . ? 1_555 ? 11 AC2 6 HOH E . ? HOH A 2025 . ? 1_555 ? # _database_PDB_matrix.entry_id 3ZH7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ZH7 _atom_sites.fract_transf_matrix[1][1] 0.018292 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.009044 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023535 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019640 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 27 27 ALA ALA A . n A 1 2 VAL 2 28 28 VAL VAL A . n A 1 3 LYS 3 29 29 LYS LYS A . n A 1 4 LEU 4 30 30 LEU LEU A . n A 1 5 ALA 5 31 31 ALA ALA A . n A 1 6 PRO 6 32 32 PRO PRO A . n A 1 7 PRO 7 33 33 PRO PRO A . n A 1 8 THR 8 34 34 THR THR A . n A 1 9 ASP 9 35 35 ASP ASP A . n A 1 10 VAL 10 36 36 VAL VAL A . n A 1 11 ARG 11 37 37 ARG ARG A . n A 1 12 SER 12 38 38 SER SER A . n A 1 13 GLY 13 39 39 GLY GLY A . n A 1 14 TYR 14 40 40 TYR TYR A . n A 1 15 ILE 15 41 41 ILE ILE A . n A 1 16 ARG 16 42 42 ARG ARG A . n A 1 17 LEU 17 43 43 LEU LEU A . n A 1 18 VAL 18 44 44 VAL VAL A . n A 1 19 LYS 19 45 45 LYS LYS A . n A 1 20 ASN 20 46 46 ASN ASN A . n A 1 21 VAL 21 47 47 VAL VAL A . n A 1 22 ASN 22 48 48 ASN ASN A . n A 1 23 TYR 23 49 49 TYR TYR A . n A 1 24 TYR 24 50 50 TYR TYR A . n A 1 25 ILE 25 51 51 ILE ILE A . n A 1 26 ASP 26 52 52 ASP ASP A . n A 1 27 SER 27 53 53 SER SER A . n A 1 28 GLU 28 54 54 GLU GLU A . n A 1 29 SER 29 55 55 SER SER A . n A 1 30 ILE 30 56 56 ILE ILE A . n A 1 31 TRP 31 57 57 TRP TRP A . n A 1 32 VAL 32 58 58 VAL VAL A . n A 1 33 ASP 33 59 59 ASP ASP A . n A 1 34 ASN 34 60 60 ASN ASN A . n A 1 35 GLN 35 61 61 GLN GLN A . n A 1 36 GLU 36 62 62 GLU GLU A . n A 1 37 PRO 37 63 63 PRO PRO A . n A 1 38 GLN 38 64 64 GLN GLN A . n A 1 39 ILE 39 65 65 ILE ILE A . n A 1 40 VAL 40 66 66 VAL VAL A . n A 1 41 HIS 41 67 67 HIS HIS A . n A 1 42 PHE 42 68 68 PHE PHE A . n A 1 43 ASP 43 69 69 ASP ASP A . n A 1 44 ALA 44 70 70 ALA ALA A . n A 1 45 VAL 45 71 71 VAL VAL A . n A 1 46 VAL 46 72 72 VAL VAL A . n A 1 47 ASN 47 73 73 ASN ASN A . n A 1 48 LEU 48 74 74 LEU LEU A . n A 1 49 ASP 49 75 75 ASP ASP A . n A 1 50 LYS 50 76 76 LYS LYS A . n A 1 51 GLY 51 77 77 GLY GLY A . n A 1 52 LEU 52 78 78 LEU LEU A . n A 1 53 TYR 53 79 79 TYR TYR A . n A 1 54 VAL 54 80 80 VAL VAL A . n A 1 55 TYR 55 81 81 TYR TYR A . n A 1 56 PRO 56 82 82 PRO PRO A . n A 1 57 GLU 57 83 83 GLU GLU A . n A 1 58 PRO 58 84 84 PRO PRO A . n A 1 59 LYS 59 85 85 LYS LYS A . n A 1 60 ARG 60 86 86 ARG ARG A . n A 1 61 TYR 61 87 87 TYR TYR A . n A 1 62 ALA 62 88 88 ALA ALA A . n A 1 63 ARG 63 89 89 ARG ARG A . n A 1 64 SER 64 90 90 SER SER A . n A 1 65 VAL 65 91 91 VAL VAL A . n A 1 66 ARG 66 92 92 ARG ARG A . n A 1 67 GLN 67 93 93 GLN GLN A . n A 1 68 TYR 68 94 94 TYR TYR A . n A 1 69 LYS 69 95 95 LYS LYS A . n A 1 70 ILE 70 96 96 ILE ILE A . n A 1 71 LEU 71 97 97 LEU LEU A . n A 1 72 ASN 72 98 98 ASN ASN A . n A 1 73 CYS 73 99 99 CYS CYS A . n A 1 74 ALA 74 100 100 ALA ALA A . n A 1 75 ASN 75 101 101 ASN ASN A . n A 1 76 TYR 76 102 102 TYR TYR A . n A 1 77 HIS 77 103 103 HIS HIS A . n A 1 78 LEU 78 104 104 LEU LEU A . n A 1 79 THR 79 105 105 THR THR A . n A 1 80 GLN 80 106 106 GLN GLN A . n A 1 81 VAL 81 107 107 VAL VAL A . n A 1 82 ARG 82 108 108 ARG ARG A . n A 1 83 THR 83 109 109 THR THR A . n A 1 84 ASP 84 110 110 ASP ASP A . n A 1 85 PHE 85 111 111 PHE PHE A . n A 1 86 TYR 86 112 112 TYR TYR A . n A 1 87 ASP 87 113 113 ASP ASP A . n A 1 88 GLU 88 114 114 GLU GLU A . n A 1 89 PHE 89 115 115 PHE PHE A . n A 1 90 TRP 90 116 116 TRP TRP A . n A 1 91 GLY 91 117 117 GLY GLY A . n A 1 92 GLN 92 118 118 GLN GLN A . n A 1 93 GLY 93 119 119 GLY GLY A . n A 1 94 LEU 94 120 120 LEU LEU A . n A 1 95 ARG 95 121 121 ARG ARG A . n A 1 96 ALA 96 122 122 ALA ALA A . n A 1 97 ALA 97 123 123 ALA ALA A . n A 1 98 PRO 98 124 124 PRO PRO A . n A 1 99 LYS 99 125 125 LYS LYS A . n A 1 100 LYS 100 126 126 LYS LYS A . n A 1 101 GLN 101 127 127 GLN GLN A . n A 1 102 LYS 102 128 128 LYS LYS A . n A 1 103 LYS 103 129 129 LYS LYS A . n A 1 104 HIS 104 130 130 HIS HIS A . n A 1 105 THR 105 131 131 THR THR A . n A 1 106 LEU 106 132 132 LEU LEU A . n A 1 107 SER 107 133 133 SER SER A . n A 1 108 LEU 108 134 134 LEU LEU A . n A 1 109 THR 109 135 135 THR THR A . n A 1 110 PRO 110 136 136 PRO PRO A . n A 1 111 ASP 111 137 137 ASP ASP A . n A 1 112 THR 112 138 138 THR THR A . n A 1 113 THR 113 139 139 THR THR A . n A 1 114 LEU 114 140 140 LEU LEU A . n A 1 115 TYR 115 141 141 TYR TYR A . n A 1 116 ASN 116 142 142 ASN ASN A . n A 1 117 ALA 117 143 143 ALA ALA A . n A 1 118 ALA 118 144 144 ALA ALA A . n A 1 119 GLN 119 145 145 GLN GLN A . n A 1 120 ILE 120 146 146 ILE ILE A . n A 1 121 ILE 121 147 147 ILE ILE A . n A 1 122 CYS 122 148 148 CYS CYS A . n A 1 123 ALA 123 149 149 ALA ALA A . n A 1 124 ASN 124 150 150 ASN ASN A . n A 1 125 TYR 125 151 151 TYR TYR A . n A 1 126 GLY 126 152 152 GLY GLY A . n A 1 127 LYS 127 153 153 LYS LYS A . n B 2 1 ALA 1 26 26 ALA ALA B . n B 2 2 ALA 2 27 27 ALA ALA B . n B 2 3 VAL 3 28 28 VAL VAL B . n B 2 4 LYS 4 29 29 LYS LYS B . n B 2 5 LEU 5 30 30 LEU LEU B . n B 2 6 ALA 6 31 31 ALA ALA B . n B 2 7 PRO 7 32 32 PRO PRO B . n B 2 8 PRO 8 33 33 PRO PRO B . n B 2 9 THR 9 34 34 THR THR B . n B 2 10 ASP 10 35 35 ASP ASP B . n B 2 11 VAL 11 36 36 VAL VAL B . n B 2 12 ARG 12 37 37 ARG ARG B . n B 2 13 SER 13 38 38 SER SER B . n B 2 14 GLY 14 39 39 GLY GLY B . n B 2 15 TYR 15 40 40 TYR TYR B . n B 2 16 ILE 16 41 41 ILE ILE B . n B 2 17 ARG 17 42 42 ARG ARG B . n B 2 18 LEU 18 43 43 LEU LEU B . n B 2 19 VAL 19 44 44 VAL VAL B . n B 2 20 LYS 20 45 45 LYS LYS B . n B 2 21 ASN 21 46 46 ASN ASN B . n B 2 22 VAL 22 47 47 VAL VAL B . n B 2 23 ASN 23 48 48 ASN ASN B . n B 2 24 TYR 24 49 49 TYR TYR B . n B 2 25 TYR 25 50 50 TYR TYR B . n B 2 26 ILE 26 51 51 ILE ILE B . n B 2 27 ASP 27 52 52 ASP ASP B . n B 2 28 SER 28 53 53 SER SER B . n B 2 29 GLU 29 54 54 GLU GLU B . n B 2 30 SER 30 55 55 SER SER B . n B 2 31 ILE 31 56 56 ILE ILE B . n B 2 32 TRP 32 57 57 TRP TRP B . n B 2 33 VAL 33 58 58 VAL VAL B . n B 2 34 ASP 34 59 59 ASP ASP B . n B 2 35 ASN 35 60 60 ASN ASN B . n B 2 36 GLN 36 61 61 GLN GLN B . n B 2 37 GLU 37 62 62 GLU GLU B . n B 2 38 PRO 38 63 63 PRO PRO B . n B 2 39 GLN 39 64 64 GLN GLN B . n B 2 40 ILE 40 65 65 ILE ILE B . n B 2 41 VAL 41 66 66 VAL VAL B . n B 2 42 HIS 42 67 67 HIS HIS B . n B 2 43 PHE 43 68 68 PHE PHE B . n B 2 44 ASP 44 69 69 ASP ASP B . n B 2 45 ALA 45 70 70 ALA ALA B . n B 2 46 VAL 46 71 71 VAL VAL B . n B 2 47 VAL 47 72 72 VAL VAL B . n B 2 48 ASN 48 73 73 ASN ASN B . n B 2 49 LEU 49 74 74 LEU LEU B . n B 2 50 ASP 50 75 75 ASP ASP B . n B 2 51 LYS 51 76 76 LYS LYS B . n B 2 52 GLY 52 77 77 GLY GLY B . n B 2 53 LEU 53 78 78 LEU LEU B . n B 2 54 TYR 54 79 79 TYR TYR B . n B 2 55 VAL 55 80 80 VAL VAL B . n B 2 56 TYR 56 81 81 TYR TYR B . n B 2 57 PRO 57 82 82 PRO PRO B . n B 2 58 GLU 58 83 83 GLU GLU B . n B 2 59 PRO 59 84 84 PRO PRO B . n B 2 60 LYS 60 85 85 LYS LYS B . n B 2 61 ARG 61 86 86 ARG ARG B . n B 2 62 TYR 62 87 87 TYR TYR B . n B 2 63 ALA 63 88 88 ALA ALA B . n B 2 64 ARG 64 89 89 ARG ARG B . n B 2 65 SER 65 90 90 SER SER B . n B 2 66 VAL 66 91 91 VAL VAL B . n B 2 67 ARG 67 92 92 ARG ARG B . n B 2 68 GLN 68 93 93 GLN GLN B . n B 2 69 TYR 69 94 94 TYR TYR B . n B 2 70 LYS 70 95 95 LYS LYS B . n B 2 71 ILE 71 96 96 ILE ILE B . n B 2 72 LEU 72 97 97 LEU LEU B . n B 2 73 ASN 73 98 98 ASN ASN B . n B 2 74 CYS 74 99 99 CYS CYS B . n B 2 75 ALA 75 100 100 ALA ALA B . n B 2 76 ASN 76 101 101 ASN ASN B . n B 2 77 TYR 77 102 102 TYR TYR B . n B 2 78 HIS 78 103 103 HIS HIS B . n B 2 79 LEU 79 104 104 LEU LEU B . n B 2 80 THR 80 105 105 THR THR B . n B 2 81 GLN 81 106 106 GLN GLN B . n B 2 82 VAL 82 107 107 VAL VAL B . n B 2 83 ARG 83 108 108 ARG ARG B . n B 2 84 THR 84 109 109 THR THR B . n B 2 85 ASP 85 110 110 ASP ASP B . n B 2 86 PHE 86 111 111 PHE PHE B . n B 2 87 TYR 87 112 112 TYR TYR B . n B 2 88 ASP 88 113 113 ASP ASP B . n B 2 89 GLU 89 114 114 GLU GLU B . n B 2 90 PHE 90 115 115 PHE PHE B . n B 2 91 TRP 91 116 116 TRP TRP B . n B 2 92 GLY 92 117 117 GLY GLY B . n B 2 93 GLN 93 118 118 GLN GLN B . n B 2 94 GLY 94 119 119 GLY GLY B . n B 2 95 LEU 95 120 120 LEU LEU B . n B 2 96 ARG 96 121 121 ARG ARG B . n B 2 97 ALA 97 122 122 ALA ALA B . n B 2 98 ALA 98 123 123 ALA ALA B . n B 2 99 PRO 99 124 124 PRO PRO B . n B 2 100 LYS 100 125 125 LYS LYS B . n B 2 101 LYS 101 126 126 LYS LYS B . n B 2 102 GLN 102 127 127 GLN GLN B . n B 2 103 LYS 103 128 128 LYS LYS B . n B 2 104 LYS 104 129 129 LYS LYS B . n B 2 105 HIS 105 130 130 HIS HIS B . n B 2 106 THR 106 131 131 THR THR B . n B 2 107 LEU 107 132 132 LEU LEU B . n B 2 108 SER 108 133 133 SER SER B . n B 2 109 LEU 109 134 134 LEU LEU B . n B 2 110 THR 110 135 135 THR THR B . n B 2 111 PRO 111 136 136 PRO PRO B . n B 2 112 ASP 112 137 137 ASP ASP B . n B 2 113 THR 113 138 138 THR THR B . n B 2 114 THR 114 139 139 THR THR B . n B 2 115 LEU 115 140 140 LEU LEU B . n B 2 116 TYR 116 141 141 TYR TYR B . n B 2 117 ASN 117 142 142 ASN ASN B . n B 2 118 ALA 118 143 143 ALA ALA B . n B 2 119 ALA 119 144 144 ALA ALA B . n B 2 120 GLN 120 145 145 GLN GLN B . n B 2 121 ILE 121 146 146 ILE ILE B . n B 2 122 ILE 122 147 147 ILE ILE B . n B 2 123 CYS 123 148 148 CYS CYS B . n B 2 124 ALA 124 149 149 ALA ALA B . n B 2 125 ASN 125 150 150 ASN ASN B . n B 2 126 TYR 126 151 151 TYR TYR B . n B 2 127 GLY 127 152 152 GLY GLY B . n B 2 128 GLU 128 153 153 GLU GLU B . n B 2 129 ALA 129 154 154 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO 1 1154 1154 EDO EDO A . D 3 EDO 1 1155 1155 EDO EDO B . E 4 HOH 1 2001 2001 HOH HOH A . E 4 HOH 2 2002 2002 HOH HOH A . E 4 HOH 3 2003 2003 HOH HOH A . E 4 HOH 4 2004 2004 HOH HOH A . E 4 HOH 5 2005 2005 HOH HOH A . E 4 HOH 6 2006 2006 HOH HOH A . E 4 HOH 7 2007 2007 HOH HOH A . E 4 HOH 8 2008 2008 HOH HOH A . E 4 HOH 9 2009 2009 HOH HOH A . E 4 HOH 10 2010 2010 HOH HOH A . E 4 HOH 11 2011 2011 HOH HOH A . E 4 HOH 12 2012 2012 HOH HOH A . E 4 HOH 13 2013 2013 HOH HOH A . E 4 HOH 14 2014 2014 HOH HOH A . E 4 HOH 15 2015 2015 HOH HOH A . E 4 HOH 16 2016 2016 HOH HOH A . E 4 HOH 17 2017 2017 HOH HOH A . E 4 HOH 18 2018 2018 HOH HOH A . E 4 HOH 19 2019 2019 HOH HOH A . E 4 HOH 20 2020 2020 HOH HOH A . E 4 HOH 21 2021 2021 HOH HOH A . E 4 HOH 22 2022 2022 HOH HOH A . E 4 HOH 23 2023 2023 HOH HOH A . E 4 HOH 24 2024 2024 HOH HOH A . E 4 HOH 25 2025 2025 HOH HOH A . F 4 HOH 1 2001 2001 HOH HOH B . F 4 HOH 2 2002 2002 HOH HOH B . F 4 HOH 3 2003 2003 HOH HOH B . F 4 HOH 4 2004 2004 HOH HOH B . F 4 HOH 5 2005 2005 HOH HOH B . F 4 HOH 6 2006 2006 HOH HOH B . F 4 HOH 7 2007 2007 HOH HOH B . F 4 HOH 8 2008 2008 HOH HOH B . F 4 HOH 9 2009 2009 HOH HOH B . F 4 HOH 10 2010 2010 HOH HOH B . F 4 HOH 11 2011 2011 HOH HOH B . F 4 HOH 12 2012 2012 HOH HOH B . F 4 HOH 13 2013 2013 HOH HOH B . F 4 HOH 14 2014 2014 HOH HOH B . F 4 HOH 15 2015 2015 HOH HOH B . F 4 HOH 16 2016 2016 HOH HOH B . F 4 HOH 17 2017 2017 HOH HOH B . F 4 HOH 18 2018 2018 HOH HOH B . F 4 HOH 19 2019 2019 HOH HOH B . F 4 HOH 20 2020 2020 HOH HOH B . F 4 HOH 21 2021 2021 HOH HOH B . F 4 HOH 22 2022 2022 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA monomeric 1 2 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-04-17 2 'Structure model' 1 1 2013-06-05 3 'Structure model' 2 0 2018-01-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' Other 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' diffrn_source # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -8.0862 -2.5000 6.0850 0.3503 0.3159 0.4482 -0.0348 -0.0424 0.1520 6.4104 3.4241 4.0684 0.3997 2.2420 1.3740 -0.1280 0.3259 0.5174 -0.1143 0.0095 0.7633 -0.2407 -0.5885 0.1133 'X-RAY DIFFRACTION' 2 ? refined -10.6743 -10.5562 13.3913 0.2595 0.2639 0.3581 -0.0038 -0.0179 0.0615 8.4737 2.4050 2.9266 0.8619 -2.2695 -0.9597 -0.0624 -0.1362 -0.0784 0.2436 0.2194 0.5566 0.0446 -0.4380 -0.1214 'X-RAY DIFFRACTION' 3 ? refined 0.7354 -8.7562 -0.1201 0.3298 0.2866 0.2780 -0.0321 -0.0600 -0.0212 2.1808 7.3301 6.8381 -2.6705 2.9374 -0.0059 -0.0981 0.3168 -0.0061 -1.2289 0.0870 0.2126 -0.0553 -0.0907 -0.0689 'X-RAY DIFFRACTION' 4 ? refined 8.0471 -17.0547 31.8447 0.2297 0.2616 0.3733 0.0221 -0.0661 0.0038 3.4360 3.0452 7.5673 -0.1048 0.8441 1.0919 -0.1015 -0.6313 0.2186 0.4424 -0.0107 -0.1069 0.2000 0.1806 -0.0767 'X-RAY DIFFRACTION' 5 ? refined 0.1021 -6.7023 35.9192 0.3507 0.4512 0.3040 0.0838 0.0696 -0.1044 3.9899 4.1392 3.5261 -1.1885 -1.7404 1.0694 -0.0991 -0.9710 0.3576 0.5454 0.0644 0.2654 -0.4062 -0.3155 0.0146 'X-RAY DIFFRACTION' 6 ? refined 4.1978 -8.6807 26.2139 0.2831 0.2568 0.2837 0.0182 -0.0727 -0.0294 3.3384 2.7394 6.5521 0.1216 -2.2712 -0.4436 0.0317 -0.1472 0.3235 0.0480 -0.0445 0.3156 -0.7537 -0.2370 0.0069 'X-RAY DIFFRACTION' 7 ? refined 17.7708 -16.6022 24.4148 0.3415 0.3673 0.3846 0.0282 -0.1447 0.0471 8.9152 1.8230 7.6046 2.9723 0.3329 0.3564 -0.2651 0.3155 0.0592 0.0541 0.4139 -0.0234 0.3358 1.0141 -0.3197 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 27:64)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 65:129)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 130:153)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 26:64)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 65:89)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 90:133)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? 'CHAIN B AND (RESSEQ 134:156)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ2 A LYS 129 ? ? O A HOH 2020 ? ? 1.30 2 1 HG1 A THR 138 ? ? O A HOH 2022 ? ? 1.56 3 1 O A HOH 2007 ? ? O B HOH 2017 ? ? 1.91 4 1 O B HOH 2005 ? ? O B HOH 2007 ? ? 1.91 5 1 NZ A LYS 45 ? ? O A THR 138 ? ? 1.95 6 1 O B ALA 154 ? ? O B HOH 2022 ? ? 2.02 7 1 OG1 A THR 138 ? ? O A HOH 2022 ? ? 2.07 8 1 NZ A LYS 129 ? ? O A HOH 2020 ? ? 2.13 9 1 O B HOH 2003 ? ? O B HOH 2007 ? ? 2.15 10 1 OH B TYR 102 ? ? NE2 B GLN 145 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 HZ2 B LYS 128 ? ? 1_555 HG3 B GLN 145 ? ? 2_656 1.13 2 1 NH2 A ARG 89 ? ? 1_555 OG B SER 38 ? ? 2_556 1.99 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 LYS _pdbx_validate_rmsd_bond.auth_seq_id_1 128 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 NZ _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 LYS _pdbx_validate_rmsd_bond.auth_seq_id_2 128 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.321 _pdbx_validate_rmsd_bond.bond_target_value 1.486 _pdbx_validate_rmsd_bond.bond_deviation -0.165 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.025 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CD _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 LYS _pdbx_validate_rmsd_angle.auth_seq_id_1 128 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CE _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 LYS _pdbx_validate_rmsd_angle.auth_seq_id_2 128 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NZ _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 LYS _pdbx_validate_rmsd_angle.auth_seq_id_3 128 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 90.39 _pdbx_validate_rmsd_angle.angle_target_value 111.70 _pdbx_validate_rmsd_angle.angle_deviation -21.31 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 29 ? ? -174.61 65.08 2 1 TYR B 151 ? ? -127.46 -57.00 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 1,2-ETHANEDIOL EDO 4 water HOH #