data_3ZJ2 # _entry.id 3ZJ2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3ZJ2 PDBE EBI-55434 WWPDB D_1290055434 BMRB 18956 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3ZJ1 unspecified 'STRUCTURE OF NAB2P TANDEM ZINC FINGER 12' BMRB 18956 unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZJ2 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-01-16 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Martinez-Lumbreras, S.' 1 'Santiveri, C.M.' 2 'Mirassou, Y.' 3 'Zorrilla, S.' 4 'Perez-Canadillas, J.M.' 5 # _citation.id primary _citation.title 'Two Singular Types of Ccch Tandem Zinc Finger in Nab2P Contribute to Polyadenosine RNA Recognition.' _citation.journal_abbrev Structure _citation.journal_volume 21 _citation.page_first 1800 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23994011 _citation.pdbx_database_id_DOI 10.1016/J.STR.2013.07.019 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Martinez-Lumbreras, S.' 1 primary 'Santiveri, C.M.' 2 primary 'Mirassou, Y.' 3 primary 'Zorrilla, S.' 4 primary 'Perez-Canadillas, J.M.' 5 # _cell.entry_id 3ZJ2 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZJ2 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB2' 7698.917 1 ? ? 'ZINC FINGERS 3 AND 4, RESIDUES 333-401' ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name NAB2P # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSVQTGIVLCKFGALCSNPSCPFGHPTPANEDAKVIDLMWCDKNLTCDNPECRKAHSSLSKIKEVKPISQK _entity_poly.pdbx_seq_one_letter_code_can GSVQTGIVLCKFGALCSNPSCPFGHPTPANEDAKVIDLMWCDKNLTCDNPECRKAHSSLSKIKEVKPISQK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 VAL n 1 4 GLN n 1 5 THR n 1 6 GLY n 1 7 ILE n 1 8 VAL n 1 9 LEU n 1 10 CYS n 1 11 LYS n 1 12 PHE n 1 13 GLY n 1 14 ALA n 1 15 LEU n 1 16 CYS n 1 17 SER n 1 18 ASN n 1 19 PRO n 1 20 SER n 1 21 CYS n 1 22 PRO n 1 23 PHE n 1 24 GLY n 1 25 HIS n 1 26 PRO n 1 27 THR n 1 28 PRO n 1 29 ALA n 1 30 ASN n 1 31 GLU n 1 32 ASP n 1 33 ALA n 1 34 LYS n 1 35 VAL n 1 36 ILE n 1 37 ASP n 1 38 LEU n 1 39 MET n 1 40 TRP n 1 41 CYS n 1 42 ASP n 1 43 LYS n 1 44 ASN n 1 45 LEU n 1 46 THR n 1 47 CYS n 1 48 ASP n 1 49 ASN n 1 50 PRO n 1 51 GLU n 1 52 CYS n 1 53 ARG n 1 54 LYS n 1 55 ALA n 1 56 HIS n 1 57 SER n 1 58 SER n 1 59 LEU n 1 60 SER n 1 61 LYS n 1 62 ILE n 1 63 LYS n 1 64 GLU n 1 65 VAL n 1 66 LYS n 1 67 PRO n 1 68 ILE n 1 69 SER n 1 70 GLN n 1 71 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;BAKER'S YEAST ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SACCHAROMYCES CEREVISIAE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET28 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NAB2_YEAST _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P32505 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ZJ2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 71 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P32505 _struct_ref_seq.db_align_beg 333 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 401 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 333 _struct_ref_seq.pdbx_auth_seq_align_end 401 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3ZJ2 GLY A 1 ? UNP P32505 ? ? 'expression tag' 331 1 1 3ZJ2 SER A 2 ? UNP P32505 ? ? 'expression tag' 332 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '1H-15N HSQC' 1 2 1 '1H-15N HMBC' 1 3 1 '1H-13C HSQC' 1 4 1 HNCO 1 5 1 'HN(CA) CO' 1 6 1 HNCA 1 7 1 HNCACB 1 8 1 'CBCA(CO) HN' 1 9 1 'H(C)CH- TOCSY' 1 10 1 '(H)CCH- TOCSY' 1 11 1 '(HB) CB(CGCD) HD ARO' 1 12 1 '(HB)CB(CGCDCE)HE ARO' 1 13 1 '15N HSQC-NOESY' 1 14 1 'NOESY AND TOCSY' 1 15 1 '(H)CCH-TOCSY' 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298.0 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1.0 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 25 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '90% H2O/10% D2O, 100% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength 1 Avance Bruker 600 2 Avance Bruker 800 # _pdbx_nmr_refine.entry_id 3ZJ2 _pdbx_nmr_refine.method 'CYANA, AMBER' _pdbx_nmr_refine.details 'REFINEMENT PROTOCOL AS DESCRIBED IN THE PRIMARY CITATION' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 3ZJ2 _pdbx_nmr_details.text NONE # _pdbx_nmr_ensemble.entry_id 3ZJ2 _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST TARGET FUNCTION' # _pdbx_nmr_representative.entry_id 3ZJ2 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement AMBER 7.0 'CASE, D.A. ET AL' 1 'structure solution' NMRPIPE ? ? 2 'structure solution' ANALYSIS ? ? 3 'structure solution' CYANA ? ? 4 'structure solution' AMBER ? ? 5 # _exptl.entry_id 3ZJ2 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 3ZJ2 _struct.title 'Structure of Nab2p tandem zinc finger 34' _struct.pdbx_descriptor 'NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN NAB2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZJ2 _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text 'RNA BINDING PROTEIN, CCCH-TYPE ZINC FINGER, MRNA EXPORT, POLY(A) LENGTH CONTROL, POLYADENOSINE RNA BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 12 ? CYS A 16 ? PHE A 342 CYS A 346 5 ? 5 HELX_P HELX_P2 2 LYS A 43 ? CYS A 47 ? LYS A 373 CYS A 377 5 ? 5 HELX_P HELX_P3 3 LEU A 59 ? GLU A 64 ? LEU A 389 GLU A 394 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 25 NE2 ? ? A ZN 501 A HIS 355 1_555 ? ? ? ? ? ? ? 2.335 ? metalc2 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 10 SG ? ? A ZN 501 A CYS 340 1_555 ? ? ? ? ? ? ? 2.461 ? metalc3 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 21 SG ? ? A ZN 501 A CYS 351 1_555 ? ? ? ? ? ? ? 2.473 ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 16 SG ? ? A ZN 501 A CYS 346 1_555 ? ? ? ? ? ? ? 2.438 ? metalc5 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 52 SG ? ? A ZN 502 A CYS 382 1_555 ? ? ? ? ? ? ? 2.446 ? metalc6 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 47 SG ? ? A ZN 502 A CYS 377 1_555 ? ? ? ? ? ? ? 2.444 ? metalc7 metalc ? ? C ZN . ZN ? ? ? 1_555 A HIS 56 NE2 ? ? A ZN 502 A HIS 386 1_555 ? ? ? ? ? ? ? 2.378 ? metalc8 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 41 SG ? ? A ZN 502 A CYS 371 1_555 ? ? ? ? ? ? ? 2.403 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 501' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 10 ? CYS A 340 . ? 1_555 ? 2 AC1 4 CYS A 16 ? CYS A 346 . ? 1_555 ? 3 AC1 4 CYS A 21 ? CYS A 351 . ? 1_555 ? 4 AC1 4 HIS A 25 ? HIS A 355 . ? 1_555 ? 5 AC2 4 CYS A 41 ? CYS A 371 . ? 1_555 ? 6 AC2 4 CYS A 47 ? CYS A 377 . ? 1_555 ? 7 AC2 4 CYS A 52 ? CYS A 382 . ? 1_555 ? 8 AC2 4 HIS A 56 ? HIS A 386 . ? 1_555 ? # _database_PDB_matrix.entry_id 3ZJ2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ZJ2 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 331 331 GLY GLY A . n A 1 2 SER 2 332 332 SER SER A . n A 1 3 VAL 3 333 333 VAL VAL A . n A 1 4 GLN 4 334 334 GLN GLN A . n A 1 5 THR 5 335 335 THR THR A . n A 1 6 GLY 6 336 336 GLY GLY A . n A 1 7 ILE 7 337 337 ILE ILE A . n A 1 8 VAL 8 338 338 VAL VAL A . n A 1 9 LEU 9 339 339 LEU LEU A . n A 1 10 CYS 10 340 340 CYS CYS A . n A 1 11 LYS 11 341 341 LYS LYS A . n A 1 12 PHE 12 342 342 PHE PHE A . n A 1 13 GLY 13 343 343 GLY GLY A . n A 1 14 ALA 14 344 344 ALA ALA A . n A 1 15 LEU 15 345 345 LEU LEU A . n A 1 16 CYS 16 346 346 CYS CYS A . n A 1 17 SER 17 347 347 SER SER A . n A 1 18 ASN 18 348 348 ASN ASN A . n A 1 19 PRO 19 349 349 PRO PRO A . n A 1 20 SER 20 350 350 SER SER A . n A 1 21 CYS 21 351 351 CYS CYS A . n A 1 22 PRO 22 352 352 PRO PRO A . n A 1 23 PHE 23 353 353 PHE PHE A . n A 1 24 GLY 24 354 354 GLY GLY A . n A 1 25 HIS 25 355 355 HIS HIS A . n A 1 26 PRO 26 356 356 PRO PRO A . n A 1 27 THR 27 357 357 THR THR A . n A 1 28 PRO 28 358 358 PRO PRO A . n A 1 29 ALA 29 359 359 ALA ALA A . n A 1 30 ASN 30 360 360 ASN ASN A . n A 1 31 GLU 31 361 361 GLU GLU A . n A 1 32 ASP 32 362 362 ASP ASP A . n A 1 33 ALA 33 363 363 ALA ALA A . n A 1 34 LYS 34 364 364 LYS LYS A . n A 1 35 VAL 35 365 365 VAL VAL A . n A 1 36 ILE 36 366 366 ILE ILE A . n A 1 37 ASP 37 367 367 ASP ASP A . n A 1 38 LEU 38 368 368 LEU LEU A . n A 1 39 MET 39 369 369 MET MET A . n A 1 40 TRP 40 370 370 TRP TRP A . n A 1 41 CYS 41 371 371 CYS CYS A . n A 1 42 ASP 42 372 372 ASP ASP A . n A 1 43 LYS 43 373 373 LYS LYS A . n A 1 44 ASN 44 374 374 ASN ASN A . n A 1 45 LEU 45 375 375 LEU LEU A . n A 1 46 THR 46 376 376 THR THR A . n A 1 47 CYS 47 377 377 CYS CYS A . n A 1 48 ASP 48 378 378 ASP ASP A . n A 1 49 ASN 49 379 379 ASN ASN A . n A 1 50 PRO 50 380 380 PRO PRO A . n A 1 51 GLU 51 381 381 GLU GLU A . n A 1 52 CYS 52 382 382 CYS CYS A . n A 1 53 ARG 53 383 383 ARG ARG A . n A 1 54 LYS 54 384 384 LYS LYS A . n A 1 55 ALA 55 385 385 ALA ALA A . n A 1 56 HIS 56 386 386 HIS HIS A . n A 1 57 SER 57 387 387 SER SER A . n A 1 58 SER 58 388 388 SER SER A . n A 1 59 LEU 59 389 389 LEU LEU A . n A 1 60 SER 60 390 390 SER SER A . n A 1 61 LYS 61 391 391 LYS LYS A . n A 1 62 ILE 62 392 392 ILE ILE A . n A 1 63 LYS 63 393 393 LYS LYS A . n A 1 64 GLU 64 394 394 GLU GLU A . n A 1 65 VAL 65 395 395 VAL VAL A . n A 1 66 LYS 66 396 396 LYS LYS A . n A 1 67 PRO 67 397 397 PRO PRO A . n A 1 68 ILE 68 398 398 ILE ILE A . n A 1 69 SER 69 399 399 SER SER A . n A 1 70 GLN 70 400 400 GLN GLN A . n A 1 71 LYS 71 401 401 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 501 501 ZN ZN A . C 2 ZN 1 502 502 ZN ZN A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 25 ? A HIS 355 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 10 ? A CYS 340 ? 1_555 103.8 ? 2 NE2 ? A HIS 25 ? A HIS 355 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 21 ? A CYS 351 ? 1_555 101.6 ? 3 SG ? A CYS 10 ? A CYS 340 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 21 ? A CYS 351 ? 1_555 115.4 ? 4 NE2 ? A HIS 25 ? A HIS 355 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 16 ? A CYS 346 ? 1_555 105.4 ? 5 SG ? A CYS 10 ? A CYS 340 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 16 ? A CYS 346 ? 1_555 111.7 ? 6 SG ? A CYS 21 ? A CYS 351 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 SG ? A CYS 16 ? A CYS 346 ? 1_555 116.8 ? 7 SG ? A CYS 52 ? A CYS 382 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 47 ? A CYS 377 ? 1_555 113.4 ? 8 SG ? A CYS 52 ? A CYS 382 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 56 ? A HIS 386 ? 1_555 103.7 ? 9 SG ? A CYS 47 ? A CYS 377 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 56 ? A HIS 386 ? 1_555 113.3 ? 10 SG ? A CYS 52 ? A CYS 382 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 41 ? A CYS 371 ? 1_555 110.5 ? 11 SG ? A CYS 47 ? A CYS 377 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 41 ? A CYS 371 ? 1_555 112.4 ? 12 NE2 ? A HIS 56 ? A HIS 386 ? 1_555 ZN ? C ZN . ? A ZN 502 ? 1_555 SG ? A CYS 41 ? A CYS 371 ? 1_555 102.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-11 2 'Structure model' 1 1 2013-10-30 3 'Structure model' 1 2 2014-07-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Structure summary' # _pdbx_entry_details.entry_id 3ZJ2 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE TWO N-TERMINAL RESIDUES (GS) ARE NOT FROM WILD TYPE SEQUENCE ; # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 3 NE A ARG 383 ? ? CZ A ARG 383 ? ? NH1 A ARG 383 ? ? 123.44 120.30 3.14 0.50 N 2 7 NE A ARG 383 ? ? CZ A ARG 383 ? ? NH1 A ARG 383 ? ? 123.39 120.30 3.09 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 334 ? ? -79.55 25.12 2 1 ASN A 360 ? ? -171.34 115.02 3 1 ASN A 374 ? ? 40.99 -112.29 4 1 ARG A 383 ? ? -143.90 32.04 5 1 SER A 387 ? ? -68.86 -178.37 6 1 GLU A 394 ? ? -170.86 86.94 7 1 VAL A 395 ? ? -75.70 20.93 8 1 SER A 399 ? ? 73.95 -39.14 9 2 ASN A 360 ? ? -166.44 111.39 10 2 LEU A 368 ? ? -100.04 68.12 11 2 ASN A 374 ? ? 51.49 -121.68 12 2 ARG A 383 ? ? -146.59 43.12 13 2 GLU A 394 ? ? -169.02 89.15 14 3 ASN A 360 ? ? -164.23 98.88 15 3 LEU A 368 ? ? -93.99 49.84 16 3 ASN A 374 ? ? 47.57 -112.27 17 3 ARG A 383 ? ? -146.17 50.71 18 3 LYS A 393 ? ? -83.85 -71.83 19 3 GLU A 394 ? ? -161.14 21.20 20 3 ILE A 398 ? ? 58.40 19.76 21 3 GLN A 400 ? ? 64.55 152.27 22 4 ASN A 360 ? ? -167.55 110.71 23 4 LEU A 368 ? ? -107.51 58.55 24 4 ASN A 374 ? ? 44.38 -109.41 25 4 ARG A 383 ? ? -141.69 35.47 26 4 GLU A 394 ? ? -155.74 71.56 27 4 LYS A 396 ? ? 69.29 129.94 28 5 GLN A 334 ? ? -146.80 23.39 29 5 ASN A 360 ? ? -172.83 117.55 30 5 LEU A 368 ? ? -100.70 70.75 31 5 ASN A 374 ? ? 48.26 -117.96 32 5 GLU A 394 ? ? -155.62 42.83 33 6 SER A 332 ? ? -164.08 -169.57 34 6 ASN A 360 ? ? -169.48 115.46 35 6 LEU A 368 ? ? -107.57 47.29 36 6 ASN A 374 ? ? 50.71 -118.95 37 6 ARG A 383 ? ? -141.69 33.49 38 6 GLU A 394 ? ? -169.29 87.26 39 7 LYS A 341 ? ? 57.90 -19.15 40 7 ASN A 360 ? ? -165.98 108.70 41 7 ASN A 374 ? ? 49.33 -112.93 42 7 ARG A 383 ? ? -147.66 41.91 43 7 LYS A 393 ? ? -90.10 -60.58 44 7 GLU A 394 ? ? -169.64 75.73 45 8 VAL A 333 ? ? -145.67 18.30 46 8 ASN A 360 ? ? -167.09 103.95 47 8 LEU A 368 ? ? -101.11 71.48 48 8 ASN A 374 ? ? 51.72 -118.51 49 8 ARG A 383 ? ? -150.01 38.96 50 8 LYS A 396 ? ? 39.62 64.90 51 9 THR A 335 ? ? -159.11 24.32 52 9 ASN A 360 ? ? -165.27 99.22 53 9 LEU A 368 ? ? -110.71 60.24 54 9 ASN A 374 ? ? 50.39 -116.92 55 9 ARG A 383 ? ? -149.58 34.83 56 9 GLU A 394 ? ? -173.00 78.18 57 9 GLN A 400 ? ? 71.28 -29.70 58 10 SER A 332 ? ? -169.94 -87.19 59 10 THR A 335 ? ? -160.92 5.26 60 10 ASN A 360 ? ? -166.75 110.55 61 10 LEU A 368 ? ? -100.91 54.87 62 10 ASN A 374 ? ? 46.43 -115.44 63 10 ARG A 383 ? ? -151.21 32.59 64 10 LYS A 393 ? ? -83.67 -73.77 65 10 GLU A 394 ? ? -165.81 22.16 66 10 SER A 399 ? ? 70.42 -50.93 67 11 SER A 332 ? ? -149.16 24.45 68 11 VAL A 333 ? ? 59.79 170.10 69 11 GLN A 334 ? ? -143.55 16.15 70 11 ASN A 360 ? ? -163.37 101.63 71 11 LEU A 368 ? ? -104.82 63.61 72 11 ASN A 374 ? ? 49.74 -102.17 73 11 ARG A 383 ? ? -150.08 42.76 74 11 GLU A 394 ? ? -164.45 11.55 75 11 VAL A 395 ? ? 56.35 12.60 76 11 LYS A 396 ? ? -168.78 85.78 77 11 ILE A 398 ? ? -76.47 34.12 78 11 SER A 399 ? ? -150.60 20.15 79 12 ASN A 360 ? ? -164.71 110.20 80 12 LEU A 368 ? ? -90.95 40.68 81 12 ASN A 374 ? ? 45.58 -108.09 82 12 ARG A 383 ? ? -146.98 46.60 83 12 GLU A 394 ? ? -167.83 74.90 84 12 SER A 399 ? ? 65.67 -21.60 85 13 VAL A 333 ? ? -150.33 -57.68 86 13 GLN A 334 ? ? 67.04 172.92 87 13 THR A 335 ? ? -153.90 -12.02 88 13 ASN A 360 ? ? -169.10 106.42 89 13 ASN A 374 ? ? 54.65 -111.11 90 13 ARG A 383 ? ? -146.25 41.53 91 13 LYS A 393 ? ? -87.00 -112.01 92 13 GLU A 394 ? ? -169.78 69.90 93 13 GLN A 400 ? ? 69.90 -24.84 94 14 VAL A 333 ? ? -175.29 111.02 95 14 LYS A 341 ? ? 70.03 -39.36 96 14 ASN A 360 ? ? -167.09 103.70 97 14 LEU A 368 ? ? -100.20 63.69 98 14 ASN A 374 ? ? 52.69 -110.82 99 14 ARG A 383 ? ? -145.96 45.71 100 14 GLU A 394 ? ? -155.65 20.93 101 14 VAL A 395 ? ? 53.62 114.83 102 15 SER A 332 ? ? 64.28 -47.97 103 15 ASN A 360 ? ? -166.33 105.95 104 15 LEU A 368 ? ? -102.09 68.92 105 15 ASN A 374 ? ? 44.79 -113.07 106 15 ARG A 383 ? ? -149.09 35.83 107 15 GLU A 394 ? ? -155.59 59.48 108 15 LYS A 396 ? ? -172.98 120.45 109 15 SER A 399 ? ? -165.32 39.27 110 16 ASN A 360 ? ? -167.29 105.16 111 16 LEU A 368 ? ? -104.40 68.50 112 16 ASN A 374 ? ? 50.16 -111.79 113 16 ARG A 383 ? ? -146.68 42.05 114 16 GLU A 394 ? ? -175.33 100.70 115 16 LYS A 396 ? ? 55.41 73.84 116 16 SER A 399 ? ? -169.66 -38.36 117 17 GLN A 334 ? ? 76.39 135.96 118 17 ASN A 360 ? ? -165.94 90.38 119 17 LEU A 368 ? ? -104.61 50.48 120 17 ASN A 374 ? ? 51.67 -120.79 121 17 ARG A 383 ? ? -150.04 42.32 122 17 GLU A 394 ? ? -169.30 88.36 123 17 GLN A 400 ? ? 72.58 -20.11 124 18 THR A 335 ? ? -154.11 19.63 125 18 ASN A 360 ? ? -167.29 102.71 126 18 ASN A 374 ? ? 54.38 -121.42 127 18 ARG A 383 ? ? -144.38 44.19 128 18 GLU A 394 ? ? -153.32 68.14 129 19 SER A 332 ? ? 65.12 -169.75 130 19 ASN A 360 ? ? -168.83 107.33 131 19 LEU A 368 ? ? -104.09 56.13 132 19 ASN A 374 ? ? 50.72 -120.16 133 19 GLU A 394 ? ? -172.06 93.75 134 19 VAL A 395 ? ? -104.50 -143.28 135 19 SER A 399 ? ? 73.41 -13.17 136 19 GLN A 400 ? ? 67.96 178.40 137 20 ASN A 360 ? ? -168.43 108.36 138 20 ASN A 374 ? ? 45.77 -107.84 139 20 CYS A 377 ? ? -59.23 109.20 140 20 GLU A 394 ? ? -155.11 83.38 141 20 SER A 399 ? ? -163.99 -39.44 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 3 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 383 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.100 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #