data_3ZJP # _entry.id 3ZJP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ZJP pdb_00003zjp 10.2210/pdb3zjp/pdb PDBE EBI-55484 ? ? WWPDB D_1290055484 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3ZJH unspecified 'TRP(60)B9ALA MUTATION OF M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH CYANIDE' PDB 3ZJI unspecified 'TYR(61)B10ALA MUTATION OF M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH CYANIDE' PDB 3ZJJ unspecified 'PHE(93)E11LEU MUTATION OF M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH CYANIDE' PDB 3ZJL unspecified 'LEU(142)G4ALA MUTATION OF M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH CYANIDE' PDB 3ZJM unspecified 'ILE(149)G11PHE MUTATION OF M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH CYANIDE' PDB 3ZJN unspecified 'M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH CYANIDE' PDB 3ZJO unspecified 'M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH AZIDE' PDB 3ZJQ unspecified 'M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH NICOTINAMIDE' PDB 3ZJR unspecified 'M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH CYANIDE AND XENON' PDB 3ZJS unspecified 'M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH AZIDE AND XENON' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZJP _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-01-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pesce, A.' 1 'Tilleman, L.' 2 'Donne, J.' 3 'Aste, E.' 4 'Ascenzi, P.' 5 'Ciaccio, C.' 6 'Coletta, M.' 7 'Moens, L.' 8 'Viappiani, C.' 9 'Dewilde, S.' 10 'Bolognesi, M.' 11 'Nardini, M.' 12 # _citation.id primary _citation.title 'Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 8 _citation.page_first 66144 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23776624 _citation.pdbx_database_id_DOI 10.1371/JOURNAL.PONE.0066144 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pesce, A.' 1 ? primary 'Tilleman, L.' 2 ? primary 'Donne, J.' 3 ? primary 'Aste, E.' 4 ? primary 'Ascenzi, P.' 5 ? primary 'Ciaccio, C.' 6 ? primary 'Coletta, M.' 7 ? primary 'Moens, L.' 8 ? primary 'Viappiani, C.' 9 ? primary 'Dewilde, S.' 10 ? primary 'Bolognesi, M.' 11 ? primary 'Nardini, M.' 12 ? # _cell.entry_id 3ZJP _cell.length_a 79.970 _cell.length_b 49.060 _cell.length_c 51.430 _cell.angle_alpha 90.00 _cell.angle_beta 92.48 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZJP _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man PROTOGLOBIN 23010.863 1 ? YES ? ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 5 ? ? ? ? 5 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 6 water nat water 18.015 252 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSVEKIPGYTYGETENRAPFNLEDLKLLKEAVMFTAEDEEYIQKAGEVLEDQVEEILDTWYGFVGSHPHLLYYFTSPDGT PNEKYLAAVRKRFSRWILDTSNRSYDQAWLDYQYEIGLRHHRTKKNQTDNVESVPNIGYRYLVAFIYPITATMKPFLARK GHTPEEVEKMYQAWFKATTLQVALWSYPYVKYGDF ; _entity_poly.pdbx_seq_one_letter_code_can ;MSVEKIPGYTYGETENRAPFNLEDLKLLKEAVMFTAEDEEYIQKAGEVLEDQVEEILDTWYGFVGSHPHLLYYFTSPDGT PNEKYLAAVRKRFSRWILDTSNRSYDQAWLDYQYEIGLRHHRTKKNQTDNVESVPNIGYRYLVAFIYPITATMKPFLARK GHTPEEVEKMYQAWFKATTLQVALWSYPYVKYGDF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 VAL n 1 4 GLU n 1 5 LYS n 1 6 ILE n 1 7 PRO n 1 8 GLY n 1 9 TYR n 1 10 THR n 1 11 TYR n 1 12 GLY n 1 13 GLU n 1 14 THR n 1 15 GLU n 1 16 ASN n 1 17 ARG n 1 18 ALA n 1 19 PRO n 1 20 PHE n 1 21 ASN n 1 22 LEU n 1 23 GLU n 1 24 ASP n 1 25 LEU n 1 26 LYS n 1 27 LEU n 1 28 LEU n 1 29 LYS n 1 30 GLU n 1 31 ALA n 1 32 VAL n 1 33 MET n 1 34 PHE n 1 35 THR n 1 36 ALA n 1 37 GLU n 1 38 ASP n 1 39 GLU n 1 40 GLU n 1 41 TYR n 1 42 ILE n 1 43 GLN n 1 44 LYS n 1 45 ALA n 1 46 GLY n 1 47 GLU n 1 48 VAL n 1 49 LEU n 1 50 GLU n 1 51 ASP n 1 52 GLN n 1 53 VAL n 1 54 GLU n 1 55 GLU n 1 56 ILE n 1 57 LEU n 1 58 ASP n 1 59 THR n 1 60 TRP n 1 61 TYR n 1 62 GLY n 1 63 PHE n 1 64 VAL n 1 65 GLY n 1 66 SER n 1 67 HIS n 1 68 PRO n 1 69 HIS n 1 70 LEU n 1 71 LEU n 1 72 TYR n 1 73 TYR n 1 74 PHE n 1 75 THR n 1 76 SER n 1 77 PRO n 1 78 ASP n 1 79 GLY n 1 80 THR n 1 81 PRO n 1 82 ASN n 1 83 GLU n 1 84 LYS n 1 85 TYR n 1 86 LEU n 1 87 ALA n 1 88 ALA n 1 89 VAL n 1 90 ARG n 1 91 LYS n 1 92 ARG n 1 93 PHE n 1 94 SER n 1 95 ARG n 1 96 TRP n 1 97 ILE n 1 98 LEU n 1 99 ASP n 1 100 THR n 1 101 SER n 1 102 ASN n 1 103 ARG n 1 104 SER n 1 105 TYR n 1 106 ASP n 1 107 GLN n 1 108 ALA n 1 109 TRP n 1 110 LEU n 1 111 ASP n 1 112 TYR n 1 113 GLN n 1 114 TYR n 1 115 GLU n 1 116 ILE n 1 117 GLY n 1 118 LEU n 1 119 ARG n 1 120 HIS n 1 121 HIS n 1 122 ARG n 1 123 THR n 1 124 LYS n 1 125 LYS n 1 126 ASN n 1 127 GLN n 1 128 THR n 1 129 ASP n 1 130 ASN n 1 131 VAL n 1 132 GLU n 1 133 SER n 1 134 VAL n 1 135 PRO n 1 136 ASN n 1 137 ILE n 1 138 GLY n 1 139 TYR n 1 140 ARG n 1 141 TYR n 1 142 LEU n 1 143 VAL n 1 144 ALA n 1 145 PHE n 1 146 ILE n 1 147 TYR n 1 148 PRO n 1 149 ILE n 1 150 THR n 1 151 ALA n 1 152 THR n 1 153 MET n 1 154 LYS n 1 155 PRO n 1 156 PHE n 1 157 LEU n 1 158 ALA n 1 159 ARG n 1 160 LYS n 1 161 GLY n 1 162 HIS n 1 163 THR n 1 164 PRO n 1 165 GLU n 1 166 GLU n 1 167 VAL n 1 168 GLU n 1 169 LYS n 1 170 MET n 1 171 TYR n 1 172 GLN n 1 173 ALA n 1 174 TRP n 1 175 PHE n 1 176 LYS n 1 177 ALA n 1 178 THR n 1 179 THR n 1 180 LEU n 1 181 GLN n 1 182 VAL n 1 183 ALA n 1 184 LEU n 1 185 TRP n 1 186 SER n 1 187 TYR n 1 188 PRO n 1 189 TYR n 1 190 VAL n 1 191 LYS n 1 192 TYR n 1 193 GLY n 1 194 ASP n 1 195 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'METHANOSARCINA ACETIVORANS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2214 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8TLY9_METAC _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q8TLY9 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ZJP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 195 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8TLY9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 195 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 195 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3ZJP _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 101 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8TLY9 _struct_ref_seq_dif.db_mon_id CYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 101 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 101 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3ZJP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.84 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.4 M MONOBASIC AMMONIUM PHOSPHATE, 0.01 M POTASSIUM FERRICYANIDE, 0.04 M IMIDAZOLE' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength 1.0 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3ZJP _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 23.41 _reflns.d_resolution_high 1.38 _reflns.number_obs 40771 _reflns.number_all ? _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.10 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.38 _reflns_shell.d_res_low 1.45 _reflns_shell.percent_possible_all 97.8 _reflns_shell.Rmerge_I_obs 0.26 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.40 _reflns_shell.pdbx_redundancy 2.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ZJP _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 38667 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.41 _refine.ls_d_res_high 1.38 _refine.ls_percent_reflns_obs 98.66 _refine.ls_R_factor_obs 0.16116 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15919 _refine.ls_R_factor_R_free 0.19820 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2051 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.B_iso_mean 14.025 _refine.aniso_B[1][1] -0.02 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.02 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2VEB' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.070 _refine.pdbx_overall_ESU_R_Free 0.064 _refine.overall_SU_ML 0.036 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.949 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1600 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 88 _refine_hist.number_atoms_solvent 252 _refine_hist.number_atoms_total 1940 _refine_hist.d_res_high 1.38 _refine_hist.d_res_low 23.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 1800 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.270 2.042 ? 2464 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.050 5.000 ? 207 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.057 23.933 ? 89 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.124 15.000 ? 284 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.229 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.085 0.200 ? 243 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 1394 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.918 1.500 ? 982 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.485 2.000 ? 1605 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.197 3.000 ? 818 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.062 4.500 ? 850 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.175 3.000 ? 1800 'X-RAY DIFFRACTION' ? r_sphericity_free 9.360 3.000 ? 264 'X-RAY DIFFRACTION' ? r_sphericity_bonded 3.601 3.000 ? 1742 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.377 _refine_ls_shell.d_res_low 1.413 _refine_ls_shell.number_reflns_R_work 2746 _refine_ls_shell.R_factor_R_work 0.232 _refine_ls_shell.percent_reflns_obs 96.40 _refine_ls_shell.R_factor_R_free 0.276 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 148 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 3ZJP _struct.title 'M.acetivorans protoglobin in complex with imidazole' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZJP _struct_keywords.pdbx_keywords 'IRON-BINDING PROTEIN' _struct_keywords.text 'IRON-BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? K N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 21 ? VAL A 32 ? ASN A 21 VAL A 32 1 ? 12 HELX_P HELX_P2 2 THR A 35 ? GLU A 50 ? THR A 35 GLU A 50 1 ? 16 HELX_P HELX_P3 3 GLN A 52 ? SER A 66 ? GLN A 52 SER A 66 1 ? 15 HELX_P HELX_P4 4 HIS A 67 ? TYR A 72 ? HIS A 67 TYR A 72 1 ? 6 HELX_P HELX_P5 5 ASN A 82 ? ARG A 103 ? ASN A 82 ARG A 103 1 ? 22 HELX_P HELX_P6 6 ASP A 106 ? HIS A 121 ? ASP A 106 HIS A 121 1 ? 16 HELX_P HELX_P7 7 GLY A 138 ? PHE A 145 ? GLY A 138 PHE A 145 1 ? 8 HELX_P HELX_P8 8 PHE A 145 ? ALA A 158 ? PHE A 145 ALA A 158 1 ? 14 HELX_P HELX_P9 9 THR A 163 ? SER A 186 ? THR A 163 SER A 186 1 ? 24 HELX_P HELX_P10 10 TYR A 187 ? VAL A 190 ? TYR A 187 VAL A 190 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 120 NE2 ? ? ? 1_555 B HEM . FE ? ? A HIS 120 A HEM 200 1_555 ? ? ? ? ? ? ? 2.066 ? ? metalc2 metalc ? ? B HEM . FE ? ? ? 1_555 J IMD . N3 B ? A HEM 200 A IMD 449 1_555 ? ? ? ? ? ? ? 1.970 ? ? metalc3 metalc ? ? B HEM . FE ? ? ? 1_555 J IMD . N3 A ? A HEM 200 A IMD 449 1_555 ? ? ? ? ? ? ? 1.974 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HEM 200 ? 24 'BINDING SITE FOR RESIDUE HEM A 200' AC2 Software A PO4 201 ? 10 'BINDING SITE FOR RESIDUE PO4 A 201' AC3 Software A PO4 202 ? 8 'BINDING SITE FOR RESIDUE PO4 A 202' AC4 Software A GOL 203 ? 5 'BINDING SITE FOR RESIDUE GOL A 203' AC5 Software A GOL 204 ? 8 'BINDING SITE FOR RESIDUE GOL A 204' AC6 Software A GOL 205 ? 7 'BINDING SITE FOR RESIDUE GOL A 205' AC7 Software A GOL 206 ? 8 'BINDING SITE FOR RESIDUE GOL A 206' AC8 Software A GOL 207 ? 5 'BINDING SITE FOR RESIDUE GOL A 207' AC9 Software A IMD 449 ? 4 'BINDING SITE FOR RESIDUE IMD A 449' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 LEU A 70 ? LEU A 70 . ? 1_555 ? 2 AC1 24 TYR A 73 ? TYR A 73 . ? 1_555 ? 3 AC1 24 PHE A 74 ? PHE A 74 . ? 1_555 ? 4 AC1 24 TYR A 85 ? TYR A 85 . ? 1_555 ? 5 AC1 24 VAL A 89 ? VAL A 89 . ? 1_555 ? 6 AC1 24 ARG A 92 ? ARG A 92 . ? 1_555 ? 7 AC1 24 PHE A 93 ? PHE A 93 . ? 1_555 ? 8 AC1 24 TRP A 96 ? TRP A 96 . ? 1_555 ? 9 AC1 24 TYR A 112 ? TYR A 112 . ? 1_555 ? 10 AC1 24 ARG A 119 ? ARG A 119 . ? 1_555 ? 11 AC1 24 HIS A 120 ? HIS A 120 . ? 1_555 ? 12 AC1 24 LYS A 125 ? LYS A 125 . ? 1_555 ? 13 AC1 24 ASN A 126 ? ASN A 126 . ? 1_555 ? 14 AC1 24 ILE A 137 ? ILE A 137 . ? 1_555 ? 15 AC1 24 TYR A 141 ? TYR A 141 . ? 1_555 ? 16 AC1 24 LEU A 142 ? LEU A 142 . ? 1_555 ? 17 AC1 24 PHE A 145 ? PHE A 145 . ? 1_555 ? 18 AC1 24 VAL A 182 ? VAL A 182 . ? 1_555 ? 19 AC1 24 TRP A 185 ? TRP A 185 . ? 1_555 ? 20 AC1 24 IMD J . ? IMD A 449 . ? 1_555 ? 21 AC1 24 HOH K . ? HOH A 2167 . ? 1_555 ? 22 AC1 24 HOH K . ? HOH A 2168 . ? 1_555 ? 23 AC1 24 HOH K . ? HOH A 2200 . ? 1_555 ? 24 AC1 24 HOH K . ? HOH A 2208 . ? 1_555 ? 25 AC2 10 GLY A 12 ? GLY A 12 . ? 1_555 ? 26 AC2 10 GLY A 12 ? GLY A 12 . ? 2_554 ? 27 AC2 10 GLU A 13 ? GLU A 13 . ? 1_555 ? 28 AC2 10 THR A 14 ? THR A 14 . ? 1_555 ? 29 AC2 10 GLU A 15 ? GLU A 15 . ? 1_555 ? 30 AC2 10 GLU A 15 ? GLU A 15 . ? 2_554 ? 31 AC2 10 ASN A 16 ? ASN A 16 . ? 1_555 ? 32 AC2 10 ALA A 108 ? ALA A 108 . ? 1_555 ? 33 AC2 10 ASP A 111 ? ASP A 111 . ? 1_555 ? 34 AC2 10 HOH K . ? HOH A 2019 . ? 1_555 ? 35 AC3 8 TYR A 72 ? TYR A 72 . ? 1_555 ? 36 AC3 8 VAL A 134 ? VAL A 134 . ? 1_555 ? 37 AC3 8 PRO A 135 ? PRO A 135 . ? 1_555 ? 38 AC3 8 ASN A 136 ? ASN A 136 . ? 1_555 ? 39 AC3 8 GOL F . ? GOL A 204 . ? 1_555 ? 40 AC3 8 HOH K . ? HOH A 2135 . ? 1_555 ? 41 AC3 8 HOH K . ? HOH A 2253 . ? 1_555 ? 42 AC3 8 HOH K . ? HOH A 2254 . ? 1_555 ? 43 AC4 5 GLU A 13 ? GLU A 13 . ? 2_554 ? 44 AC4 5 ASN A 21 ? ASN A 21 . ? 1_555 ? 45 AC4 5 LEU A 22 ? LEU A 22 . ? 1_555 ? 46 AC4 5 GLU A 23 ? GLU A 23 . ? 1_555 ? 47 AC4 5 GLN A 107 ? GLN A 107 . ? 1_555 ? 48 AC5 8 SER A 66 ? SER A 66 . ? 4_455 ? 49 AC5 8 ARG A 122 ? ARG A 122 . ? 1_555 ? 50 AC5 8 PRO A 135 ? PRO A 135 . ? 1_555 ? 51 AC5 8 PO4 D . ? PO4 A 202 . ? 1_555 ? 52 AC5 8 HOH K . ? HOH A 2121 . ? 4_455 ? 53 AC5 8 HOH K . ? HOH A 2124 . ? 4_455 ? 54 AC5 8 HOH K . ? HOH A 2251 . ? 2_555 ? 55 AC5 8 HOH K . ? HOH A 2254 . ? 1_555 ? 56 AC6 7 LEU A 27 ? LEU A 27 . ? 2_555 ? 57 AC6 7 ARG A 140 ? ARG A 140 . ? 1_555 ? 58 AC6 7 TYR A 141 ? TYR A 141 . ? 1_555 ? 59 AC6 7 HOH K . ? HOH A 2128 . ? 1_555 ? 60 AC6 7 HOH K . ? HOH A 2222 . ? 1_555 ? 61 AC6 7 HOH K . ? HOH A 2253 . ? 1_555 ? 62 AC6 7 HOH K . ? HOH A 2256 . ? 1_555 ? 63 AC7 8 PRO A 164 ? PRO A 164 . ? 1_565 ? 64 AC7 8 GLU A 165 ? GLU A 165 . ? 1_565 ? 65 AC7 8 TYR A 187 ? TYR A 187 . ? 1_555 ? 66 AC7 8 PRO A 188 ? PRO A 188 . ? 1_555 ? 67 AC7 8 VAL A 190 ? VAL A 190 . ? 1_555 ? 68 AC7 8 LYS A 191 ? LYS A 191 . ? 2_555 ? 69 AC7 8 TYR A 192 ? TYR A 192 . ? 1_555 ? 70 AC7 8 HOH K . ? HOH A 2257 . ? 1_555 ? 71 AC8 5 GLU A 30 ? GLU A 30 . ? 1_555 ? 72 AC8 5 HIS A 67 ? HIS A 67 . ? 2_555 ? 73 AC8 5 PRO A 68 ? PRO A 68 . ? 2_555 ? 74 AC8 5 HIS A 69 ? HIS A 69 . ? 2_555 ? 75 AC8 5 HOH K . ? HOH A 2064 . ? 1_555 ? 76 AC9 4 TRP A 60 ? TRP A 60 . ? 1_555 ? 77 AC9 4 TYR A 61 ? TYR A 61 . ? 1_555 ? 78 AC9 4 PHE A 93 ? PHE A 93 . ? 1_555 ? 79 AC9 4 HEM B . ? HEM A 200 . ? 1_555 ? # _database_PDB_matrix.entry_id 3ZJP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ZJP _atom_sites.fract_transf_matrix[1][1] 0.012505 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000542 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020383 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019462 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 VAL 3 3 ? ? ? A . n A 1 4 GLU 4 4 ? ? ? A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 TRP 60 60 60 TRP TRP A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 PHE 93 93 93 PHE PHE A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 TYR 112 112 112 TYR TYR A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 HIS 120 120 120 HIS HIS A . n A 1 121 HIS 121 121 121 HIS HIS A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 ASN 126 126 126 ASN ASN A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 ASN 130 130 130 ASN ASN A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 PRO 135 135 135 PRO PRO A . n A 1 136 ASN 136 136 136 ASN ASN A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 TYR 139 139 139 TYR TYR A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 TYR 141 141 141 TYR TYR A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 MET 153 153 153 MET MET A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 ARG 159 159 159 ARG ARG A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 HIS 162 162 162 HIS HIS A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 GLU 168 168 168 GLU GLU A . n A 1 169 LYS 169 169 169 LYS LYS A . n A 1 170 MET 170 170 170 MET MET A . n A 1 171 TYR 171 171 171 TYR TYR A . n A 1 172 GLN 172 172 172 GLN GLN A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 TRP 174 174 174 TRP TRP A . n A 1 175 PHE 175 175 175 PHE PHE A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 GLN 181 181 181 GLN GLN A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 TRP 185 185 185 TRP TRP A . n A 1 186 SER 186 186 186 SER SER A . n A 1 187 TYR 187 187 187 TYR TYR A . n A 1 188 PRO 188 188 188 PRO PRO A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 TYR 192 192 192 TYR TYR A . n A 1 193 GLY 193 193 193 GLY GLY A . n A 1 194 ASP 194 194 194 ASP ASP A . n A 1 195 PHE 195 195 195 PHE PHE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM 1 200 200 HEM HEM A . C 3 PO4 1 201 201 PO4 PO4 A . D 3 PO4 1 202 202 PO4 PO4 A . E 4 GOL 1 203 203 GOL GOL A . F 4 GOL 1 204 204 GOL GOL A . G 4 GOL 1 205 205 GOL GOL A . H 4 GOL 1 206 206 GOL GOL A . I 4 GOL 1 207 207 GOL GOL A . J 5 IMD 1 449 449 IMD IMD A . K 6 HOH 1 2001 2001 HOH HOH A . K 6 HOH 2 2002 2002 HOH HOH A . K 6 HOH 3 2003 2003 HOH HOH A . K 6 HOH 4 2004 2004 HOH HOH A . K 6 HOH 5 2005 2005 HOH HOH A . K 6 HOH 6 2006 2006 HOH HOH A . K 6 HOH 7 2007 2007 HOH HOH A . K 6 HOH 8 2008 2008 HOH HOH A . K 6 HOH 9 2009 2009 HOH HOH A . K 6 HOH 10 2010 2010 HOH HOH A . K 6 HOH 11 2011 2011 HOH HOH A . K 6 HOH 12 2013 2013 HOH HOH A . K 6 HOH 13 2014 2014 HOH HOH A . K 6 HOH 14 2015 2015 HOH HOH A . K 6 HOH 15 2016 2016 HOH HOH A . K 6 HOH 16 2017 2017 HOH HOH A . K 6 HOH 17 2018 2018 HOH HOH A . K 6 HOH 18 2019 2019 HOH HOH A . K 6 HOH 19 2020 2020 HOH HOH A . K 6 HOH 20 2021 2021 HOH HOH A . K 6 HOH 21 2022 2022 HOH HOH A . K 6 HOH 22 2023 2023 HOH HOH A . K 6 HOH 23 2024 2024 HOH HOH A . K 6 HOH 24 2025 2025 HOH HOH A . K 6 HOH 25 2026 2026 HOH HOH A . K 6 HOH 26 2027 2027 HOH HOH A . K 6 HOH 27 2028 2028 HOH HOH A . K 6 HOH 28 2029 2029 HOH HOH A . K 6 HOH 29 2030 2030 HOH HOH A . K 6 HOH 30 2031 2031 HOH HOH A . K 6 HOH 31 2032 2032 HOH HOH A . K 6 HOH 32 2033 2033 HOH HOH A . K 6 HOH 33 2034 2034 HOH HOH A . K 6 HOH 34 2035 2035 HOH HOH A . K 6 HOH 35 2036 2036 HOH HOH A . K 6 HOH 36 2037 2037 HOH HOH A . K 6 HOH 37 2038 2038 HOH HOH A . K 6 HOH 38 2039 2039 HOH HOH A . K 6 HOH 39 2040 2040 HOH HOH A . K 6 HOH 40 2041 2041 HOH HOH A . K 6 HOH 41 2042 2042 HOH HOH A . K 6 HOH 42 2043 2043 HOH HOH A . K 6 HOH 43 2044 2044 HOH HOH A . K 6 HOH 44 2045 2045 HOH HOH A . K 6 HOH 45 2046 2046 HOH HOH A . K 6 HOH 46 2047 2047 HOH HOH A . K 6 HOH 47 2048 2048 HOH HOH A . K 6 HOH 48 2049 2049 HOH HOH A . K 6 HOH 49 2050 2050 HOH HOH A . K 6 HOH 50 2051 2051 HOH HOH A . K 6 HOH 51 2052 2052 HOH HOH A . K 6 HOH 52 2053 2053 HOH HOH A . K 6 HOH 53 2054 2054 HOH HOH A . K 6 HOH 54 2055 2055 HOH HOH A . K 6 HOH 55 2056 2056 HOH HOH A . K 6 HOH 56 2057 2057 HOH HOH A . K 6 HOH 57 2058 2058 HOH HOH A . K 6 HOH 58 2059 2059 HOH HOH A . K 6 HOH 59 2060 2060 HOH HOH A . K 6 HOH 60 2061 2061 HOH HOH A . K 6 HOH 61 2062 2062 HOH HOH A . K 6 HOH 62 2063 2063 HOH HOH A . K 6 HOH 63 2064 2064 HOH HOH A . K 6 HOH 64 2065 2065 HOH HOH A . K 6 HOH 65 2066 2066 HOH HOH A . K 6 HOH 66 2067 2067 HOH HOH A . K 6 HOH 67 2068 2068 HOH HOH A . K 6 HOH 68 2069 2069 HOH HOH A . K 6 HOH 69 2070 2070 HOH HOH A . K 6 HOH 70 2071 2071 HOH HOH A . K 6 HOH 71 2072 2072 HOH HOH A . K 6 HOH 72 2073 2073 HOH HOH A . K 6 HOH 73 2074 2074 HOH HOH A . K 6 HOH 74 2075 2075 HOH HOH A . K 6 HOH 75 2076 2076 HOH HOH A . K 6 HOH 76 2077 2077 HOH HOH A . K 6 HOH 77 2078 2078 HOH HOH A . K 6 HOH 78 2079 2079 HOH HOH A . K 6 HOH 79 2080 2080 HOH HOH A . K 6 HOH 80 2081 2081 HOH HOH A . K 6 HOH 81 2082 2082 HOH HOH A . K 6 HOH 82 2083 2083 HOH HOH A . K 6 HOH 83 2084 2084 HOH HOH A . K 6 HOH 84 2085 2085 HOH HOH A . K 6 HOH 85 2086 2086 HOH HOH A . K 6 HOH 86 2087 2087 HOH HOH A . K 6 HOH 87 2088 2088 HOH HOH A . K 6 HOH 88 2089 2089 HOH HOH A . K 6 HOH 89 2090 2090 HOH HOH A . K 6 HOH 90 2091 2091 HOH HOH A . K 6 HOH 91 2092 2092 HOH HOH A . K 6 HOH 92 2093 2093 HOH HOH A . K 6 HOH 93 2094 2094 HOH HOH A . K 6 HOH 94 2095 2095 HOH HOH A . K 6 HOH 95 2096 2096 HOH HOH A . K 6 HOH 96 2097 2097 HOH HOH A . K 6 HOH 97 2098 2098 HOH HOH A . K 6 HOH 98 2099 2099 HOH HOH A . K 6 HOH 99 2100 2100 HOH HOH A . K 6 HOH 100 2101 2101 HOH HOH A . K 6 HOH 101 2102 2102 HOH HOH A . K 6 HOH 102 2103 2103 HOH HOH A . K 6 HOH 103 2104 2104 HOH HOH A . K 6 HOH 104 2105 2105 HOH HOH A . K 6 HOH 105 2106 2106 HOH HOH A . K 6 HOH 106 2107 2107 HOH HOH A . K 6 HOH 107 2108 2108 HOH HOH A . K 6 HOH 108 2109 2109 HOH HOH A . K 6 HOH 109 2110 2110 HOH HOH A . K 6 HOH 110 2111 2111 HOH HOH A . K 6 HOH 111 2112 2112 HOH HOH A . K 6 HOH 112 2114 2114 HOH HOH A . K 6 HOH 113 2116 2116 HOH HOH A . K 6 HOH 114 2117 2117 HOH HOH A . K 6 HOH 115 2118 2118 HOH HOH A . K 6 HOH 116 2119 2119 HOH HOH A . K 6 HOH 117 2120 2120 HOH HOH A . K 6 HOH 118 2121 2121 HOH HOH A . K 6 HOH 119 2122 2122 HOH HOH A . K 6 HOH 120 2123 2123 HOH HOH A . K 6 HOH 121 2124 2124 HOH HOH A . K 6 HOH 122 2125 2125 HOH HOH A . K 6 HOH 123 2126 2126 HOH HOH A . K 6 HOH 124 2127 2127 HOH HOH A . K 6 HOH 125 2128 2128 HOH HOH A . K 6 HOH 126 2129 2129 HOH HOH A . K 6 HOH 127 2130 2130 HOH HOH A . K 6 HOH 128 2131 2131 HOH HOH A . K 6 HOH 129 2132 2132 HOH HOH A . K 6 HOH 130 2133 2133 HOH HOH A . K 6 HOH 131 2134 2134 HOH HOH A . K 6 HOH 132 2135 2135 HOH HOH A . K 6 HOH 133 2136 2136 HOH HOH A . K 6 HOH 134 2137 2137 HOH HOH A . K 6 HOH 135 2139 2139 HOH HOH A . K 6 HOH 136 2140 2140 HOH HOH A . K 6 HOH 137 2141 2141 HOH HOH A . K 6 HOH 138 2142 2142 HOH HOH A . K 6 HOH 139 2143 2143 HOH HOH A . K 6 HOH 140 2144 2144 HOH HOH A . K 6 HOH 141 2145 2145 HOH HOH A . K 6 HOH 142 2146 2146 HOH HOH A . K 6 HOH 143 2147 2147 HOH HOH A . K 6 HOH 144 2148 2148 HOH HOH A . K 6 HOH 145 2149 2149 HOH HOH A . K 6 HOH 146 2150 2150 HOH HOH A . K 6 HOH 147 2151 2151 HOH HOH A . K 6 HOH 148 2152 2152 HOH HOH A . K 6 HOH 149 2153 2153 HOH HOH A . K 6 HOH 150 2154 2154 HOH HOH A . K 6 HOH 151 2155 2155 HOH HOH A . K 6 HOH 152 2156 2156 HOH HOH A . K 6 HOH 153 2157 2157 HOH HOH A . K 6 HOH 154 2158 2158 HOH HOH A . K 6 HOH 155 2159 2159 HOH HOH A . K 6 HOH 156 2160 2160 HOH HOH A . K 6 HOH 157 2161 2161 HOH HOH A . K 6 HOH 158 2162 2162 HOH HOH A . K 6 HOH 159 2163 2163 HOH HOH A . K 6 HOH 160 2164 2164 HOH HOH A . K 6 HOH 161 2165 2165 HOH HOH A . K 6 HOH 162 2166 2166 HOH HOH A . K 6 HOH 163 2167 2167 HOH HOH A . K 6 HOH 164 2168 2168 HOH HOH A . K 6 HOH 165 2169 2169 HOH HOH A . K 6 HOH 166 2170 2170 HOH HOH A . K 6 HOH 167 2171 2171 HOH HOH A . K 6 HOH 168 2172 2172 HOH HOH A . K 6 HOH 169 2173 2173 HOH HOH A . K 6 HOH 170 2174 2174 HOH HOH A . K 6 HOH 171 2175 2175 HOH HOH A . K 6 HOH 172 2176 2176 HOH HOH A . K 6 HOH 173 2177 2177 HOH HOH A . K 6 HOH 174 2178 2178 HOH HOH A . K 6 HOH 175 2179 2179 HOH HOH A . K 6 HOH 176 2180 2180 HOH HOH A . K 6 HOH 177 2181 2181 HOH HOH A . K 6 HOH 178 2182 2182 HOH HOH A . K 6 HOH 179 2183 2183 HOH HOH A . K 6 HOH 180 2184 2184 HOH HOH A . K 6 HOH 181 2185 2185 HOH HOH A . K 6 HOH 182 2186 2186 HOH HOH A . K 6 HOH 183 2187 2187 HOH HOH A . K 6 HOH 184 2188 2188 HOH HOH A . K 6 HOH 185 2189 2189 HOH HOH A . K 6 HOH 186 2190 2190 HOH HOH A . K 6 HOH 187 2191 2191 HOH HOH A . K 6 HOH 188 2192 2192 HOH HOH A . K 6 HOH 189 2193 2193 HOH HOH A . K 6 HOH 190 2194 2194 HOH HOH A . K 6 HOH 191 2195 2195 HOH HOH A . K 6 HOH 192 2196 2196 HOH HOH A . K 6 HOH 193 2197 2197 HOH HOH A . K 6 HOH 194 2198 2198 HOH HOH A . K 6 HOH 195 2199 2199 HOH HOH A . K 6 HOH 196 2200 2200 HOH HOH A . K 6 HOH 197 2201 2201 HOH HOH A . K 6 HOH 198 2202 2202 HOH HOH A . K 6 HOH 199 2203 2203 HOH HOH A . K 6 HOH 200 2204 2204 HOH HOH A . K 6 HOH 201 2205 2205 HOH HOH A . K 6 HOH 202 2206 2206 HOH HOH A . K 6 HOH 203 2207 2207 HOH HOH A . K 6 HOH 204 2208 2208 HOH HOH A . K 6 HOH 205 2209 2209 HOH HOH A . K 6 HOH 206 2210 2210 HOH HOH A . K 6 HOH 207 2211 2211 HOH HOH A . K 6 HOH 208 2212 2212 HOH HOH A . K 6 HOH 209 2113 2113 HOH HOH A . K 6 HOH 210 2214 2214 HOH HOH A . K 6 HOH 211 2216 2216 HOH HOH A . K 6 HOH 212 2217 2217 HOH HOH A . K 6 HOH 213 2218 2218 HOH HOH A . K 6 HOH 214 2219 2219 HOH HOH A . K 6 HOH 215 2220 2220 HOH HOH A . K 6 HOH 216 2221 2221 HOH HOH A . K 6 HOH 217 2222 2222 HOH HOH A . K 6 HOH 218 2223 2223 HOH HOH A . K 6 HOH 219 2224 2224 HOH HOH A . K 6 HOH 220 2225 2225 HOH HOH A . K 6 HOH 221 2226 2226 HOH HOH A . K 6 HOH 222 2227 2227 HOH HOH A . K 6 HOH 223 2228 2228 HOH HOH A . K 6 HOH 224 2229 2229 HOH HOH A . K 6 HOH 225 2230 2230 HOH HOH A . K 6 HOH 226 2231 2231 HOH HOH A . K 6 HOH 227 2232 2232 HOH HOH A . K 6 HOH 228 2233 2233 HOH HOH A . K 6 HOH 229 2234 2234 HOH HOH A . K 6 HOH 230 2235 2235 HOH HOH A . K 6 HOH 231 2236 2236 HOH HOH A . K 6 HOH 232 2237 2237 HOH HOH A . K 6 HOH 233 2238 2238 HOH HOH A . K 6 HOH 234 2239 2239 HOH HOH A . K 6 HOH 235 2240 2240 HOH HOH A . K 6 HOH 236 2241 2241 HOH HOH A . K 6 HOH 237 2242 2242 HOH HOH A . K 6 HOH 238 2243 2243 HOH HOH A . K 6 HOH 239 2244 2244 HOH HOH A . K 6 HOH 240 2245 2245 HOH HOH A . K 6 HOH 241 2246 2246 HOH HOH A . K 6 HOH 242 2247 2247 HOH HOH A . K 6 HOH 243 2248 2248 HOH HOH A . K 6 HOH 244 2249 2249 HOH HOH A . K 6 HOH 245 2250 2250 HOH HOH A . K 6 HOH 246 2251 2251 HOH HOH A . K 6 HOH 247 2252 2252 HOH HOH A . K 6 HOH 248 2253 2253 HOH HOH A . K 6 HOH 249 2254 2254 HOH HOH A . K 6 HOH 250 2255 2255 HOH HOH A . K 6 HOH 251 2256 2256 HOH HOH A . K 6 HOH 252 2257 2257 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10100 ? 1 MORE -87.3 ? 1 'SSA (A^2)' 15220 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2028 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id K _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 NA ? B HEM . ? A HEM 200 ? 1_555 88.3 ? 2 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 NB ? B HEM . ? A HEM 200 ? 1_555 92.8 ? 3 NA ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 NB ? B HEM . ? A HEM 200 ? 1_555 90.8 ? 4 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 NC ? B HEM . ? A HEM 200 ? 1_555 94.0 ? 5 NA ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 NC ? B HEM . ? A HEM 200 ? 1_555 177.6 ? 6 NB ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 NC ? B HEM . ? A HEM 200 ? 1_555 88.9 ? 7 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 ND ? B HEM . ? A HEM 200 ? 1_555 90.5 ? 8 NA ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 ND ? B HEM . ? A HEM 200 ? 1_555 88.9 ? 9 NB ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 ND ? B HEM . ? A HEM 200 ? 1_555 176.7 ? 10 NC ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 ND ? B HEM . ? A HEM 200 ? 1_555 91.3 ? 11 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 B J IMD . ? A IMD 449 ? 1_555 174.6 ? 12 NA ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 B J IMD . ? A IMD 449 ? 1_555 88.5 ? 13 NB ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 B J IMD . ? A IMD 449 ? 1_555 91.7 ? 14 NC ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 B J IMD . ? A IMD 449 ? 1_555 89.2 ? 15 ND ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 B J IMD . ? A IMD 449 ? 1_555 85.1 ? 16 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 A J IMD . ? A IMD 449 ? 1_555 177.1 ? 17 NA ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 A J IMD . ? A IMD 449 ? 1_555 89.4 ? 18 NB ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 A J IMD . ? A IMD 449 ? 1_555 89.2 ? 19 NC ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 A J IMD . ? A IMD 449 ? 1_555 88.2 ? 20 ND ? B HEM . ? A HEM 200 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 A J IMD . ? A IMD 449 ? 1_555 87.6 ? 21 N3 B J IMD . ? A IMD 449 ? 1_555 FE ? B HEM . ? A HEM 200 ? 1_555 N3 A J IMD . ? A IMD 449 ? 1_555 2.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-06-26 2 'Structure model' 1 1 2016-12-21 3 'Structure model' 1 2 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' Other 7 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 5 3 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 6 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 16 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 18 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0110 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 3ZJP _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'C101S MUTATED FOR CRYSTALLIZATION PURPOSES' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2055 ? ? O A HOH 2131 ? ? 0.00 2 1 O A HOH 2072 ? ? O A HOH 2073 ? ? 0.00 3 1 O1 A GOL 205 ? ? O A HOH 2256 ? ? 1.94 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 13 ? ? -146.88 26.75 2 1 ASP A 106 ? ? -118.12 -164.26 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2090 ? 6.51 . 2 1 O ? A HOH 2106 ? 6.95 . 3 1 O ? A HOH 2107 ? 7.48 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A VAL 3 ? A VAL 3 4 1 Y 1 A GLU 4 ? A GLU 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HEM CHA C N N 151 HEM CHB C N N 152 HEM CHC C N N 153 HEM CHD C N N 154 HEM C1A C Y N 155 HEM C2A C Y N 156 HEM C3A C Y N 157 HEM C4A C Y N 158 HEM CMA C N N 159 HEM CAA C N N 160 HEM CBA C N N 161 HEM CGA C N N 162 HEM O1A O N N 163 HEM O2A O N N 164 HEM C1B C N N 165 HEM C2B C N N 166 HEM C3B C N N 167 HEM C4B C N N 168 HEM CMB C N N 169 HEM CAB C N N 170 HEM CBB C N N 171 HEM C1C C Y N 172 HEM C2C C Y N 173 HEM C3C C Y N 174 HEM C4C C Y N 175 HEM CMC C N N 176 HEM CAC C N N 177 HEM CBC C N N 178 HEM C1D C N N 179 HEM C2D C N N 180 HEM C3D C N N 181 HEM C4D C N N 182 HEM CMD C N N 183 HEM CAD C N N 184 HEM CBD C N N 185 HEM CGD C N N 186 HEM O1D O N N 187 HEM O2D O N N 188 HEM NA N Y N 189 HEM NB N N N 190 HEM NC N Y N 191 HEM ND N N N 192 HEM FE FE N N 193 HEM HHB H N N 194 HEM HHC H N N 195 HEM HHD H N N 196 HEM HMA H N N 197 HEM HMAA H N N 198 HEM HMAB H N N 199 HEM HAA H N N 200 HEM HAAA H N N 201 HEM HBA H N N 202 HEM HBAA H N N 203 HEM HMB H N N 204 HEM HMBA H N N 205 HEM HMBB H N N 206 HEM HAB H N N 207 HEM HBB H N N 208 HEM HBBA H N N 209 HEM HMC H N N 210 HEM HMCA H N N 211 HEM HMCB H N N 212 HEM HAC H N N 213 HEM HBC H N N 214 HEM HBCA H N N 215 HEM HMD H N N 216 HEM HMDA H N N 217 HEM HMDB H N N 218 HEM HAD H N N 219 HEM HADA H N N 220 HEM HBD H N N 221 HEM HBDA H N N 222 HEM H2A H N N 223 HEM H2D H N N 224 HEM HHA H N N 225 HIS N N N N 226 HIS CA C N S 227 HIS C C N N 228 HIS O O N N 229 HIS CB C N N 230 HIS CG C Y N 231 HIS ND1 N Y N 232 HIS CD2 C Y N 233 HIS CE1 C Y N 234 HIS NE2 N Y N 235 HIS OXT O N N 236 HIS H H N N 237 HIS H2 H N N 238 HIS HA H N N 239 HIS HB2 H N N 240 HIS HB3 H N N 241 HIS HD1 H N N 242 HIS HD2 H N N 243 HIS HE1 H N N 244 HIS HE2 H N N 245 HIS HXT H N N 246 HOH O O N N 247 HOH H1 H N N 248 HOH H2 H N N 249 ILE N N N N 250 ILE CA C N S 251 ILE C C N N 252 ILE O O N N 253 ILE CB C N S 254 ILE CG1 C N N 255 ILE CG2 C N N 256 ILE CD1 C N N 257 ILE OXT O N N 258 ILE H H N N 259 ILE H2 H N N 260 ILE HA H N N 261 ILE HB H N N 262 ILE HG12 H N N 263 ILE HG13 H N N 264 ILE HG21 H N N 265 ILE HG22 H N N 266 ILE HG23 H N N 267 ILE HD11 H N N 268 ILE HD12 H N N 269 ILE HD13 H N N 270 ILE HXT H N N 271 IMD N1 N Y N 272 IMD C2 C Y N 273 IMD N3 N Y N 274 IMD C4 C Y N 275 IMD C5 C Y N 276 IMD HN1 H N N 277 IMD H2 H N N 278 IMD HN3 H N N 279 IMD H4 H N N 280 IMD H5 H N N 281 LEU N N N N 282 LEU CA C N S 283 LEU C C N N 284 LEU O O N N 285 LEU CB C N N 286 LEU CG C N N 287 LEU CD1 C N N 288 LEU CD2 C N N 289 LEU OXT O N N 290 LEU H H N N 291 LEU H2 H N N 292 LEU HA H N N 293 LEU HB2 H N N 294 LEU HB3 H N N 295 LEU HG H N N 296 LEU HD11 H N N 297 LEU HD12 H N N 298 LEU HD13 H N N 299 LEU HD21 H N N 300 LEU HD22 H N N 301 LEU HD23 H N N 302 LEU HXT H N N 303 LYS N N N N 304 LYS CA C N S 305 LYS C C N N 306 LYS O O N N 307 LYS CB C N N 308 LYS CG C N N 309 LYS CD C N N 310 LYS CE C N N 311 LYS NZ N N N 312 LYS OXT O N N 313 LYS H H N N 314 LYS H2 H N N 315 LYS HA H N N 316 LYS HB2 H N N 317 LYS HB3 H N N 318 LYS HG2 H N N 319 LYS HG3 H N N 320 LYS HD2 H N N 321 LYS HD3 H N N 322 LYS HE2 H N N 323 LYS HE3 H N N 324 LYS HZ1 H N N 325 LYS HZ2 H N N 326 LYS HZ3 H N N 327 LYS HXT H N N 328 MET N N N N 329 MET CA C N S 330 MET C C N N 331 MET O O N N 332 MET CB C N N 333 MET CG C N N 334 MET SD S N N 335 MET CE C N N 336 MET OXT O N N 337 MET H H N N 338 MET H2 H N N 339 MET HA H N N 340 MET HB2 H N N 341 MET HB3 H N N 342 MET HG2 H N N 343 MET HG3 H N N 344 MET HE1 H N N 345 MET HE2 H N N 346 MET HE3 H N N 347 MET HXT H N N 348 PHE N N N N 349 PHE CA C N S 350 PHE C C N N 351 PHE O O N N 352 PHE CB C N N 353 PHE CG C Y N 354 PHE CD1 C Y N 355 PHE CD2 C Y N 356 PHE CE1 C Y N 357 PHE CE2 C Y N 358 PHE CZ C Y N 359 PHE OXT O N N 360 PHE H H N N 361 PHE H2 H N N 362 PHE HA H N N 363 PHE HB2 H N N 364 PHE HB3 H N N 365 PHE HD1 H N N 366 PHE HD2 H N N 367 PHE HE1 H N N 368 PHE HE2 H N N 369 PHE HZ H N N 370 PHE HXT H N N 371 PO4 P P N N 372 PO4 O1 O N N 373 PO4 O2 O N N 374 PO4 O3 O N N 375 PO4 O4 O N N 376 PRO N N N N 377 PRO CA C N S 378 PRO C C N N 379 PRO O O N N 380 PRO CB C N N 381 PRO CG C N N 382 PRO CD C N N 383 PRO OXT O N N 384 PRO H H N N 385 PRO HA H N N 386 PRO HB2 H N N 387 PRO HB3 H N N 388 PRO HG2 H N N 389 PRO HG3 H N N 390 PRO HD2 H N N 391 PRO HD3 H N N 392 PRO HXT H N N 393 SER N N N N 394 SER CA C N S 395 SER C C N N 396 SER O O N N 397 SER CB C N N 398 SER OG O N N 399 SER OXT O N N 400 SER H H N N 401 SER H2 H N N 402 SER HA H N N 403 SER HB2 H N N 404 SER HB3 H N N 405 SER HG H N N 406 SER HXT H N N 407 THR N N N N 408 THR CA C N S 409 THR C C N N 410 THR O O N N 411 THR CB C N R 412 THR OG1 O N N 413 THR CG2 C N N 414 THR OXT O N N 415 THR H H N N 416 THR H2 H N N 417 THR HA H N N 418 THR HB H N N 419 THR HG1 H N N 420 THR HG21 H N N 421 THR HG22 H N N 422 THR HG23 H N N 423 THR HXT H N N 424 TRP N N N N 425 TRP CA C N S 426 TRP C C N N 427 TRP O O N N 428 TRP CB C N N 429 TRP CG C Y N 430 TRP CD1 C Y N 431 TRP CD2 C Y N 432 TRP NE1 N Y N 433 TRP CE2 C Y N 434 TRP CE3 C Y N 435 TRP CZ2 C Y N 436 TRP CZ3 C Y N 437 TRP CH2 C Y N 438 TRP OXT O N N 439 TRP H H N N 440 TRP H2 H N N 441 TRP HA H N N 442 TRP HB2 H N N 443 TRP HB3 H N N 444 TRP HD1 H N N 445 TRP HE1 H N N 446 TRP HE3 H N N 447 TRP HZ2 H N N 448 TRP HZ3 H N N 449 TRP HH2 H N N 450 TRP HXT H N N 451 TYR N N N N 452 TYR CA C N S 453 TYR C C N N 454 TYR O O N N 455 TYR CB C N N 456 TYR CG C Y N 457 TYR CD1 C Y N 458 TYR CD2 C Y N 459 TYR CE1 C Y N 460 TYR CE2 C Y N 461 TYR CZ C Y N 462 TYR OH O N N 463 TYR OXT O N N 464 TYR H H N N 465 TYR H2 H N N 466 TYR HA H N N 467 TYR HB2 H N N 468 TYR HB3 H N N 469 TYR HD1 H N N 470 TYR HD2 H N N 471 TYR HE1 H N N 472 TYR HE2 H N N 473 TYR HH H N N 474 TYR HXT H N N 475 VAL N N N N 476 VAL CA C N S 477 VAL C C N N 478 VAL O O N N 479 VAL CB C N N 480 VAL CG1 C N N 481 VAL CG2 C N N 482 VAL OXT O N N 483 VAL H H N N 484 VAL H2 H N N 485 VAL HA H N N 486 VAL HB H N N 487 VAL HG11 H N N 488 VAL HG12 H N N 489 VAL HG13 H N N 490 VAL HG21 H N N 491 VAL HG22 H N N 492 VAL HG23 H N N 493 VAL HXT H N N 494 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HEM CHA C1A sing N N 142 HEM CHA C4D doub N N 143 HEM CHA HHA sing N N 144 HEM CHB C4A sing N N 145 HEM CHB C1B doub N N 146 HEM CHB HHB sing N N 147 HEM CHC C4B sing N N 148 HEM CHC C1C doub N N 149 HEM CHC HHC sing N N 150 HEM CHD C4C doub N N 151 HEM CHD C1D sing N N 152 HEM CHD HHD sing N N 153 HEM C1A C2A doub Y N 154 HEM C1A NA sing Y N 155 HEM C2A C3A sing Y N 156 HEM C2A CAA sing N N 157 HEM C3A C4A doub Y N 158 HEM C3A CMA sing N N 159 HEM C4A NA sing Y N 160 HEM CMA HMA sing N N 161 HEM CMA HMAA sing N N 162 HEM CMA HMAB sing N N 163 HEM CAA CBA sing N N 164 HEM CAA HAA sing N N 165 HEM CAA HAAA sing N N 166 HEM CBA CGA sing N N 167 HEM CBA HBA sing N N 168 HEM CBA HBAA sing N N 169 HEM CGA O1A doub N N 170 HEM CGA O2A sing N N 171 HEM C1B C2B sing N N 172 HEM C1B NB sing N N 173 HEM C2B C3B doub N N 174 HEM C2B CMB sing N N 175 HEM C3B C4B sing N N 176 HEM C3B CAB sing N N 177 HEM C4B NB doub N N 178 HEM CMB HMB sing N N 179 HEM CMB HMBA sing N N 180 HEM CMB HMBB sing N N 181 HEM CAB CBB doub N N 182 HEM CAB HAB sing N N 183 HEM CBB HBB sing N N 184 HEM CBB HBBA sing N N 185 HEM C1C C2C sing Y N 186 HEM C1C NC sing Y N 187 HEM C2C C3C doub Y N 188 HEM C2C CMC sing N N 189 HEM C3C C4C sing Y N 190 HEM C3C CAC sing N N 191 HEM C4C NC sing Y N 192 HEM CMC HMC sing N N 193 HEM CMC HMCA sing N N 194 HEM CMC HMCB sing N N 195 HEM CAC CBC doub N N 196 HEM CAC HAC sing N N 197 HEM CBC HBC sing N N 198 HEM CBC HBCA sing N N 199 HEM C1D C2D sing N N 200 HEM C1D ND doub N N 201 HEM C2D C3D doub N N 202 HEM C2D CMD sing N N 203 HEM C3D C4D sing N N 204 HEM C3D CAD sing N N 205 HEM C4D ND sing N N 206 HEM CMD HMD sing N N 207 HEM CMD HMDA sing N N 208 HEM CMD HMDB sing N N 209 HEM CAD CBD sing N N 210 HEM CAD HAD sing N N 211 HEM CAD HADA sing N N 212 HEM CBD CGD sing N N 213 HEM CBD HBD sing N N 214 HEM CBD HBDA sing N N 215 HEM CGD O1D doub N N 216 HEM CGD O2D sing N N 217 HEM O2A H2A sing N N 218 HEM O2D H2D sing N N 219 HEM FE NA sing N N 220 HEM FE NB sing N N 221 HEM FE NC sing N N 222 HEM FE ND sing N N 223 HIS N CA sing N N 224 HIS N H sing N N 225 HIS N H2 sing N N 226 HIS CA C sing N N 227 HIS CA CB sing N N 228 HIS CA HA sing N N 229 HIS C O doub N N 230 HIS C OXT sing N N 231 HIS CB CG sing N N 232 HIS CB HB2 sing N N 233 HIS CB HB3 sing N N 234 HIS CG ND1 sing Y N 235 HIS CG CD2 doub Y N 236 HIS ND1 CE1 doub Y N 237 HIS ND1 HD1 sing N N 238 HIS CD2 NE2 sing Y N 239 HIS CD2 HD2 sing N N 240 HIS CE1 NE2 sing Y N 241 HIS CE1 HE1 sing N N 242 HIS NE2 HE2 sing N N 243 HIS OXT HXT sing N N 244 HOH O H1 sing N N 245 HOH O H2 sing N N 246 ILE N CA sing N N 247 ILE N H sing N N 248 ILE N H2 sing N N 249 ILE CA C sing N N 250 ILE CA CB sing N N 251 ILE CA HA sing N N 252 ILE C O doub N N 253 ILE C OXT sing N N 254 ILE CB CG1 sing N N 255 ILE CB CG2 sing N N 256 ILE CB HB sing N N 257 ILE CG1 CD1 sing N N 258 ILE CG1 HG12 sing N N 259 ILE CG1 HG13 sing N N 260 ILE CG2 HG21 sing N N 261 ILE CG2 HG22 sing N N 262 ILE CG2 HG23 sing N N 263 ILE CD1 HD11 sing N N 264 ILE CD1 HD12 sing N N 265 ILE CD1 HD13 sing N N 266 ILE OXT HXT sing N N 267 IMD N1 C2 sing Y N 268 IMD N1 C5 sing Y N 269 IMD N1 HN1 sing N N 270 IMD C2 N3 doub Y N 271 IMD C2 H2 sing N N 272 IMD N3 C4 sing Y N 273 IMD N3 HN3 sing N N 274 IMD C4 C5 doub Y N 275 IMD C4 H4 sing N N 276 IMD C5 H5 sing N N 277 LEU N CA sing N N 278 LEU N H sing N N 279 LEU N H2 sing N N 280 LEU CA C sing N N 281 LEU CA CB sing N N 282 LEU CA HA sing N N 283 LEU C O doub N N 284 LEU C OXT sing N N 285 LEU CB CG sing N N 286 LEU CB HB2 sing N N 287 LEU CB HB3 sing N N 288 LEU CG CD1 sing N N 289 LEU CG CD2 sing N N 290 LEU CG HG sing N N 291 LEU CD1 HD11 sing N N 292 LEU CD1 HD12 sing N N 293 LEU CD1 HD13 sing N N 294 LEU CD2 HD21 sing N N 295 LEU CD2 HD22 sing N N 296 LEU CD2 HD23 sing N N 297 LEU OXT HXT sing N N 298 LYS N CA sing N N 299 LYS N H sing N N 300 LYS N H2 sing N N 301 LYS CA C sing N N 302 LYS CA CB sing N N 303 LYS CA HA sing N N 304 LYS C O doub N N 305 LYS C OXT sing N N 306 LYS CB CG sing N N 307 LYS CB HB2 sing N N 308 LYS CB HB3 sing N N 309 LYS CG CD sing N N 310 LYS CG HG2 sing N N 311 LYS CG HG3 sing N N 312 LYS CD CE sing N N 313 LYS CD HD2 sing N N 314 LYS CD HD3 sing N N 315 LYS CE NZ sing N N 316 LYS CE HE2 sing N N 317 LYS CE HE3 sing N N 318 LYS NZ HZ1 sing N N 319 LYS NZ HZ2 sing N N 320 LYS NZ HZ3 sing N N 321 LYS OXT HXT sing N N 322 MET N CA sing N N 323 MET N H sing N N 324 MET N H2 sing N N 325 MET CA C sing N N 326 MET CA CB sing N N 327 MET CA HA sing N N 328 MET C O doub N N 329 MET C OXT sing N N 330 MET CB CG sing N N 331 MET CB HB2 sing N N 332 MET CB HB3 sing N N 333 MET CG SD sing N N 334 MET CG HG2 sing N N 335 MET CG HG3 sing N N 336 MET SD CE sing N N 337 MET CE HE1 sing N N 338 MET CE HE2 sing N N 339 MET CE HE3 sing N N 340 MET OXT HXT sing N N 341 PHE N CA sing N N 342 PHE N H sing N N 343 PHE N H2 sing N N 344 PHE CA C sing N N 345 PHE CA CB sing N N 346 PHE CA HA sing N N 347 PHE C O doub N N 348 PHE C OXT sing N N 349 PHE CB CG sing N N 350 PHE CB HB2 sing N N 351 PHE CB HB3 sing N N 352 PHE CG CD1 doub Y N 353 PHE CG CD2 sing Y N 354 PHE CD1 CE1 sing Y N 355 PHE CD1 HD1 sing N N 356 PHE CD2 CE2 doub Y N 357 PHE CD2 HD2 sing N N 358 PHE CE1 CZ doub Y N 359 PHE CE1 HE1 sing N N 360 PHE CE2 CZ sing Y N 361 PHE CE2 HE2 sing N N 362 PHE CZ HZ sing N N 363 PHE OXT HXT sing N N 364 PO4 P O1 doub N N 365 PO4 P O2 sing N N 366 PO4 P O3 sing N N 367 PO4 P O4 sing N N 368 PRO N CA sing N N 369 PRO N CD sing N N 370 PRO N H sing N N 371 PRO CA C sing N N 372 PRO CA CB sing N N 373 PRO CA HA sing N N 374 PRO C O doub N N 375 PRO C OXT sing N N 376 PRO CB CG sing N N 377 PRO CB HB2 sing N N 378 PRO CB HB3 sing N N 379 PRO CG CD sing N N 380 PRO CG HG2 sing N N 381 PRO CG HG3 sing N N 382 PRO CD HD2 sing N N 383 PRO CD HD3 sing N N 384 PRO OXT HXT sing N N 385 SER N CA sing N N 386 SER N H sing N N 387 SER N H2 sing N N 388 SER CA C sing N N 389 SER CA CB sing N N 390 SER CA HA sing N N 391 SER C O doub N N 392 SER C OXT sing N N 393 SER CB OG sing N N 394 SER CB HB2 sing N N 395 SER CB HB3 sing N N 396 SER OG HG sing N N 397 SER OXT HXT sing N N 398 THR N CA sing N N 399 THR N H sing N N 400 THR N H2 sing N N 401 THR CA C sing N N 402 THR CA CB sing N N 403 THR CA HA sing N N 404 THR C O doub N N 405 THR C OXT sing N N 406 THR CB OG1 sing N N 407 THR CB CG2 sing N N 408 THR CB HB sing N N 409 THR OG1 HG1 sing N N 410 THR CG2 HG21 sing N N 411 THR CG2 HG22 sing N N 412 THR CG2 HG23 sing N N 413 THR OXT HXT sing N N 414 TRP N CA sing N N 415 TRP N H sing N N 416 TRP N H2 sing N N 417 TRP CA C sing N N 418 TRP CA CB sing N N 419 TRP CA HA sing N N 420 TRP C O doub N N 421 TRP C OXT sing N N 422 TRP CB CG sing N N 423 TRP CB HB2 sing N N 424 TRP CB HB3 sing N N 425 TRP CG CD1 doub Y N 426 TRP CG CD2 sing Y N 427 TRP CD1 NE1 sing Y N 428 TRP CD1 HD1 sing N N 429 TRP CD2 CE2 doub Y N 430 TRP CD2 CE3 sing Y N 431 TRP NE1 CE2 sing Y N 432 TRP NE1 HE1 sing N N 433 TRP CE2 CZ2 sing Y N 434 TRP CE3 CZ3 doub Y N 435 TRP CE3 HE3 sing N N 436 TRP CZ2 CH2 doub Y N 437 TRP CZ2 HZ2 sing N N 438 TRP CZ3 CH2 sing Y N 439 TRP CZ3 HZ3 sing N N 440 TRP CH2 HH2 sing N N 441 TRP OXT HXT sing N N 442 TYR N CA sing N N 443 TYR N H sing N N 444 TYR N H2 sing N N 445 TYR CA C sing N N 446 TYR CA CB sing N N 447 TYR CA HA sing N N 448 TYR C O doub N N 449 TYR C OXT sing N N 450 TYR CB CG sing N N 451 TYR CB HB2 sing N N 452 TYR CB HB3 sing N N 453 TYR CG CD1 doub Y N 454 TYR CG CD2 sing Y N 455 TYR CD1 CE1 sing Y N 456 TYR CD1 HD1 sing N N 457 TYR CD2 CE2 doub Y N 458 TYR CD2 HD2 sing N N 459 TYR CE1 CZ doub Y N 460 TYR CE1 HE1 sing N N 461 TYR CE2 CZ sing Y N 462 TYR CE2 HE2 sing N N 463 TYR CZ OH sing N N 464 TYR OH HH sing N N 465 TYR OXT HXT sing N N 466 VAL N CA sing N N 467 VAL N H sing N N 468 VAL N H2 sing N N 469 VAL CA C sing N N 470 VAL CA CB sing N N 471 VAL CA HA sing N N 472 VAL C O doub N N 473 VAL C OXT sing N N 474 VAL CB CG1 sing N N 475 VAL CB CG2 sing N N 476 VAL CB HB sing N N 477 VAL CG1 HG11 sing N N 478 VAL CG1 HG12 sing N N 479 VAL CG1 HG13 sing N N 480 VAL CG2 HG21 sing N N 481 VAL CG2 HG22 sing N N 482 VAL CG2 HG23 sing N N 483 VAL OXT HXT sing N N 484 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 'PHOSPHATE ION' PO4 4 GLYCEROL GOL 5 IMIDAZOLE IMD 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2VEB _pdbx_initial_refinement_model.details 'PDB ENTRY 2VEB' #