HEADER METAL TRANSPORT 22-JAN-13 3ZKA TITLE CRYSTAL STRUCTURE OF PNEUMOCOCCAL SURFACE ANTIGEN PSAA D280N IN THE TITLE 2 METAL-BOUND, OPEN STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANGANESE ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 32-309; COMPND 5 SYNONYM: PSAA, PNEUMOCOCCAL SURFACE ADHESIN A; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS METAL TRANSPORT, ATP-BINDING CASSETTE TRANSPORTERS, BACTERIAL KEYWDS 2 ADHESION, CARRIER PROTEINS, LIPOPROTEINS, MEMBRANE TRANSPORT KEYWDS 3 PROTEINS EXPDTA X-RAY DIFFRACTION AUTHOR R.M.COUNAGO,M.P.WEEN,M.BAJAJ,J.ZUEGG,M.A.COOPER,A.G.MCEWAN,J.C.PATON, AUTHOR 2 B.KOBE,C.A.MCDEVITT REVDAT 7 20-DEC-23 3ZKA 1 REMARK LINK REVDAT 6 06-MAR-19 3ZKA 1 REMARK REVDAT 5 28-MAR-18 3ZKA 1 AUTHOR JRNL ATOM REVDAT 4 08-JAN-14 3ZKA 1 JRNL REVDAT 3 20-NOV-13 3ZKA 1 JRNL REVDAT 2 13-NOV-13 3ZKA 1 JRNL REVDAT 1 06-NOV-13 3ZKA 0 JRNL AUTH R.M.COUNAGO,M.P.WEEN,S.L.BEGG,M.BAJAJ,J.ZUEGG,M.L.O'MARA, JRNL AUTH 2 M.A.COOPER,A.G.MCEWAN,J.C.PATON,B.KOBE,C.A.MCDEVITT JRNL TITL IMPERFECT COORDINATION CHEMISTRY FACILITATES METAL ION JRNL TITL 2 RELEASE IN THE PSA PERMEASE. JRNL REF NAT. CHEM. BIOL. V. 10 35 2014 JRNL REFN ESSN 1552-4469 JRNL PMID 24212134 JRNL DOI 10.1038/NCHEMBIO.1382 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.C.LAWRENCE,P.A.PILLING,V.C.EPA,A.M.BERRY,A.D.OGUNNIYI, REMARK 1 AUTH 2 J.C.PATON REMARK 1 TITL THE CRYSTAL STRUCTURE OF PNEUMOCOCCAL SURFACE ANTIGEN PSAA REMARK 1 TITL 2 REVEALS A METAL-BINDING SITE AND A NOVEL STRUCTURE FOR A REMARK 1 TITL 3 PUTATIVE ABC-TYPE BINDING PROTEIN. REMARK 1 REF STRUCTURE V. 6 1553 1998 REMARK 1 REFN ISSN 0969-2126 REMARK 1 PMID 9862808 REMARK 1 DOI 10.1016/S0969-2126(98)00153-1 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.A.MCDEVITT,A.D.OGUNNIYI,E.VALKOV,M.C.LAWRENCE,B.KOBE, REMARK 1 AUTH 2 A.G.MCEWAN,J.C.PATON REMARK 1 TITL A MOLECULAR MECHANISM FOR BACTERIAL SUSCEPTIBILITY TO ZINC. REMARK 1 REF PLOS PATHOG. V. 7 02357 2011 REMARK 1 REFN ISSN 1553-7366 REMARK 1 PMID 22072971 REMARK 1 DOI 10.1371/JOURNAL.PPAT.1002357 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 71639 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 3615 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.59 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.86 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 5267 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2097 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4999 REMARK 3 BIN R VALUE (WORKING SET) : 0.2080 REMARK 3 BIN FREE R VALUE : 0.2427 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.09 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 268 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4434 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 543 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.59740 REMARK 3 B22 (A**2) : 0.85060 REMARK 3 B33 (A**2) : 0.74680 REMARK 3 B12 (A**2) : -0.22390 REMARK 3 B13 (A**2) : -0.13160 REMARK 3 B23 (A**2) : 1.64240 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.194 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.079 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.081 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.100 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.082 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 8970 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 16320 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2556 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 150 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1226 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 8970 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 3 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 602 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 10107 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.27 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.92 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 4.7036 -3.9500 38.3009 REMARK 3 T TENSOR REMARK 3 T11: -0.0939 T22: -0.1045 REMARK 3 T33: -0.0942 T12: 0.0087 REMARK 3 T13: 0.0304 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.8752 L22: 1.3635 REMARK 3 L33: 1.3798 L12: -0.3693 REMARK 3 L13: -0.5437 L23: 0.0141 REMARK 3 S TENSOR REMARK 3 S11: -0.2119 S12: -0.0423 S13: -0.0887 REMARK 3 S21: 0.0390 S22: 0.0817 S23: -0.0807 REMARK 3 S31: 0.2307 S32: 0.0905 S33: 0.1302 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 4.4379 -19.6737 8.5814 REMARK 3 T TENSOR REMARK 3 T11: -0.0983 T22: -0.0502 REMARK 3 T33: -0.0457 T12: 0.0151 REMARK 3 T13: -0.0024 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 0.1876 L22: 1.7254 REMARK 3 L33: 1.0276 L12: 0.2447 REMARK 3 L13: -0.1359 L23: 0.2449 REMARK 3 S TENSOR REMARK 3 S11: -0.0142 S12: -0.0202 S13: 0.0018 REMARK 3 S21: -0.0455 S22: 0.0788 S23: -0.1865 REMARK 3 S31: -0.1103 S32: 0.0867 S33: -0.0646 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=MN. NUMBER OF REMARK 3 ATOMS WITH PROPER CCP4 ATOM TYPE=9429. NUMBER WITH APPROX REMARK 3 DEFAULT CCP4 ATOM TYPE=0. NUMBER TREATED BY BAD NON-BONDED REMARK 3 CONTACTS=2. REMARK 4 REMARK 4 3ZKA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1290055523. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95369 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 (SI111) REMARK 200 OPTICS : SILICON MIRRORS (ADAPTIVE AND U REMARK 200 -BENT) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71639 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 22.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.46000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1PSZ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.5% W/V PEG 1,000 12.5% W/V PEG REMARK 280 3,350, 12.5% V/V MPD; 0.1 M TRIZMA/BICINE PH 8.7 AFTER 7-10 DAYS REMARK 280 AT 293 K, FOLLOWING STREAK-SEEDING OF PRE-EQUILIBRATED (24 HOURS) REMARK 280 DROPS REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 90 45.13 39.47 REMARK 500 LYS A 113 -56.14 -127.28 REMARK 500 HIS A 139 45.30 -79.64 REMARK 500 THR A 279 -66.54 -131.93 REMARK 500 ILE B 90 45.43 39.43 REMARK 500 LYS B 113 -56.75 -127.67 REMARK 500 HIS B 139 44.08 -82.42 REMARK 500 THR B 279 -60.87 -132.75 REMARK 500 ASP B 290 30.39 -82.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2093 DISTANCE = 6.29 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1310 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 139 NE2 REMARK 620 2 GLU A 205 OE1 114.8 REMARK 620 3 GLU A 205 OE2 112.8 51.2 REMARK 620 4 HOH A2156 O 89.2 113.1 61.9 REMARK 620 5 HOH A2157 O 93.9 89.2 138.4 153.7 REMARK 620 6 HOH A2158 O 87.2 157.4 117.1 59.4 94.7 REMARK 620 7 HOH A2204 O 164.1 80.9 74.4 81.8 88.7 77.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1310 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 139 NE2 REMARK 620 2 GLU B 205 OE1 98.0 REMARK 620 3 GLU B 205 OE2 104.6 46.6 REMARK 620 4 HOH B2117 O 93.9 139.3 92.7 REMARK 620 5 HOH B2118 O 92.2 74.5 120.0 143.8 REMARK 620 6 HOH B2119 O 90.0 145.2 160.4 73.0 71.3 REMARK 620 7 HOH B2172 O 173.0 88.2 77.4 79.3 92.5 86.6 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS B 1311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 1311 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZK7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PNEUMOCOCCAL SURFACE ANTIGEN PSAA IN THE METAL- REMARK 900 FREE, OPEN STATE REMARK 900 RELATED ID: 3ZK8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PNEUMOCOCCAL SURFACE ANTIGEN PSAA E205Q IN THE REMARK 900 METAL-FREE, OPEN STATE REMARK 900 RELATED ID: 3ZK9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PNEUMOCOCCAL SURFACE ANTIGEN PSAA D280N IN THE REMARK 900 METAL-FREE, OPEN STATE REMARK 900 RELATED ID: 3ZTT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PNEUMOCOCCAL SURFACE ANTIGEN PSAA WITH REMARK 900 MANGANESE DBREF 3ZKA A 32 309 UNP P0A4G2 MTSA_STRPN 32 309 DBREF 3ZKA B 32 309 UNP P0A4G2 MTSA_STRPN 32 309 SEQADV 3ZKA ASN A 280 UNP P0A4G2 ASP 280 ENGINEERED MUTATION SEQADV 3ZKA ASN B 280 UNP P0A4G2 ASP 280 ENGINEERED MUTATION SEQRES 1 A 278 LYS LEU LYS VAL VAL ALA THR ASN SER ILE ILE ALA ASP SEQRES 2 A 278 ILE THR LYS ASN ILE ALA GLY ASP LYS ILE ASP LEU HIS SEQRES 3 A 278 SER ILE VAL PRO ILE GLY GLN ASP PRO HIS GLU TYR GLU SEQRES 4 A 278 PRO LEU PRO GLU ASP VAL LYS LYS THR SER GLU ALA ASP SEQRES 5 A 278 LEU ILE PHE TYR ASN GLY ILE ASN LEU GLU THR GLY GLY SEQRES 6 A 278 ASN ALA TRP PHE THR LYS LEU VAL GLU ASN ALA LYS LYS SEQRES 7 A 278 THR GLU ASN LYS ASP TYR PHE ALA VAL SER ASP GLY VAL SEQRES 8 A 278 ASP VAL ILE TYR LEU GLU GLY GLN ASN GLU LYS GLY LYS SEQRES 9 A 278 GLU ASP PRO HIS ALA TRP LEU ASN LEU GLU ASN GLY ILE SEQRES 10 A 278 ILE PHE ALA LYS ASN ILE ALA LYS GLN LEU SER ALA LYS SEQRES 11 A 278 ASP PRO ASN ASN LYS GLU PHE TYR GLU LYS ASN LEU LYS SEQRES 12 A 278 GLU TYR THR ASP LYS LEU ASP LYS LEU ASP LYS GLU SER SEQRES 13 A 278 LYS ASP LYS PHE ASN LYS ILE PRO ALA GLU LYS LYS LEU SEQRES 14 A 278 ILE VAL THR SER GLU GLY ALA PHE LYS TYR PHE SER LYS SEQRES 15 A 278 ALA TYR GLY VAL PRO SER ALA TYR ILE TRP GLU ILE ASN SEQRES 16 A 278 THR GLU GLU GLU GLY THR PRO GLU GLN ILE LYS THR LEU SEQRES 17 A 278 VAL GLU LYS LEU ARG GLN THR LYS VAL PRO SER LEU PHE SEQRES 18 A 278 VAL GLU SER SER VAL ASP ASP ARG PRO MET LYS THR VAL SEQRES 19 A 278 SER GLN ASP THR ASN ILE PRO ILE TYR ALA GLN ILE PHE SEQRES 20 A 278 THR ASN SER ILE ALA GLU GLN GLY LYS GLU GLY ASP SER SEQRES 21 A 278 TYR TYR SER MET MET LYS TYR ASN LEU ASP LYS ILE ALA SEQRES 22 A 278 GLU GLY LEU ALA LYS SEQRES 1 B 278 LYS LEU LYS VAL VAL ALA THR ASN SER ILE ILE ALA ASP SEQRES 2 B 278 ILE THR LYS ASN ILE ALA GLY ASP LYS ILE ASP LEU HIS SEQRES 3 B 278 SER ILE VAL PRO ILE GLY GLN ASP PRO HIS GLU TYR GLU SEQRES 4 B 278 PRO LEU PRO GLU ASP VAL LYS LYS THR SER GLU ALA ASP SEQRES 5 B 278 LEU ILE PHE TYR ASN GLY ILE ASN LEU GLU THR GLY GLY SEQRES 6 B 278 ASN ALA TRP PHE THR LYS LEU VAL GLU ASN ALA LYS LYS SEQRES 7 B 278 THR GLU ASN LYS ASP TYR PHE ALA VAL SER ASP GLY VAL SEQRES 8 B 278 ASP VAL ILE TYR LEU GLU GLY GLN ASN GLU LYS GLY LYS SEQRES 9 B 278 GLU ASP PRO HIS ALA TRP LEU ASN LEU GLU ASN GLY ILE SEQRES 10 B 278 ILE PHE ALA LYS ASN ILE ALA LYS GLN LEU SER ALA LYS SEQRES 11 B 278 ASP PRO ASN ASN LYS GLU PHE TYR GLU LYS ASN LEU LYS SEQRES 12 B 278 GLU TYR THR ASP LYS LEU ASP LYS LEU ASP LYS GLU SER SEQRES 13 B 278 LYS ASP LYS PHE ASN LYS ILE PRO ALA GLU LYS LYS LEU SEQRES 14 B 278 ILE VAL THR SER GLU GLY ALA PHE LYS TYR PHE SER LYS SEQRES 15 B 278 ALA TYR GLY VAL PRO SER ALA TYR ILE TRP GLU ILE ASN SEQRES 16 B 278 THR GLU GLU GLU GLY THR PRO GLU GLN ILE LYS THR LEU SEQRES 17 B 278 VAL GLU LYS LEU ARG GLN THR LYS VAL PRO SER LEU PHE SEQRES 18 B 278 VAL GLU SER SER VAL ASP ASP ARG PRO MET LYS THR VAL SEQRES 19 B 278 SER GLN ASP THR ASN ILE PRO ILE TYR ALA GLN ILE PHE SEQRES 20 B 278 THR ASN SER ILE ALA GLU GLN GLY LYS GLU GLY ASP SER SEQRES 21 B 278 TYR TYR SER MET MET LYS TYR ASN LEU ASP LYS ILE ALA SEQRES 22 B 278 GLU GLY LEU ALA LYS HET MN A1310 1 HET TRS A1311 20 HET MN B1310 1 HET TRS B1311 20 HETNAM MN MANGANESE (II) ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN TRS TRIS BUFFER FORMUL 3 MN 2(MN 2+) FORMUL 4 TRS 2(C4 H12 N O3 1+) FORMUL 7 HOH *543(H2 O) HELIX 1 1 ASN A 39 GLY A 51 1 13 HELIX 2 2 LEU A 72 ALA A 82 1 11 HELIX 3 3 ALA A 98 LYS A 108 1 11 HELIX 4 4 LEU A 127 GLN A 130 5 4 HELIX 5 5 HIS A 139 LEU A 142 5 4 HELIX 6 6 ASN A 143 ASP A 162 1 20 HELIX 7 7 ASN A 165 ILE A 194 1 30 HELIX 8 8 PRO A 195 LYS A 199 5 5 HELIX 9 9 PHE A 208 GLY A 216 1 9 HELIX 10 10 THR A 232 ARG A 244 1 13 HELIX 11 11 ASP A 259 ASN A 270 1 12 HELIX 12 12 SER A 291 ALA A 308 1 18 HELIX 13 13 ASN B 39 GLY B 51 1 13 HELIX 14 14 LEU B 72 ALA B 82 1 11 HELIX 15 15 ALA B 98 ALA B 107 1 10 HELIX 16 16 LEU B 127 GLN B 130 5 4 HELIX 17 17 HIS B 139 LEU B 142 5 4 HELIX 18 18 ASN B 143 ASP B 162 1 20 HELIX 19 19 ASN B 165 ILE B 194 1 30 HELIX 20 20 PRO B 195 LYS B 199 5 5 HELIX 21 21 PHE B 208 GLY B 216 1 9 HELIX 22 22 THR B 232 ARG B 244 1 13 HELIX 23 23 ASP B 259 ASN B 270 1 12 HELIX 24 24 SER B 291 ALA B 308 1 18 SHEET 1 AA 4 ILE A 54 SER A 58 0 SHEET 2 AA 4 LEU A 33 ALA A 37 1 O LEU A 33 N ASP A 55 SHEET 3 AA 4 LEU A 84 TYR A 87 1 O LEU A 84 N VAL A 36 SHEET 4 AA 4 TYR A 115 ALA A 117 1 O PHE A 116 N TYR A 87 SHEET 1 AB 2 ILE A 201 GLU A 205 0 SHEET 2 AB 2 SER A 219 TRP A 223 1 O ALA A 220 N THR A 203 SHEET 1 AC 2 LEU A 251 GLU A 254 0 SHEET 2 AC 2 ILE A 273 ILE A 277 1 N TYR A 274 O LEU A 251 SHEET 1 BA 4 ILE B 54 SER B 58 0 SHEET 2 BA 4 LEU B 33 ALA B 37 1 O LEU B 33 N ASP B 55 SHEET 3 BA 4 LEU B 84 TYR B 87 1 O LEU B 84 N VAL B 36 SHEET 4 BA 4 TYR B 115 ALA B 117 1 O PHE B 116 N TYR B 87 SHEET 1 BB 2 ILE B 201 GLU B 205 0 SHEET 2 BB 2 SER B 219 TRP B 223 1 O ALA B 220 N THR B 203 SHEET 1 BC 2 LEU B 251 GLU B 254 0 SHEET 2 BC 2 ILE B 273 ILE B 277 1 N TYR B 274 O LEU B 251 LINK NE2 HIS A 139 MN MN A1310 1555 1555 2.30 LINK OE1 GLU A 205 MN MN A1310 1555 1555 2.29 LINK OE2 GLU A 205 MN MN A1310 1555 1555 2.73 LINK MN MN A1310 O HOH A2156 1555 1555 2.70 LINK MN MN A1310 O HOH A2157 1555 1555 2.29 LINK MN MN A1310 O HOH A2158 1555 1555 2.29 LINK MN MN A1310 O HOH A2204 1555 1555 2.30 LINK NE2 HIS B 139 MN MN B1310 1555 1555 2.30 LINK OE1 GLU B 205 MN MN B1310 1555 1555 2.75 LINK OE2 GLU B 205 MN MN B1310 1555 1555 2.74 LINK MN MN B1310 O HOH B2117 1555 1555 2.10 LINK MN MN B1310 O HOH B2118 1555 1555 2.29 LINK MN MN B1310 O HOH B2119 1555 1555 2.48 LINK MN MN B1310 O HOH B2172 1555 1555 2.30 SITE 1 AC1 6 HIS A 139 GLU A 205 HOH A2156 HOH A2157 SITE 2 AC1 6 HOH A2158 HOH A2204 SITE 1 AC2 6 HIS B 139 GLU B 205 HOH B2117 HOH B2118 SITE 2 AC2 6 HOH B2119 HOH B2172 SITE 1 AC3 10 ILE A 62 GLY A 63 GLN A 64 HIS B 57 SITE 2 AC3 10 SER B 58 ILE B 59 TYR B 69 GLU B 74 SITE 3 AC3 10 ASP B 75 HOH B2018 SITE 1 AC4 8 SER A 58 ILE A 59 TYR A 69 LEU A 72 SITE 2 AC4 8 GLU A 74 ASP A 75 ILE B 62 GLN B 64 CRYST1 39.524 58.960 62.130 106.18 104.49 94.39 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025301 0.001942 0.007504 0.00000 SCALE2 0.000000 0.017011 0.005517 0.00000 SCALE3 0.000000 0.000000 0.017476 0.00000 MTRIX1 1 1.000000 0.028000 -0.005000 0.85400 1 MTRIX2 1 0.027000 -0.999000 -0.025000 -23.52100 1 MTRIX3 1 -0.006000 0.025000 -1.000000 47.38900 1