data_3ZPJ # _entry.id 3ZPJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3ZPJ PDBE EBI-55988 WWPDB D_1290055988 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZPJ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-02-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jeong, J.H.' 1 'kim, Y.G.' 2 # _citation.id primary _citation.title ;Structure of the Hypothetical Protein Ton1535 from Thermococcus Onnurineus Na1 Reveals Unique Structural Properties by a Left-Handed Helical Turn in Normal Alpha-Solenoid Protein. ; _citation.journal_abbrev Proteins _citation.journal_volume 82 _citation.page_first 1072 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24265202 _citation.pdbx_database_id_DOI 10.1002/PROT.24444 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jeong, J.' 1 primary 'Kim, Y.' 2 primary 'Rojvirija, C.' 3 primary 'Cha, H.J.' 4 primary 'Kim, Y.' 5 primary 'Ha, S.C.' 6 # _cell.entry_id 3ZPJ _cell.length_a 117.954 _cell.length_b 117.954 _cell.length_c 208.232 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZPJ _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man TON_1535 40954.312 1 ? ? ? ? 2 water nat water 18.015 8 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSII ASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILR IGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSG VMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIA LELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIEESQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSII ASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILR IGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSG VMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIA LELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIEESQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 THR n 1 4 LEU n 1 5 GLU n 1 6 GLU n 1 7 ILE n 1 8 ASN n 1 9 LEU n 1 10 LEU n 1 11 VAL n 1 12 GLU n 1 13 ARG n 1 14 GLY n 1 15 TYR n 1 16 TYR n 1 17 GLU n 1 18 GLU n 1 19 ALA n 1 20 LEU n 1 21 ALA n 1 22 LYS n 1 23 VAL n 1 24 TYR n 1 25 GLU n 1 26 ILE n 1 27 GLU n 1 28 ASP n 1 29 PRO n 1 30 ILE n 1 31 GLU n 1 32 GLN n 1 33 VAL n 1 34 GLN n 1 35 VAL n 1 36 LEU n 1 37 THR n 1 38 LYS n 1 39 ILE n 1 40 VAL n 1 41 VAL n 1 42 THR n 1 43 ILE n 1 44 TYR n 1 45 GLN n 1 46 HIS n 1 47 ASP n 1 48 GLY n 1 49 PRO n 1 50 MET n 1 51 GLU n 1 52 TRP n 1 53 ILE n 1 54 PRO n 1 55 SER n 1 56 ILE n 1 57 MET n 1 58 GLU n 1 59 ASP n 1 60 ALA n 1 61 MET n 1 62 TYR n 1 63 ILE n 1 64 ALA n 1 65 LYS n 1 66 LYS n 1 67 LEU n 1 68 ARG n 1 69 ASP n 1 70 PRO n 1 71 ALA n 1 72 ASN n 1 73 LYS n 1 74 ALA n 1 75 VAL n 1 76 ALA n 1 77 TYR n 1 78 SER n 1 79 ILE n 1 80 ILE n 1 81 ALA n 1 82 SER n 1 83 THR n 1 84 LEU n 1 85 ALA n 1 86 ILE n 1 87 MET n 1 88 GLU n 1 89 TYR n 1 90 GLU n 1 91 GLU n 1 92 ASP n 1 93 ALA n 1 94 MET n 1 95 ASP n 1 96 PHE n 1 97 PHE n 1 98 ASN n 1 99 ARG n 1 100 ALA n 1 101 ILE n 1 102 ASP n 1 103 GLU n 1 104 ALA n 1 105 ASN n 1 106 GLU n 1 107 ILE n 1 108 GLU n 1 109 SER n 1 110 PRO n 1 111 ILE n 1 112 GLU n 1 113 LYS n 1 114 GLY n 1 115 MET n 1 116 VAL n 1 117 LEU n 1 118 SER n 1 119 THR n 1 120 LEU n 1 121 ALA n 1 122 TYR n 1 123 HIS n 1 124 LEU n 1 125 ALA n 1 126 ILE n 1 127 ALA n 1 128 GLY n 1 129 TYR n 1 130 PRO n 1 131 ASP n 1 132 ASN n 1 133 ALA n 1 134 LEU n 1 135 GLU n 1 136 ILE n 1 137 PHE n 1 138 ASN n 1 139 ILE n 1 140 ALA n 1 141 PHE n 1 142 ASP n 1 143 THR n 1 144 ILE n 1 145 ILE n 1 146 GLY n 1 147 ALA n 1 148 GLU n 1 149 THR n 1 150 SER n 1 151 TYR n 1 152 THR n 1 153 HIS n 1 154 LYS n 1 155 VAL n 1 156 ASP n 1 157 GLY n 1 158 ILE n 1 159 LEU n 1 160 ARG n 1 161 ILE n 1 162 GLY n 1 163 ASP n 1 164 LEU n 1 165 LEU n 1 166 GLU n 1 167 LYS n 1 168 ALA n 1 169 GLY n 1 170 ASP n 1 171 THR n 1 172 LEU n 1 173 PRO n 1 174 SER n 1 175 ASN n 1 176 GLU n 1 177 ALA n 1 178 MET n 1 179 ASP n 1 180 PHE n 1 181 TYR n 1 182 LYS n 1 183 MET n 1 184 ALA n 1 185 PHE n 1 186 ASP n 1 187 ILE n 1 188 PHE n 1 189 ASP n 1 190 LYS n 1 191 LEU n 1 192 HIS n 1 193 VAL n 1 194 ASN n 1 195 GLN n 1 196 ARG n 1 197 ALA n 1 198 ALA n 1 199 ILE n 1 200 VAL n 1 201 GLU n 1 202 LYS n 1 203 LYS n 1 204 ILE n 1 205 GLU n 1 206 LEU n 1 207 ALA n 1 208 LYS n 1 209 THR n 1 210 VAL n 1 211 TYR n 1 212 ASP n 1 213 VAL n 1 214 GLY n 1 215 LEU n 1 216 PRO n 1 217 GLN n 1 218 ILE n 1 219 ARG n 1 220 ALA n 1 221 ALA n 1 222 LEU n 1 223 LEU n 1 224 LYS n 1 225 GLY n 1 226 LYS n 1 227 ASN n 1 228 HIS n 1 229 TYR n 1 230 ALA n 1 231 LEU n 1 232 ALA n 1 233 ILE n 1 234 ILE n 1 235 LYS n 1 236 LYS n 1 237 LYS n 1 238 TYR n 1 239 SER n 1 240 GLY n 1 241 VAL n 1 242 MET n 1 243 ARG n 1 244 LEU n 1 245 ILE n 1 246 GLY n 1 247 GLU n 1 248 LEU n 1 249 GLU n 1 250 VAL n 1 251 ALA n 1 252 LEU n 1 253 TRP n 1 254 MET n 1 255 LYS n 1 256 ARG n 1 257 VAL n 1 258 ASN n 1 259 ASN n 1 260 MET n 1 261 GLU n 1 262 TYR n 1 263 LEU n 1 264 ASP n 1 265 VAL n 1 266 VAL n 1 267 ASP n 1 268 LYS n 1 269 ALA n 1 270 PHE n 1 271 GLU n 1 272 CYS n 1 273 CYS n 1 274 GLU n 1 275 SER n 1 276 PRO n 1 277 ARG n 1 278 PHE n 1 279 THR n 1 280 ASP n 1 281 VAL n 1 282 ASN n 1 283 VAL n 1 284 GLN n 1 285 HIS n 1 286 ILE n 1 287 ALA n 1 288 ARG n 1 289 LEU n 1 290 LEU n 1 291 THR n 1 292 GLU n 1 293 LEU n 1 294 GLY n 1 295 ASN n 1 296 LEU n 1 297 ARG n 1 298 ARG n 1 299 ALA n 1 300 LEU n 1 301 LYS n 1 302 PHE n 1 303 ALA n 1 304 LYS n 1 305 GLU n 1 306 ILE n 1 307 GLN n 1 308 ASN n 1 309 ILE n 1 310 HIS n 1 311 LYS n 1 312 ARG n 1 313 SER n 1 314 GLU n 1 315 ALA n 1 316 LEU n 1 317 LYS n 1 318 ALA n 1 319 ILE n 1 320 ALA n 1 321 LEU n 1 322 GLU n 1 323 LEU n 1 324 VAL n 1 325 ARG n 1 326 ARG n 1 327 LYS n 1 328 LYS n 1 329 PHE n 1 330 GLU n 1 331 GLU n 1 332 VAL n 1 333 LYS n 1 334 LYS n 1 335 ILE n 1 336 ILE n 1 337 GLU n 1 338 SER n 1 339 ILE n 1 340 PRO n 1 341 ASP n 1 342 PRO n 1 343 LYS n 1 344 ILE n 1 345 ARG n 1 346 GLU n 1 347 GLU n 1 348 ALA n 1 349 LEU n 1 350 ASN n 1 351 GLU n 1 352 ILE n 1 353 GLY n 1 354 THR n 1 355 ILE n 1 356 GLU n 1 357 GLU n 1 358 SER n 1 359 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain NA1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'THERMOCOCCUS ONNURINEUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 523850 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI B' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 37762 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3) RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET30A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B6YTT4_THEON _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession B6YTT4 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ZPJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 359 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B6YTT4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 359 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 359 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3ZPJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.71 _exptl_crystal.density_percent_sol 64 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M BIS-TRIS PROPANE (PH7.0), 1.2 M POTASSIUM SODIUM TARTRATE TETRAHYDRATE' # _diffrn.id 1 _diffrn.ambient_temp 295 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-06-14 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PAL/PLS BEAMLINE 5C (4A)' _diffrn_source.pdbx_synchrotron_site PAL/PLS _diffrn_source.pdbx_synchrotron_beamline '5C (4A)' _diffrn_source.pdbx_wavelength 0.9795 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3ZPJ _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 2.30 _reflns.number_obs 24870 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 45.50 _reflns.B_iso_Wilson_estimate 41.33 _reflns.pdbx_redundancy 9.1 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.39 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.28 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 9.70 _reflns_shell.pdbx_redundancy 6.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ZPJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 24870 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.29 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.911 _refine.ls_d_res_high 2.304 _refine.ls_percent_reflns_obs 99.69 _refine.ls_R_factor_obs 0.1969 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1943 _refine.ls_R_factor_R_free 0.2459 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1268 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 55.5 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.29 _refine.pdbx_overall_phase_error 24.72 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2850 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 2858 _refine_hist.d_res_high 2.304 _refine_hist.d_res_low 29.911 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 2898 'X-RAY DIFFRACTION' ? f_angle_d 1.139 ? ? 3911 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.419 ? ? 1106 'X-RAY DIFFRACTION' ? f_chiral_restr 0.076 ? ? 450 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 498 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.3036 2.3958 2572 0.2635 100.00 0.3071 . . 137 . . 'X-RAY DIFFRACTION' . 2.3958 2.5048 2623 0.2519 99.00 0.3157 . . 133 . . 'X-RAY DIFFRACTION' . 2.5048 2.6368 2584 0.2371 100.00 0.2840 . . 131 . . 'X-RAY DIFFRACTION' . 2.6368 2.8019 2596 0.2256 100.00 0.3025 . . 150 . . 'X-RAY DIFFRACTION' . 2.8019 3.0180 2595 0.2320 100.00 0.2770 . . 144 . . 'X-RAY DIFFRACTION' . 3.0180 3.3214 2597 0.2226 100.00 0.2858 . . 147 . . 'X-RAY DIFFRACTION' . 3.3214 3.8011 2622 0.1903 100.00 0.2402 . . 152 . . 'X-RAY DIFFRACTION' . 3.8011 4.7859 2659 0.1607 100.00 0.1934 . . 130 . . 'X-RAY DIFFRACTION' . 4.7859 29.9133 2754 0.1641 100.00 0.2138 . . 144 . . # _struct.entry_id 3ZPJ _struct.title 'Crystal structure of Ton1535 from Thermococcus onnurineus NA1' _struct.pdbx_descriptor TON_1535 _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZPJ _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'UNKNOWN FUNCTION, SOLENOID PROTEIN, HYPOTHETICAL PROTEIN, RIGHT-HANDED COILED COIL, LEFT-HANDED HELIX TURN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 1 ? ARG A 13 ? MET A 1 ARG A 13 1 ? 13 HELX_P HELX_P2 2 TYR A 15 ? VAL A 23 ? TYR A 15 VAL A 23 1 ? 9 HELX_P HELX_P3 3 TYR A 24 ? ILE A 26 ? TYR A 24 ILE A 26 5 ? 3 HELX_P HELX_P4 4 ASP A 28 ? HIS A 46 ? ASP A 28 HIS A 46 1 ? 19 HELX_P HELX_P5 5 PRO A 49 ? GLU A 51 ? PRO A 49 GLU A 51 5 ? 3 HELX_P HELX_P6 6 TRP A 52 ? LEU A 67 ? TRP A 52 LEU A 67 1 ? 16 HELX_P HELX_P7 7 ASP A 69 ? MET A 87 ? ASP A 69 MET A 87 1 ? 19 HELX_P HELX_P8 8 TYR A 89 ? ASN A 105 ? TYR A 89 ASN A 105 1 ? 17 HELX_P HELX_P9 9 SER A 109 ? ALA A 127 ? SER A 109 ALA A 127 1 ? 19 HELX_P HELX_P10 10 TYR A 129 ? ALA A 147 ? TYR A 129 ALA A 147 1 ? 19 HELX_P HELX_P11 11 SER A 150 ? THR A 171 ? SER A 150 THR A 171 1 ? 22 HELX_P HELX_P12 12 PRO A 173 ? LEU A 191 ? PRO A 173 LEU A 191 1 ? 19 HELX_P HELX_P13 13 VAL A 193 ? VAL A 210 ? VAL A 193 VAL A 210 1 ? 18 HELX_P HELX_P14 14 LEU A 215 ? LYS A 224 ? LEU A 215 LYS A 224 1 ? 10 HELX_P HELX_P15 15 LYS A 226 ? TYR A 238 ? LYS A 226 TYR A 238 1 ? 13 HELX_P HELX_P16 16 SER A 239 ? VAL A 257 ? SER A 239 VAL A 257 1 ? 19 HELX_P HELX_P17 17 GLU A 261 ? CYS A 272 ? GLU A 261 CYS A 272 1 ? 12 HELX_P HELX_P18 18 THR A 279 ? GLY A 294 ? THR A 279 GLY A 294 1 ? 16 HELX_P HELX_P19 19 ASN A 295 ? LYS A 304 ? ASN A 295 LYS A 304 1 ? 10 HELX_P HELX_P20 20 ASN A 308 ? ARG A 326 ? ASN A 308 ARG A 326 1 ? 19 HELX_P HELX_P21 21 LYS A 328 ? GLU A 330 ? LYS A 328 GLU A 330 5 ? 3 HELX_P HELX_P22 22 GLU A 331 ? ILE A 339 ? GLU A 331 ILE A 339 1 ? 9 HELX_P HELX_P23 23 ASP A 341 ? ILE A 352 ? ASP A 341 ILE A 352 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 272 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 273 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 272 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 273 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.043 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 3ZPJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ZPJ _atom_sites.fract_transf_matrix[1][1] 0.008478 _atom_sites.fract_transf_matrix[1][2] 0.004895 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009789 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004802 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 MET 50 50 50 MET MET A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 TRP 52 52 52 TRP TRP A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 MET 57 57 57 MET MET A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 MET 61 61 61 MET MET A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 MET 87 87 87 MET MET A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 MET 94 94 94 MET MET A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 MET 115 115 115 MET MET A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 HIS 123 123 123 HIS HIS A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 ASN 138 138 138 ASN ASN A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 TYR 151 151 151 TYR TYR A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 HIS 153 153 153 HIS HIS A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 ARG 160 160 160 ARG ARG A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 SER 174 174 174 SER SER A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 MET 178 178 178 MET MET A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 PHE 180 180 180 PHE PHE A . n A 1 181 TYR 181 181 181 TYR TYR A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 MET 183 183 183 MET MET A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 ASP 186 186 186 ASP ASP A . n A 1 187 ILE 187 187 187 ILE ILE A . n A 1 188 PHE 188 188 188 PHE PHE A . n A 1 189 ASP 189 189 189 ASP ASP A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 HIS 192 192 192 HIS HIS A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 GLN 195 195 195 GLN GLN A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 ILE 204 204 204 ILE ILE A . n A 1 205 GLU 205 205 205 GLU GLU A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 TYR 211 211 211 TYR TYR A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 GLY 214 214 214 GLY GLY A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 PRO 216 216 216 PRO PRO A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 ARG 219 219 219 ARG ARG A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 ALA 221 221 221 ALA ALA A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 LYS 224 224 224 LYS LYS A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 LYS 226 226 226 LYS LYS A . n A 1 227 ASN 227 227 227 ASN ASN A . n A 1 228 HIS 228 228 228 HIS HIS A . n A 1 229 TYR 229 229 229 TYR TYR A . n A 1 230 ALA 230 230 230 ALA ALA A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 ALA 232 232 232 ALA ALA A . n A 1 233 ILE 233 233 233 ILE ILE A . n A 1 234 ILE 234 234 234 ILE ILE A . n A 1 235 LYS 235 235 235 LYS LYS A . n A 1 236 LYS 236 236 236 LYS LYS A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 TYR 238 238 238 TYR TYR A . n A 1 239 SER 239 239 239 SER SER A . n A 1 240 GLY 240 240 240 GLY GLY A . n A 1 241 VAL 241 241 241 VAL VAL A . n A 1 242 MET 242 242 242 MET MET A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 ILE 245 245 245 ILE ILE A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 LEU 248 248 248 LEU LEU A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 ALA 251 251 251 ALA ALA A . n A 1 252 LEU 252 252 252 LEU LEU A . n A 1 253 TRP 253 253 253 TRP TRP A . n A 1 254 MET 254 254 254 MET MET A . n A 1 255 LYS 255 255 255 LYS LYS A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 VAL 257 257 257 VAL VAL A . n A 1 258 ASN 258 258 258 ASN ASN A . n A 1 259 ASN 259 259 259 ASN ASN A . n A 1 260 MET 260 260 260 MET MET A . n A 1 261 GLU 261 261 261 GLU GLU A . n A 1 262 TYR 262 262 262 TYR TYR A . n A 1 263 LEU 263 263 263 LEU LEU A . n A 1 264 ASP 264 264 264 ASP ASP A . n A 1 265 VAL 265 265 265 VAL VAL A . n A 1 266 VAL 266 266 266 VAL VAL A . n A 1 267 ASP 267 267 267 ASP ASP A . n A 1 268 LYS 268 268 268 LYS LYS A . n A 1 269 ALA 269 269 269 ALA ALA A . n A 1 270 PHE 270 270 270 PHE PHE A . n A 1 271 GLU 271 271 271 GLU GLU A . n A 1 272 CYS 272 272 272 CYS CYS A . n A 1 273 CYS 273 273 273 CYS CYS A . n A 1 274 GLU 274 274 274 GLU GLU A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 PRO 276 276 276 PRO PRO A . n A 1 277 ARG 277 277 277 ARG ARG A . n A 1 278 PHE 278 278 278 PHE PHE A . n A 1 279 THR 279 279 279 THR THR A . n A 1 280 ASP 280 280 280 ASP ASP A . n A 1 281 VAL 281 281 281 VAL VAL A . n A 1 282 ASN 282 282 282 ASN ASN A . n A 1 283 VAL 283 283 283 VAL VAL A . n A 1 284 GLN 284 284 284 GLN GLN A . n A 1 285 HIS 285 285 285 HIS HIS A . n A 1 286 ILE 286 286 286 ILE ILE A . n A 1 287 ALA 287 287 287 ALA ALA A . n A 1 288 ARG 288 288 288 ARG ARG A . n A 1 289 LEU 289 289 289 LEU LEU A . n A 1 290 LEU 290 290 290 LEU LEU A . n A 1 291 THR 291 291 291 THR THR A . n A 1 292 GLU 292 292 292 GLU GLU A . n A 1 293 LEU 293 293 293 LEU LEU A . n A 1 294 GLY 294 294 294 GLY GLY A . n A 1 295 ASN 295 295 295 ASN ASN A . n A 1 296 LEU 296 296 296 LEU LEU A . n A 1 297 ARG 297 297 297 ARG ARG A . n A 1 298 ARG 298 298 298 ARG ARG A . n A 1 299 ALA 299 299 299 ALA ALA A . n A 1 300 LEU 300 300 300 LEU LEU A . n A 1 301 LYS 301 301 301 LYS LYS A . n A 1 302 PHE 302 302 302 PHE PHE A . n A 1 303 ALA 303 303 303 ALA ALA A . n A 1 304 LYS 304 304 304 LYS LYS A . n A 1 305 GLU 305 305 305 GLU GLU A . n A 1 306 ILE 306 306 306 ILE ILE A . n A 1 307 GLN 307 307 307 GLN GLN A . n A 1 308 ASN 308 308 308 ASN ASN A . n A 1 309 ILE 309 309 309 ILE ILE A . n A 1 310 HIS 310 310 310 HIS HIS A . n A 1 311 LYS 311 311 311 LYS LYS A . n A 1 312 ARG 312 312 312 ARG ARG A . n A 1 313 SER 313 313 313 SER SER A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 LEU 316 316 316 LEU LEU A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 ALA 318 318 318 ALA ALA A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 ALA 320 320 320 ALA ALA A . n A 1 321 LEU 321 321 321 LEU LEU A . n A 1 322 GLU 322 322 322 GLU GLU A . n A 1 323 LEU 323 323 323 LEU LEU A . n A 1 324 VAL 324 324 324 VAL VAL A . n A 1 325 ARG 325 325 325 ARG ARG A . n A 1 326 ARG 326 326 326 ARG ARG A . n A 1 327 LYS 327 327 327 LYS LYS A . n A 1 328 LYS 328 328 328 LYS LYS A . n A 1 329 PHE 329 329 329 PHE PHE A . n A 1 330 GLU 330 330 330 GLU GLU A . n A 1 331 GLU 331 331 331 GLU GLU A . n A 1 332 VAL 332 332 332 VAL VAL A . n A 1 333 LYS 333 333 333 LYS LYS A . n A 1 334 LYS 334 334 334 LYS LYS A . n A 1 335 ILE 335 335 335 ILE ILE A . n A 1 336 ILE 336 336 336 ILE ILE A . n A 1 337 GLU 337 337 337 GLU GLU A . n A 1 338 SER 338 338 338 SER SER A . n A 1 339 ILE 339 339 339 ILE ILE A . n A 1 340 PRO 340 340 340 PRO PRO A . n A 1 341 ASP 341 341 341 ASP ASP A . n A 1 342 PRO 342 342 342 PRO PRO A . n A 1 343 LYS 343 343 343 LYS LYS A . n A 1 344 ILE 344 344 344 ILE ILE A . n A 1 345 ARG 345 345 345 ARG ARG A . n A 1 346 GLU 346 346 346 GLU GLU A . n A 1 347 GLU 347 347 347 GLU GLU A . n A 1 348 ALA 348 348 348 ALA ALA A . n A 1 349 LEU 349 349 349 LEU LEU A . n A 1 350 ASN 350 350 350 ASN ASN A . n A 1 351 GLU 351 351 351 GLU GLU A . n A 1 352 ILE 352 352 352 ILE ILE A . n A 1 353 GLY 353 353 353 GLY GLY A . n A 1 354 THR 354 354 354 THR THR A . n A 1 355 ILE 355 355 355 ILE ILE A . n A 1 356 GLU 356 356 356 GLU GLU A . n A 1 357 GLU 357 357 ? ? ? A . n A 1 358 SER 358 358 ? ? ? A . n A 1 359 GLN 359 359 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . B 2 HOH 5 2005 2005 HOH HOH A . B 2 HOH 6 2006 2006 HOH HOH A . B 2 HOH 7 2007 2007 HOH HOH A . B 2 HOH 8 2008 2008 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-04 2 'Structure model' 1 1 2014-01-29 3 'Structure model' 1 2 2014-05-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 13.2702 _pdbx_refine_tls.origin_y 12.7587 _pdbx_refine_tls.origin_z 41.1984 _pdbx_refine_tls.T[1][1] 0.2255 _pdbx_refine_tls.T[2][2] 0.2541 _pdbx_refine_tls.T[3][3] 0.3032 _pdbx_refine_tls.T[1][2] -0.0215 _pdbx_refine_tls.T[1][3] -0.0219 _pdbx_refine_tls.T[2][3] 0.0347 _pdbx_refine_tls.L[1][1] 1.7618 _pdbx_refine_tls.L[2][2] 1.7948 _pdbx_refine_tls.L[3][3] 1.6618 _pdbx_refine_tls.L[1][2] -0.4047 _pdbx_refine_tls.L[1][3] -0.7312 _pdbx_refine_tls.L[2][3] 0.6512 _pdbx_refine_tls.S[1][1] 0.0016 _pdbx_refine_tls.S[1][2] 0.1655 _pdbx_refine_tls.S[1][3] 0.2353 _pdbx_refine_tls.S[2][1] -0.1739 _pdbx_refine_tls.S[2][2] -0.0190 _pdbx_refine_tls.S[2][3] -0.2529 _pdbx_refine_tls.S[3][1] -0.0550 _pdbx_refine_tls.S[3][2] -0.0095 _pdbx_refine_tls.S[3][3] 0.0210 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ALL # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AutoSol phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 46 ? ? -108.17 40.56 2 1 ASP A 47 ? ? 36.32 45.64 3 1 PRO A 49 ? ? -65.96 94.39 4 1 ARG A 68 ? ? 77.64 -56.92 5 1 ASN A 105 ? ? -69.32 3.43 6 1 GLU A 148 ? ? -105.83 43.60 7 1 PRO A 276 ? ? -67.31 -178.58 8 1 LYS A 327 ? ? 61.34 -128.32 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 357 ? A GLU 357 2 1 Y 1 A SER 358 ? A SER 358 3 1 Y 1 A GLN 359 ? A GLN 359 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #