data_3BGK # _entry.id 3BGK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3BGK RCSB RCSB045493 WWPDB D_1000045493 # _pdbx_database_status.entry_id 3BGK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2007-11-26 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liang, Y.H.' 1 'Zhou, Y.F.' 2 'Yang, C.' 3 'Su, X.D.' 4 # _citation.id primary _citation.title ;The crystal structure of Streptococcus mutans protein SMU.573 solved from the anomalous signal measured with in-house chromium radiation ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Liang, Y.H.' 1 primary 'Zhou, Y.F.' 2 primary 'Li, L.F.' 3 primary 'Su, X.D.' 4 primary 'Yang, C.' 5 # _cell.length_a 96.527 _cell.length_b 96.527 _cell.length_c 56.260 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3BGK _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 4' _symmetry.entry_id 3BGK _symmetry.Int_Tables_number 79 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative uncharacterized protein' 34095.836 1 ? ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 4 water nat water 18.015 17 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name SMU.573 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGS(MSE)IIDDLLTKKIIKPRPLNSHKGTFGRVLLIGGNYPYGGAII (MSE)AALACVNSGAGLVTVATHKDNITALHSHLPEA(MSE)AFD(MSE)VEKDRLSEQITAADVVL(MSE)GPGLAEDD LAQTTFDVVWQAIEPKQTLIIDGSAINLLAKRKPAIWPTKQIILTPHQKEWERLSGLTIPEQIEAATQTALAHFPKETIL VAKSHQTKIYQGQKIGHIQVGGPYQATGG(MSE)GDTLAG(MSE)IAGFVAQFHTDRFEVAAAAVFLHSYIADQLSKEAY VVLPTRISAEITRV(MSE)KE(MSE)SE ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMIIDDLLTKKIIKPRPLNSHKGTFGRVLLIGGNYPYGGAIIMAALA CVNSGAGLVTVATHKDNITALHSHLPEAMAFDMVEKDRLSEQITAADVVLMGPGLAEDDLAQTTFDVVWQAIEPKQTLII DGSAINLLAKRKPAIWPTKQIILTPHQKEWERLSGLTIPEQIEAATQTALAHFPKETILVAKSHQTKIYQGQKIGHIQVG GPYQATGGMGDTLAGMIAGFVAQFHTDRFEVAAAAVFLHSYIADQLSKEAYVVLPTRISAEITRVMKEMSE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ALA n 1 23 SER n 1 24 MET n 1 25 THR n 1 26 GLY n 1 27 GLY n 1 28 GLN n 1 29 GLN n 1 30 MET n 1 31 GLY n 1 32 ARG n 1 33 GLY n 1 34 SER n 1 35 MSE n 1 36 ILE n 1 37 ILE n 1 38 ASP n 1 39 ASP n 1 40 LEU n 1 41 LEU n 1 42 THR n 1 43 LYS n 1 44 LYS n 1 45 ILE n 1 46 ILE n 1 47 LYS n 1 48 PRO n 1 49 ARG n 1 50 PRO n 1 51 LEU n 1 52 ASN n 1 53 SER n 1 54 HIS n 1 55 LYS n 1 56 GLY n 1 57 THR n 1 58 PHE n 1 59 GLY n 1 60 ARG n 1 61 VAL n 1 62 LEU n 1 63 LEU n 1 64 ILE n 1 65 GLY n 1 66 GLY n 1 67 ASN n 1 68 TYR n 1 69 PRO n 1 70 TYR n 1 71 GLY n 1 72 GLY n 1 73 ALA n 1 74 ILE n 1 75 ILE n 1 76 MSE n 1 77 ALA n 1 78 ALA n 1 79 LEU n 1 80 ALA n 1 81 CYS n 1 82 VAL n 1 83 ASN n 1 84 SER n 1 85 GLY n 1 86 ALA n 1 87 GLY n 1 88 LEU n 1 89 VAL n 1 90 THR n 1 91 VAL n 1 92 ALA n 1 93 THR n 1 94 HIS n 1 95 LYS n 1 96 ASP n 1 97 ASN n 1 98 ILE n 1 99 THR n 1 100 ALA n 1 101 LEU n 1 102 HIS n 1 103 SER n 1 104 HIS n 1 105 LEU n 1 106 PRO n 1 107 GLU n 1 108 ALA n 1 109 MSE n 1 110 ALA n 1 111 PHE n 1 112 ASP n 1 113 MSE n 1 114 VAL n 1 115 GLU n 1 116 LYS n 1 117 ASP n 1 118 ARG n 1 119 LEU n 1 120 SER n 1 121 GLU n 1 122 GLN n 1 123 ILE n 1 124 THR n 1 125 ALA n 1 126 ALA n 1 127 ASP n 1 128 VAL n 1 129 VAL n 1 130 LEU n 1 131 MSE n 1 132 GLY n 1 133 PRO n 1 134 GLY n 1 135 LEU n 1 136 ALA n 1 137 GLU n 1 138 ASP n 1 139 ASP n 1 140 LEU n 1 141 ALA n 1 142 GLN n 1 143 THR n 1 144 THR n 1 145 PHE n 1 146 ASP n 1 147 VAL n 1 148 VAL n 1 149 TRP n 1 150 GLN n 1 151 ALA n 1 152 ILE n 1 153 GLU n 1 154 PRO n 1 155 LYS n 1 156 GLN n 1 157 THR n 1 158 LEU n 1 159 ILE n 1 160 ILE n 1 161 ASP n 1 162 GLY n 1 163 SER n 1 164 ALA n 1 165 ILE n 1 166 ASN n 1 167 LEU n 1 168 LEU n 1 169 ALA n 1 170 LYS n 1 171 ARG n 1 172 LYS n 1 173 PRO n 1 174 ALA n 1 175 ILE n 1 176 TRP n 1 177 PRO n 1 178 THR n 1 179 LYS n 1 180 GLN n 1 181 ILE n 1 182 ILE n 1 183 LEU n 1 184 THR n 1 185 PRO n 1 186 HIS n 1 187 GLN n 1 188 LYS n 1 189 GLU n 1 190 TRP n 1 191 GLU n 1 192 ARG n 1 193 LEU n 1 194 SER n 1 195 GLY n 1 196 LEU n 1 197 THR n 1 198 ILE n 1 199 PRO n 1 200 GLU n 1 201 GLN n 1 202 ILE n 1 203 GLU n 1 204 ALA n 1 205 ALA n 1 206 THR n 1 207 GLN n 1 208 THR n 1 209 ALA n 1 210 LEU n 1 211 ALA n 1 212 HIS n 1 213 PHE n 1 214 PRO n 1 215 LYS n 1 216 GLU n 1 217 THR n 1 218 ILE n 1 219 LEU n 1 220 VAL n 1 221 ALA n 1 222 LYS n 1 223 SER n 1 224 HIS n 1 225 GLN n 1 226 THR n 1 227 LYS n 1 228 ILE n 1 229 TYR n 1 230 GLN n 1 231 GLY n 1 232 GLN n 1 233 LYS n 1 234 ILE n 1 235 GLY n 1 236 HIS n 1 237 ILE n 1 238 GLN n 1 239 VAL n 1 240 GLY n 1 241 GLY n 1 242 PRO n 1 243 TYR n 1 244 GLN n 1 245 ALA n 1 246 THR n 1 247 GLY n 1 248 GLY n 1 249 MSE n 1 250 GLY n 1 251 ASP n 1 252 THR n 1 253 LEU n 1 254 ALA n 1 255 GLY n 1 256 MSE n 1 257 ILE n 1 258 ALA n 1 259 GLY n 1 260 PHE n 1 261 VAL n 1 262 ALA n 1 263 GLN n 1 264 PHE n 1 265 HIS n 1 266 THR n 1 267 ASP n 1 268 ARG n 1 269 PHE n 1 270 GLU n 1 271 VAL n 1 272 ALA n 1 273 ALA n 1 274 ALA n 1 275 ALA n 1 276 VAL n 1 277 PHE n 1 278 LEU n 1 279 HIS n 1 280 SER n 1 281 TYR n 1 282 ILE n 1 283 ALA n 1 284 ASP n 1 285 GLN n 1 286 LEU n 1 287 SER n 1 288 LYS n 1 289 GLU n 1 290 ALA n 1 291 TYR n 1 292 VAL n 1 293 VAL n 1 294 LEU n 1 295 PRO n 1 296 THR n 1 297 ARG n 1 298 ILE n 1 299 SER n 1 300 ALA n 1 301 GLU n 1 302 ILE n 1 303 THR n 1 304 ARG n 1 305 VAL n 1 306 MSE n 1 307 LYS n 1 308 GLU n 1 309 MSE n 1 310 SER n 1 311 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SMU.573 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain UA159 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus mutans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1309 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET-28a (+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8DVC0_STRMU _struct_ref.pdbx_db_accession Q8DVC0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MIIDDLLTKKIIKPRPLNSHKGTFGRVLLIGGNYPYGGAIIMAALACVNSGAGLVTVATHKDNITALHSHLPEAMAFDMV EKDRLSEQITAADVVLMGPGLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINLLAKRKPAIWPTKQIILTPHQKEWERLS GLTIPEQIEAATQTALAHFPKETILVAKSHQTKIYQGQKIGHIQVGGPYQATGGMGDTLAGMIAGFVAQFHTDRFEVAAA AVFLHSYIADQLSKEAYVVLPTRISAEITRVMKEMSE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BGK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 35 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 311 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8DVC0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 277 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 277 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3BGK MET A 1 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -33 1 1 3BGK GLY A 2 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -32 2 1 3BGK SER A 3 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -31 3 1 3BGK SER A 4 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -30 4 1 3BGK HIS A 5 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -29 5 1 3BGK HIS A 6 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -28 6 1 3BGK HIS A 7 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -27 7 1 3BGK HIS A 8 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -26 8 1 3BGK HIS A 9 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -25 9 1 3BGK HIS A 10 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -24 10 1 3BGK SER A 11 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -23 11 1 3BGK SER A 12 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -22 12 1 3BGK GLY A 13 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -21 13 1 3BGK LEU A 14 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -20 14 1 3BGK VAL A 15 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -19 15 1 3BGK PRO A 16 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -18 16 1 3BGK ARG A 17 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -17 17 1 3BGK GLY A 18 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -16 18 1 3BGK SER A 19 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -15 19 1 3BGK HIS A 20 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -14 20 1 3BGK MET A 21 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -13 21 1 3BGK ALA A 22 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -12 22 1 3BGK SER A 23 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -11 23 1 3BGK MET A 24 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -10 24 1 3BGK THR A 25 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -9 25 1 3BGK GLY A 26 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -8 26 1 3BGK GLY A 27 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -7 27 1 3BGK GLN A 28 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -6 28 1 3BGK GLN A 29 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -5 29 1 3BGK MET A 30 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -4 30 1 3BGK GLY A 31 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -3 31 1 3BGK ARG A 32 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -2 32 1 3BGK GLY A 33 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' -1 33 1 3BGK SER A 34 ? UNP Q8DVC0 ? ? 'EXPRESSION TAG' 0 34 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3BGK _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.92 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 36.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.9 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;0.49M sodium phosphate monobasic monohydrate, 0.91M Potassium phosphate dibasic, pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2007-06-20 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'multilayers optics' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 2.2909 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 2.2909 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3BGK _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 25 _reflns.number_all ? _reflns.number_obs 8542 _reflns.percent_possible_obs 94.0 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_Rsym_value 0.053 _reflns.pdbx_netI_over_sigmaI 29.5 _reflns.B_iso_Wilson_estimate 39.7 _reflns.pdbx_redundancy 10.86 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 69.7 _reflns_shell.Rmerge_I_obs 0.078 _reflns_shell.meanI_over_sigI_obs 20.4 _reflns_shell.pdbx_Rsym_value 0.078 _reflns_shell.pdbx_redundancy 6.5 _reflns_shell.number_unique_all 629 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3BGK _refine.ls_d_res_high 2.500 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 93.980 _refine.ls_number_reflns_obs 8521 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_obs 0.210 _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.256 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 413 _refine.B_iso_mean 20.225 _refine.aniso_B[1][1] -0.990 _refine.aniso_B[2][2] -0.990 _refine.aniso_B[3][3] 1.980 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.917 _refine.correlation_coeff_Fo_to_Fc_free 0.869 _refine.pdbx_overall_ESU_R_Free 0.333 _refine.overall_SU_ML 0.208 _refine.overall_SU_B 9.284 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 10130 _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3BGK _refine_analyze.Luzzati_coordinate_error_obs 0.317 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2020 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 2043 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2062 0.007 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2805 1.070 1.964 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 274 5.103 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 71 32.091 24.789 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 327 15.459 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 17.484 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 335 0.067 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1512 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 974 0.196 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1448 0.297 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 67 0.160 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 1 0.112 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 42 0.174 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 5 0.158 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1362 0.415 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2173 0.780 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 706 1.017 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 632 1.614 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.564 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 67.460 _refine_ls_shell.number_reflns_R_work 426 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.294 _refine_ls_shell.R_factor_R_free 0.395 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 452 _refine_ls_shell.number_reflns_obs 426 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BGK _struct.title 'The crystal structure of hypothetic protein SMU.573 from Streptococcus mutans' _struct.pdbx_descriptor 'Putative uncharacterized protein SMU.573' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BGK _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'alpha/beta three layer sandwich, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 38 ? ILE A 46 ? ASP A 4 ILE A 12 1 ? 9 HELX_P HELX_P2 2 TYR A 70 ? SER A 84 ? TYR A 36 SER A 50 1 ? 15 HELX_P HELX_P3 3 HIS A 94 ? ASP A 96 ? HIS A 60 ASP A 62 5 ? 3 HELX_P HELX_P4 4 ASN A 97 ? LEU A 105 ? ASN A 63 LEU A 71 1 ? 9 HELX_P HELX_P5 5 GLU A 115 ? ALA A 126 ? GLU A 81 ALA A 92 1 ? 12 HELX_P HELX_P6 6 ASP A 138 ? ILE A 152 ? ASP A 104 ILE A 118 1 ? 15 HELX_P HELX_P7 7 GLY A 162 ? ARG A 171 ? GLY A 128 ARG A 137 1 ? 10 HELX_P HELX_P8 8 LYS A 188 ? LEU A 193 ? LYS A 154 LEU A 159 1 ? 6 HELX_P HELX_P9 9 ILE A 202 ? ALA A 211 ? ILE A 168 ALA A 177 1 ? 10 HELX_P HELX_P10 10 GLY A 241 ? ALA A 245 ? GLY A 207 ALA A 211 5 ? 5 HELX_P HELX_P11 11 GLY A 248 ? PHE A 264 ? GLY A 214 PHE A 230 1 ? 17 HELX_P HELX_P12 12 ASP A 267 ? LYS A 288 ? ASP A 233 LYS A 254 1 ? 22 HELX_P HELX_P13 13 LEU A 294 ? GLU A 311 ? LEU A 260 GLU A 277 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A LYS 43 O ? ? ? 1_555 C K . K ? ? A LYS 9 A K 279 1_555 ? ? ? ? ? ? ? 2.678 ? metalc2 metalc ? ? A ILE 46 O ? ? ? 1_555 C K . K ? ? A ILE 12 A K 279 1_555 ? ? ? ? ? ? ? 2.908 ? covale1 covale ? ? A MSE 35 C ? ? ? 1_555 A ILE 36 N ? ? A MSE 1 A ILE 2 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A ILE 75 C ? ? ? 1_555 A MSE 76 N ? ? A ILE 41 A MSE 42 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A MSE 76 C ? ? ? 1_555 A ALA 77 N ? ? A MSE 42 A ALA 43 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A ALA 108 C ? ? ? 1_555 A MSE 109 N ? ? A ALA 74 A MSE 75 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A MSE 109 C ? ? ? 1_555 A ALA 110 N ? ? A MSE 75 A ALA 76 1_555 ? ? ? ? ? ? ? 1.327 ? covale6 covale ? ? A ASP 112 C ? ? ? 1_555 A MSE 113 N ? ? A ASP 78 A MSE 79 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A MSE 113 C ? ? ? 1_555 A VAL 114 N ? ? A MSE 79 A VAL 80 1_555 ? ? ? ? ? ? ? 1.339 ? covale8 covale ? ? A LEU 130 C ? ? ? 1_555 A MSE 131 N ? ? A LEU 96 A MSE 97 1_555 ? ? ? ? ? ? ? 1.322 ? covale9 covale ? ? A MSE 131 C ? ? ? 1_555 A GLY 132 N ? ? A MSE 97 A GLY 98 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A GLY 248 C ? ? ? 1_555 A MSE 249 N ? ? A GLY 214 A MSE 215 1_555 ? ? ? ? ? ? ? 1.332 ? covale11 covale ? ? A MSE 249 C ? ? ? 1_555 A GLY 250 N ? ? A MSE 215 A GLY 216 1_555 ? ? ? ? ? ? ? 1.327 ? covale12 covale ? ? A GLY 255 C ? ? ? 1_555 A MSE 256 N ? ? A GLY 221 A MSE 222 1_555 ? ? ? ? ? ? ? 1.327 ? covale13 covale ? ? A MSE 256 C ? ? ? 1_555 A ILE 257 N ? ? A MSE 222 A ILE 223 1_555 ? ? ? ? ? ? ? 1.334 ? covale14 covale ? ? A VAL 305 C ? ? ? 1_555 A MSE 306 N ? ? A VAL 271 A MSE 272 1_555 ? ? ? ? ? ? ? 1.331 ? covale15 covale ? ? A MSE 306 C ? ? ? 1_555 A LYS 307 N ? ? A MSE 272 A LYS 273 1_555 ? ? ? ? ? ? ? 1.335 ? covale16 covale ? ? A GLU 308 C ? ? ? 1_555 A MSE 309 N ? ? A GLU 274 A MSE 275 1_555 ? ? ? ? ? ? ? 1.332 ? covale17 covale ? ? A MSE 309 C ? ? ? 1_555 A SER 310 N ? ? A MSE 275 A SER 276 1_555 ? ? ? ? ? ? ? 1.333 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 68 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 34 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 69 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 35 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.64 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel A 9 10 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 36 ? ILE A 37 ? ILE A 2 ILE A 3 A 2 LYS A 233 ? ILE A 237 ? LYS A 199 ILE A 203 A 3 LYS A 227 ? GLN A 230 ? LYS A 193 GLN A 196 A 4 ILE A 218 ? ALA A 221 ? ILE A 184 ALA A 187 A 5 ILE A 181 ? THR A 184 ? ILE A 147 THR A 150 A 6 THR A 157 ? ASP A 161 ? THR A 123 ASP A 127 A 7 VAL A 128 ? MSE A 131 ? VAL A 94 MSE A 97 A 8 ARG A 60 ? ILE A 64 ? ARG A 26 ILE A 30 A 9 LEU A 88 ? THR A 93 ? LEU A 54 THR A 59 A 10 MSE A 109 ? ASP A 112 ? MSE A 75 ASP A 78 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 37 ? N ILE A 3 O HIS A 236 ? O HIS A 202 A 2 3 O LYS A 233 ? O LYS A 199 N GLN A 230 ? N GLN A 196 A 3 4 O TYR A 229 ? O TYR A 195 N LEU A 219 ? N LEU A 185 A 4 5 O VAL A 220 ? O VAL A 186 N LEU A 183 ? N LEU A 149 A 5 6 O ILE A 182 ? O ILE A 148 N LEU A 158 ? N LEU A 124 A 6 7 O THR A 157 ? O THR A 123 N VAL A 129 ? N VAL A 95 A 7 8 O LEU A 130 ? O LEU A 96 N LEU A 62 ? N LEU A 28 A 8 9 N LEU A 63 ? N LEU A 29 O ALA A 92 ? O ALA A 58 A 9 10 N VAL A 91 ? N VAL A 57 O MSE A 109 ? O MSE A 75 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE PO4 A 278' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE K A 279' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 HIS A 186 ? HIS A 152 . ? 1_555 ? 2 AC1 7 GLY A 247 ? GLY A 213 . ? 1_555 ? 3 AC1 7 GLY A 248 ? GLY A 214 . ? 1_555 ? 4 AC1 7 MSE A 249 ? MSE A 215 . ? 1_555 ? 5 AC1 7 GLY A 250 ? GLY A 216 . ? 1_555 ? 6 AC1 7 ASP A 251 ? ASP A 217 . ? 1_555 ? 7 AC1 7 HOH D . ? HOH A 292 . ? 1_555 ? 8 AC2 4 LYS A 43 ? LYS A 9 . ? 1_555 ? 9 AC2 4 ILE A 46 ? ILE A 12 . ? 1_555 ? 10 AC2 4 MSE A 309 ? MSE A 275 . ? 1_555 ? 11 AC2 4 SER A 310 ? SER A 276 . ? 1_555 ? # _atom_sites.entry_id 3BGK _atom_sites.fract_transf_matrix[1][1] 0.010360 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010360 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017775 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C K N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -33 ? ? ? A . n A 1 2 GLY 2 -32 ? ? ? A . n A 1 3 SER 3 -31 ? ? ? A . n A 1 4 SER 4 -30 ? ? ? A . n A 1 5 HIS 5 -29 ? ? ? A . n A 1 6 HIS 6 -28 ? ? ? A . n A 1 7 HIS 7 -27 ? ? ? A . n A 1 8 HIS 8 -26 ? ? ? A . n A 1 9 HIS 9 -25 ? ? ? A . n A 1 10 HIS 10 -24 ? ? ? A . n A 1 11 SER 11 -23 ? ? ? A . n A 1 12 SER 12 -22 ? ? ? A . n A 1 13 GLY 13 -21 ? ? ? A . n A 1 14 LEU 14 -20 ? ? ? A . n A 1 15 VAL 15 -19 ? ? ? A . n A 1 16 PRO 16 -18 ? ? ? A . n A 1 17 ARG 17 -17 ? ? ? A . n A 1 18 GLY 18 -16 ? ? ? A . n A 1 19 SER 19 -15 ? ? ? A . n A 1 20 HIS 20 -14 ? ? ? A . n A 1 21 MET 21 -13 ? ? ? A . n A 1 22 ALA 22 -12 ? ? ? A . n A 1 23 SER 23 -11 ? ? ? A . n A 1 24 MET 24 -10 ? ? ? A . n A 1 25 THR 25 -9 ? ? ? A . n A 1 26 GLY 26 -8 ? ? ? A . n A 1 27 GLY 27 -7 ? ? ? A . n A 1 28 GLN 28 -6 ? ? ? A . n A 1 29 GLN 29 -5 ? ? ? A . n A 1 30 MET 30 -4 ? ? ? A . n A 1 31 GLY 31 -3 ? ? ? A . n A 1 32 ARG 32 -2 ? ? ? A . n A 1 33 GLY 33 -1 ? ? ? A . n A 1 34 SER 34 0 ? ? ? A . n A 1 35 MSE 35 1 1 MSE MSE A . n A 1 36 ILE 36 2 2 ILE ILE A . n A 1 37 ILE 37 3 3 ILE ILE A . n A 1 38 ASP 38 4 4 ASP ASP A . n A 1 39 ASP 39 5 5 ASP ASP A . n A 1 40 LEU 40 6 6 LEU LEU A . n A 1 41 LEU 41 7 7 LEU LEU A . n A 1 42 THR 42 8 8 THR THR A . n A 1 43 LYS 43 9 9 LYS LYS A . n A 1 44 LYS 44 10 10 LYS LYS A . n A 1 45 ILE 45 11 11 ILE ILE A . n A 1 46 ILE 46 12 12 ILE ILE A . n A 1 47 LYS 47 13 13 LYS LYS A . n A 1 48 PRO 48 14 14 PRO PRO A . n A 1 49 ARG 49 15 15 ARG ARG A . n A 1 50 PRO 50 16 16 PRO PRO A . n A 1 51 LEU 51 17 17 LEU LEU A . n A 1 52 ASN 52 18 18 ASN ASN A . n A 1 53 SER 53 19 19 SER SER A . n A 1 54 HIS 54 20 20 HIS HIS A . n A 1 55 LYS 55 21 21 LYS LYS A . n A 1 56 GLY 56 22 22 GLY GLY A . n A 1 57 THR 57 23 23 THR THR A . n A 1 58 PHE 58 24 24 PHE PHE A . n A 1 59 GLY 59 25 25 GLY GLY A . n A 1 60 ARG 60 26 26 ARG ARG A . n A 1 61 VAL 61 27 27 VAL VAL A . n A 1 62 LEU 62 28 28 LEU LEU A . n A 1 63 LEU 63 29 29 LEU LEU A . n A 1 64 ILE 64 30 30 ILE ILE A . n A 1 65 GLY 65 31 31 GLY GLY A . n A 1 66 GLY 66 32 32 GLY GLY A . n A 1 67 ASN 67 33 33 ASN ASN A . n A 1 68 TYR 68 34 34 TYR TYR A . n A 1 69 PRO 69 35 35 PRO PRO A . n A 1 70 TYR 70 36 36 TYR TYR A . n A 1 71 GLY 71 37 37 GLY GLY A . n A 1 72 GLY 72 38 38 GLY GLY A . n A 1 73 ALA 73 39 39 ALA ALA A . n A 1 74 ILE 74 40 40 ILE ILE A . n A 1 75 ILE 75 41 41 ILE ILE A . n A 1 76 MSE 76 42 42 MSE MSE A . n A 1 77 ALA 77 43 43 ALA ALA A . n A 1 78 ALA 78 44 44 ALA ALA A . n A 1 79 LEU 79 45 45 LEU LEU A . n A 1 80 ALA 80 46 46 ALA ALA A . n A 1 81 CYS 81 47 47 CYS CYS A . n A 1 82 VAL 82 48 48 VAL VAL A . n A 1 83 ASN 83 49 49 ASN ASN A . n A 1 84 SER 84 50 50 SER SER A . n A 1 85 GLY 85 51 51 GLY GLY A . n A 1 86 ALA 86 52 52 ALA ALA A . n A 1 87 GLY 87 53 53 GLY GLY A . n A 1 88 LEU 88 54 54 LEU LEU A . n A 1 89 VAL 89 55 55 VAL VAL A . n A 1 90 THR 90 56 56 THR THR A . n A 1 91 VAL 91 57 57 VAL VAL A . n A 1 92 ALA 92 58 58 ALA ALA A . n A 1 93 THR 93 59 59 THR THR A . n A 1 94 HIS 94 60 60 HIS HIS A . n A 1 95 LYS 95 61 61 LYS LYS A . n A 1 96 ASP 96 62 62 ASP ASP A . n A 1 97 ASN 97 63 63 ASN ASN A . n A 1 98 ILE 98 64 64 ILE ILE A . n A 1 99 THR 99 65 65 THR THR A . n A 1 100 ALA 100 66 66 ALA ALA A . n A 1 101 LEU 101 67 67 LEU LEU A . n A 1 102 HIS 102 68 68 HIS HIS A . n A 1 103 SER 103 69 69 SER SER A . n A 1 104 HIS 104 70 70 HIS HIS A . n A 1 105 LEU 105 71 71 LEU LEU A . n A 1 106 PRO 106 72 72 PRO PRO A . n A 1 107 GLU 107 73 73 GLU GLU A . n A 1 108 ALA 108 74 74 ALA ALA A . n A 1 109 MSE 109 75 75 MSE MSE A . n A 1 110 ALA 110 76 76 ALA ALA A . n A 1 111 PHE 111 77 77 PHE PHE A . n A 1 112 ASP 112 78 78 ASP ASP A . n A 1 113 MSE 113 79 79 MSE MSE A . n A 1 114 VAL 114 80 80 VAL VAL A . n A 1 115 GLU 115 81 81 GLU GLU A . n A 1 116 LYS 116 82 82 LYS LYS A . n A 1 117 ASP 117 83 83 ASP ASP A . n A 1 118 ARG 118 84 84 ARG ARG A . n A 1 119 LEU 119 85 85 LEU LEU A . n A 1 120 SER 120 86 86 SER SER A . n A 1 121 GLU 121 87 87 GLU GLU A . n A 1 122 GLN 122 88 88 GLN GLN A . n A 1 123 ILE 123 89 89 ILE ILE A . n A 1 124 THR 124 90 90 THR THR A . n A 1 125 ALA 125 91 91 ALA ALA A . n A 1 126 ALA 126 92 92 ALA ALA A . n A 1 127 ASP 127 93 93 ASP ASP A . n A 1 128 VAL 128 94 94 VAL VAL A . n A 1 129 VAL 129 95 95 VAL VAL A . n A 1 130 LEU 130 96 96 LEU LEU A . n A 1 131 MSE 131 97 97 MSE MSE A . n A 1 132 GLY 132 98 98 GLY GLY A . n A 1 133 PRO 133 99 99 PRO PRO A . n A 1 134 GLY 134 100 100 GLY GLY A . n A 1 135 LEU 135 101 101 LEU LEU A . n A 1 136 ALA 136 102 102 ALA ALA A . n A 1 137 GLU 137 103 103 GLU GLU A . n A 1 138 ASP 138 104 104 ASP ASP A . n A 1 139 ASP 139 105 105 ASP ASP A . n A 1 140 LEU 140 106 106 LEU LEU A . n A 1 141 ALA 141 107 107 ALA ALA A . n A 1 142 GLN 142 108 108 GLN GLN A . n A 1 143 THR 143 109 109 THR THR A . n A 1 144 THR 144 110 110 THR THR A . n A 1 145 PHE 145 111 111 PHE PHE A . n A 1 146 ASP 146 112 112 ASP ASP A . n A 1 147 VAL 147 113 113 VAL VAL A . n A 1 148 VAL 148 114 114 VAL VAL A . n A 1 149 TRP 149 115 115 TRP TRP A . n A 1 150 GLN 150 116 116 GLN GLN A . n A 1 151 ALA 151 117 117 ALA ALA A . n A 1 152 ILE 152 118 118 ILE ILE A . n A 1 153 GLU 153 119 119 GLU GLU A . n A 1 154 PRO 154 120 120 PRO PRO A . n A 1 155 LYS 155 121 121 LYS LYS A . n A 1 156 GLN 156 122 122 GLN GLN A . n A 1 157 THR 157 123 123 THR THR A . n A 1 158 LEU 158 124 124 LEU LEU A . n A 1 159 ILE 159 125 125 ILE ILE A . n A 1 160 ILE 160 126 126 ILE ILE A . n A 1 161 ASP 161 127 127 ASP ASP A . n A 1 162 GLY 162 128 128 GLY GLY A . n A 1 163 SER 163 129 129 SER SER A . n A 1 164 ALA 164 130 130 ALA ALA A . n A 1 165 ILE 165 131 131 ILE ILE A . n A 1 166 ASN 166 132 132 ASN ASN A . n A 1 167 LEU 167 133 133 LEU LEU A . n A 1 168 LEU 168 134 134 LEU LEU A . n A 1 169 ALA 169 135 135 ALA ALA A . n A 1 170 LYS 170 136 136 LYS LYS A . n A 1 171 ARG 171 137 137 ARG ARG A . n A 1 172 LYS 172 138 138 LYS LYS A . n A 1 173 PRO 173 139 ? ? ? A . n A 1 174 ALA 174 140 140 ALA ALA A . n A 1 175 ILE 175 141 141 ILE ILE A . n A 1 176 TRP 176 142 142 TRP TRP A . n A 1 177 PRO 177 143 143 PRO PRO A . n A 1 178 THR 178 144 144 THR THR A . n A 1 179 LYS 179 145 145 LYS LYS A . n A 1 180 GLN 180 146 146 GLN GLN A . n A 1 181 ILE 181 147 147 ILE ILE A . n A 1 182 ILE 182 148 148 ILE ILE A . n A 1 183 LEU 183 149 149 LEU LEU A . n A 1 184 THR 184 150 150 THR THR A . n A 1 185 PRO 185 151 151 PRO PRO A . n A 1 186 HIS 186 152 152 HIS HIS A . n A 1 187 GLN 187 153 153 GLN GLN A . n A 1 188 LYS 188 154 154 LYS LYS A . n A 1 189 GLU 189 155 155 GLU GLU A . n A 1 190 TRP 190 156 156 TRP TRP A . n A 1 191 GLU 191 157 157 GLU GLU A . n A 1 192 ARG 192 158 158 ARG ARG A . n A 1 193 LEU 193 159 159 LEU LEU A . n A 1 194 SER 194 160 160 SER SER A . n A 1 195 GLY 195 161 161 GLY GLY A . n A 1 196 LEU 196 162 162 LEU LEU A . n A 1 197 THR 197 163 163 THR THR A . n A 1 198 ILE 198 164 164 ILE ILE A . n A 1 199 PRO 199 165 165 PRO PRO A . n A 1 200 GLU 200 166 166 GLU GLU A . n A 1 201 GLN 201 167 167 GLN GLN A . n A 1 202 ILE 202 168 168 ILE ILE A . n A 1 203 GLU 203 169 169 GLU GLU A . n A 1 204 ALA 204 170 170 ALA ALA A . n A 1 205 ALA 205 171 171 ALA ALA A . n A 1 206 THR 206 172 172 THR THR A . n A 1 207 GLN 207 173 173 GLN GLN A . n A 1 208 THR 208 174 174 THR THR A . n A 1 209 ALA 209 175 175 ALA ALA A . n A 1 210 LEU 210 176 176 LEU LEU A . n A 1 211 ALA 211 177 177 ALA ALA A . n A 1 212 HIS 212 178 178 HIS HIS A . n A 1 213 PHE 213 179 179 PHE PHE A . n A 1 214 PRO 214 180 180 PRO PRO A . n A 1 215 LYS 215 181 181 LYS LYS A . n A 1 216 GLU 216 182 182 GLU GLU A . n A 1 217 THR 217 183 183 THR THR A . n A 1 218 ILE 218 184 184 ILE ILE A . n A 1 219 LEU 219 185 185 LEU LEU A . n A 1 220 VAL 220 186 186 VAL VAL A . n A 1 221 ALA 221 187 187 ALA ALA A . n A 1 222 LYS 222 188 188 LYS LYS A . n A 1 223 SER 223 189 189 SER SER A . n A 1 224 HIS 224 190 190 HIS HIS A . n A 1 225 GLN 225 191 191 GLN GLN A . n A 1 226 THR 226 192 192 THR THR A . n A 1 227 LYS 227 193 193 LYS LYS A . n A 1 228 ILE 228 194 194 ILE ILE A . n A 1 229 TYR 229 195 195 TYR TYR A . n A 1 230 GLN 230 196 196 GLN GLN A . n A 1 231 GLY 231 197 197 GLY GLY A . n A 1 232 GLN 232 198 198 GLN GLN A . n A 1 233 LYS 233 199 199 LYS LYS A . n A 1 234 ILE 234 200 200 ILE ILE A . n A 1 235 GLY 235 201 201 GLY GLY A . n A 1 236 HIS 236 202 202 HIS HIS A . n A 1 237 ILE 237 203 203 ILE ILE A . n A 1 238 GLN 238 204 204 GLN GLN A . n A 1 239 VAL 239 205 205 VAL VAL A . n A 1 240 GLY 240 206 206 GLY GLY A . n A 1 241 GLY 241 207 207 GLY GLY A . n A 1 242 PRO 242 208 208 PRO PRO A . n A 1 243 TYR 243 209 209 TYR TYR A . n A 1 244 GLN 244 210 210 GLN GLN A . n A 1 245 ALA 245 211 211 ALA ALA A . n A 1 246 THR 246 212 212 THR THR A . n A 1 247 GLY 247 213 213 GLY GLY A . n A 1 248 GLY 248 214 214 GLY GLY A . n A 1 249 MSE 249 215 215 MSE MSE A . n A 1 250 GLY 250 216 216 GLY GLY A . n A 1 251 ASP 251 217 217 ASP ASP A . n A 1 252 THR 252 218 218 THR THR A . n A 1 253 LEU 253 219 219 LEU LEU A . n A 1 254 ALA 254 220 220 ALA ALA A . n A 1 255 GLY 255 221 221 GLY GLY A . n A 1 256 MSE 256 222 222 MSE MSE A . n A 1 257 ILE 257 223 223 ILE ILE A . n A 1 258 ALA 258 224 224 ALA ALA A . n A 1 259 GLY 259 225 225 GLY GLY A . n A 1 260 PHE 260 226 226 PHE PHE A . n A 1 261 VAL 261 227 227 VAL VAL A . n A 1 262 ALA 262 228 228 ALA ALA A . n A 1 263 GLN 263 229 229 GLN GLN A . n A 1 264 PHE 264 230 230 PHE PHE A . n A 1 265 HIS 265 231 231 HIS HIS A . n A 1 266 THR 266 232 232 THR THR A . n A 1 267 ASP 267 233 233 ASP ASP A . n A 1 268 ARG 268 234 234 ARG ARG A . n A 1 269 PHE 269 235 235 PHE PHE A . n A 1 270 GLU 270 236 236 GLU GLU A . n A 1 271 VAL 271 237 237 VAL VAL A . n A 1 272 ALA 272 238 238 ALA ALA A . n A 1 273 ALA 273 239 239 ALA ALA A . n A 1 274 ALA 274 240 240 ALA ALA A . n A 1 275 ALA 275 241 241 ALA ALA A . n A 1 276 VAL 276 242 242 VAL VAL A . n A 1 277 PHE 277 243 243 PHE PHE A . n A 1 278 LEU 278 244 244 LEU LEU A . n A 1 279 HIS 279 245 245 HIS HIS A . n A 1 280 SER 280 246 246 SER SER A . n A 1 281 TYR 281 247 247 TYR TYR A . n A 1 282 ILE 282 248 248 ILE ILE A . n A 1 283 ALA 283 249 249 ALA ALA A . n A 1 284 ASP 284 250 250 ASP ASP A . n A 1 285 GLN 285 251 251 GLN GLN A . n A 1 286 LEU 286 252 252 LEU LEU A . n A 1 287 SER 287 253 253 SER SER A . n A 1 288 LYS 288 254 254 LYS LYS A . n A 1 289 GLU 289 255 255 GLU GLU A . n A 1 290 ALA 290 256 256 ALA ALA A . n A 1 291 TYR 291 257 257 TYR TYR A . n A 1 292 VAL 292 258 258 VAL VAL A . n A 1 293 VAL 293 259 259 VAL VAL A . n A 1 294 LEU 294 260 260 LEU LEU A . n A 1 295 PRO 295 261 261 PRO PRO A . n A 1 296 THR 296 262 262 THR THR A . n A 1 297 ARG 297 263 263 ARG ARG A . n A 1 298 ILE 298 264 264 ILE ILE A . n A 1 299 SER 299 265 265 SER SER A . n A 1 300 ALA 300 266 266 ALA ALA A . n A 1 301 GLU 301 267 267 GLU GLU A . n A 1 302 ILE 302 268 268 ILE ILE A . n A 1 303 THR 303 269 269 THR THR A . n A 1 304 ARG 304 270 270 ARG ARG A . n A 1 305 VAL 305 271 271 VAL VAL A . n A 1 306 MSE 306 272 272 MSE MSE A . n A 1 307 LYS 307 273 273 LYS LYS A . n A 1 308 GLU 308 274 274 GLU GLU A . n A 1 309 MSE 309 275 275 MSE MSE A . n A 1 310 SER 310 276 276 SER SER A . n A 1 311 GLU 311 277 277 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 278 1 PO4 PO4 A . C 3 K 1 279 2 K K A . D 4 HOH 1 280 1 HOH HOH A . D 4 HOH 2 281 2 HOH HOH A . D 4 HOH 3 282 3 HOH HOH A . D 4 HOH 4 283 4 HOH HOH A . D 4 HOH 5 284 5 HOH HOH A . D 4 HOH 6 285 6 HOH HOH A . D 4 HOH 7 286 7 HOH HOH A . D 4 HOH 8 287 8 HOH HOH A . D 4 HOH 9 288 9 HOH HOH A . D 4 HOH 10 289 10 HOH HOH A . D 4 HOH 11 290 11 HOH HOH A . D 4 HOH 12 291 12 HOH HOH A . D 4 HOH 13 292 13 HOH HOH A . D 4 HOH 14 293 14 HOH HOH A . D 4 HOH 15 294 15 HOH HOH A . D 4 HOH 16 295 16 HOH HOH A . D 4 HOH 17 296 17 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 35 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 76 A MSE 42 ? MET SELENOMETHIONINE 3 A MSE 109 A MSE 75 ? MET SELENOMETHIONINE 4 A MSE 113 A MSE 79 ? MET SELENOMETHIONINE 5 A MSE 131 A MSE 97 ? MET SELENOMETHIONINE 6 A MSE 249 A MSE 215 ? MET SELENOMETHIONINE 7 A MSE 256 A MSE 222 ? MET SELENOMETHIONINE 8 A MSE 306 A MSE 272 ? MET SELENOMETHIONINE 9 A MSE 309 A MSE 275 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 11250 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 96.5270000000 0.0000000000 -1.0000000000 0.0000000000 96.5270000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -y+1,x,z 0.0000000000 -1.0000000000 0.0000000000 96.5270000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_565 y,-x+1,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 96.5270000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id LYS _pdbx_struct_conn_angle.ptnr1_label_seq_id 43 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id LYS _pdbx_struct_conn_angle.ptnr1_auth_seq_id 9 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id K _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id C _pdbx_struct_conn_angle.ptnr2_label_comp_id K _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id K _pdbx_struct_conn_angle.ptnr2_auth_seq_id 279 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id ILE _pdbx_struct_conn_angle.ptnr3_label_seq_id 46 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id ILE _pdbx_struct_conn_angle.ptnr3_auth_seq_id 12 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 81.5 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.300 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 9331 _diffrn_reflns.pdbx_Rmerge_I_obs 0.051 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.10 _diffrn_reflns.av_sigmaI_over_netI 32.10 _diffrn_reflns.pdbx_redundancy 10.00 _diffrn_reflns.pdbx_percent_possible_obs 80.10 _diffrn_reflns.number 93650 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.95 50.00 ? ? 0.053 ? 1.070 12.30 99.10 1 3.93 4.95 ? ? 0.047 ? 1.043 12.20 99.50 1 3.44 3.93 ? ? 0.048 ? 1.103 8.90 94.70 1 3.12 3.44 ? ? 0.049 ? 1.112 11.50 97.00 1 2.90 3.12 ? ? 0.055 ? 1.049 12.00 100.00 1 2.73 2.90 ? ? 0.060 ? 1.183 11.70 99.90 1 2.59 2.73 ? ? 0.071 ? 1.262 7.50 85.50 1 2.48 2.59 ? ? 0.078 ? 0.918 6.10 66.90 1 2.38 2.48 ? ? 0.090 ? 1.078 4.00 43.80 1 2.30 2.38 ? ? 0.099 ? 1.164 2.30 13.10 # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.fract_x _pdbx_phasing_MAD_set_site.fract_y _pdbx_phasing_MAD_set_site.fract_z _pdbx_phasing_MAD_set_site.b_iso 1 S 0.801 0.353 0.529 0.279 14.903 2 S 1.018 0.322 0.385 0.464 28.528 3 S 1.051 0.301 0.452 0.413 35.262 4 S 1.186 0.296 0.533 0.397 42.865 5 S 0.970 0.278 0.411 0.607 40.526 6 S 0.909 0.247 0.420 0.057 43.697 7 S 0.595 0.352 0.600 0.093 24.954 # _pdbx_phasing_dm.entry_id 3BGK _pdbx_phasing_dm.method 'Solvent flattening and Histogram matching' _pdbx_phasing_dm.reflns 9331 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 6.640 100.000 45.200 ? ? ? 0.793 ? ? 503 5.240 6.640 48.600 ? ? ? 0.826 ? ? 513 4.560 5.240 44.800 ? ? ? 0.834 ? ? 515 4.130 4.560 45.900 ? ? ? 0.841 ? ? 509 3.820 4.130 54.800 ? ? ? 0.810 ? ? 506 3.590 3.820 51.300 ? ? ? 0.798 ? ? 511 3.390 3.590 52.500 ? ? ? 0.772 ? ? 505 3.250 3.390 50.400 ? ? ? 0.822 ? ? 511 3.120 3.250 49.400 ? ? ? 0.811 ? ? 511 3.020 3.120 52.000 ? ? ? 0.785 ? ? 510 2.920 3.020 56.000 ? ? ? 0.755 ? ? 513 2.840 2.920 51.900 ? ? ? 0.771 ? ? 519 2.760 2.840 51.600 ? ? ? 0.767 ? ? 508 2.700 2.760 55.200 ? ? ? 0.788 ? ? 506 2.620 2.700 62.700 ? ? ? 0.707 ? ? 509 2.550 2.620 60.600 ? ? ? 0.663 ? ? 511 2.480 2.550 70.200 ? ? ? 0.624 ? ? 503 2.320 2.480 72.900 ? ? ? 0.549 ? ? 668 # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SOLVE . ? package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 DM 6.0 ? program 'K. Cowtan' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 5 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 CrystalClear . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 8 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 9 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 4 ? ? -126.30 -166.32 2 1 ILE A 12 ? ? -67.69 88.27 3 1 ASN A 18 ? ? -73.39 -71.86 4 1 LYS A 21 ? ? 80.30 -174.45 5 1 TYR A 36 ? ? -96.54 42.03 6 1 LYS A 61 ? ? -28.82 -53.23 7 1 LEU A 71 ? ? -152.07 76.82 8 1 ALA A 102 ? ? 64.17 -167.76 9 1 ASP A 104 ? ? -65.70 -172.64 10 1 ARG A 137 ? ? -104.28 -167.50 11 1 GLN A 167 ? ? -92.04 45.90 12 1 ALA A 177 ? ? -67.30 75.75 13 1 HIS A 178 ? ? -178.48 -23.09 14 1 THR A 232 ? ? -73.96 -163.10 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 18 ? CB ? A ASN 52 CB 2 1 Y 1 A ASN 18 ? CG ? A ASN 52 CG 3 1 Y 1 A ASN 18 ? OD1 ? A ASN 52 OD1 4 1 Y 1 A ASN 18 ? ND2 ? A ASN 52 ND2 5 1 Y 1 A HIS 20 ? CB ? A HIS 54 CB 6 1 Y 1 A HIS 20 ? CG ? A HIS 54 CG 7 1 Y 1 A HIS 20 ? ND1 ? A HIS 54 ND1 8 1 Y 1 A HIS 20 ? CD2 ? A HIS 54 CD2 9 1 Y 1 A HIS 20 ? CE1 ? A HIS 54 CE1 10 1 Y 1 A HIS 20 ? NE2 ? A HIS 54 NE2 11 1 Y 1 A THR 23 ? CG2 ? A THR 57 CG2 12 1 Y 1 A ARG 26 ? NE ? A ARG 60 NE 13 1 Y 1 A ARG 26 ? CZ ? A ARG 60 CZ 14 1 Y 1 A ARG 26 ? NH1 ? A ARG 60 NH1 15 1 Y 1 A ARG 26 ? NH2 ? A ARG 60 NH2 16 1 Y 1 A LYS 61 ? CE ? A LYS 95 CE 17 1 Y 1 A LYS 61 ? NZ ? A LYS 95 NZ 18 1 Y 1 A LYS 82 ? CG ? A LYS 116 CG 19 1 Y 1 A LYS 82 ? CD ? A LYS 116 CD 20 1 Y 1 A LYS 82 ? CE ? A LYS 116 CE 21 1 Y 1 A LYS 82 ? NZ ? A LYS 116 NZ 22 1 Y 1 A GLU 87 ? CD ? A GLU 121 CD 23 1 Y 1 A GLU 87 ? OE1 ? A GLU 121 OE1 24 1 Y 1 A GLU 87 ? OE2 ? A GLU 121 OE2 25 1 Y 1 A GLN 116 ? CD ? A GLN 150 CD 26 1 Y 1 A GLN 116 ? OE1 ? A GLN 150 OE1 27 1 Y 1 A GLN 116 ? NE2 ? A GLN 150 NE2 28 1 Y 1 A LYS 121 ? CG ? A LYS 155 CG 29 1 Y 1 A LYS 121 ? CD ? A LYS 155 CD 30 1 Y 1 A LYS 121 ? CE ? A LYS 155 CE 31 1 Y 1 A LYS 121 ? NZ ? A LYS 155 NZ 32 1 Y 1 A LYS 136 ? CG ? A LYS 170 CG 33 1 Y 1 A LYS 136 ? CD ? A LYS 170 CD 34 1 Y 1 A LYS 136 ? CE ? A LYS 170 CE 35 1 Y 1 A LYS 136 ? NZ ? A LYS 170 NZ 36 1 Y 1 A LYS 138 ? CG ? A LYS 172 CG 37 1 Y 1 A LYS 138 ? CD ? A LYS 172 CD 38 1 Y 1 A LYS 138 ? CE ? A LYS 172 CE 39 1 Y 1 A LYS 138 ? NZ ? A LYS 172 NZ 40 1 Y 1 A GLN 153 ? CB ? A GLN 187 CB 41 1 Y 1 A GLN 153 ? CG ? A GLN 187 CG 42 1 Y 1 A GLN 153 ? CD ? A GLN 187 CD 43 1 Y 1 A GLN 153 ? OE1 ? A GLN 187 OE1 44 1 Y 1 A GLN 153 ? NE2 ? A GLN 187 NE2 45 1 Y 1 A LYS 154 ? CB ? A LYS 188 CB 46 1 Y 1 A LYS 154 ? CG ? A LYS 188 CG 47 1 Y 1 A LYS 154 ? CD ? A LYS 188 CD 48 1 Y 1 A LYS 154 ? CE ? A LYS 188 CE 49 1 Y 1 A LYS 154 ? NZ ? A LYS 188 NZ 50 1 Y 1 A TRP 156 ? O ? A TRP 190 O 51 1 Y 1 A GLU 157 ? CB ? A GLU 191 CB 52 1 Y 1 A GLU 157 ? CG ? A GLU 191 CG 53 1 Y 1 A GLU 157 ? CD ? A GLU 191 CD 54 1 Y 1 A GLU 157 ? OE1 ? A GLU 191 OE1 55 1 Y 1 A GLU 157 ? OE2 ? A GLU 191 OE2 56 1 Y 1 A ARG 158 ? CG ? A ARG 192 CG 57 1 Y 1 A ARG 158 ? CD ? A ARG 192 CD 58 1 Y 1 A ARG 158 ? NE ? A ARG 192 NE 59 1 Y 1 A ARG 158 ? CZ ? A ARG 192 CZ 60 1 Y 1 A ARG 158 ? NH1 ? A ARG 192 NH1 61 1 Y 1 A ARG 158 ? NH2 ? A ARG 192 NH2 62 1 Y 1 A ILE 164 ? CG1 ? A ILE 198 CG1 63 1 Y 1 A ILE 164 ? CG2 ? A ILE 198 CG2 64 1 Y 1 A ILE 164 ? CD1 ? A ILE 198 CD1 65 1 Y 1 A ILE 168 ? CG1 ? A ILE 202 CG1 66 1 Y 1 A ILE 168 ? CG2 ? A ILE 202 CG2 67 1 Y 1 A ILE 168 ? CD1 ? A ILE 202 CD1 68 1 Y 1 A GLU 169 ? CG ? A GLU 203 CG 69 1 Y 1 A GLU 169 ? CD ? A GLU 203 CD 70 1 Y 1 A GLU 169 ? OE1 ? A GLU 203 OE1 71 1 Y 1 A GLU 169 ? OE2 ? A GLU 203 OE2 72 1 Y 1 A LYS 181 ? CG ? A LYS 215 CG 73 1 Y 1 A LYS 181 ? CD ? A LYS 215 CD 74 1 Y 1 A LYS 181 ? CE ? A LYS 215 CE 75 1 Y 1 A LYS 181 ? NZ ? A LYS 215 NZ 76 1 Y 1 A HIS 190 ? CB ? A HIS 224 CB 77 1 Y 1 A HIS 190 ? CG ? A HIS 224 CG 78 1 Y 1 A HIS 190 ? ND1 ? A HIS 224 ND1 79 1 Y 1 A HIS 190 ? CD2 ? A HIS 224 CD2 80 1 Y 1 A HIS 190 ? CE1 ? A HIS 224 CE1 81 1 Y 1 A HIS 190 ? NE2 ? A HIS 224 NE2 82 1 Y 1 A GLN 191 ? CD ? A GLN 225 CD 83 1 Y 1 A GLN 191 ? OE1 ? A GLN 225 OE1 84 1 Y 1 A GLN 191 ? NE2 ? A GLN 225 NE2 85 1 Y 1 A GLU 277 ? CG ? A GLU 311 CG 86 1 Y 1 A GLU 277 ? CD ? A GLU 311 CD 87 1 Y 1 A GLU 277 ? OE1 ? A GLU 311 OE1 88 1 Y 1 A GLU 277 ? OE2 ? A GLU 311 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -33 ? A MET 1 2 1 Y 1 A GLY -32 ? A GLY 2 3 1 Y 1 A SER -31 ? A SER 3 4 1 Y 1 A SER -30 ? A SER 4 5 1 Y 1 A HIS -29 ? A HIS 5 6 1 Y 1 A HIS -28 ? A HIS 6 7 1 Y 1 A HIS -27 ? A HIS 7 8 1 Y 1 A HIS -26 ? A HIS 8 9 1 Y 1 A HIS -25 ? A HIS 9 10 1 Y 1 A HIS -24 ? A HIS 10 11 1 Y 1 A SER -23 ? A SER 11 12 1 Y 1 A SER -22 ? A SER 12 13 1 Y 1 A GLY -21 ? A GLY 13 14 1 Y 1 A LEU -20 ? A LEU 14 15 1 Y 1 A VAL -19 ? A VAL 15 16 1 Y 1 A PRO -18 ? A PRO 16 17 1 Y 1 A ARG -17 ? A ARG 17 18 1 Y 1 A GLY -16 ? A GLY 18 19 1 Y 1 A SER -15 ? A SER 19 20 1 Y 1 A HIS -14 ? A HIS 20 21 1 Y 1 A MET -13 ? A MET 21 22 1 Y 1 A ALA -12 ? A ALA 22 23 1 Y 1 A SER -11 ? A SER 23 24 1 Y 1 A MET -10 ? A MET 24 25 1 Y 1 A THR -9 ? A THR 25 26 1 Y 1 A GLY -8 ? A GLY 26 27 1 Y 1 A GLY -7 ? A GLY 27 28 1 Y 1 A GLN -6 ? A GLN 28 29 1 Y 1 A GLN -5 ? A GLN 29 30 1 Y 1 A MET -4 ? A MET 30 31 1 Y 1 A GLY -3 ? A GLY 31 32 1 Y 1 A ARG -2 ? A ARG 32 33 1 Y 1 A GLY -1 ? A GLY 33 34 1 Y 1 A SER 0 ? A SER 34 35 1 Y 1 A PRO 139 ? A PRO 173 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 'POTASSIUM ION' K 4 water HOH #