data_3BQP # _entry.id 3BQP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3BQP RCSB RCSB045848 WWPDB D_1000045848 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3BQQ _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BQP _pdbx_database_status.recvd_initial_deposition_date 2007-12-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Prive, G.G.' 1 'Popovic, K.' 2 # _citation.id primary _citation.title 'Structures of the human ceramide activator protein saposin D.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 64 _citation.page_first 589 _citation.page_last 594 _citation.year 2008 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18453694 _citation.pdbx_database_id_DOI 10.1107/S0907444908003120 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Popovic, K.' 1 primary 'Prive, G.G.' 2 # _cell.entry_id 3BQP _cell.length_a 40.45 _cell.length_b 61.45 _cell.length_c 64.57 _cell.angle_alpha 90.0 _cell.angle_beta 90.0 _cell.angle_gamma 90.0 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BQP _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Proactivator polypeptide' 8926.332 2 ? ? 'SAPOSIN D, RESIDUES 405-484' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 3 water nat water 18.015 198 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CERAMIDE ACTIVATOR PROTEIN;' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code DGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPS _entity_poly.pdbx_seq_one_letter_code_can DGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPS _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 GLY n 1 3 GLY n 1 4 PHE n 1 5 CYS n 1 6 GLU n 1 7 VAL n 1 8 CYS n 1 9 LYS n 1 10 LYS n 1 11 LEU n 1 12 VAL n 1 13 GLY n 1 14 TYR n 1 15 LEU n 1 16 ASP n 1 17 ARG n 1 18 ASN n 1 19 LEU n 1 20 GLU n 1 21 LYS n 1 22 ASN n 1 23 SER n 1 24 THR n 1 25 LYS n 1 26 GLN n 1 27 GLU n 1 28 ILE n 1 29 LEU n 1 30 ALA n 1 31 ALA n 1 32 LEU n 1 33 GLU n 1 34 LYS n 1 35 GLY n 1 36 CYS n 1 37 SER n 1 38 PHE n 1 39 LEU n 1 40 PRO n 1 41 ASP n 1 42 PRO n 1 43 TYR n 1 44 GLN n 1 45 LYS n 1 46 GLN n 1 47 CYS n 1 48 ASP n 1 49 GLN n 1 50 PHE n 1 51 VAL n 1 52 ALA n 1 53 GLU n 1 54 TYR n 1 55 GLU n 1 56 PRO n 1 57 VAL n 1 58 LEU n 1 59 ILE n 1 60 GLU n 1 61 ILE n 1 62 LEU n 1 63 VAL n 1 64 GLU n 1 65 VAL n 1 66 MET n 1 67 ASP n 1 68 PRO n 1 69 SER n 1 70 PHE n 1 71 VAL n 1 72 CYS n 1 73 LEU n 1 74 LYS n 1 75 ILE n 1 76 GLY n 1 77 ALA n 1 78 CYS n 1 79 PRO n 1 80 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene PSAP; _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) ROSETTA-GAMI 2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-16 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SAP_HUMAN _struct_ref.pdbx_db_accession P07602 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPS ; _struct_ref.pdbx_align_begin 405 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3BQP A 1 ? 80 ? P07602 405 ? 484 ? 1 80 2 1 3BQP B 1 ? 80 ? P07602 405 ? 484 ? 1 80 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3BQP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'PEG 8K, MAGNESIUM CHLORIDE, TRIS.HCL BUFFER, PH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-03-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.033 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.033 # _reflns.entry_id 3BQP _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 45.0 _reflns.d_resolution_high 1.30 _reflns.number_obs 38323 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.044 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 35.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.30 _reflns_shell.d_res_low 1.35 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs 0.218 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.1 _reflns_shell.pdbx_redundancy 6.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3BQP _refine.ls_number_reflns_obs 38323 _refine.ls_number_reflns_all 38323 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.28 _refine.ls_d_res_high 1.30 _refine.ls_percent_reflns_obs 95.0 _refine.ls_R_factor_obs 0.1760 _refine.ls_R_factor_all 0.1773 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.2337 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 2010 _refine.ls_number_parameters 13278 _refine.ls_number_restraints 16744 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details 'ANISOTROPIC REFINEMENT REDUCED FREE R (NO CUTOFF)' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3BQP _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 11 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 1417.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1271 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 198 _refine_hist.number_atoms_total 1472 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 34.28 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.030 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0264 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.062 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.067 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.019 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.004 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.055 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.090 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 3BQP _pdbx_refine.R_factor_all_no_cutoff 0.1773 _pdbx_refine.R_factor_obs_no_cutoff 0.1760 _pdbx_refine.free_R_factor_no_cutoff 0.2337 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.2 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 2010 _pdbx_refine.R_factor_all_4sig_cutoff 0.1727 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1714 _pdbx_refine.free_R_factor_4sig_cutoff 0.2294 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.2 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1822 _pdbx_refine.number_reflns_obs_4sig_cutoff 34980 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BQP _struct.title 'Crystal Structure of Human Saposin D (orthorhombic)' _struct.pdbx_descriptor ;Proactivator polypeptide precursor [Contains: Saposin-A (Protein A); Saposin-B-Val; Saposin-B (Sphingolipid activator protein 1) (SAP-1) (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sulfatide/GM1 activator); Saposin-C (Co-beta-glucosidase) (A1 activator) (Glucosylceramidase activator) (Sphingolipid activator protein 2) (SAP-2); Saposin-D (Protein C) (Component C)] ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BQP _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' _struct_keywords.text ;SAPOSIN, SPHINGOLIPID ACTIVATOR PROTEIN, LIPID BINDING PROTEIN, ACID CERAMIDASE, FARBER DISEASE, LIPID METABOLISM, LYSOSOME, SPHINGOLIPID METABOLISM ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 4 ? LEU A 19 ? PHE A 4 LEU A 19 1 ? 16 HELX_P HELX_P2 2 THR A 24 ? CYS A 36 ? THR A 24 CYS A 36 1 ? 13 HELX_P HELX_P3 3 SER A 37 ? LEU A 39 ? SER A 37 LEU A 39 5 ? 3 HELX_P HELX_P4 4 PRO A 40 ? PRO A 42 ? PRO A 40 PRO A 42 5 ? 3 HELX_P HELX_P5 5 TYR A 43 ? VAL A 63 ? TYR A 43 VAL A 63 1 ? 21 HELX_P HELX_P6 6 ASP A 67 ? ILE A 75 ? ASP A 67 ILE A 75 1 ? 9 HELX_P HELX_P7 7 PHE B 4 ? LEU B 19 ? PHE B 4 LEU B 19 1 ? 16 HELX_P HELX_P8 8 THR B 24 ? CYS B 36 ? THR B 24 CYS B 36 1 ? 13 HELX_P HELX_P9 9 SER B 37 ? LEU B 39 ? SER B 37 LEU B 39 5 ? 3 HELX_P HELX_P10 10 PRO B 40 ? PRO B 42 ? PRO B 40 PRO B 42 5 ? 3 HELX_P HELX_P11 11 TYR B 43 ? VAL B 63 ? TYR B 43 VAL B 63 1 ? 21 HELX_P HELX_P12 12 ASP B 67 ? ILE B 75 ? ASP B 67 ILE B 75 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 78 SG ? ? A CYS 5 A CYS 78 1_555 ? ? ? ? ? ? ? 2.080 ? disulf2 disulf ? ? A CYS 8 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 8 A CYS 72 1_555 ? ? ? ? ? ? ? 2.013 ? disulf3 disulf ? ? A CYS 36 SG ? ? ? 1_555 A CYS 47 SG ? ? A CYS 36 A CYS 47 1_555 ? ? ? ? ? ? ? 2.080 ? disulf4 disulf ? ? B CYS 5 SG ? ? ? 1_555 B CYS 78 SG ? ? B CYS 5 B CYS 78 1_555 ? ? ? ? ? ? ? 2.111 ? disulf5 disulf ? ? B CYS 8 SG ? ? ? 1_555 B CYS 72 SG ? ? B CYS 8 B CYS 72 1_555 ? ? ? ? ? ? ? 2.043 ? disulf6 disulf ? ? B CYS 36 SG ? ? ? 1_555 B CYS 47 SG ? ? B CYS 36 B CYS 47 1_555 ? ? ? ? ? ? ? 2.076 ? metalc1 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 81 A HOH 642 1_555 ? ? ? ? ? ? ? 1.825 ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 81 A HOH 630 1_555 ? ? ? ? ? ? ? 1.983 ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 81 A HOH 673 1_555 ? ? ? ? ? ? ? 1.973 ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 81 A HOH 654 1_555 ? ? ? ? ? ? ? 1.973 ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 82 A HOH 674 1_555 ? ? ? ? ? ? ? 1.978 ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 82 A HOH 675 1_555 ? ? ? ? ? ? ? 2.037 ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 82 A HOH 585 1_555 ? ? ? ? ? ? ? 2.128 ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 82 B HOH 633 1_555 ? ? ? ? ? ? ? 2.090 ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 82 B HOH 632 1_555 ? ? ? ? ? ? ? 2.071 ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 82 A HOH 606 1_555 ? ? ? ? ? ? ? 2.101 ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 83 A HOH 676 1_555 ? ? ? ? ? ? ? 1.924 ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 83 A HOH 677 1_555 ? ? ? ? ? ? ? 1.930 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MG A 81' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MG A 82' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MG A 83' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH F . ? HOH A 628 . ? 4_455 ? 2 AC1 6 HOH F . ? HOH A 630 . ? 1_555 ? 3 AC1 6 HOH F . ? HOH A 631 . ? 4_455 ? 4 AC1 6 HOH F . ? HOH A 642 . ? 1_555 ? 5 AC1 6 HOH F . ? HOH A 654 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH A 673 . ? 1_555 ? 7 AC2 6 HOH F . ? HOH A 585 . ? 1_555 ? 8 AC2 6 HOH F . ? HOH A 606 . ? 1_555 ? 9 AC2 6 HOH F . ? HOH A 674 . ? 1_555 ? 10 AC2 6 HOH F . ? HOH A 675 . ? 1_555 ? 11 AC2 6 HOH G . ? HOH B 632 . ? 1_555 ? 12 AC2 6 HOH G . ? HOH B 633 . ? 1_555 ? 13 AC3 5 HOH F . ? HOH A 676 . ? 1_555 ? 14 AC3 5 HOH F . ? HOH A 677 . ? 1_555 ? 15 AC3 5 HOH G . ? HOH B 560 . ? 3_545 ? 16 AC3 5 HOH G . ? HOH B 627 . ? 3_545 ? 17 AC3 5 HOH G . ? HOH B 629 . ? 3_545 ? # _database_PDB_matrix.entry_id 3BQP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3BQP _atom_sites.fract_transf_matrix[1][1] 0.024722 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016273 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015487 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 CYS 47 47 47 CYS CYS A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 CYS 72 72 72 CYS CYS A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 CYS 78 78 78 CYS CYS A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 SER 80 80 80 SER SER A . n B 1 1 ASP 1 1 1 ASP ASP B . n B 1 2 GLY 2 2 2 GLY GLY B . n B 1 3 GLY 3 3 3 GLY GLY B . n B 1 4 PHE 4 4 4 PHE PHE B . n B 1 5 CYS 5 5 5 CYS CYS B . n B 1 6 GLU 6 6 6 GLU GLU B . n B 1 7 VAL 7 7 7 VAL VAL B . n B 1 8 CYS 8 8 8 CYS CYS B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 LYS 10 10 10 LYS LYS B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 GLY 13 13 13 GLY GLY B . n B 1 14 TYR 14 14 14 TYR TYR B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 ASP 16 16 16 ASP ASP B . n B 1 17 ARG 17 17 17 ARG ARG B . n B 1 18 ASN 18 18 18 ASN ASN B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 GLU 20 20 20 GLU GLU B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 THR 24 24 24 THR THR B . n B 1 25 LYS 25 25 25 LYS LYS B . n B 1 26 GLN 26 26 26 GLN GLN B . n B 1 27 GLU 27 27 27 GLU GLU B . n B 1 28 ILE 28 28 28 ILE ILE B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 ALA 30 30 30 ALA ALA B . n B 1 31 ALA 31 31 31 ALA ALA B . n B 1 32 LEU 32 32 32 LEU LEU B . n B 1 33 GLU 33 33 33 GLU GLU B . n B 1 34 LYS 34 34 34 LYS LYS B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 CYS 36 36 36 CYS CYS B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 PHE 38 38 38 PHE PHE B . n B 1 39 LEU 39 39 39 LEU LEU B . n B 1 40 PRO 40 40 40 PRO PRO B . n B 1 41 ASP 41 41 41 ASP ASP B . n B 1 42 PRO 42 42 42 PRO PRO B . n B 1 43 TYR 43 43 43 TYR TYR B . n B 1 44 GLN 44 44 44 GLN GLN B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 GLN 46 46 46 GLN GLN B . n B 1 47 CYS 47 47 47 CYS CYS B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 GLN 49 49 49 GLN GLN B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 GLU 53 53 53 GLU GLU B . n B 1 54 TYR 54 54 54 TYR TYR B . n B 1 55 GLU 55 55 55 GLU GLU B . n B 1 56 PRO 56 56 56 PRO PRO B . n B 1 57 VAL 57 57 57 VAL VAL B . n B 1 58 LEU 58 58 58 LEU LEU B . n B 1 59 ILE 59 59 59 ILE ILE B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 VAL 63 63 63 VAL VAL B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 VAL 65 65 65 VAL VAL B . n B 1 66 MET 66 66 66 MET MET B . n B 1 67 ASP 67 67 67 ASP ASP B . n B 1 68 PRO 68 68 68 PRO PRO B . n B 1 69 SER 69 69 69 SER SER B . n B 1 70 PHE 70 70 70 PHE PHE B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 CYS 72 72 72 CYS CYS B . n B 1 73 LEU 73 73 73 LEU LEU B . n B 1 74 LYS 74 74 74 LYS LYS B . n B 1 75 ILE 75 75 75 ILE ILE B . n B 1 76 GLY 76 76 76 GLY GLY B . n B 1 77 ALA 77 77 77 ALA ALA B . n B 1 78 CYS 78 78 78 CYS CYS B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 SER 80 80 80 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 81 1 MG MG A . D 2 MG 1 82 2 MG MG A . E 2 MG 1 83 3 MG MG A . F 3 HOH 1 501 501 HOH HOH A . F 3 HOH 2 503 503 HOH HOH A . F 3 HOH 3 505 505 HOH HOH A . F 3 HOH 4 507 507 HOH HOH A . F 3 HOH 5 508 508 HOH HOH A . F 3 HOH 6 509 509 HOH HOH A . F 3 HOH 7 510 510 HOH HOH A . F 3 HOH 8 511 511 HOH HOH A . F 3 HOH 9 518 518 HOH HOH A . F 3 HOH 10 519 519 HOH HOH A . F 3 HOH 11 520 520 HOH HOH A . F 3 HOH 12 524 524 HOH HOH A . F 3 HOH 13 525 525 HOH HOH A . F 3 HOH 14 527 527 HOH HOH A . F 3 HOH 15 528 528 HOH HOH A . F 3 HOH 16 529 529 HOH HOH A . F 3 HOH 17 530 530 HOH HOH A . F 3 HOH 18 531 531 HOH HOH A . F 3 HOH 19 533 533 HOH HOH A . F 3 HOH 20 534 534 HOH HOH A . F 3 HOH 21 538 538 HOH HOH A . F 3 HOH 22 539 539 HOH HOH A . F 3 HOH 23 540 540 HOH HOH A . F 3 HOH 24 541 541 HOH HOH A . F 3 HOH 25 543 543 HOH HOH A . F 3 HOH 26 546 546 HOH HOH A . F 3 HOH 27 552 552 HOH HOH A . F 3 HOH 28 553 553 HOH HOH A . F 3 HOH 29 555 555 HOH HOH A . F 3 HOH 30 557 557 HOH HOH A . F 3 HOH 31 559 559 HOH HOH A . F 3 HOH 32 561 561 HOH HOH A . F 3 HOH 33 562 562 HOH HOH A . F 3 HOH 34 564 564 HOH HOH A . F 3 HOH 35 565 565 HOH HOH A . F 3 HOH 36 566 566 HOH HOH A . F 3 HOH 37 567 567 HOH HOH A . F 3 HOH 38 571 571 HOH HOH A . F 3 HOH 39 573 573 HOH HOH A . F 3 HOH 40 577 577 HOH HOH A . F 3 HOH 41 580 580 HOH HOH A . F 3 HOH 42 584 584 HOH HOH A . F 3 HOH 43 585 585 HOH HOH A . F 3 HOH 44 586 586 HOH HOH A . F 3 HOH 45 587 587 HOH HOH A . F 3 HOH 46 588 588 HOH HOH A . F 3 HOH 47 589 589 HOH HOH A . F 3 HOH 48 590 590 HOH HOH A . F 3 HOH 49 591 591 HOH HOH A . F 3 HOH 50 593 593 HOH HOH A . F 3 HOH 51 595 595 HOH HOH A . F 3 HOH 52 596 596 HOH HOH A . F 3 HOH 53 599 599 HOH HOH A . F 3 HOH 54 600 600 HOH HOH A . F 3 HOH 55 602 602 HOH HOH A . F 3 HOH 56 603 603 HOH HOH A . F 3 HOH 57 605 605 HOH HOH A . F 3 HOH 58 606 606 HOH HOH A . F 3 HOH 59 607 607 HOH HOH A . F 3 HOH 60 611 611 HOH HOH A . F 3 HOH 61 613 613 HOH HOH A . F 3 HOH 62 614 614 HOH HOH A . F 3 HOH 63 615 615 HOH HOH A . F 3 HOH 64 616 616 HOH HOH A . F 3 HOH 65 619 619 HOH HOH A . F 3 HOH 66 623 623 HOH HOH A . F 3 HOH 67 628 628 HOH HOH A . F 3 HOH 68 630 630 HOH HOH A . F 3 HOH 69 631 631 HOH HOH A . F 3 HOH 70 634 634 HOH HOH A . F 3 HOH 71 635 635 HOH HOH A . F 3 HOH 72 638 638 HOH HOH A . F 3 HOH 73 639 639 HOH HOH A . F 3 HOH 74 642 642 HOH HOH A . F 3 HOH 75 643 643 HOH HOH A . F 3 HOH 76 645 645 HOH HOH A . F 3 HOH 77 646 646 HOH HOH A . F 3 HOH 78 649 649 HOH HOH A . F 3 HOH 79 650 650 HOH HOH A . F 3 HOH 80 651 651 HOH HOH A . F 3 HOH 81 653 653 HOH HOH A . F 3 HOH 82 654 654 HOH HOH A . F 3 HOH 83 655 655 HOH HOH A . F 3 HOH 84 656 656 HOH HOH A . F 3 HOH 85 658 658 HOH HOH A . F 3 HOH 86 660 660 HOH HOH A . F 3 HOH 87 667 667 HOH HOH A . F 3 HOH 88 669 669 HOH HOH A . F 3 HOH 89 670 670 HOH HOH A . F 3 HOH 90 671 671 HOH HOH A . F 3 HOH 91 673 673 HOH HOH A . F 3 HOH 92 674 674 HOH HOH A . F 3 HOH 93 675 675 HOH HOH A . F 3 HOH 94 676 676 HOH HOH A . F 3 HOH 95 677 677 HOH HOH A . F 3 HOH 96 679 679 HOH HOH A . F 3 HOH 97 681 681 HOH HOH A . F 3 HOH 98 682 682 HOH HOH A . F 3 HOH 99 683 683 HOH HOH A . F 3 HOH 100 685 685 HOH HOH A . F 3 HOH 101 687 687 HOH HOH A . F 3 HOH 102 688 688 HOH HOH A . F 3 HOH 103 690 690 HOH HOH A . F 3 HOH 104 692 692 HOH HOH A . F 3 HOH 105 693 693 HOH HOH A . G 3 HOH 1 502 502 HOH HOH B . G 3 HOH 2 504 504 HOH HOH B . G 3 HOH 3 506 506 HOH HOH B . G 3 HOH 4 512 512 HOH HOH B . G 3 HOH 5 513 513 HOH HOH B . G 3 HOH 6 514 514 HOH HOH B . G 3 HOH 7 515 515 HOH HOH B . G 3 HOH 8 516 516 HOH HOH B . G 3 HOH 9 517 517 HOH HOH B . G 3 HOH 10 521 521 HOH HOH B . G 3 HOH 11 522 522 HOH HOH B . G 3 HOH 12 523 523 HOH HOH B . G 3 HOH 13 526 526 HOH HOH B . G 3 HOH 14 532 532 HOH HOH B . G 3 HOH 15 535 535 HOH HOH B . G 3 HOH 16 536 536 HOH HOH B . G 3 HOH 17 537 537 HOH HOH B . G 3 HOH 18 542 542 HOH HOH B . G 3 HOH 19 544 544 HOH HOH B . G 3 HOH 20 545 545 HOH HOH B . G 3 HOH 21 547 547 HOH HOH B . G 3 HOH 22 548 548 HOH HOH B . G 3 HOH 23 549 549 HOH HOH B . G 3 HOH 24 550 550 HOH HOH B . G 3 HOH 25 551 551 HOH HOH B . G 3 HOH 26 554 554 HOH HOH B . G 3 HOH 27 556 556 HOH HOH B . G 3 HOH 28 558 558 HOH HOH B . G 3 HOH 29 560 560 HOH HOH B . G 3 HOH 30 563 563 HOH HOH B . G 3 HOH 31 568 568 HOH HOH B . G 3 HOH 32 569 569 HOH HOH B . G 3 HOH 33 570 570 HOH HOH B . G 3 HOH 34 572 572 HOH HOH B . G 3 HOH 35 574 574 HOH HOH B . G 3 HOH 36 575 575 HOH HOH B . G 3 HOH 37 576 576 HOH HOH B . G 3 HOH 38 578 578 HOH HOH B . G 3 HOH 39 579 579 HOH HOH B . G 3 HOH 40 581 581 HOH HOH B . G 3 HOH 41 582 582 HOH HOH B . G 3 HOH 42 583 583 HOH HOH B . G 3 HOH 43 592 592 HOH HOH B . G 3 HOH 44 594 594 HOH HOH B . G 3 HOH 45 597 597 HOH HOH B . G 3 HOH 46 601 601 HOH HOH B . G 3 HOH 47 604 604 HOH HOH B . G 3 HOH 48 608 608 HOH HOH B . G 3 HOH 49 609 609 HOH HOH B . G 3 HOH 50 610 610 HOH HOH B . G 3 HOH 51 612 612 HOH HOH B . G 3 HOH 52 617 617 HOH HOH B . G 3 HOH 53 618 618 HOH HOH B . G 3 HOH 54 620 620 HOH HOH B . G 3 HOH 55 621 621 HOH HOH B . G 3 HOH 56 622 622 HOH HOH B . G 3 HOH 57 624 624 HOH HOH B . G 3 HOH 58 625 625 HOH HOH B . G 3 HOH 59 626 626 HOH HOH B . G 3 HOH 60 627 627 HOH HOH B . G 3 HOH 61 629 629 HOH HOH B . G 3 HOH 62 632 632 HOH HOH B . G 3 HOH 63 633 633 HOH HOH B . G 3 HOH 64 636 636 HOH HOH B . G 3 HOH 65 637 637 HOH HOH B . G 3 HOH 66 640 640 HOH HOH B . G 3 HOH 67 641 641 HOH HOH B . G 3 HOH 68 644 644 HOH HOH B . G 3 HOH 69 647 647 HOH HOH B . G 3 HOH 70 648 648 HOH HOH B . G 3 HOH 71 652 652 HOH HOH B . G 3 HOH 72 657 657 HOH HOH B . G 3 HOH 73 659 659 HOH HOH B . G 3 HOH 74 661 661 HOH HOH B . G 3 HOH 75 662 662 HOH HOH B . G 3 HOH 76 664 664 HOH HOH B . G 3 HOH 77 665 665 HOH HOH B . G 3 HOH 78 666 666 HOH HOH B . G 3 HOH 79 668 668 HOH HOH B . G 3 HOH 80 672 672 HOH HOH B . G 3 HOH 81 678 678 HOH HOH B . G 3 HOH 82 680 680 HOH HOH B . G 3 HOH 83 684 684 HOH HOH B . G 3 HOH 84 686 686 HOH HOH B . G 3 HOH 85 689 689 HOH HOH B . G 3 HOH 86 691 691 HOH HOH B . G 3 HOH 87 694 694 HOH HOH B . G 3 HOH 88 695 695 HOH HOH B . G 3 HOH 89 696 696 HOH HOH B . G 3 HOH 90 697 697 HOH HOH B . G 3 HOH 91 698 698 HOH HOH B . G 3 HOH 92 700 700 HOH HOH B . G 3 HOH 93 701 701 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F 2 1 B,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? F HOH . ? A HOH 642 ? 1_555 MG ? C MG . ? A MG 81 ? 1_555 O ? F HOH . ? A HOH 630 ? 1_555 85.0 ? 2 O ? F HOH . ? A HOH 642 ? 1_555 MG ? C MG . ? A MG 81 ? 1_555 O ? F HOH . ? A HOH 673 ? 1_555 85.5 ? 3 O ? F HOH . ? A HOH 630 ? 1_555 MG ? C MG . ? A MG 81 ? 1_555 O ? F HOH . ? A HOH 673 ? 1_555 90.5 ? 4 O ? F HOH . ? A HOH 642 ? 1_555 MG ? C MG . ? A MG 81 ? 1_555 O ? F HOH . ? A HOH 654 ? 1_555 167.7 ? 5 O ? F HOH . ? A HOH 630 ? 1_555 MG ? C MG . ? A MG 81 ? 1_555 O ? F HOH . ? A HOH 654 ? 1_555 90.3 ? 6 O ? F HOH . ? A HOH 673 ? 1_555 MG ? C MG . ? A MG 81 ? 1_555 O ? F HOH . ? A HOH 654 ? 1_555 106.0 ? 7 O ? F HOH . ? A HOH 674 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? F HOH . ? A HOH 675 ? 1_555 87.7 ? 8 O ? F HOH . ? A HOH 674 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? F HOH . ? A HOH 585 ? 1_555 91.0 ? 9 O ? F HOH . ? A HOH 675 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? F HOH . ? A HOH 585 ? 1_555 87.7 ? 10 O ? F HOH . ? A HOH 674 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? G HOH . ? B HOH 633 ? 1_555 91.2 ? 11 O ? F HOH . ? A HOH 675 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? G HOH . ? B HOH 633 ? 1_555 175.7 ? 12 O ? F HOH . ? A HOH 585 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? G HOH . ? B HOH 633 ? 1_555 88.2 ? 13 O ? F HOH . ? A HOH 674 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? G HOH . ? B HOH 632 ? 1_555 95.1 ? 14 O ? F HOH . ? A HOH 675 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? G HOH . ? B HOH 632 ? 1_555 94.4 ? 15 O ? F HOH . ? A HOH 585 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? G HOH . ? B HOH 632 ? 1_555 173.6 ? 16 O ? G HOH . ? B HOH 633 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? G HOH . ? B HOH 632 ? 1_555 89.9 ? 17 O ? F HOH . ? A HOH 674 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? F HOH . ? A HOH 606 ? 1_555 175.1 ? 18 O ? F HOH . ? A HOH 675 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? F HOH . ? A HOH 606 ? 1_555 89.6 ? 19 O ? F HOH . ? A HOH 585 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? F HOH . ? A HOH 606 ? 1_555 84.8 ? 20 O ? G HOH . ? B HOH 633 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? F HOH . ? A HOH 606 ? 1_555 91.2 ? 21 O ? G HOH . ? B HOH 632 ? 1_555 MG ? D MG . ? A MG 82 ? 1_555 O ? F HOH . ? A HOH 606 ? 1_555 89.2 ? 22 O ? F HOH . ? A HOH 676 ? 1_555 MG ? E MG . ? A MG 83 ? 1_555 O ? F HOH . ? A HOH 677 ? 1_555 87.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 HKL-3000 'data collection' . ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 SHELX phasing . ? 6 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 11 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 B _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 11 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 B _pdbx_validate_rmsd_angle.auth_atom_id_3 CD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 11 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 B _pdbx_validate_rmsd_angle.angle_value 95.63 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation -15.37 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 21 ? CG ? A LYS 21 CG 2 1 Y 1 A LYS 21 ? CD ? A LYS 21 CD 3 1 Y 1 A LYS 21 ? CE ? A LYS 21 CE 4 1 Y 1 A LYS 21 ? NZ ? A LYS 21 NZ 5 1 Y 1 A ASN 22 ? CG ? A ASN 22 CG 6 1 Y 1 A ASN 22 ? OD1 ? A ASN 22 OD1 7 1 Y 1 A ASN 22 ? ND2 ? A ASN 22 ND2 8 1 Y 1 A LYS 34 ? CG ? A LYS 34 CG 9 1 Y 1 A LYS 34 ? CD ? A LYS 34 CD 10 1 Y 1 A LYS 34 ? CE ? A LYS 34 CE 11 1 Y 1 A LYS 34 ? NZ ? A LYS 34 NZ 12 1 Y 1 A GLU 64 ? CG ? A GLU 64 CG 13 1 Y 1 A GLU 64 ? CD ? A GLU 64 CD 14 1 Y 1 A GLU 64 ? OE1 ? A GLU 64 OE1 15 1 Y 1 A GLU 64 ? OE2 ? A GLU 64 OE2 16 1 Y 1 B GLU 20 ? CB ? B GLU 20 CB 17 1 Y 1 B GLU 20 ? CG ? B GLU 20 CG 18 1 Y 1 B GLU 20 ? CD ? B GLU 20 CD 19 1 Y 1 B GLU 20 ? OE1 ? B GLU 20 OE1 20 1 Y 1 B GLU 20 ? OE2 ? B GLU 20 OE2 21 1 Y 1 B LYS 21 ? CB ? B LYS 21 CB 22 1 Y 1 B LYS 21 ? CG ? B LYS 21 CG 23 1 Y 1 B LYS 21 ? CD ? B LYS 21 CD 24 1 Y 1 B LYS 21 ? CE ? B LYS 21 CE 25 1 Y 1 B LYS 21 ? NZ ? B LYS 21 NZ 26 1 Y 1 B ASN 22 ? CB ? B ASN 22 CB 27 1 Y 1 B ASN 22 ? CG ? B ASN 22 CG 28 1 Y 1 B ASN 22 ? OD1 ? B ASN 22 OD1 29 1 Y 1 B ASN 22 ? ND2 ? B ASN 22 ND2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH #