data_3CCD # _entry.id 3CCD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CCD pdb_00003ccd 10.2210/pdb3ccd/pdb RCSB RCSB046605 ? ? WWPDB D_1000046605 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1CM2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3CCD _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-02-25 _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Napper, S.' 1 'Prasad, L.' 2 'Delbaere, L.T.J.' 3 # _citation.id primary _citation.title ;Structural investigation of a phosphorylation-catalyzed, isoaspartate-free, protein succinimide: crystallographic structure of post-succinimide His15Asp histidine-containing protein ; _citation.journal_abbrev Biochemistry _citation.journal_volume 47 _citation.page_first 9486 _citation.page_last 9496 _citation.year 2008 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18702519 _citation.pdbx_database_id_DOI 10.1021/bi800847a # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Napper, S.' 1 ? primary 'Prasad, L.' 2 ? primary 'Delbaere, L.T.' 3 ? # _cell.entry_id 3CCD _cell.length_a 33.658 _cell.length_b 42.299 _cell.length_c 48.297 _cell.angle_alpha 90.00 _cell.angle_beta 89.95 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CCD _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 4 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phosphocarrier protein HPr' 9107.259 2 2.7.11.- His15Asp ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 water nat water 18.015 199 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Histidine-containing protein' # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.2.7.11.- # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MFEQEVTITAPNGLDTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKL MAELE ; _entity_poly.pdbx_seq_one_letter_code_can ;MFEQEVTITAPNGLDTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKL MAELE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PHE n 1 3 GLU n 1 4 GLN n 1 5 GLU n 1 6 VAL n 1 7 THR n 1 8 ILE n 1 9 THR n 1 10 ALA n 1 11 PRO n 1 12 ASN n 1 13 GLY n 1 14 LEU n 1 15 ASP n 1 16 THR n 1 17 ARG n 1 18 PRO n 1 19 ALA n 1 20 ALA n 1 21 GLN n 1 22 PHE n 1 23 VAL n 1 24 LYS n 1 25 GLU n 1 26 ALA n 1 27 LYS n 1 28 GLY n 1 29 PHE n 1 30 THR n 1 31 SER n 1 32 GLU n 1 33 ILE n 1 34 THR n 1 35 VAL n 1 36 THR n 1 37 SER n 1 38 ASN n 1 39 GLY n 1 40 LYS n 1 41 SER n 1 42 ALA n 1 43 SER n 1 44 ALA n 1 45 LYS n 1 46 SER n 1 47 LEU n 1 48 PHE n 1 49 LYS n 1 50 LEU n 1 51 GLN n 1 52 THR n 1 53 LEU n 1 54 GLY n 1 55 LEU n 1 56 THR n 1 57 GLN n 1 58 GLY n 1 59 THR n 1 60 VAL n 1 61 VAL n 1 62 THR n 1 63 ILE n 1 64 SER n 1 65 ALA n 1 66 GLU n 1 67 GLY n 1 68 GLU n 1 69 ASP n 1 70 GLU n 1 71 GLN n 1 72 LYS n 1 73 ALA n 1 74 VAL n 1 75 GLU n 1 76 HIS n 1 77 LEU n 1 78 VAL n 1 79 LYS n 1 80 LEU n 1 81 MET n 1 82 ALA n 1 83 GLU n 1 84 LEU n 1 85 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ptsH, hpr' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ESK108 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'puc19(ptsH)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code PTHP_ECOLI _struct_ref.pdbx_db_accession P0AA04 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKL MAELE ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CCD A 1 ? 85 ? P0AA04 1 ? 85 ? 1 85 2 1 3CCD B 1 ? 85 ? P0AA04 1 ? 85 ? 1 85 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CCD GLU A 3 ? UNP P0AA04 GLN 3 variant 3 1 1 3CCD ASP A 15 ? UNP P0AA04 HIS 15 'engineered mutation' 15 2 2 3CCD GLU B 3 ? UNP P0AA04 GLN 3 variant 3 3 2 3CCD ASP B 15 ? UNP P0AA04 HIS 15 'engineered mutation' 15 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3CCD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_percent_sol 34.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 287 _exptl_crystal_grow.pH 4.4 _exptl_crystal_grow.pdbx_details '0.1M citrate phosphate buffer, 25% saturated ammonium sulphate, pH 4.4, VAPOR DIFFUSION, HANGING DROP, temperature 287K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-02-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength .9984 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list .9984 # _reflns.entry_id 3CCD _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.00 _reflns.d_resolution_low 48.3 _reflns.number_all 73053 _reflns.number_obs 73053 _reflns.percent_possible_obs 71 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value .021 _reflns.pdbx_netI_over_sigmaI 16.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.00 _reflns_shell.d_res_low 1.06 _reflns_shell.percent_possible_all 23 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value .15 _reflns_shell.meanI_over_sigI_obs 4 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 944 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CCD _refine.ls_number_reflns_obs 57397 _refine.ls_number_reflns_all 57397 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 26.33 _refine.ls_d_res_high 1.00 _refine.ls_percent_reflns_obs 82.78 _refine.ls_R_factor_obs 0.19152 _refine.ls_R_factor_all 0.19152 _refine.ls_R_factor_R_work 0.1908 _refine.ls_R_factor_R_free 0.20502 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 3063 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.948 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.B_iso_mean 9.710 _refine.aniso_B[1][1] 0.03 _refine.aniso_B[2][2] -0.03 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.02 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'pdb entry 1opd' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.038 _refine.pdbx_overall_ESU_R_Free 0.036 _refine.overall_SU_ML 0.019 _refine.overall_SU_B 0.689 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3CCD _refine_analyze.Luzzati_coordinate_error_obs .038 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1308 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 199 _refine_hist.number_atoms_total 1517 _refine_hist.d_res_high 1.00 _refine_hist.d_res_low 26.33 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 1330 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.193 1.982 ? 1802 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.991 5.000 ? 177 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.817 26.923 ? 52 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.391 15.000 ? 249 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7.886 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.087 0.200 ? 219 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 960 'X-RAY DIFFRACTION' ? r_nbd_refined 0.201 0.200 ? 650 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.295 0.200 ? 945 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.112 0.200 ? 141 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.305 0.200 ? 72 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.090 0.200 ? 52 'X-RAY DIFFRACTION' ? r_mcbond_it 0.820 1.500 ? 893 'X-RAY DIFFRACTION' ? r_mcangle_it 1.232 2.000 ? 1385 'X-RAY DIFFRACTION' ? r_scbond_it 1.765 3.000 ? 484 'X-RAY DIFFRACTION' ? r_scangle_it 2.619 4.500 ? 412 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.00 _refine_ls_shell.d_res_low 1.03 _refine_ls_shell.number_reflns_R_work 518 _refine_ls_shell.R_factor_R_work 0.262 _refine_ls_shell.percent_reflns_obs 10.57 _refine_ls_shell.R_factor_R_free 0.266 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 3063 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3CCD _struct.title '1.0 A Structure of Post-Succinimide His15Asp HPr' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CCD _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'succinimide, isoaspartate, protein damage, autophosphatase, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 15 ? LYS A 27 ? ASP A 15 LYS A 27 1 ? 13 HELX_P HELX_P2 2 SER A 46 ? GLN A 51 ? SER A 46 GLN A 51 1 ? 6 HELX_P HELX_P3 3 ASP A 69 ? ALA A 82 ? ASP A 69 ALA A 82 1 ? 14 HELX_P HELX_P4 4 ASP B 15 ? LYS B 27 ? ASP B 15 LYS B 27 1 ? 13 HELX_P HELX_P5 5 SER B 46 ? GLN B 51 ? SER B 46 GLN B 51 1 ? 6 HELX_P HELX_P6 6 ASP B 69 ? ALA B 82 ? ASP B 69 ALA B 82 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 2 ? THR A 7 ? PHE A 2 THR A 7 A 2 VAL A 60 ? GLU A 66 ? VAL A 60 GLU A 66 A 3 GLU A 32 ? SER A 37 ? GLU A 32 SER A 37 A 4 LYS A 40 ? SER A 43 ? LYS A 40 SER A 43 B 1 PHE B 2 ? THR B 7 ? PHE B 2 THR B 7 B 2 VAL B 60 ? GLU B 66 ? VAL B 60 GLU B 66 B 3 GLU B 32 ? SER B 37 ? GLU B 32 SER B 37 B 4 LYS B 40 ? SER B 43 ? LYS B 40 SER B 43 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 4 ? N GLN A 4 O ILE A 63 ? O ILE A 63 A 2 3 O SER A 64 ? O SER A 64 N THR A 34 ? N THR A 34 A 3 4 N VAL A 35 ? N VAL A 35 O ALA A 42 ? O ALA A 42 B 1 2 N GLN B 4 ? N GLN B 4 O ILE B 63 ? O ILE B 63 B 2 3 O SER B 64 ? O SER B 64 N THR B 34 ? N THR B 34 B 3 4 N VAL B 35 ? N VAL B 35 O ALA B 42 ? O ALA B 42 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B SO4 6576 ? 5 'BINDING SITE FOR RESIDUE SO4 B 6576' AC2 Software A SO4 6577 ? 5 'BINDING SITE FOR RESIDUE SO4 A 6577' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LYS B 27 ? LYS B 27 . ? 1_555 ? 2 AC1 5 LYS B 45 ? LYS B 45 . ? 1_555 ? 3 AC1 5 SER B 46 ? SER B 46 . ? 1_555 ? 4 AC1 5 LEU B 47 ? LEU B 47 . ? 1_555 ? 5 AC1 5 PHE B 48 ? PHE B 48 . ? 1_555 ? 6 AC2 5 LYS A 27 ? LYS A 27 . ? 1_555 ? 7 AC2 5 LYS A 45 ? LYS A 45 . ? 1_555 ? 8 AC2 5 SER A 46 ? SER A 46 . ? 1_555 ? 9 AC2 5 LEU A 47 ? LEU A 47 . ? 1_555 ? 10 AC2 5 LYS B 49 ? LYS B 49 . ? 1_545 ? # _atom_sites.entry_id 3CCD _atom_sites.fract_transf_matrix[1][1] 0.029711 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] -0.000026 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023641 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020705 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 HIS 76 76 76 HIS HIS A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 MET 81 81 81 MET MET A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 GLU 85 85 85 GLU GLU A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 PHE 2 2 2 PHE PHE B . n B 1 3 GLU 3 3 3 GLU GLU B . n B 1 4 GLN 4 4 4 GLN GLN B . n B 1 5 GLU 5 5 5 GLU GLU B . n B 1 6 VAL 6 6 6 VAL VAL B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 ILE 8 8 8 ILE ILE B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 PRO 11 11 11 PRO PRO B . n B 1 12 ASN 12 12 12 ASN ASN B . n B 1 13 GLY 13 13 13 GLY GLY B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 ASP 15 15 15 ASP ASP B . n B 1 16 THR 16 16 16 THR THR B . n B 1 17 ARG 17 17 17 ARG ARG B . n B 1 18 PRO 18 18 18 PRO PRO B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 GLN 21 21 21 GLN GLN B . n B 1 22 PHE 22 22 22 PHE PHE B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 GLU 25 25 25 GLU GLU B . n B 1 26 ALA 26 26 26 ALA ALA B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 PHE 29 29 29 PHE PHE B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 SER 31 31 31 SER SER B . n B 1 32 GLU 32 32 32 GLU GLU B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 THR 34 34 34 THR THR B . n B 1 35 VAL 35 35 35 VAL VAL B . n B 1 36 THR 36 36 36 THR THR B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 ASN 38 38 38 ASN ASN B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 LYS 40 40 40 LYS LYS B . n B 1 41 SER 41 41 41 SER SER B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 SER 43 43 43 SER SER B . n B 1 44 ALA 44 44 44 ALA ALA B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 SER 46 46 46 SER SER B . n B 1 47 LEU 47 47 47 LEU LEU B . n B 1 48 PHE 48 48 48 PHE PHE B . n B 1 49 LYS 49 49 49 LYS LYS B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 GLN 51 51 51 GLN GLN B . n B 1 52 THR 52 52 52 THR THR B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 GLY 54 54 54 GLY GLY B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 THR 56 56 56 THR THR B . n B 1 57 GLN 57 57 57 GLN GLN B . n B 1 58 GLY 58 58 58 GLY GLY B . n B 1 59 THR 59 59 59 THR THR B . n B 1 60 VAL 60 60 60 VAL VAL B . n B 1 61 VAL 61 61 61 VAL VAL B . n B 1 62 THR 62 62 62 THR THR B . n B 1 63 ILE 63 63 63 ILE ILE B . n B 1 64 SER 64 64 64 SER SER B . n B 1 65 ALA 65 65 65 ALA ALA B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 GLU 68 68 68 GLU GLU B . n B 1 69 ASP 69 69 69 ASP ASP B . n B 1 70 GLU 70 70 70 GLU GLU B . n B 1 71 GLN 71 71 71 GLN GLN B . n B 1 72 LYS 72 72 72 LYS LYS B . n B 1 73 ALA 73 73 73 ALA ALA B . n B 1 74 VAL 74 74 74 VAL VAL B . n B 1 75 GLU 75 75 75 GLU GLU B . n B 1 76 HIS 76 76 76 HIS HIS B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 VAL 78 78 78 VAL VAL B . n B 1 79 LYS 79 79 79 LYS LYS B . n B 1 80 LEU 80 80 80 LEU LEU B . n B 1 81 MET 81 81 81 MET MET B . n B 1 82 ALA 82 82 82 ALA ALA B . n B 1 83 GLU 83 83 83 GLU GLU B . n B 1 84 LEU 84 84 84 LEU LEU B . n B 1 85 GLU 85 85 85 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 6577 6577 SO4 SO4 A . D 2 SO4 1 6576 6576 SO4 SO4 B . E 3 HOH 1 6578 3 HOH HOH A . E 3 HOH 2 6579 6 HOH HOH A . E 3 HOH 3 6580 8 HOH HOH A . E 3 HOH 4 6581 10 HOH HOH A . E 3 HOH 5 6582 15 HOH HOH A . E 3 HOH 6 6583 16 HOH HOH A . E 3 HOH 7 6584 18 HOH HOH A . E 3 HOH 8 6585 21 HOH HOH A . E 3 HOH 9 6586 22 HOH HOH A . E 3 HOH 10 6587 24 HOH HOH A . E 3 HOH 11 6588 27 HOH HOH A . E 3 HOH 12 6589 28 HOH HOH A . E 3 HOH 13 6590 31 HOH HOH A . E 3 HOH 14 6591 34 HOH HOH A . E 3 HOH 15 6592 35 HOH HOH A . E 3 HOH 16 6593 36 HOH HOH A . E 3 HOH 17 6594 38 HOH HOH A . E 3 HOH 18 6595 43 HOH HOH A . E 3 HOH 19 6596 45 HOH HOH A . E 3 HOH 20 6597 47 HOH HOH A . E 3 HOH 21 6598 48 HOH HOH A . E 3 HOH 22 6599 50 HOH HOH A . E 3 HOH 23 6600 52 HOH HOH A . E 3 HOH 24 6601 53 HOH HOH A . E 3 HOH 25 6602 57 HOH HOH A . E 3 HOH 26 6603 59 HOH HOH A . E 3 HOH 27 6604 60 HOH HOH A . E 3 HOH 28 6605 61 HOH HOH A . E 3 HOH 29 6606 62 HOH HOH A . E 3 HOH 30 6607 64 HOH HOH A . E 3 HOH 31 6608 67 HOH HOH A . E 3 HOH 32 6609 69 HOH HOH A . E 3 HOH 33 6610 70 HOH HOH A . E 3 HOH 34 6611 72 HOH HOH A . E 3 HOH 35 6612 73 HOH HOH A . E 3 HOH 36 6613 75 HOH HOH A . E 3 HOH 37 6614 76 HOH HOH A . E 3 HOH 38 6615 77 HOH HOH A . E 3 HOH 39 6616 78 HOH HOH A . E 3 HOH 40 6617 79 HOH HOH A . E 3 HOH 41 6618 81 HOH HOH A . E 3 HOH 42 6619 82 HOH HOH A . E 3 HOH 43 6620 86 HOH HOH A . E 3 HOH 44 6621 87 HOH HOH A . E 3 HOH 45 6622 88 HOH HOH A . E 3 HOH 46 6623 89 HOH HOH A . E 3 HOH 47 6624 90 HOH HOH A . E 3 HOH 48 6625 91 HOH HOH A . E 3 HOH 49 6626 92 HOH HOH A . E 3 HOH 50 6627 95 HOH HOH A . E 3 HOH 51 6628 96 HOH HOH A . E 3 HOH 52 6629 97 HOH HOH A . E 3 HOH 53 6630 106 HOH HOH A . E 3 HOH 54 6631 108 HOH HOH A . E 3 HOH 55 6632 110 HOH HOH A . E 3 HOH 56 6633 113 HOH HOH A . E 3 HOH 57 6634 114 HOH HOH A . E 3 HOH 58 6635 116 HOH HOH A . E 3 HOH 59 6636 117 HOH HOH A . E 3 HOH 60 6637 120 HOH HOH A . E 3 HOH 61 6638 123 HOH HOH A . E 3 HOH 62 6639 124 HOH HOH A . E 3 HOH 63 6640 127 HOH HOH A . E 3 HOH 64 6641 128 HOH HOH A . E 3 HOH 65 6642 129 HOH HOH A . E 3 HOH 66 6643 132 HOH HOH A . E 3 HOH 67 6644 137 HOH HOH A . E 3 HOH 68 6645 140 HOH HOH A . E 3 HOH 69 6646 148 HOH HOH A . E 3 HOH 70 6647 152 HOH HOH A . E 3 HOH 71 6648 153 HOH HOH A . E 3 HOH 72 6649 156 HOH HOH A . E 3 HOH 73 6650 159 HOH HOH A . E 3 HOH 74 6651 160 HOH HOH A . E 3 HOH 75 6652 162 HOH HOH A . E 3 HOH 76 6653 163 HOH HOH A . E 3 HOH 77 6654 174 HOH HOH A . E 3 HOH 78 6655 175 HOH HOH A . E 3 HOH 79 6656 176 HOH HOH A . E 3 HOH 80 6657 177 HOH HOH A . E 3 HOH 81 6658 179 HOH HOH A . E 3 HOH 82 6659 184 HOH HOH A . E 3 HOH 83 6660 187 HOH HOH A . E 3 HOH 84 6661 188 HOH HOH A . E 3 HOH 85 6662 189 HOH HOH A . E 3 HOH 86 6663 190 HOH HOH A . E 3 HOH 87 6664 192 HOH HOH A . E 3 HOH 88 6665 196 HOH HOH A . E 3 HOH 89 6666 209 HOH HOH A . E 3 HOH 90 6667 210 HOH HOH A . E 3 HOH 91 6668 212 HOH HOH A . E 3 HOH 92 6669 215 HOH HOH A . E 3 HOH 93 6670 219 HOH HOH A . E 3 HOH 94 6671 222 HOH HOH A . E 3 HOH 95 6672 226 HOH HOH A . E 3 HOH 96 6673 229 HOH HOH A . E 3 HOH 97 6674 232 HOH HOH A . E 3 HOH 98 6675 234 HOH HOH A . E 3 HOH 99 6676 239 HOH HOH A . E 3 HOH 100 6677 240 HOH HOH A . E 3 HOH 101 6678 242 HOH HOH A . E 3 HOH 102 6679 243 HOH HOH A . E 3 HOH 103 6680 244 HOH HOH A . E 3 HOH 104 6681 245 HOH HOH A . E 3 HOH 105 6682 249 HOH HOH A . F 3 HOH 1 6577 4 HOH HOH B . F 3 HOH 2 6578 5 HOH HOH B . F 3 HOH 3 6579 7 HOH HOH B . F 3 HOH 4 6580 9 HOH HOH B . F 3 HOH 5 6581 11 HOH HOH B . F 3 HOH 6 6582 12 HOH HOH B . F 3 HOH 7 6583 13 HOH HOH B . F 3 HOH 8 6584 14 HOH HOH B . F 3 HOH 9 6585 17 HOH HOH B . F 3 HOH 10 6586 19 HOH HOH B . F 3 HOH 11 6587 20 HOH HOH B . F 3 HOH 12 6588 23 HOH HOH B . F 3 HOH 13 6589 25 HOH HOH B . F 3 HOH 14 6590 26 HOH HOH B . F 3 HOH 15 6591 29 HOH HOH B . F 3 HOH 16 6592 30 HOH HOH B . F 3 HOH 17 6593 32 HOH HOH B . F 3 HOH 18 6594 33 HOH HOH B . F 3 HOH 19 6595 37 HOH HOH B . F 3 HOH 20 6596 39 HOH HOH B . F 3 HOH 21 6597 40 HOH HOH B . F 3 HOH 22 6598 41 HOH HOH B . F 3 HOH 23 6599 42 HOH HOH B . F 3 HOH 24 6600 44 HOH HOH B . F 3 HOH 25 6601 46 HOH HOH B . F 3 HOH 26 6602 49 HOH HOH B . F 3 HOH 27 6603 51 HOH HOH B . F 3 HOH 28 6604 54 HOH HOH B . F 3 HOH 29 6605 55 HOH HOH B . F 3 HOH 30 6606 56 HOH HOH B . F 3 HOH 31 6607 58 HOH HOH B . F 3 HOH 32 6608 63 HOH HOH B . F 3 HOH 33 6609 65 HOH HOH B . F 3 HOH 34 6610 66 HOH HOH B . F 3 HOH 35 6611 68 HOH HOH B . F 3 HOH 36 6612 71 HOH HOH B . F 3 HOH 37 6613 74 HOH HOH B . F 3 HOH 38 6614 80 HOH HOH B . F 3 HOH 39 6615 83 HOH HOH B . F 3 HOH 40 6616 84 HOH HOH B . F 3 HOH 41 6617 93 HOH HOH B . F 3 HOH 42 6618 98 HOH HOH B . F 3 HOH 43 6619 99 HOH HOH B . F 3 HOH 44 6620 100 HOH HOH B . F 3 HOH 45 6621 101 HOH HOH B . F 3 HOH 46 6622 103 HOH HOH B . F 3 HOH 47 6623 104 HOH HOH B . F 3 HOH 48 6624 107 HOH HOH B . F 3 HOH 49 6625 109 HOH HOH B . F 3 HOH 50 6626 119 HOH HOH B . F 3 HOH 51 6627 121 HOH HOH B . F 3 HOH 52 6628 122 HOH HOH B . F 3 HOH 53 6629 125 HOH HOH B . F 3 HOH 54 6630 126 HOH HOH B . F 3 HOH 55 6631 131 HOH HOH B . F 3 HOH 56 6632 134 HOH HOH B . F 3 HOH 57 6633 136 HOH HOH B . F 3 HOH 58 6634 138 HOH HOH B . F 3 HOH 59 6635 143 HOH HOH B . F 3 HOH 60 6636 144 HOH HOH B . F 3 HOH 61 6637 145 HOH HOH B . F 3 HOH 62 6638 147 HOH HOH B . F 3 HOH 63 6639 149 HOH HOH B . F 3 HOH 64 6640 154 HOH HOH B . F 3 HOH 65 6641 158 HOH HOH B . F 3 HOH 66 6642 164 HOH HOH B . F 3 HOH 67 6643 165 HOH HOH B . F 3 HOH 68 6644 167 HOH HOH B . F 3 HOH 69 6645 168 HOH HOH B . F 3 HOH 70 6646 169 HOH HOH B . F 3 HOH 71 6647 170 HOH HOH B . F 3 HOH 72 6648 172 HOH HOH B . F 3 HOH 73 6649 173 HOH HOH B . F 3 HOH 74 6650 178 HOH HOH B . F 3 HOH 75 6651 180 HOH HOH B . F 3 HOH 76 6652 181 HOH HOH B . F 3 HOH 77 6653 182 HOH HOH B . F 3 HOH 78 6654 185 HOH HOH B . F 3 HOH 79 6655 191 HOH HOH B . F 3 HOH 80 6656 194 HOH HOH B . F 3 HOH 81 6657 195 HOH HOH B . F 3 HOH 82 6658 199 HOH HOH B . F 3 HOH 83 6659 203 HOH HOH B . F 3 HOH 84 6660 206 HOH HOH B . F 3 HOH 85 6661 216 HOH HOH B . F 3 HOH 86 6662 224 HOH HOH B . F 3 HOH 87 6663 227 HOH HOH B . F 3 HOH 88 6664 231 HOH HOH B . F 3 HOH 89 6665 233 HOH HOH B . F 3 HOH 90 6666 238 HOH HOH B . F 3 HOH 91 6667 241 HOH HOH B . F 3 HOH 92 6668 246 HOH HOH B . F 3 HOH 93 6669 247 HOH HOH B . F 3 HOH 94 6670 248 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA dimeric 2 2 author_defined_assembly ? monomeric 1 3 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F 2 1 A,C,E 3 1 B,D,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 650 ? 1 MORE -30.3 ? 1 'SSA (A^2)' 9160 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OXT A GLU 85 ? ? O A HOH 6610 ? ? 2.10 2 1 OXT B GLU 85 ? ? O B HOH 6625 ? ? 2.18 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MET _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 B _pdbx_validate_rmsd_bond.auth_atom_id_2 SD _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MET _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 B _pdbx_validate_rmsd_bond.bond_value 1.409 _pdbx_validate_rmsd_bond.bond_target_value 1.807 _pdbx_validate_rmsd_bond.bond_deviation -0.398 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.026 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 MET _pdbx_validate_rmsd_angle.auth_seq_id_1 1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 B _pdbx_validate_rmsd_angle.auth_atom_id_2 SD _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 MET _pdbx_validate_rmsd_angle.auth_seq_id_2 1 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 B _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 MET _pdbx_validate_rmsd_angle.auth_seq_id_3 1 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 B _pdbx_validate_rmsd_angle.angle_value 116.41 _pdbx_validate_rmsd_angle.angle_target_value 100.20 _pdbx_validate_rmsd_angle.angle_deviation 16.21 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A MET 1 ? CA B A MET 1 CA 2 1 Y 0 A MET 1 ? CB B A MET 1 CB 3 1 Y 0 A MET 1 ? CG B A MET 1 CG 4 1 Y 0 A MET 1 ? SD B A MET 1 SD 5 1 Y 0 A MET 1 ? CE B A MET 1 CE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 SO4 S S N N 290 SO4 O1 O N N 291 SO4 O2 O N N 292 SO4 O3 O N N 293 SO4 O4 O N N 294 THR N N N N 295 THR CA C N S 296 THR C C N N 297 THR O O N N 298 THR CB C N R 299 THR OG1 O N N 300 THR CG2 C N N 301 THR OXT O N N 302 THR H H N N 303 THR H2 H N N 304 THR HA H N N 305 THR HB H N N 306 THR HG1 H N N 307 THR HG21 H N N 308 THR HG22 H N N 309 THR HG23 H N N 310 THR HXT H N N 311 VAL N N N N 312 VAL CA C N S 313 VAL C C N N 314 VAL O O N N 315 VAL CB C N N 316 VAL CG1 C N N 317 VAL CG2 C N N 318 VAL OXT O N N 319 VAL H H N N 320 VAL H2 H N N 321 VAL HA H N N 322 VAL HB H N N 323 VAL HG11 H N N 324 VAL HG12 H N N 325 VAL HG13 H N N 326 VAL HG21 H N N 327 VAL HG22 H N N 328 VAL HG23 H N N 329 VAL HXT H N N 330 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 SO4 S O1 doub N N 277 SO4 S O2 doub N N 278 SO4 S O3 sing N N 279 SO4 S O4 sing N N 280 THR N CA sing N N 281 THR N H sing N N 282 THR N H2 sing N N 283 THR CA C sing N N 284 THR CA CB sing N N 285 THR CA HA sing N N 286 THR C O doub N N 287 THR C OXT sing N N 288 THR CB OG1 sing N N 289 THR CB CG2 sing N N 290 THR CB HB sing N N 291 THR OG1 HG1 sing N N 292 THR CG2 HG21 sing N N 293 THR CG2 HG22 sing N N 294 THR CG2 HG23 sing N N 295 THR OXT HXT sing N N 296 VAL N CA sing N N 297 VAL N H sing N N 298 VAL N H2 sing N N 299 VAL CA C sing N N 300 VAL CA CB sing N N 301 VAL CA HA sing N N 302 VAL C O doub N N 303 VAL C OXT sing N N 304 VAL CB CG1 sing N N 305 VAL CB CG2 sing N N 306 VAL CB HB sing N N 307 VAL CG1 HG11 sing N N 308 VAL CG1 HG12 sing N N 309 VAL CG1 HG13 sing N N 310 VAL CG2 HG21 sing N N 311 VAL CG2 HG22 sing N N 312 VAL CG2 HG23 sing N N 313 VAL OXT HXT sing N N 314 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1OPD _pdbx_initial_refinement_model.details 'pdb entry 1opd' #