data_3CDM # _entry.id 3CDM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CDM pdb_00003cdm 10.2210/pdb3cdm/pdb NDB DD0092 ? ? RCSB RCSB046646 ? ? WWPDB D_1000046646 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3CCO _pdbx_database_related.details 'Human Telomeric Sequence bound to same ligand' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3CDM _pdbx_database_status.recvd_initial_deposition_date 2008-02-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Parkinson, G.N.' 1 ? 'Neidle, S.' 2 ? # _citation.id primary _citation.title ;Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 381 _citation.page_first 1145 _citation.page_last 1156 _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18619463 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2008.06.022 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Parkinson, G.N.' 1 ? primary 'Cuenca, F.' 2 ? primary 'Neidle, S.' 3 ? # _cell.entry_id 3CDM _cell.length_a 39.575 _cell.length_b 43.084 _cell.length_c 56.937 _cell.angle_alpha 90.00 _cell.angle_beta 103.58 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CDM _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DT*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DG)-3') ; 7287.690 2 ? ? ? ? 2 non-polymer syn '2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone' 582.691 6 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 4 ? ? ? ? 4 water nat water 18.015 158 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name TELOMERE # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA) (DG)(DG)(DG) ; _entity_poly.pdbx_seq_one_letter_code_can TAGGGTTAGGGTTAGGGTTAGGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DA n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DT n 1 7 DT n 1 8 DA n 1 9 DG n 1 10 DG n 1 11 DG n 1 12 DT n 1 13 DT n 1 14 DA n 1 15 DG n 1 16 DG n 1 17 DG n 1 18 DT n 1 19 DT n 1 20 DA n 1 21 DG n 1 22 DG n 1 23 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This sequence occurs naturally in humans' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3CDM _struct_ref.pdbx_db_accession 3CDM _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code TAGGGTTAGGGTTAGGGTTAGGG _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CDM A 1 ? 23 ? 3CDM 1 ? 23 ? 1 23 2 1 3CDM B 1 ? 23 ? 3CDM 1 ? 23 ? 1 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 NII non-polymer . '2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone' ? 'C30 H42 N6 O6' 582.691 # _exptl.entry_id 3CDM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.24 _exptl_crystal.density_percent_sol 62.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;333mM ammonium sulfate, 10mM magnesium chloride, 50mM sodium chloride, 50mM potassium chloride, 50mM potassium cacodylate pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 283K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'ammonium sulphate' ? ? ? 1 2 1 'magnesium chloride' ? ? ? 1 3 1 'sodium chloride' ? ? ? 1 4 1 'potassium chloride' ? ? ? 1 5 1 'potassium cacodylate' ? ? ? 1 6 1 HOH ? ? ? 1 7 2 'ammonium sulphate' ? ? ? 1 8 2 'magnesium chloride' ? ? ? 1 9 2 'sodium chloride' ? ? ? 1 10 2 'potassium chloride' ? ? ? 1 11 2 'potassium cacodylate' ? ? ? 1 12 2 HOH ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2007-10-07 _diffrn_detector.details Monochromator # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9785 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9785 # _reflns.entry_id 3CDM _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 28.69 _reflns.number_all 10055 _reflns.number_obs 10055 _reflns.percent_possible_obs 91.0 _reflns.pdbx_Rmerge_I_obs 0.036 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.9 _reflns.B_iso_Wilson_estimate 46 _reflns.pdbx_redundancy 2.86 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 95.9 _reflns_shell.Rmerge_I_obs 0.116 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.4 _reflns_shell.pdbx_redundancy 2.94 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1041 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CDM _refine.ls_number_reflns_obs 9497 _refine.ls_number_reflns_all 9497 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 91.26 _refine.ls_R_factor_obs 0.23409 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23409 _refine.ls_R_factor_R_free 0.29491 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 478 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.886 _refine.B_iso_mean 26.776 _refine.aniso_B[1][1] 0.51 _refine.aniso_B[2][2] -1.42 _refine.aniso_B[3][3] 1.15 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.53 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1KF1' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Overall _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.295 _refine.pdbx_overall_ESU_R_Free 0.246 _refine.overall_SU_ML 0.152 _refine.overall_SU_B 5.422 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3CDM _refine_analyze.Luzzati_coordinate_error_obs 0.267 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 950 _refine_hist.pdbx_number_atoms_ligand 256 _refine_hist.number_atoms_solvent 158 _refine_hist.number_atoms_total 1364 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.021 ? 1340 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.804 3.000 ? 2042 'X-RAY DIFFRACTION' ? r_chiral_restr 0.125 0.200 ? 190 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.016 0.020 ? 649 'X-RAY DIFFRACTION' ? r_nbd_refined 0.342 0.200 ? 510 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.331 0.200 ? 774 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.219 0.200 ? 98 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.107 0.200 ? 13 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.170 0.200 ? 91 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.126 0.200 ? 4 'X-RAY DIFFRACTION' ? r_scbond_it 2.779 3.000 ? 1986 'X-RAY DIFFRACTION' ? r_scangle_it 4.226 4.500 ? 2042 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.152 _refine_ls_shell.number_reflns_R_work 693 _refine_ls_shell.R_factor_R_work 0.317 _refine_ls_shell.percent_reflns_obs 95.80 _refine_ls_shell.R_factor_R_free 0.374 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 37 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 693 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3CDM _struct.title 'Structural adaptation and conservation in quadruplex-drug recognition' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CDM _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'QUADRUPLEX, DNA, PROPELLER, INTRAMOLECULAR, HUMAN TELOMERE PARALLEL STRANDED, LIGAND, COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 4 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 3 O6 ? ? ? 1_555 F K . K ? ? A DG 3 A K 25 1_555 ? ? ? ? ? ? ? 2.833 ? ? metalc2 metalc ? ? A DG 4 O6 ? ? ? 1_555 E K . K ? ? A DG 4 A K 24 1_555 ? ? ? ? ? ? ? 2.920 ? ? metalc3 metalc ? ? A DG 4 O6 ? ? ? 1_555 F K . K ? ? A DG 4 A K 25 1_555 ? ? ? ? ? ? ? 3.000 ? ? metalc4 metalc ? ? A DG 5 O6 ? ? ? 1_555 E K . K ? ? A DG 5 A K 24 1_555 ? ? ? ? ? ? ? 2.709 ? ? metalc5 metalc ? ? A DG 9 O6 ? ? ? 1_555 F K . K ? ? A DG 9 A K 25 1_555 ? ? ? ? ? ? ? 2.754 ? ? metalc6 metalc ? ? A DG 10 O6 ? ? ? 1_555 E K . K ? ? A DG 10 A K 24 1_555 ? ? ? ? ? ? ? 2.934 ? ? metalc7 metalc ? ? A DG 10 O6 ? ? ? 1_555 F K . K ? ? A DG 10 A K 25 1_555 ? ? ? ? ? ? ? 2.959 ? ? metalc8 metalc ? ? A DG 11 O6 ? ? ? 1_555 E K . K ? ? A DG 11 A K 24 1_555 ? ? ? ? ? ? ? 2.762 ? ? metalc9 metalc ? ? A DG 15 O6 ? ? ? 1_555 F K . K ? ? A DG 15 A K 25 1_555 ? ? ? ? ? ? ? 2.740 ? ? metalc10 metalc ? ? A DG 16 O6 ? ? ? 1_555 E K . K ? ? A DG 16 A K 24 1_555 ? ? ? ? ? ? ? 2.894 ? ? metalc11 metalc ? ? A DG 16 O6 ? ? ? 1_555 F K . K ? ? A DG 16 A K 25 1_555 ? ? ? ? ? ? ? 2.985 ? ? metalc12 metalc ? ? A DG 17 O6 ? ? ? 1_555 E K . K ? ? A DG 17 A K 24 1_555 ? ? ? ? ? ? ? 2.702 ? ? metalc13 metalc ? ? A DG 21 O6 ? ? ? 1_555 F K . K ? ? A DG 21 A K 25 1_555 ? ? ? ? ? ? ? 2.731 ? ? metalc14 metalc ? ? A DG 22 O6 ? ? ? 1_555 E K . K ? ? A DG 22 A K 24 1_555 ? ? ? ? ? ? ? 2.968 ? ? metalc15 metalc ? ? A DG 22 O6 ? ? ? 1_555 F K . K ? ? A DG 22 A K 25 1_555 ? ? ? ? ? ? ? 2.989 ? ? metalc16 metalc ? ? A DG 23 O6 ? ? ? 1_555 E K . K ? ? A DG 23 A K 24 1_555 ? ? ? ? ? ? ? 2.667 ? ? metalc17 metalc ? ? B DG 3 O6 ? ? ? 1_555 L K . K ? ? B DG 3 B K 25 1_555 ? ? ? ? ? ? ? 2.790 ? ? metalc18 metalc ? ? B DG 4 O6 ? ? ? 1_555 L K . K ? ? B DG 4 B K 25 1_555 ? ? ? ? ? ? ? 2.866 ? ? metalc19 metalc ? ? B DG 5 O6 ? ? ? 1_555 K K . K ? ? B DG 5 B K 24 1_555 ? ? ? ? ? ? ? 2.648 ? ? metalc20 metalc ? ? B DG 9 O6 ? ? ? 1_555 L K . K ? ? B DG 9 B K 25 1_555 ? ? ? ? ? ? ? 2.675 ? ? metalc21 metalc ? ? B DG 10 O6 ? ? ? 1_555 L K . K ? ? B DG 10 B K 25 1_555 ? ? ? ? ? ? ? 2.917 ? ? metalc22 metalc ? ? B DG 11 O6 ? ? ? 1_555 K K . K ? ? B DG 11 B K 24 1_555 ? ? ? ? ? ? ? 2.565 ? ? metalc23 metalc ? ? B DG 15 O6 ? ? ? 1_555 L K . K ? ? B DG 15 B K 25 1_555 ? ? ? ? ? ? ? 2.886 ? ? metalc24 metalc ? ? B DG 16 O6 ? ? ? 1_555 L K . K ? ? B DG 16 B K 25 1_555 ? ? ? ? ? ? ? 2.950 ? ? metalc25 metalc ? ? B DG 17 O6 ? ? ? 1_555 K K . K ? ? B DG 17 B K 24 1_555 ? ? ? ? ? ? ? 2.697 ? ? metalc26 metalc ? ? B DG 21 O6 ? ? ? 1_555 L K . K ? ? B DG 21 B K 25 1_555 ? ? ? ? ? ? ? 2.888 ? ? metalc27 metalc ? ? B DG 23 O6 ? ? ? 1_555 K K . K ? ? B DG 23 B K 24 1_555 ? ? ? ? ? ? ? 2.658 ? ? hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 13 N3 ? ? A DA 2 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 13 O4 ? ? A DA 2 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 21 N2 ? ? A DG 3 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 21 N1 ? ? A DG 3 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DT 6 O4 ? ? A DG 4 A DT 6 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ? hydrog8 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 4 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 4 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 22 N2 ? ? A DG 4 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 22 N1 ? ? A DG 4 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 11 O6 ? ? A DG 5 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 11 N7 ? ? A DG 5 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 23 N2 ? ? A DG 5 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 23 N1 ? ? A DG 5 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 16 O6 ? ? A DG 10 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 16 N7 ? ? A DG 10 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DG 17 O6 ? ? A DG 11 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DG 17 N7 ? ? A DG 11 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 13 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 13 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 21 O6 ? ? A DG 15 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 21 N7 ? ? A DG 15 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DG 22 O6 ? ? A DG 16 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DG 22 N7 ? ? A DG 16 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 17 N1 ? ? ? 1_555 A DG 23 O6 ? ? A DG 17 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DG 17 N2 ? ? ? 1_555 A DG 23 N7 ? ? A DG 17 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? A DT 19 O2 ? ? ? 1_555 B DA 20 N6 ? ? A DT 19 B DA 20 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog31 hydrog ? ? B DT 1 N3 ? ? ? 1_555 B DA 8 N1 ? ? B DT 1 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DT 1 O4 ? ? ? 1_555 B DA 8 N6 ? ? B DT 1 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 3 N1 ? ? ? 1_555 B DG 9 O6 ? ? B DG 3 B DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? B DG 3 N2 ? ? ? 1_555 B DG 9 N7 ? ? B DG 3 B DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? B DG 3 N7 ? ? ? 1_555 B DG 21 N2 ? ? B DG 3 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? B DG 3 O6 ? ? ? 1_555 B DG 21 N1 ? ? B DG 3 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? B DG 4 N1 ? ? ? 1_555 B DG 10 O6 ? ? B DG 4 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? B DG 4 N2 ? ? ? 1_555 B DG 10 N7 ? ? B DG 4 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog39 hydrog ? ? B DG 4 N7 ? ? ? 1_555 B DG 22 N2 ? ? B DG 4 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog40 hydrog ? ? B DG 4 O6 ? ? ? 1_555 B DG 22 N1 ? ? B DG 4 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog41 hydrog ? ? B DG 5 N1 ? ? ? 1_555 B DG 11 O6 ? ? B DG 5 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog42 hydrog ? ? B DG 5 N2 ? ? ? 1_555 B DG 11 N7 ? ? B DG 5 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog43 hydrog ? ? B DG 5 N7 ? ? ? 1_555 B DG 23 N2 ? ? B DG 5 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog44 hydrog ? ? B DG 5 O6 ? ? ? 1_555 B DG 23 N1 ? ? B DG 5 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog45 hydrog ? ? B DG 9 N1 ? ? ? 1_555 B DG 15 O6 ? ? B DG 9 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog46 hydrog ? ? B DG 9 N2 ? ? ? 1_555 B DG 15 N7 ? ? B DG 9 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog47 hydrog ? ? B DG 10 N1 ? ? ? 1_555 B DG 16 O6 ? ? B DG 10 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog48 hydrog ? ? B DG 10 N2 ? ? ? 1_555 B DG 16 N7 ? ? B DG 10 B DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog49 hydrog ? ? B DG 11 N1 ? ? ? 1_555 B DG 17 O6 ? ? B DG 11 B DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog50 hydrog ? ? B DG 11 N2 ? ? ? 1_555 B DG 17 N7 ? ? B DG 11 B DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog51 hydrog ? ? B DG 15 N1 ? ? ? 1_555 B DG 21 O6 ? ? B DG 15 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog52 hydrog ? ? B DG 15 N2 ? ? ? 1_555 B DG 21 N7 ? ? B DG 15 B DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog53 hydrog ? ? B DG 16 N1 ? ? ? 1_555 B DG 22 O6 ? ? B DG 16 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog54 hydrog ? ? B DG 16 N2 ? ? ? 1_555 B DG 22 N7 ? ? B DG 16 B DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog55 hydrog ? ? B DG 17 N1 ? ? ? 1_555 B DG 23 O6 ? ? B DG 17 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog56 hydrog ? ? B DG 17 N2 ? ? ? 1_555 B DG 23 N7 ? ? B DG 17 B DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 24 ? 9 'BINDING SITE FOR RESIDUE K A 24' AC2 Software A K 25 ? 9 'BINDING SITE FOR RESIDUE K A 25' AC3 Software B K 24 ? 9 'BINDING SITE FOR RESIDUE K B 24' AC4 Software B K 25 ? 9 'BINDING SITE FOR RESIDUE K B 25' AC5 Software A NII 26 ? 8 'BINDING SITE FOR RESIDUE NII A 26' AC6 Software A NII 27 ? 13 'BINDING SITE FOR RESIDUE NII A 27' AC7 Software B NII 26 ? 5 'BINDING SITE FOR RESIDUE NII B 26' AC8 Software B NII 27 ? 6 'BINDING SITE FOR RESIDUE NII B 27' AC9 Software B NII 28 ? 5 'BINDING SITE FOR RESIDUE NII B 28' BC1 Software B NII 29 ? 8 'BINDING SITE FOR RESIDUE NII B 29' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 DG A 4 ? DG A 4 . ? 1_555 ? 2 AC1 9 DG A 5 ? DG A 5 . ? 1_555 ? 3 AC1 9 DG A 10 ? DG A 10 . ? 1_555 ? 4 AC1 9 DG A 11 ? DG A 11 . ? 1_555 ? 5 AC1 9 DG A 16 ? DG A 16 . ? 1_555 ? 6 AC1 9 DG A 17 ? DG A 17 . ? 1_555 ? 7 AC1 9 DG A 22 ? DG A 22 . ? 1_555 ? 8 AC1 9 DG A 23 ? DG A 23 . ? 1_555 ? 9 AC1 9 K F . ? K A 25 . ? 1_555 ? 10 AC2 9 DG A 3 ? DG A 3 . ? 1_555 ? 11 AC2 9 DG A 4 ? DG A 4 . ? 1_555 ? 12 AC2 9 DG A 9 ? DG A 9 . ? 1_555 ? 13 AC2 9 DG A 10 ? DG A 10 . ? 1_555 ? 14 AC2 9 DG A 15 ? DG A 15 . ? 1_555 ? 15 AC2 9 DG A 16 ? DG A 16 . ? 1_555 ? 16 AC2 9 DG A 21 ? DG A 21 . ? 1_555 ? 17 AC2 9 DG A 22 ? DG A 22 . ? 1_555 ? 18 AC2 9 K E . ? K A 24 . ? 1_555 ? 19 AC3 9 DG B 4 ? DG B 4 . ? 1_555 ? 20 AC3 9 DG B 5 ? DG B 5 . ? 1_555 ? 21 AC3 9 DG B 10 ? DG B 10 . ? 1_555 ? 22 AC3 9 DG B 11 ? DG B 11 . ? 1_555 ? 23 AC3 9 DG B 16 ? DG B 16 . ? 1_555 ? 24 AC3 9 DG B 17 ? DG B 17 . ? 1_555 ? 25 AC3 9 DG B 22 ? DG B 22 . ? 1_555 ? 26 AC3 9 DG B 23 ? DG B 23 . ? 1_555 ? 27 AC3 9 K L . ? K B 25 . ? 1_555 ? 28 AC4 9 DG B 3 ? DG B 3 . ? 1_555 ? 29 AC4 9 DG B 4 ? DG B 4 . ? 1_555 ? 30 AC4 9 DG B 9 ? DG B 9 . ? 1_555 ? 31 AC4 9 DG B 10 ? DG B 10 . ? 1_555 ? 32 AC4 9 DG B 15 ? DG B 15 . ? 1_555 ? 33 AC4 9 DG B 16 ? DG B 16 . ? 1_555 ? 34 AC4 9 DG B 21 ? DG B 21 . ? 1_555 ? 35 AC4 9 DG B 22 ? DG B 22 . ? 1_555 ? 36 AC4 9 K K . ? K B 24 . ? 1_555 ? 37 AC5 8 DG A 5 ? DG A 5 . ? 1_555 ? 38 AC5 8 DG A 11 ? DG A 11 . ? 1_555 ? 39 AC5 8 DG A 17 ? DG A 17 . ? 1_555 ? 40 AC5 8 DG A 23 ? DG A 23 . ? 1_555 ? 41 AC5 8 HOH M . ? HOH A 36 . ? 1_555 ? 42 AC5 8 HOH M . ? HOH A 53 . ? 1_555 ? 43 AC5 8 HOH M . ? HOH A 56 . ? 1_555 ? 44 AC5 8 HOH M . ? HOH A 65 . ? 1_555 ? 45 AC6 13 DG A 3 ? DG A 3 . ? 1_555 ? 46 AC6 13 DG A 4 ? DG A 4 . ? 1_555 ? 47 AC6 13 DG A 9 ? DG A 9 . ? 1_555 ? 48 AC6 13 DG A 15 ? DG A 15 . ? 1_555 ? 49 AC6 13 DG A 21 ? DG A 21 . ? 1_555 ? 50 AC6 13 HOH M . ? HOH A 39 . ? 1_555 ? 51 AC6 13 HOH M . ? HOH A 43 . ? 1_555 ? 52 AC6 13 HOH M . ? HOH A 45 . ? 1_555 ? 53 AC6 13 HOH M . ? HOH A 55 . ? 1_555 ? 54 AC6 13 HOH M . ? HOH A 57 . ? 1_555 ? 55 AC6 13 DG B 15 ? DG B 15 . ? 1_555 ? 56 AC6 13 DG B 21 ? DG B 21 . ? 1_555 ? 57 AC6 13 NII H . ? NII B 27 . ? 1_555 ? 58 AC7 5 DG B 5 ? DG B 5 . ? 1_555 ? 59 AC7 5 DG B 11 ? DG B 11 . ? 1_555 ? 60 AC7 5 DG B 17 ? DG B 17 . ? 1_555 ? 61 AC7 5 DG B 23 ? DG B 23 . ? 1_555 ? 62 AC7 5 HOH N . ? HOH B 73 . ? 1_555 ? 63 AC8 6 NII D . ? NII A 27 . ? 1_555 ? 64 AC8 6 DG B 3 ? DG B 3 . ? 1_555 ? 65 AC8 6 DG B 9 ? DG B 9 . ? 1_555 ? 66 AC8 6 DG B 15 ? DG B 15 . ? 1_555 ? 67 AC8 6 DG B 21 ? DG B 21 . ? 1_555 ? 68 AC8 6 HOH N . ? HOH B 60 . ? 1_555 ? 69 AC9 5 DT A 7 ? DT A 7 . ? 1_455 ? 70 AC9 5 DA A 8 ? DA A 8 . ? 1_455 ? 71 AC9 5 DT A 19 ? DT A 19 . ? 1_555 ? 72 AC9 5 DT B 19 ? DT B 19 . ? 1_555 ? 73 AC9 5 DA B 20 ? DA B 20 . ? 1_555 ? 74 BC1 8 DA A 8 ? DA A 8 . ? 1_555 ? 75 BC1 8 DT B 1 ? DT B 1 . ? 1_555 ? 76 BC1 8 DT B 7 ? DT B 7 . ? 1_555 ? 77 BC1 8 DA B 8 ? DA B 8 . ? 1_555 ? 78 BC1 8 DT B 18 ? DT B 18 . ? 1_655 ? 79 BC1 8 DT B 19 ? DT B 19 . ? 1_655 ? 80 BC1 8 HOH N . ? HOH B 47 . ? 1_555 ? 81 BC1 8 HOH N . ? HOH B 71 . ? 1_555 ? # _database_PDB_matrix.entry_id 3CDM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3CDM _atom_sites.fract_transf_matrix[1][1] 0.025268 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006106 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023210 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018069 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 ? ? ? A . n A 1 2 DA 2 2 2 DA A A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DT 6 6 6 DT T A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DA 8 8 8 DA A A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DG 11 11 11 DG G A . n A 1 12 DT 12 12 12 DT T A . n A 1 13 DT 13 13 13 DT T A . n A 1 14 DA 14 14 14 DA A A . n A 1 15 DG 15 15 15 DG G A . n A 1 16 DG 16 16 16 DG G A . n A 1 17 DG 17 17 17 DG G A . n A 1 18 DT 18 18 18 DT T A . n A 1 19 DT 19 19 19 DT T A . n A 1 20 DA 20 20 20 DA A A . n A 1 21 DG 21 21 21 DG G A . n A 1 22 DG 22 22 22 DG G A . n A 1 23 DG 23 23 23 DG G A . n B 1 1 DT 1 1 1 DT T B . n B 1 2 DA 2 2 2 DA A B . n B 1 3 DG 3 3 3 DG G B . n B 1 4 DG 4 4 4 DG G B . n B 1 5 DG 5 5 5 DG G B . n B 1 6 DT 6 6 6 DT T B . n B 1 7 DT 7 7 7 DT T B . n B 1 8 DA 8 8 8 DA A B . n B 1 9 DG 9 9 9 DG G B . n B 1 10 DG 10 10 10 DG G B . n B 1 11 DG 11 11 11 DG G B . n B 1 12 DT 12 12 12 DT T B . n B 1 13 DT 13 13 13 DT T B . n B 1 14 DA 14 14 14 DA A B . n B 1 15 DG 15 15 15 DG G B . n B 1 16 DG 16 16 16 DG G B . n B 1 17 DG 17 17 17 DG G B . n B 1 18 DT 18 18 18 DT T B . n B 1 19 DT 19 19 19 DT T B . n B 1 20 DA 20 20 20 DA A B . n B 1 21 DG 21 21 21 DG G B . n B 1 22 DG 22 22 22 DG G B . n B 1 23 DG 23 23 23 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NII 1 26 1 NII P10 A . D 2 NII 1 27 2 NII P10 A . E 3 K 1 24 1 K K A . F 3 K 1 25 2 K K A . G 2 NII 1 26 3 NII P10 B . H 2 NII 1 27 4 NII P10 B . I 2 NII 1 28 5 NII P10 B . J 2 NII 1 29 6 NII P10 B . K 3 K 1 24 1 K K B . L 3 K 1 25 2 K K B . M 4 HOH 1 28 1 HOH HOH A . M 4 HOH 2 29 3 HOH HOH A . M 4 HOH 3 30 7 HOH HOH A . M 4 HOH 4 31 8 HOH HOH A . M 4 HOH 5 32 9 HOH HOH A . M 4 HOH 6 33 11 HOH HOH A . M 4 HOH 7 34 12 HOH HOH A . M 4 HOH 8 35 14 HOH HOH A . M 4 HOH 9 36 21 HOH HOH A . M 4 HOH 10 37 22 HOH HOH A . M 4 HOH 11 38 25 HOH HOH A . M 4 HOH 12 39 26 HOH HOH A . M 4 HOH 13 40 28 HOH HOH A . M 4 HOH 14 41 30 HOH HOH A . M 4 HOH 15 42 33 HOH HOH A . M 4 HOH 16 43 38 HOH HOH A . M 4 HOH 17 44 39 HOH HOH A . M 4 HOH 18 45 41 HOH HOH A . M 4 HOH 19 46 45 HOH HOH A . M 4 HOH 20 47 48 HOH HOH A . M 4 HOH 21 48 49 HOH HOH A . M 4 HOH 22 49 50 HOH HOH A . M 4 HOH 23 50 51 HOH HOH A . M 4 HOH 24 51 52 HOH HOH A . M 4 HOH 25 52 53 HOH HOH A . M 4 HOH 26 53 55 HOH HOH A . M 4 HOH 27 54 57 HOH HOH A . M 4 HOH 28 55 58 HOH HOH A . M 4 HOH 29 56 59 HOH HOH A . M 4 HOH 30 57 60 HOH HOH A . M 4 HOH 31 58 61 HOH HOH A . M 4 HOH 32 59 73 HOH HOH A . M 4 HOH 33 60 74 HOH HOH A . M 4 HOH 34 61 75 HOH HOH A . M 4 HOH 35 62 76 HOH HOH A . M 4 HOH 36 63 79 HOH HOH A . M 4 HOH 37 64 80 HOH HOH A . M 4 HOH 38 65 81 HOH HOH A . M 4 HOH 39 66 82 HOH HOH A . M 4 HOH 40 67 83 HOH HOH A . M 4 HOH 41 68 84 HOH HOH A . M 4 HOH 42 69 85 HOH HOH A . M 4 HOH 43 70 87 HOH HOH A . M 4 HOH 44 71 90 HOH HOH A . M 4 HOH 45 72 94 HOH HOH A . M 4 HOH 46 73 95 HOH HOH A . M 4 HOH 47 74 96 HOH HOH A . M 4 HOH 48 75 97 HOH HOH A . M 4 HOH 49 76 99 HOH HOH A . M 4 HOH 50 77 100 HOH HOH A . M 4 HOH 51 78 101 HOH HOH A . M 4 HOH 52 79 103 HOH HOH A . M 4 HOH 53 80 105 HOH HOH A . M 4 HOH 54 81 109 HOH HOH A . M 4 HOH 55 82 110 HOH HOH A . M 4 HOH 56 83 117 HOH HOH A . M 4 HOH 57 84 119 HOH HOH A . M 4 HOH 58 85 121 HOH HOH A . M 4 HOH 59 86 122 HOH HOH A . M 4 HOH 60 87 123 HOH HOH A . M 4 HOH 61 88 125 HOH HOH A . M 4 HOH 62 89 127 HOH HOH A . M 4 HOH 63 90 128 HOH HOH A . M 4 HOH 64 91 129 HOH HOH A . M 4 HOH 65 92 130 HOH HOH A . M 4 HOH 66 93 132 HOH HOH A . M 4 HOH 67 94 133 HOH HOH A . M 4 HOH 68 95 136 HOH HOH A . M 4 HOH 69 96 137 HOH HOH A . M 4 HOH 70 97 138 HOH HOH A . M 4 HOH 71 98 141 HOH HOH A . M 4 HOH 72 99 142 HOH HOH A . M 4 HOH 73 100 143 HOH HOH A . M 4 HOH 74 101 144 HOH HOH A . M 4 HOH 75 102 146 HOH HOH A . M 4 HOH 76 103 150 HOH HOH A . M 4 HOH 77 104 151 HOH HOH A . M 4 HOH 78 105 155 HOH HOH A . M 4 HOH 79 106 156 HOH HOH A . M 4 HOH 80 107 157 HOH HOH A . M 4 HOH 81 108 44 HOH HOH A . N 4 HOH 1 30 2 HOH HOH B . N 4 HOH 2 31 4 HOH HOH B . N 4 HOH 3 32 5 HOH HOH B . N 4 HOH 4 33 6 HOH HOH B . N 4 HOH 5 34 10 HOH HOH B . N 4 HOH 6 35 13 HOH HOH B . N 4 HOH 7 36 15 HOH HOH B . N 4 HOH 8 37 16 HOH HOH B . N 4 HOH 9 38 17 HOH HOH B . N 4 HOH 10 39 18 HOH HOH B . N 4 HOH 11 40 19 HOH HOH B . N 4 HOH 12 41 20 HOH HOH B . N 4 HOH 13 42 23 HOH HOH B . N 4 HOH 14 43 24 HOH HOH B . N 4 HOH 15 44 27 HOH HOH B . N 4 HOH 16 45 29 HOH HOH B . N 4 HOH 17 46 31 HOH HOH B . N 4 HOH 18 47 32 HOH HOH B . N 4 HOH 19 48 34 HOH HOH B . N 4 HOH 20 49 35 HOH HOH B . N 4 HOH 21 50 36 HOH HOH B . N 4 HOH 22 51 37 HOH HOH B . N 4 HOH 23 52 40 HOH HOH B . N 4 HOH 24 53 42 HOH HOH B . N 4 HOH 25 54 43 HOH HOH B . N 4 HOH 26 56 46 HOH HOH B . N 4 HOH 27 57 47 HOH HOH B . N 4 HOH 28 58 54 HOH HOH B . N 4 HOH 29 59 56 HOH HOH B . N 4 HOH 30 60 62 HOH HOH B . N 4 HOH 31 61 63 HOH HOH B . N 4 HOH 32 62 64 HOH HOH B . N 4 HOH 33 63 65 HOH HOH B . N 4 HOH 34 64 66 HOH HOH B . N 4 HOH 35 65 67 HOH HOH B . N 4 HOH 36 66 68 HOH HOH B . N 4 HOH 37 67 69 HOH HOH B . N 4 HOH 38 68 70 HOH HOH B . N 4 HOH 39 69 71 HOH HOH B . N 4 HOH 40 70 72 HOH HOH B . N 4 HOH 41 71 77 HOH HOH B . N 4 HOH 42 72 78 HOH HOH B . N 4 HOH 43 73 86 HOH HOH B . N 4 HOH 44 74 88 HOH HOH B . N 4 HOH 45 75 89 HOH HOH B . N 4 HOH 46 76 91 HOH HOH B . N 4 HOH 47 77 92 HOH HOH B . N 4 HOH 48 78 93 HOH HOH B . N 4 HOH 49 79 98 HOH HOH B . N 4 HOH 50 80 102 HOH HOH B . N 4 HOH 51 81 104 HOH HOH B . N 4 HOH 52 82 106 HOH HOH B . N 4 HOH 53 83 107 HOH HOH B . N 4 HOH 54 84 108 HOH HOH B . N 4 HOH 55 85 111 HOH HOH B . N 4 HOH 56 86 112 HOH HOH B . N 4 HOH 57 87 113 HOH HOH B . N 4 HOH 58 88 114 HOH HOH B . N 4 HOH 59 89 115 HOH HOH B . N 4 HOH 60 90 116 HOH HOH B . N 4 HOH 61 91 118 HOH HOH B . N 4 HOH 62 92 120 HOH HOH B . N 4 HOH 63 93 124 HOH HOH B . N 4 HOH 64 94 126 HOH HOH B . N 4 HOH 65 95 131 HOH HOH B . N 4 HOH 66 96 134 HOH HOH B . N 4 HOH 67 97 135 HOH HOH B . N 4 HOH 68 98 139 HOH HOH B . N 4 HOH 69 99 140 HOH HOH B . N 4 HOH 70 100 145 HOH HOH B . N 4 HOH 71 101 147 HOH HOH B . N 4 HOH 72 102 148 HOH HOH B . N 4 HOH 73 103 149 HOH HOH B . N 4 HOH 74 104 152 HOH HOH B . N 4 HOH 75 105 153 HOH HOH B . N 4 HOH 76 106 154 HOH HOH B . N 4 HOH 77 107 158 HOH HOH B . # _struct_site_keywords.site_id 1 _struct_site_keywords.text INTERCALATION # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,M 2 1 B,G,H,I,J,K,L,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 76.2 ? 2 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 73.5 ? 3 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 85.9 ? 4 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 135.4 ? 5 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 69.5 ? 6 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 76.4 ? 7 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 119.5 ? 8 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 152.4 ? 9 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 78.2 ? 10 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 84.9 ? 11 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 151.4 ? 12 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 102.1 ? 13 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 135.1 ? 14 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 65.9 ? 15 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 75.1 ? 16 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 73.4 ? 17 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 130.2 ? 18 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 120.7 ? 19 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 151.2 ? 20 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 77.3 ? 21 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 87.5 ? 22 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 85.8 ? 23 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 65.3 ? 24 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 148.0 ? 25 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 104.0 ? 26 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 133.7 ? 27 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 68.2 ? 28 O6 ? A DG 21 ? A DG 21 ? 1_555 K ? F K . ? A K 25 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 74.0 ? 29 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 69.5 ? 30 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 70.9 ? 31 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 92.1 ? 32 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 126.2 ? 33 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 74.5 ? 34 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 71.9 ? 35 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 106.3 ? 36 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 158.9 ? 37 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 67.4 ? 38 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 93.4 ? 39 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 157.1 ? 40 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 124.4 ? 41 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 122.0 ? 42 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 76.7 ? 43 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 67.3 ? 44 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 66.5 ? 45 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 123.3 ? 46 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 105.2 ? 47 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 162.1 ? 48 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 69.7 ? 49 O6 ? A DG 17 ? A DG 17 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 90.9 ? 50 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 90.2 ? 51 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 73.6 ? 52 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 159.6 ? 53 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 116.4 ? 54 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 127.5 ? 55 O6 ? A DG 17 ? A DG 17 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 78.3 ? 56 O6 ? A DG 22 ? A DG 22 ? 1_555 K ? E K . ? A K 24 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 72.6 ? 57 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 4 ? B DG 4 ? 1_555 75.6 ? 58 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 79.4 ? 59 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 9 ? B DG 9 ? 1_555 91.3 ? 60 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 136.3 ? 61 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 70.6 ? 62 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 10 ? B DG 10 ? 1_555 74.7 ? 63 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 116.4 ? 64 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 157.5 ? 65 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 73.6 ? 66 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 15 ? B DG 15 ? 1_555 89.1 ? 67 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 150.5 ? 68 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 107.3 ? 69 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 129.0 ? 70 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 68.3 ? 71 O6 ? B DG 15 ? B DG 15 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 16 ? B DG 16 ? 1_555 72.1 ? 72 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 21 ? B DG 21 ? 1_555 69.3 ? 73 O6 ? B DG 4 ? B DG 4 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 21 ? B DG 21 ? 1_555 128.3 ? 74 O6 ? B DG 9 ? B DG 9 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 21 ? B DG 21 ? 1_555 117.0 ? 75 O6 ? B DG 10 ? B DG 10 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 21 ? B DG 21 ? 1_555 154.4 ? 76 O6 ? B DG 15 ? B DG 15 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 21 ? B DG 21 ? 1_555 74.0 ? 77 O6 ? B DG 16 ? B DG 16 ? 1_555 K ? L K . ? B K 25 ? 1_555 O6 ? B DG 21 ? B DG 21 ? 1_555 87.9 ? 78 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? K K . ? B K 24 ? 1_555 O6 ? B DG 11 ? B DG 11 ? 1_555 76.9 ? 79 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? K K . ? B K 24 ? 1_555 O6 ? B DG 17 ? B DG 17 ? 1_555 124.7 ? 80 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? K K . ? B K 24 ? 1_555 O6 ? B DG 17 ? B DG 17 ? 1_555 77.6 ? 81 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? K K . ? B K 24 ? 1_555 O6 ? B DG 23 ? B DG 23 ? 1_555 80.4 ? 82 O6 ? B DG 11 ? B DG 11 ? 1_555 K ? K K . ? B K 24 ? 1_555 O6 ? B DG 23 ? B DG 23 ? 1_555 125.0 ? 83 O6 ? B DG 17 ? B DG 17 ? 1_555 K ? K K . ? B K 24 ? 1_555 O6 ? B DG 23 ? B DG 23 ? 1_555 75.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_dist_value' 4 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 5 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 ADSC 'data collection' Quantum ? 2 d*TREK 'data reduction' . ? 3 d*TREK 'data scaling' . ? 4 PHASER phasing . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 36 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 56 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C6 A DG 10 ? ? N1 A DG 10 ? ? 1.332 1.391 -0.059 0.007 N 2 1 C6 A DG 10 ? ? O6 A DG 10 ? ? 1.167 1.237 -0.070 0.009 N 3 1 C5 A DG 23 ? ? N7 A DG 23 ? ? 1.432 1.388 0.044 0.006 N 4 1 "O3'" B DA 8 ? ? "C3'" B DA 8 ? ? 1.532 1.435 0.097 0.013 N 5 1 C6 B DG 10 ? ? N1 B DG 10 ? ? 1.452 1.391 0.061 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DA 2 ? ? "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? 100.10 104.50 -4.40 0.40 N 2 1 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 110.37 108.30 2.07 0.30 N 3 1 "O5'" A DG 3 ? ? "C5'" A DG 3 ? ? "C4'" A DG 3 ? ? 99.15 109.40 -10.25 0.80 N 4 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 103.75 108.00 -4.25 0.70 N 5 1 N3 A DG 3 ? ? C2 A DG 3 ? ? N2 A DG 3 ? ? 115.36 119.90 -4.54 0.70 N 6 1 C4 A DG 4 ? ? C5 A DG 4 ? ? C6 A DG 4 ? ? 114.43 118.80 -4.37 0.60 N 7 1 C5 A DG 4 ? ? C6 A DG 4 ? ? N1 A DG 4 ? ? 115.30 111.50 3.80 0.50 N 8 1 N9 A DG 4 ? ? C4 A DG 4 ? ? C5 A DG 4 ? ? 102.74 105.40 -2.66 0.40 N 9 1 N1 A DG 4 ? ? C6 A DG 4 ? ? O6 A DG 4 ? ? 115.96 119.90 -3.94 0.60 N 10 1 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 113.20 108.30 4.90 0.30 N 11 1 C4 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 123.09 119.00 4.09 0.60 N 12 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.20 108.30 2.90 0.30 N 13 1 C2 A DG 9 ? ? N3 A DG 9 ? ? C4 A DG 9 ? ? 115.47 111.90 3.57 0.50 N 14 1 N3 A DG 9 ? ? C4 A DG 9 ? ? C5 A DG 9 ? ? 125.18 128.60 -3.42 0.50 N 15 1 N1 A DG 9 ? ? C2 A DG 9 ? ? N2 A DG 9 ? ? 122.44 116.20 6.24 0.90 N 16 1 N3 A DG 9 ? ? C2 A DG 9 ? ? N2 A DG 9 ? ? 114.29 119.90 -5.61 0.70 N 17 1 N1 A DG 9 ? ? C6 A DG 9 ? ? O6 A DG 9 ? ? 126.52 119.90 6.62 0.60 N 18 1 C5 A DG 9 ? ? C6 A DG 9 ? ? O6 A DG 9 ? ? 119.98 128.60 -8.62 0.60 N 19 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 103.71 108.00 -4.29 0.70 N 20 1 C5 A DG 10 ? ? C6 A DG 10 ? ? N1 A DG 10 ? ? 114.59 111.50 3.09 0.50 N 21 1 C5 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 124.30 128.60 -4.30 0.60 N 22 1 C5 A DG 11 ? ? C6 A DG 11 ? ? O6 A DG 11 ? ? 124.40 128.60 -4.20 0.60 N 23 1 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.19 108.30 1.89 0.30 N 24 1 N1 A DT 12 ? ? C2 A DT 12 ? ? O2 A DT 12 ? ? 118.08 123.10 -5.02 0.80 N 25 1 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 117.18 122.90 -5.72 0.60 N 26 1 C4 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 124.19 119.00 5.19 0.60 N 27 1 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 117.90 122.90 -5.00 0.60 N 28 1 N1 A DA 14 ? ? C2 A DA 14 ? ? N3 A DA 14 ? ? 124.86 129.30 -4.44 0.50 N 29 1 C4 A DA 14 ? ? C5 A DA 14 ? ? C6 A DA 14 ? ? 113.79 117.00 -3.21 0.50 N 30 1 C8 A DA 14 ? ? N9 A DA 14 ? ? C4 A DA 14 ? ? 108.22 105.80 2.42 0.40 N 31 1 "O5'" A DG 15 ? ? "C5'" A DG 15 ? ? "C4'" A DG 15 ? ? 101.25 109.40 -8.15 0.80 N 32 1 C4 A DG 15 ? ? C5 A DG 15 ? ? N7 A DG 15 ? ? 114.16 110.80 3.36 0.40 N 33 1 N9 A DG 15 ? ? C4 A DG 15 ? ? C5 A DG 15 ? ? 102.86 105.40 -2.54 0.40 N 34 1 N3 A DT 18 ? ? C2 A DT 18 ? ? O2 A DT 18 ? ? 118.68 122.30 -3.62 0.60 N 35 1 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 113.03 108.30 4.73 0.30 N 36 1 "O4'" A DG 21 ? ? "C4'" A DG 21 ? ? "C3'" A DG 21 ? ? 109.94 106.00 3.94 0.60 N 37 1 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.62 108.30 3.32 0.30 N 38 1 C5 A DG 21 ? ? C6 A DG 21 ? ? O6 A DG 21 ? ? 122.63 128.60 -5.97 0.60 N 39 1 "C3'" A DG 21 ? ? "O3'" A DG 21 ? ? P A DG 22 ? ? 127.82 119.70 8.12 1.20 Y 40 1 C2 A DG 22 ? ? N3 A DG 22 ? ? C4 A DG 22 ? ? 116.42 111.90 4.52 0.50 N 41 1 C5 A DG 22 ? ? C6 A DG 22 ? ? N1 A DG 22 ? ? 117.41 111.50 5.91 0.50 N 42 1 C4 A DG 22 ? ? C5 A DG 22 ? ? N7 A DG 22 ? ? 113.28 110.80 2.48 0.40 N 43 1 C5 A DG 22 ? ? C6 A DG 22 ? ? O6 A DG 22 ? ? 122.84 128.60 -5.76 0.60 N 44 1 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 111.69 108.30 3.39 0.30 N 45 1 C5 A DG 23 ? ? C6 A DG 23 ? ? N1 A DG 23 ? ? 114.51 111.50 3.01 0.50 N 46 1 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 118.97 122.90 -3.93 0.60 N 47 1 N1 B DA 2 ? ? C6 B DA 2 ? ? N6 B DA 2 ? ? 114.78 118.60 -3.82 0.60 N 48 1 "O5'" B DG 3 ? ? "C5'" B DG 3 ? ? "C4'" B DG 3 ? ? 102.38 109.40 -7.02 0.80 N 49 1 "C3'" B DG 3 ? ? "O3'" B DG 3 ? ? P B DG 4 ? ? 127.46 119.70 7.76 1.20 Y 50 1 C6 B DG 4 ? ? N1 B DG 4 ? ? C2 B DG 4 ? ? 119.26 125.10 -5.84 0.60 N 51 1 C5 B DG 4 ? ? C6 B DG 4 ? ? N1 B DG 4 ? ? 117.21 111.50 5.71 0.50 N 52 1 N3 B DG 4 ? ? C2 B DG 4 ? ? N2 B DG 4 ? ? 115.10 119.90 -4.80 0.70 N 53 1 C5 B DG 4 ? ? C6 B DG 4 ? ? O6 B DG 4 ? ? 122.12 128.60 -6.48 0.60 N 54 1 C8 B DG 5 ? ? N9 B DG 5 ? ? C4 B DG 5 ? ? 109.47 106.40 3.07 0.40 N 55 1 N9 B DG 5 ? ? C4 B DG 5 ? ? C5 B DG 5 ? ? 102.80 105.40 -2.60 0.40 N 56 1 N1 B DG 5 ? ? C6 B DG 5 ? ? O6 B DG 5 ? ? 124.43 119.90 4.53 0.60 N 57 1 C5 B DG 5 ? ? C6 B DG 5 ? ? O6 B DG 5 ? ? 122.12 128.60 -6.48 0.60 N 58 1 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 101.61 108.00 -6.39 0.70 N 59 1 C8 B DG 10 ? ? N9 B DG 10 ? ? C4 B DG 10 ? ? 108.83 106.40 2.43 0.40 N 60 1 N9 B DG 10 ? ? C4 B DG 10 ? ? C5 B DG 10 ? ? 102.38 105.40 -3.02 0.40 N 61 1 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 111.52 108.30 3.22 0.30 N 62 1 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 112.16 108.30 3.86 0.30 N 63 1 N3 B DT 12 ? ? C4 B DT 12 ? ? O4 B DT 12 ? ? 124.23 119.90 4.33 0.60 N 64 1 C5 B DT 12 ? ? C4 B DT 12 ? ? O4 B DT 12 ? ? 119.41 124.90 -5.49 0.70 N 65 1 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 111.61 108.30 3.31 0.30 N 66 1 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 102.42 108.00 -5.58 0.70 N 67 1 C6 B DG 15 ? ? N1 B DG 15 ? ? C2 B DG 15 ? ? 119.58 125.10 -5.52 0.60 N 68 1 C5 B DG 15 ? ? C6 B DG 15 ? ? N1 B DG 15 ? ? 115.04 111.50 3.54 0.50 N 69 1 N3 B DG 15 ? ? C2 B DG 15 ? ? N2 B DG 15 ? ? 112.28 119.90 -7.62 0.70 N 70 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 103.72 108.00 -4.28 0.70 N 71 1 C6 B DG 16 ? ? N1 B DG 16 ? ? C2 B DG 16 ? ? 121.28 125.10 -3.82 0.60 N 72 1 C5 B DG 16 ? ? C6 B DG 16 ? ? N1 B DG 16 ? ? 114.87 111.50 3.37 0.50 N 73 1 C4 B DG 16 ? ? C5 B DG 16 ? ? N7 B DG 16 ? ? 113.29 110.80 2.49 0.40 N 74 1 N3 B DG 16 ? ? C2 B DG 16 ? ? N2 B DG 16 ? ? 115.58 119.90 -4.32 0.70 N 75 1 N1 B DG 16 ? ? C6 B DG 16 ? ? O6 B DG 16 ? ? 124.80 119.90 4.90 0.60 N 76 1 C5 B DG 16 ? ? C6 B DG 16 ? ? O6 B DG 16 ? ? 120.30 128.60 -8.30 0.60 N 77 1 C6 B DG 17 ? ? N1 B DG 17 ? ? C2 B DG 17 ? ? 120.69 125.10 -4.41 0.60 N 78 1 N3 B DG 17 ? ? C4 B DG 17 ? ? C5 B DG 17 ? ? 125.07 128.60 -3.53 0.50 N 79 1 C5 B DG 17 ? ? C6 B DG 17 ? ? N1 B DG 17 ? ? 115.54 111.50 4.04 0.50 N 80 1 N3 B DG 17 ? ? C2 B DG 17 ? ? N2 B DG 17 ? ? 113.86 119.90 -6.04 0.70 N 81 1 C5 B DG 17 ? ? C6 B DG 17 ? ? O6 B DG 17 ? ? 123.40 128.60 -5.20 0.60 N 82 1 N3 B DT 18 ? ? C2 B DT 18 ? ? O2 B DT 18 ? ? 116.19 122.30 -6.11 0.60 N 83 1 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.36 122.90 -4.54 0.60 N 84 1 C6 B DT 19 ? ? C5 B DT 19 ? ? C7 B DT 19 ? ? 116.58 122.90 -6.32 0.60 N 85 1 "C3'" B DA 20 ? ? "C2'" B DA 20 ? ? "C1'" B DA 20 ? ? 97.23 102.40 -5.17 0.80 N 86 1 "O4'" B DA 20 ? ? "C1'" B DA 20 ? ? N9 B DA 20 ? ? 112.39 108.30 4.09 0.30 N 87 1 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9 B DG 21 ? ? 110.42 108.30 2.12 0.30 N 88 1 C6 B DG 21 ? ? N1 B DG 21 ? ? C2 B DG 21 ? ? 121.31 125.10 -3.79 0.60 N 89 1 C5 B DG 21 ? ? C6 B DG 21 ? ? N1 B DG 21 ? ? 116.38 111.50 4.88 0.50 N 90 1 N1 B DG 21 ? ? C6 B DG 21 ? ? O6 B DG 21 ? ? 124.10 119.90 4.20 0.60 N 91 1 C5 B DG 21 ? ? C6 B DG 21 ? ? O6 B DG 21 ? ? 119.48 128.60 -9.12 0.60 N 92 1 "C3'" B DG 22 ? ? "C2'" B DG 22 ? ? "C1'" B DG 22 ? ? 97.04 102.40 -5.36 0.80 N 93 1 C5 B DG 22 ? ? C6 B DG 22 ? ? O6 B DG 22 ? ? 123.20 128.60 -5.40 0.60 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DA 2 ? P ? A DA 2 P 2 1 Y 1 A DA 2 ? OP1 ? A DA 2 OP1 3 1 Y 1 A DA 2 ? OP2 ? A DA 2 OP2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id DT _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id DT _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DG OP3 O N N 37 DG P P N N 38 DG OP1 O N N 39 DG OP2 O N N 40 DG "O5'" O N N 41 DG "C5'" C N N 42 DG "C4'" C N R 43 DG "O4'" O N N 44 DG "C3'" C N S 45 DG "O3'" O N N 46 DG "C2'" C N N 47 DG "C1'" C N R 48 DG N9 N Y N 49 DG C8 C Y N 50 DG N7 N Y N 51 DG C5 C Y N 52 DG C6 C N N 53 DG O6 O N N 54 DG N1 N N N 55 DG C2 C N N 56 DG N2 N N N 57 DG N3 N N N 58 DG C4 C Y N 59 DG HOP3 H N N 60 DG HOP2 H N N 61 DG "H5'" H N N 62 DG "H5''" H N N 63 DG "H4'" H N N 64 DG "H3'" H N N 65 DG "HO3'" H N N 66 DG "H2'" H N N 67 DG "H2''" H N N 68 DG "H1'" H N N 69 DG H8 H N N 70 DG H1 H N N 71 DG H21 H N N 72 DG H22 H N N 73 DT OP3 O N N 74 DT P P N N 75 DT OP1 O N N 76 DT OP2 O N N 77 DT "O5'" O N N 78 DT "C5'" C N N 79 DT "C4'" C N R 80 DT "O4'" O N N 81 DT "C3'" C N S 82 DT "O3'" O N N 83 DT "C2'" C N N 84 DT "C1'" C N R 85 DT N1 N N N 86 DT C2 C N N 87 DT O2 O N N 88 DT N3 N N N 89 DT C4 C N N 90 DT O4 O N N 91 DT C5 C N N 92 DT C7 C N N 93 DT C6 C N N 94 DT HOP3 H N N 95 DT HOP2 H N N 96 DT "H5'" H N N 97 DT "H5''" H N N 98 DT "H4'" H N N 99 DT "H3'" H N N 100 DT "HO3'" H N N 101 DT "H2'" H N N 102 DT "H2''" H N N 103 DT "H1'" H N N 104 DT H3 H N N 105 DT H71 H N N 106 DT H72 H N N 107 DT H73 H N N 108 DT H6 H N N 109 HOH O O N N 110 HOH H1 H N N 111 HOH H2 H N N 112 K K K N N 113 NII O6 O N N 114 NII C30 C N N 115 NII C29 C N N 116 NII C28 C N N 117 NII N3 N N N 118 NII C9 C Y N 119 NII C8 C Y N 120 NII C7 C Y N 121 NII C14 C N N 122 NII O1 O N N 123 NII N2 N N N 124 NII C18 C N N 125 NII C19 C N N 126 NII C20 C N N 127 NII N5 N N N 128 NII C24 C N N 129 NII C23 C N N 130 NII C13 C N N 131 NII O4 O N N 132 NII C10 C Y N 133 NII C11 C N N 134 NII O2 O N N 135 NII N1 N N N 136 NII C15 C N N 137 NII C16 C N N 138 NII C17 C N N 139 NII N4 N N N 140 NII C21 C N N 141 NII C22 C N N 142 NII C5 C Y N 143 NII C6 C Y N 144 NII C12 C N N 145 NII O3 O N N 146 NII C4 C Y N 147 NII C3 C Y N 148 NII C2 C Y N 149 NII C1 C Y N 150 NII N6 N N N 151 NII C25 C N N 152 NII C26 C N N 153 NII C27 C N N 154 NII O5 O N N 155 NII HO6 H N N 156 NII H30 H N N 157 NII H30A H N N 158 NII H29 H N N 159 NII H29A H N N 160 NII H28 H N N 161 NII H28A H N N 162 NII HN3 H N N 163 NII H8 H N N 164 NII H18 H N N 165 NII H18A H N N 166 NII H19 H N N 167 NII H19A H N N 168 NII H20 H N N 169 NII H20A H N N 170 NII H24 H N N 171 NII H24A H N N 172 NII H24B H N N 173 NII H23 H N N 174 NII H23A H N N 175 NII H23B H N N 176 NII H15 H N N 177 NII H15A H N N 178 NII H16 H N N 179 NII H16A H N N 180 NII H17 H N N 181 NII H17A H N N 182 NII H21 H N N 183 NII H21A H N N 184 NII H21B H N N 185 NII H22 H N N 186 NII H22A H N N 187 NII H22B H N N 188 NII H1 H N N 189 NII HN6 H N N 190 NII H25 H N N 191 NII H25A H N N 192 NII H26 H N N 193 NII H26A H N N 194 NII H27 H N N 195 NII H27A H N N 196 NII HO5 H N N 197 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DG OP3 P sing N N 39 DG OP3 HOP3 sing N N 40 DG P OP1 doub N N 41 DG P OP2 sing N N 42 DG P "O5'" sing N N 43 DG OP2 HOP2 sing N N 44 DG "O5'" "C5'" sing N N 45 DG "C5'" "C4'" sing N N 46 DG "C5'" "H5'" sing N N 47 DG "C5'" "H5''" sing N N 48 DG "C4'" "O4'" sing N N 49 DG "C4'" "C3'" sing N N 50 DG "C4'" "H4'" sing N N 51 DG "O4'" "C1'" sing N N 52 DG "C3'" "O3'" sing N N 53 DG "C3'" "C2'" sing N N 54 DG "C3'" "H3'" sing N N 55 DG "O3'" "HO3'" sing N N 56 DG "C2'" "C1'" sing N N 57 DG "C2'" "H2'" sing N N 58 DG "C2'" "H2''" sing N N 59 DG "C1'" N9 sing N N 60 DG "C1'" "H1'" sing N N 61 DG N9 C8 sing Y N 62 DG N9 C4 sing Y N 63 DG C8 N7 doub Y N 64 DG C8 H8 sing N N 65 DG N7 C5 sing Y N 66 DG C5 C6 sing N N 67 DG C5 C4 doub Y N 68 DG C6 O6 doub N N 69 DG C6 N1 sing N N 70 DG N1 C2 sing N N 71 DG N1 H1 sing N N 72 DG C2 N2 sing N N 73 DG C2 N3 doub N N 74 DG N2 H21 sing N N 75 DG N2 H22 sing N N 76 DG N3 C4 sing N N 77 DT OP3 P sing N N 78 DT OP3 HOP3 sing N N 79 DT P OP1 doub N N 80 DT P OP2 sing N N 81 DT P "O5'" sing N N 82 DT OP2 HOP2 sing N N 83 DT "O5'" "C5'" sing N N 84 DT "C5'" "C4'" sing N N 85 DT "C5'" "H5'" sing N N 86 DT "C5'" "H5''" sing N N 87 DT "C4'" "O4'" sing N N 88 DT "C4'" "C3'" sing N N 89 DT "C4'" "H4'" sing N N 90 DT "O4'" "C1'" sing N N 91 DT "C3'" "O3'" sing N N 92 DT "C3'" "C2'" sing N N 93 DT "C3'" "H3'" sing N N 94 DT "O3'" "HO3'" sing N N 95 DT "C2'" "C1'" sing N N 96 DT "C2'" "H2'" sing N N 97 DT "C2'" "H2''" sing N N 98 DT "C1'" N1 sing N N 99 DT "C1'" "H1'" sing N N 100 DT N1 C2 sing N N 101 DT N1 C6 sing N N 102 DT C2 O2 doub N N 103 DT C2 N3 sing N N 104 DT N3 C4 sing N N 105 DT N3 H3 sing N N 106 DT C4 O4 doub N N 107 DT C4 C5 sing N N 108 DT C5 C7 sing N N 109 DT C5 C6 doub N N 110 DT C7 H71 sing N N 111 DT C7 H72 sing N N 112 DT C7 H73 sing N N 113 DT C6 H6 sing N N 114 HOH O H1 sing N N 115 HOH O H2 sing N N 116 NII O6 C30 sing N N 117 NII C30 C29 sing N N 118 NII C29 C28 sing N N 119 NII C28 N3 sing N N 120 NII N3 C9 sing N N 121 NII C9 C8 sing Y N 122 NII C9 C10 doub Y N 123 NII C8 C7 doub Y N 124 NII C7 C14 sing N N 125 NII C7 C4 sing Y N 126 NII C14 O1 doub N N 127 NII C14 N2 sing N N 128 NII N2 C18 sing N N 129 NII N2 C13 sing N N 130 NII C18 C19 sing N N 131 NII C19 C20 sing N N 132 NII C20 N5 sing N N 133 NII N5 C24 sing N N 134 NII N5 C23 sing N N 135 NII C13 O4 doub N N 136 NII C13 C3 sing N N 137 NII C10 C11 sing N N 138 NII C10 C5 sing Y N 139 NII C11 O2 doub N N 140 NII C11 N1 sing N N 141 NII N1 C15 sing N N 142 NII N1 C12 sing N N 143 NII C15 C16 sing N N 144 NII C16 C17 sing N N 145 NII C17 N4 sing N N 146 NII N4 C21 sing N N 147 NII N4 C22 sing N N 148 NII C5 C6 doub Y N 149 NII C5 C4 sing Y N 150 NII C6 C12 sing N N 151 NII C6 C1 sing Y N 152 NII C12 O3 doub N N 153 NII C4 C3 doub Y N 154 NII C3 C2 sing Y N 155 NII C2 C1 doub Y N 156 NII C2 N6 sing N N 157 NII N6 C25 sing N N 158 NII C25 C26 sing N N 159 NII C26 C27 sing N N 160 NII C27 O5 sing N N 161 NII O6 HO6 sing N N 162 NII C30 H30 sing N N 163 NII C30 H30A sing N N 164 NII C29 H29 sing N N 165 NII C29 H29A sing N N 166 NII C28 H28 sing N N 167 NII C28 H28A sing N N 168 NII N3 HN3 sing N N 169 NII C8 H8 sing N N 170 NII C18 H18 sing N N 171 NII C18 H18A sing N N 172 NII C19 H19 sing N N 173 NII C19 H19A sing N N 174 NII C20 H20 sing N N 175 NII C20 H20A sing N N 176 NII C24 H24 sing N N 177 NII C24 H24A sing N N 178 NII C24 H24B sing N N 179 NII C23 H23 sing N N 180 NII C23 H23A sing N N 181 NII C23 H23B sing N N 182 NII C15 H15 sing N N 183 NII C15 H15A sing N N 184 NII C16 H16 sing N N 185 NII C16 H16A sing N N 186 NII C17 H17 sing N N 187 NII C17 H17A sing N N 188 NII C21 H21 sing N N 189 NII C21 H21A sing N N 190 NII C21 H21B sing N N 191 NII C22 H22 sing N N 192 NII C22 H22A sing N N 193 NII C22 H22B sing N N 194 NII C1 H1 sing N N 195 NII N6 HN6 sing N N 196 NII C25 H25 sing N N 197 NII C25 H25A sing N N 198 NII C26 H26 sing N N 199 NII C26 H26A sing N N 200 NII C27 H27 sing N N 201 NII C27 H27A sing N N 202 NII O5 HO5 sing N N 203 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3CDM 'double helix' 3CDM 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 13 1_555 -0.062 -0.040 -0.457 -34.497 -15.662 4.748 1 A_DA2:DT13_B A 2 ? B 13 ? 20 1 1 A DG 9 1_555 A DG 15 1_555 1.666 3.277 -0.010 0.597 -3.321 -92.203 2 A_DG9:DG15_A A 9 ? A 15 ? 6 ? 1 A DG 10 1_555 A DG 4 1_555 -1.670 -3.557 0.000 -3.014 6.596 87.996 3 A_DG10:DG4_A A 10 ? A 4 ? 6 ? 1 A DG 16 1_555 A DG 22 1_555 1.494 3.579 0.093 2.778 -2.154 -88.756 4 A_DG16:DG22_A A 16 ? A 22 ? 6 ? 1 A DG 3 1_555 A DG 21 1_555 -1.639 -3.294 -0.124 -4.041 2.332 92.692 5 A_DG3:DG21_A A 3 ? A 21 ? 6 ? 1 A DT 13 1_555 B DA 2 1_555 -0.110 0.121 -0.161 28.795 -11.557 4.592 6 A_DT13:DA2_B A 13 ? B 2 ? 20 1 1 A DT 19 1_555 B DA 20 1_555 1.514 -1.860 -0.537 -15.818 -59.019 -123.507 7 A_DT19:DA20_B A 19 ? B 20 ? ? ? 1 B DT 1 1_555 B DA 8 1_555 -0.071 -0.170 0.365 -5.016 -9.956 3.159 8 B_DT1:DA8_B B 1 ? B 8 ? 20 1 1 B DG 15 1_555 B DG 21 1_555 1.758 3.593 -0.116 2.470 -5.435 -87.866 9 B_DG15:DG21_B B 15 ? B 21 ? 6 ? 1 B DG 16 1_555 B DG 22 1_555 1.476 3.566 -0.065 4.302 -6.151 -89.452 10 B_DG16:DG22_B B 16 ? B 22 ? 6 ? 1 B DG 17 1_555 B DG 23 1_555 1.662 3.199 -0.179 9.812 -13.479 -89.141 11 B_DG17:DG23_B B 17 ? B 23 ? 6 ? 1 B DG 11 1_555 B DG 5 1_555 -1.511 -3.428 0.086 -7.277 11.215 90.863 12 B_DG11:DG5_B B 11 ? B 5 ? 6 ? 1 B DG 10 1_555 B DG 4 1_555 -1.619 -3.509 0.148 -1.767 8.676 88.944 13 B_DG10:DG4_B B 10 ? B 4 ? 6 ? 1 B DG 9 1_555 B DG 3 1_555 -1.789 -3.480 0.047 -1.090 3.587 89.939 14 B_DG9:DG3_B B 9 ? B 3 ? 6 ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 9 1_555 A DG 15 1_555 A DG 10 1_555 A DG 4 1_555 0.706 1.680 3.238 2.966 0.131 -61.317 -1.652 0.829 3.201 -0.128 2.906 -61.382 1 AA_DG9DG10:DG4DG15_AA A 9 ? A 15 ? A 10 ? A 4 ? 1 A DG 10 1_555 A DG 4 1_555 A DG 16 1_555 A DG 22 1_555 1.500 3.440 -0.046 6.105 -4.216 -179.708 -1.720 0.750 -0.046 2.108 3.053 -179.708 2 AA_DG10DG16:DG22DG4_AA A 10 ? A 4 ? A 16 ? A 22 ? 1 A DG 16 1_555 A DG 22 1_555 A DG 3 1_555 A DG 21 1_555 -0.704 -1.735 -3.222 -5.182 -0.578 60.610 -1.741 0.938 -3.143 -0.571 5.125 60.812 3 AA_DG16DG3:DG21DG22_AA A 16 ? A 22 ? A 3 ? A 21 ? 1 B DG 15 1_555 B DG 21 1_555 B DG 16 1_555 B DG 22 1_555 -0.689 -0.697 3.309 -0.973 3.124 26.037 -2.380 1.254 3.228 6.898 2.148 26.238 4 BB_DG15DG16:DG22DG21_BB B 15 ? B 21 ? B 16 ? B 22 ? 1 B DG 16 1_555 B DG 22 1_555 B DG 17 1_555 B DG 23 1_555 -0.497 -0.472 3.164 1.192 3.719 30.018 -1.623 1.182 3.063 7.142 -2.290 30.265 5 BB_DG16DG17:DG23DG22_BB B 16 ? B 22 ? B 17 ? B 23 ? 1 B DG 17 1_555 B DG 23 1_555 B DG 11 1_555 B DG 5 1_555 -1.721 -3.466 0.100 -9.873 11.324 177.908 -1.734 0.861 0.096 5.663 4.937 177.926 6 BB_DG17DG11:DG5DG23_BB B 17 ? B 23 ? B 11 ? B 5 ? 1 B DG 11 1_555 B DG 5 1_555 B DG 10 1_555 B DG 4 1_555 0.594 0.529 -3.216 0.115 -3.669 -26.275 -2.095 1.266 -3.117 8.021 0.252 -26.526 7 BB_DG11DG10:DG4DG5_BB B 11 ? B 5 ? B 10 ? B 4 ? 1 B DG 10 1_555 B DG 4 1_555 B DG 9 1_555 B DG 3 1_555 0.564 0.878 -3.167 -2.156 -2.782 -28.508 -2.364 1.596 -3.020 5.623 -4.357 -28.720 8 BB_DG10DG9:DG3DG4_BB B 10 ? B 4 ? B 9 ? B 3 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone' NII 3 'POTASSIUM ION' K 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KF1 _pdbx_initial_refinement_model.details 'PDB ENTRY 1KF1' #