data_3DXX # _entry.id 3DXX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DXX pdb_00003dxx 10.2210/pdb3dxx/pdb RCSB RCSB048627 ? ? WWPDB D_1000048627 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DXX _pdbx_database_status.recvd_initial_deposition_date 2008-07-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3DXY . unspecified PDB 3DXZ . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhou, H.H.' 1 'Liu, Q.' 2 'Gao, Y.X.' 3 'Teng, M.K.' 4 'Niu, L.W.' 5 # _citation.id primary _citation.title 'Monomeric tRNA (m(7)G46) methyltransferase from Escherichia coli presents a novel structure at the function-essential insertion' _citation.journal_abbrev Proteins _citation.journal_volume 76 _citation.page_first 512 _citation.page_last 515 _citation.year 2009 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19373903 _citation.pdbx_database_id_DOI 10.1002/prot.22413 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhou, H.' 1 ? primary 'Liu, Q.' 2 ? primary 'Yang, W.' 3 ? primary 'Gao, Y.' 4 ? primary 'Teng, M.' 5 ? primary 'Niu, L.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'tRNA (guanine-N(7)-)-methyltransferase' 24831.371 1 2.1.1.33 ? 'UNP residues 33-239' ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 158 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'tRNA(m7G46)-methyltransferase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSGQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE EGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHML EVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVKLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSGQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE EGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHML EVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVKLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 GLY n 1 5 GLN n 1 6 GLU n 1 7 HIS n 1 8 ALA n 1 9 LEU n 1 10 GLU n 1 11 ASN n 1 12 TYR n 1 13 TRP n 1 14 PRO n 1 15 VAL n 1 16 MET n 1 17 GLY n 1 18 VAL n 1 19 GLU n 1 20 PHE n 1 21 SER n 1 22 GLU n 1 23 ASP n 1 24 MET n 1 25 LEU n 1 26 ASP n 1 27 PHE n 1 28 PRO n 1 29 ALA n 1 30 LEU n 1 31 PHE n 1 32 GLY n 1 33 ARG n 1 34 GLU n 1 35 ALA n 1 36 PRO n 1 37 VAL n 1 38 THR n 1 39 LEU n 1 40 GLU n 1 41 ILE n 1 42 GLY n 1 43 PHE n 1 44 GLY n 1 45 MET n 1 46 GLY n 1 47 ALA n 1 48 SER n 1 49 LEU n 1 50 VAL n 1 51 ALA n 1 52 MET n 1 53 ALA n 1 54 LYS n 1 55 ASP n 1 56 ARG n 1 57 PRO n 1 58 GLU n 1 59 GLN n 1 60 ASP n 1 61 PHE n 1 62 LEU n 1 63 GLY n 1 64 ILE n 1 65 GLU n 1 66 VAL n 1 67 HIS n 1 68 SER n 1 69 PRO n 1 70 GLY n 1 71 VAL n 1 72 GLY n 1 73 ALA n 1 74 CYS n 1 75 LEU n 1 76 ALA n 1 77 SER n 1 78 ALA n 1 79 HIS n 1 80 GLU n 1 81 GLU n 1 82 GLY n 1 83 LEU n 1 84 SER n 1 85 ASN n 1 86 LEU n 1 87 ARG n 1 88 VAL n 1 89 MET n 1 90 CYS n 1 91 HIS n 1 92 ASP n 1 93 ALA n 1 94 VAL n 1 95 GLU n 1 96 VAL n 1 97 LEU n 1 98 HIS n 1 99 LYS n 1 100 MET n 1 101 ILE n 1 102 PRO n 1 103 ASP n 1 104 ASN n 1 105 SER n 1 106 LEU n 1 107 ARG n 1 108 MET n 1 109 VAL n 1 110 GLN n 1 111 LEU n 1 112 PHE n 1 113 PHE n 1 114 PRO n 1 115 ASP n 1 116 PRO n 1 117 TRP n 1 118 HIS n 1 119 LYS n 1 120 ALA n 1 121 ARG n 1 122 HIS n 1 123 ASN n 1 124 LYS n 1 125 ARG n 1 126 ARG n 1 127 ILE n 1 128 VAL n 1 129 GLN n 1 130 VAL n 1 131 PRO n 1 132 PHE n 1 133 ALA n 1 134 GLU n 1 135 LEU n 1 136 VAL n 1 137 LYS n 1 138 SER n 1 139 LYS n 1 140 LEU n 1 141 GLN n 1 142 LEU n 1 143 GLY n 1 144 GLY n 1 145 VAL n 1 146 PHE n 1 147 HIS n 1 148 MET n 1 149 ALA n 1 150 THR n 1 151 ASP n 1 152 TRP n 1 153 GLU n 1 154 PRO n 1 155 TYR n 1 156 ALA n 1 157 GLU n 1 158 HIS n 1 159 MET n 1 160 LEU n 1 161 GLU n 1 162 VAL n 1 163 MET n 1 164 SER n 1 165 SER n 1 166 ILE n 1 167 ASP n 1 168 GLY n 1 169 TYR n 1 170 LYS n 1 171 ASN n 1 172 LEU n 1 173 SER n 1 174 GLU n 1 175 SER n 1 176 ASN n 1 177 ASP n 1 178 TYR n 1 179 VAL n 1 180 PRO n 1 181 ARG n 1 182 PRO n 1 183 ALA n 1 184 SER n 1 185 ARG n 1 186 PRO n 1 187 VAL n 1 188 THR n 1 189 LYS n 1 190 PHE n 1 191 GLU n 1 192 GLN n 1 193 ARG n 1 194 GLY n 1 195 HIS n 1 196 ARG n 1 197 LEU n 1 198 GLY n 1 199 HIS n 1 200 GLY n 1 201 VAL n 1 202 TRP n 1 203 ASP n 1 204 LEU n 1 205 MET n 1 206 PHE n 1 207 GLU n 1 208 ARG n 1 209 VAL n 1 210 LYS n 1 211 LEU n 1 212 GLU n 1 213 HIS n 1 214 HIS n 1 215 HIS n 1 216 HIS n 1 217 HIS n 1 218 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene trmB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 30 ? ? ? A . n A 1 2 GLY 2 31 ? ? ? A . n A 1 3 SER 3 32 ? ? ? A . n A 1 4 GLY 4 33 ? ? ? A . n A 1 5 GLN 5 34 ? ? ? A . n A 1 6 GLU 6 35 35 GLU GLU A . n A 1 7 HIS 7 36 36 HIS HIS A . n A 1 8 ALA 8 37 37 ALA ALA A . n A 1 9 LEU 9 38 38 LEU LEU A . n A 1 10 GLU 10 39 39 GLU GLU A . n A 1 11 ASN 11 40 40 ASN ASN A . n A 1 12 TYR 12 41 41 TYR TYR A . n A 1 13 TRP 13 42 42 TRP TRP A . n A 1 14 PRO 14 43 43 PRO PRO A . n A 1 15 VAL 15 44 44 VAL VAL A . n A 1 16 MET 16 45 45 MET MET A . n A 1 17 GLY 17 46 46 GLY GLY A . n A 1 18 VAL 18 47 47 VAL VAL A . n A 1 19 GLU 19 48 48 GLU GLU A . n A 1 20 PHE 20 49 49 PHE PHE A . n A 1 21 SER 21 50 50 SER SER A . n A 1 22 GLU 22 51 51 GLU GLU A . n A 1 23 ASP 23 52 52 ASP ASP A . n A 1 24 MET 24 53 53 MET MET A . n A 1 25 LEU 25 54 54 LEU LEU A . n A 1 26 ASP 26 55 55 ASP ASP A . n A 1 27 PHE 27 56 56 PHE PHE A . n A 1 28 PRO 28 57 57 PRO PRO A . n A 1 29 ALA 29 58 58 ALA ALA A . n A 1 30 LEU 30 59 59 LEU LEU A . n A 1 31 PHE 31 60 60 PHE PHE A . n A 1 32 GLY 32 61 61 GLY GLY A . n A 1 33 ARG 33 62 62 ARG ARG A . n A 1 34 GLU 34 63 63 GLU GLU A . n A 1 35 ALA 35 64 64 ALA ALA A . n A 1 36 PRO 36 65 65 PRO PRO A . n A 1 37 VAL 37 66 66 VAL VAL A . n A 1 38 THR 38 67 67 THR THR A . n A 1 39 LEU 39 68 68 LEU LEU A . n A 1 40 GLU 40 69 69 GLU GLU A . n A 1 41 ILE 41 70 70 ILE ILE A . n A 1 42 GLY 42 71 71 GLY GLY A . n A 1 43 PHE 43 72 72 PHE PHE A . n A 1 44 GLY 44 73 73 GLY GLY A . n A 1 45 MET 45 74 74 MET MET A . n A 1 46 GLY 46 75 75 GLY GLY A . n A 1 47 ALA 47 76 76 ALA ALA A . n A 1 48 SER 48 77 77 SER SER A . n A 1 49 LEU 49 78 78 LEU LEU A . n A 1 50 VAL 50 79 79 VAL VAL A . n A 1 51 ALA 51 80 80 ALA ALA A . n A 1 52 MET 52 81 81 MET MET A . n A 1 53 ALA 53 82 82 ALA ALA A . n A 1 54 LYS 54 83 83 LYS LYS A . n A 1 55 ASP 55 84 84 ASP ASP A . n A 1 56 ARG 56 85 85 ARG ARG A . n A 1 57 PRO 57 86 86 PRO PRO A . n A 1 58 GLU 58 87 87 GLU GLU A . n A 1 59 GLN 59 88 88 GLN GLN A . n A 1 60 ASP 60 89 89 ASP ASP A . n A 1 61 PHE 61 90 90 PHE PHE A . n A 1 62 LEU 62 91 91 LEU LEU A . n A 1 63 GLY 63 92 92 GLY GLY A . n A 1 64 ILE 64 93 93 ILE ILE A . n A 1 65 GLU 65 94 94 GLU GLU A . n A 1 66 VAL 66 95 95 VAL VAL A . n A 1 67 HIS 67 96 96 HIS HIS A . n A 1 68 SER 68 97 97 SER SER A . n A 1 69 PRO 69 98 98 PRO PRO A . n A 1 70 GLY 70 99 99 GLY GLY A . n A 1 71 VAL 71 100 100 VAL VAL A . n A 1 72 GLY 72 101 101 GLY GLY A . n A 1 73 ALA 73 102 102 ALA ALA A . n A 1 74 CYS 74 103 103 CYS CYS A . n A 1 75 LEU 75 104 104 LEU LEU A . n A 1 76 ALA 76 105 105 ALA ALA A . n A 1 77 SER 77 106 106 SER SER A . n A 1 78 ALA 78 107 107 ALA ALA A . n A 1 79 HIS 79 108 108 HIS HIS A . n A 1 80 GLU 80 109 109 GLU GLU A . n A 1 81 GLU 81 110 110 GLU GLU A . n A 1 82 GLY 82 111 111 GLY GLY A . n A 1 83 LEU 83 112 112 LEU LEU A . n A 1 84 SER 84 113 113 SER SER A . n A 1 85 ASN 85 114 114 ASN ASN A . n A 1 86 LEU 86 115 115 LEU LEU A . n A 1 87 ARG 87 116 116 ARG ARG A . n A 1 88 VAL 88 117 117 VAL VAL A . n A 1 89 MET 89 118 118 MET MET A . n A 1 90 CYS 90 119 119 CYS CYS A . n A 1 91 HIS 91 120 120 HIS HIS A . n A 1 92 ASP 92 121 121 ASP ASP A . n A 1 93 ALA 93 122 122 ALA ALA A . n A 1 94 VAL 94 123 123 VAL VAL A . n A 1 95 GLU 95 124 124 GLU GLU A . n A 1 96 VAL 96 125 125 VAL VAL A . n A 1 97 LEU 97 126 126 LEU LEU A . n A 1 98 HIS 98 127 127 HIS HIS A . n A 1 99 LYS 99 128 128 LYS LYS A . n A 1 100 MET 100 129 129 MET MET A . n A 1 101 ILE 101 130 130 ILE ILE A . n A 1 102 PRO 102 131 131 PRO PRO A . n A 1 103 ASP 103 132 132 ASP ASP A . n A 1 104 ASN 104 133 133 ASN ASN A . n A 1 105 SER 105 134 134 SER SER A . n A 1 106 LEU 106 135 135 LEU LEU A . n A 1 107 ARG 107 136 136 ARG ARG A . n A 1 108 MET 108 137 137 MET MET A . n A 1 109 VAL 109 138 138 VAL VAL A . n A 1 110 GLN 110 139 139 GLN GLN A . n A 1 111 LEU 111 140 140 LEU LEU A . n A 1 112 PHE 112 141 141 PHE PHE A . n A 1 113 PHE 113 142 142 PHE PHE A . n A 1 114 PRO 114 143 143 PRO PRO A . n A 1 115 ASP 115 144 144 ASP ASP A . n A 1 116 PRO 116 145 145 PRO PRO A . n A 1 117 TRP 117 146 146 TRP TRP A . n A 1 118 HIS 118 147 147 HIS HIS A . n A 1 119 LYS 119 148 148 LYS LYS A . n A 1 120 ALA 120 149 149 ALA ALA A . n A 1 121 ARG 121 150 150 ARG ARG A . n A 1 122 HIS 122 151 151 HIS HIS A . n A 1 123 ASN 123 152 152 ASN ASN A . n A 1 124 LYS 124 153 153 LYS LYS A . n A 1 125 ARG 125 154 154 ARG ARG A . n A 1 126 ARG 126 155 155 ARG ARG A . n A 1 127 ILE 127 156 156 ILE ILE A . n A 1 128 VAL 128 157 157 VAL VAL A . n A 1 129 GLN 129 158 158 GLN GLN A . n A 1 130 VAL 130 159 159 VAL VAL A . n A 1 131 PRO 131 160 160 PRO PRO A . n A 1 132 PHE 132 161 161 PHE PHE A . n A 1 133 ALA 133 162 162 ALA ALA A . n A 1 134 GLU 134 163 163 GLU GLU A . n A 1 135 LEU 135 164 164 LEU LEU A . n A 1 136 VAL 136 165 165 VAL VAL A . n A 1 137 LYS 137 166 166 LYS LYS A . n A 1 138 SER 138 167 167 SER SER A . n A 1 139 LYS 139 168 168 LYS LYS A . n A 1 140 LEU 140 169 169 LEU LEU A . n A 1 141 GLN 141 170 170 GLN GLN A . n A 1 142 LEU 142 171 171 LEU LEU A . n A 1 143 GLY 143 172 172 GLY GLY A . n A 1 144 GLY 144 173 173 GLY GLY A . n A 1 145 VAL 145 174 174 VAL VAL A . n A 1 146 PHE 146 175 175 PHE PHE A . n A 1 147 HIS 147 176 176 HIS HIS A . n A 1 148 MET 148 177 177 MET MET A . n A 1 149 ALA 149 178 178 ALA ALA A . n A 1 150 THR 150 179 179 THR THR A . n A 1 151 ASP 151 180 180 ASP ASP A . n A 1 152 TRP 152 181 181 TRP TRP A . n A 1 153 GLU 153 182 182 GLU GLU A . n A 1 154 PRO 154 183 183 PRO PRO A . n A 1 155 TYR 155 184 184 TYR TYR A . n A 1 156 ALA 156 185 185 ALA ALA A . n A 1 157 GLU 157 186 186 GLU GLU A . n A 1 158 HIS 158 187 187 HIS HIS A . n A 1 159 MET 159 188 188 MET MET A . n A 1 160 LEU 160 189 189 LEU LEU A . n A 1 161 GLU 161 190 190 GLU GLU A . n A 1 162 VAL 162 191 191 VAL VAL A . n A 1 163 MET 163 192 192 MET MET A . n A 1 164 SER 164 193 193 SER SER A . n A 1 165 SER 165 194 194 SER SER A . n A 1 166 ILE 166 195 195 ILE ILE A . n A 1 167 ASP 167 196 196 ASP ASP A . n A 1 168 GLY 168 197 197 GLY GLY A . n A 1 169 TYR 169 198 198 TYR TYR A . n A 1 170 LYS 170 199 199 LYS LYS A . n A 1 171 ASN 171 200 200 ASN ASN A . n A 1 172 LEU 172 201 201 LEU LEU A . n A 1 173 SER 173 202 202 SER SER A . n A 1 174 GLU 174 203 203 GLU GLU A . n A 1 175 SER 175 204 204 SER SER A . n A 1 176 ASN 176 205 205 ASN ASN A . n A 1 177 ASP 177 206 206 ASP ASP A . n A 1 178 TYR 178 207 207 TYR TYR A . n A 1 179 VAL 179 208 208 VAL VAL A . n A 1 180 PRO 180 209 209 PRO PRO A . n A 1 181 ARG 181 210 210 ARG ARG A . n A 1 182 PRO 182 211 211 PRO PRO A . n A 1 183 ALA 183 212 212 ALA ALA A . n A 1 184 SER 184 213 213 SER SER A . n A 1 185 ARG 185 214 214 ARG ARG A . n A 1 186 PRO 186 215 215 PRO PRO A . n A 1 187 VAL 187 216 216 VAL VAL A . n A 1 188 THR 188 217 217 THR THR A . n A 1 189 LYS 189 218 218 LYS LYS A . n A 1 190 PHE 190 219 219 PHE PHE A . n A 1 191 GLU 191 220 220 GLU GLU A . n A 1 192 GLN 192 221 221 GLN GLN A . n A 1 193 ARG 193 222 222 ARG ARG A . n A 1 194 GLY 194 223 223 GLY GLY A . n A 1 195 HIS 195 224 224 HIS HIS A . n A 1 196 ARG 196 225 225 ARG ARG A . n A 1 197 LEU 197 226 226 LEU LEU A . n A 1 198 GLY 198 227 227 GLY GLY A . n A 1 199 HIS 199 228 228 HIS HIS A . n A 1 200 GLY 200 229 229 GLY GLY A . n A 1 201 VAL 201 230 230 VAL VAL A . n A 1 202 TRP 202 231 231 TRP TRP A . n A 1 203 ASP 203 232 232 ASP ASP A . n A 1 204 LEU 204 233 233 LEU LEU A . n A 1 205 MET 205 234 234 MET MET A . n A 1 206 PHE 206 235 235 PHE PHE A . n A 1 207 GLU 207 236 236 GLU GLU A . n A 1 208 ARG 208 237 237 ARG ARG A . n A 1 209 VAL 209 238 238 VAL VAL A . n A 1 210 LYS 210 239 239 LYS LYS A . n A 1 211 LEU 211 240 240 LEU LEU A . n A 1 212 GLU 212 241 241 GLU GLU A . n A 1 213 HIS 213 242 242 HIS HIS A . n A 1 214 HIS 214 243 ? ? ? A . n A 1 215 HIS 215 244 ? ? ? A . n A 1 216 HIS 216 245 ? ? ? A . n A 1 217 HIS 217 246 ? ? ? A . n A 1 218 HIS 218 247 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 600 600 GOL GOL A . C 3 HOH 1 400 400 HOH HOH A . C 3 HOH 2 401 401 HOH HOH A . C 3 HOH 3 402 402 HOH HOH A . C 3 HOH 4 403 403 HOH HOH A . C 3 HOH 5 404 404 HOH HOH A . C 3 HOH 6 405 405 HOH HOH A . C 3 HOH 7 406 406 HOH HOH A . C 3 HOH 8 407 407 HOH HOH A . C 3 HOH 9 408 408 HOH HOH A . C 3 HOH 10 409 409 HOH HOH A . C 3 HOH 11 410 410 HOH HOH A . C 3 HOH 12 411 411 HOH HOH A . C 3 HOH 13 412 412 HOH HOH A . C 3 HOH 14 413 413 HOH HOH A . C 3 HOH 15 414 414 HOH HOH A . C 3 HOH 16 415 415 HOH HOH A . C 3 HOH 17 416 416 HOH HOH A . C 3 HOH 18 417 417 HOH HOH A . C 3 HOH 19 418 418 HOH HOH A . C 3 HOH 20 419 419 HOH HOH A . C 3 HOH 21 420 420 HOH HOH A . C 3 HOH 22 421 421 HOH HOH A . C 3 HOH 23 422 422 HOH HOH A . C 3 HOH 24 423 423 HOH HOH A . C 3 HOH 25 424 424 HOH HOH A . C 3 HOH 26 425 425 HOH HOH A . C 3 HOH 27 426 426 HOH HOH A . C 3 HOH 28 427 427 HOH HOH A . C 3 HOH 29 428 428 HOH HOH A . C 3 HOH 30 429 429 HOH HOH A . C 3 HOH 31 430 430 HOH HOH A . C 3 HOH 32 431 431 HOH HOH A . C 3 HOH 33 432 432 HOH HOH A . C 3 HOH 34 433 433 HOH HOH A . C 3 HOH 35 434 434 HOH HOH A . C 3 HOH 36 435 435 HOH HOH A . C 3 HOH 37 436 436 HOH HOH A . C 3 HOH 38 437 437 HOH HOH A . C 3 HOH 39 438 438 HOH HOH A . C 3 HOH 40 439 439 HOH HOH A . C 3 HOH 41 440 440 HOH HOH A . C 3 HOH 42 441 441 HOH HOH A . C 3 HOH 43 442 442 HOH HOH A . C 3 HOH 44 443 443 HOH HOH A . C 3 HOH 45 444 444 HOH HOH A . C 3 HOH 46 445 445 HOH HOH A . C 3 HOH 47 446 446 HOH HOH A . C 3 HOH 48 447 447 HOH HOH A . C 3 HOH 49 448 448 HOH HOH A . C 3 HOH 50 449 449 HOH HOH A . C 3 HOH 51 450 450 HOH HOH A . C 3 HOH 52 451 451 HOH HOH A . C 3 HOH 53 452 452 HOH HOH A . C 3 HOH 54 453 453 HOH HOH A . C 3 HOH 55 454 454 HOH HOH A . C 3 HOH 56 455 455 HOH HOH A . C 3 HOH 57 456 456 HOH HOH A . C 3 HOH 58 457 457 HOH HOH A . C 3 HOH 59 458 458 HOH HOH A . C 3 HOH 60 459 459 HOH HOH A . C 3 HOH 61 460 460 HOH HOH A . C 3 HOH 62 461 461 HOH HOH A . C 3 HOH 63 462 462 HOH HOH A . C 3 HOH 64 463 463 HOH HOH A . C 3 HOH 65 464 464 HOH HOH A . C 3 HOH 66 465 465 HOH HOH A . C 3 HOH 67 466 466 HOH HOH A . C 3 HOH 68 467 467 HOH HOH A . C 3 HOH 69 468 468 HOH HOH A . C 3 HOH 70 469 469 HOH HOH A . C 3 HOH 71 470 470 HOH HOH A . C 3 HOH 72 471 471 HOH HOH A . C 3 HOH 73 472 472 HOH HOH A . C 3 HOH 74 473 473 HOH HOH A . C 3 HOH 75 474 474 HOH HOH A . C 3 HOH 76 475 475 HOH HOH A . C 3 HOH 77 476 476 HOH HOH A . C 3 HOH 78 477 477 HOH HOH A . C 3 HOH 79 478 478 HOH HOH A . C 3 HOH 80 479 479 HOH HOH A . C 3 HOH 81 480 480 HOH HOH A . C 3 HOH 82 481 481 HOH HOH A . C 3 HOH 83 482 482 HOH HOH A . C 3 HOH 84 483 483 HOH HOH A . C 3 HOH 85 484 484 HOH HOH A . C 3 HOH 86 485 485 HOH HOH A . C 3 HOH 87 486 486 HOH HOH A . C 3 HOH 88 487 487 HOH HOH A . C 3 HOH 89 488 488 HOH HOH A . C 3 HOH 90 489 489 HOH HOH A . C 3 HOH 91 490 490 HOH HOH A . C 3 HOH 92 491 491 HOH HOH A . C 3 HOH 93 492 492 HOH HOH A . C 3 HOH 94 493 493 HOH HOH A . C 3 HOH 95 494 494 HOH HOH A . C 3 HOH 96 495 495 HOH HOH A . C 3 HOH 97 496 496 HOH HOH A . C 3 HOH 98 497 497 HOH HOH A . C 3 HOH 99 498 498 HOH HOH A . C 3 HOH 100 499 499 HOH HOH A . C 3 HOH 101 500 500 HOH HOH A . C 3 HOH 102 501 501 HOH HOH A . C 3 HOH 103 502 502 HOH HOH A . C 3 HOH 104 503 503 HOH HOH A . C 3 HOH 105 504 504 HOH HOH A . C 3 HOH 106 505 505 HOH HOH A . C 3 HOH 107 506 506 HOH HOH A . C 3 HOH 108 507 507 HOH HOH A . C 3 HOH 109 508 508 HOH HOH A . C 3 HOH 110 509 509 HOH HOH A . C 3 HOH 111 510 510 HOH HOH A . C 3 HOH 112 511 511 HOH HOH A . C 3 HOH 113 512 512 HOH HOH A . C 3 HOH 114 513 513 HOH HOH A . C 3 HOH 115 514 514 HOH HOH A . C 3 HOH 116 515 515 HOH HOH A . C 3 HOH 117 516 516 HOH HOH A . C 3 HOH 118 517 517 HOH HOH A . C 3 HOH 119 518 518 HOH HOH A . C 3 HOH 120 519 519 HOH HOH A . C 3 HOH 121 520 520 HOH HOH A . C 3 HOH 122 521 521 HOH HOH A . C 3 HOH 123 522 522 HOH HOH A . C 3 HOH 124 523 523 HOH HOH A . C 3 HOH 125 524 524 HOH HOH A . C 3 HOH 126 525 525 HOH HOH A . C 3 HOH 127 526 526 HOH HOH A . C 3 HOH 128 527 527 HOH HOH A . C 3 HOH 129 528 528 HOH HOH A . C 3 HOH 130 529 529 HOH HOH A . C 3 HOH 131 530 530 HOH HOH A . C 3 HOH 132 531 531 HOH HOH A . C 3 HOH 133 532 532 HOH HOH A . C 3 HOH 134 533 533 HOH HOH A . C 3 HOH 135 534 534 HOH HOH A . C 3 HOH 136 535 535 HOH HOH A . C 3 HOH 137 536 536 HOH HOH A . C 3 HOH 138 537 537 HOH HOH A . C 3 HOH 139 538 538 HOH HOH A . C 3 HOH 140 539 539 HOH HOH A . C 3 HOH 141 540 540 HOH HOH A . C 3 HOH 142 541 541 HOH HOH A . C 3 HOH 143 542 542 HOH HOH A . C 3 HOH 144 543 543 HOH HOH A . C 3 HOH 145 544 544 HOH HOH A . C 3 HOH 146 545 545 HOH HOH A . C 3 HOH 147 546 546 HOH HOH A . C 3 HOH 148 547 547 HOH HOH A . C 3 HOH 149 548 548 HOH HOH A . C 3 HOH 150 549 549 HOH HOH A . C 3 HOH 151 550 550 HOH HOH A . C 3 HOH 152 551 551 HOH HOH A . C 3 HOH 153 552 552 HOH HOH A . C 3 HOH 154 553 553 HOH HOH A . C 3 HOH 155 554 554 HOH HOH A . C 3 HOH 156 555 555 HOH HOH A . C 3 HOH 157 556 556 HOH HOH A . C 3 HOH 158 557 557 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 35 ? CG ? A GLU 6 CG 2 1 Y 0 A GLU 35 ? CD ? A GLU 6 CD 3 1 Y 0 A GLU 35 ? OE1 ? A GLU 6 OE1 4 1 Y 0 A GLU 35 ? OE2 ? A GLU 6 OE2 5 1 Y 0 A HIS 36 ? CG ? A HIS 7 CG 6 1 Y 0 A HIS 36 ? ND1 ? A HIS 7 ND1 7 1 Y 0 A HIS 36 ? CD2 ? A HIS 7 CD2 8 1 Y 0 A HIS 36 ? CE1 ? A HIS 7 CE1 9 1 Y 0 A HIS 36 ? NE2 ? A HIS 7 NE2 10 1 Y 0 A LYS 218 ? CG ? A LYS 189 CG 11 1 Y 0 A LYS 218 ? CD ? A LYS 189 CD 12 1 Y 0 A LYS 218 ? CE ? A LYS 189 CE 13 1 Y 0 A LYS 218 ? NZ ? A LYS 189 NZ 14 1 Y 0 A LEU 226 ? CB ? A LEU 197 CB 15 1 Y 0 A LEU 226 ? CG ? A LEU 197 CG 16 1 Y 0 A LEU 226 ? CD1 ? A LEU 197 CD1 17 1 Y 0 A LEU 226 ? CD2 ? A LEU 197 CD2 18 1 Y 0 A GLU 241 ? CG ? A GLU 212 CG 19 1 Y 0 A GLU 241 ? CD ? A GLU 212 CD 20 1 Y 0 A GLU 241 ? OE1 ? A GLU 212 OE1 21 1 Y 0 A GLU 241 ? OE2 ? A GLU 212 OE2 22 1 Y 0 A HIS 242 ? CB ? A HIS 213 CB 23 1 Y 0 A HIS 242 ? CG ? A HIS 213 CG 24 1 Y 0 A HIS 242 ? ND1 ? A HIS 213 ND1 25 1 Y 0 A HIS 242 ? CD2 ? A HIS 213 CD2 26 1 Y 0 A HIS 242 ? CE1 ? A HIS 213 CE1 27 1 Y 0 A HIS 242 ? NE2 ? A HIS 213 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MAR345dtb 'data collection' . ? 2 MOSFLM 'data reduction' . ? 3 SCALA 'data scaling' . ? 4 SOLVE phasing . ? 5 # _cell.entry_id 3DXX _cell.length_a 46.420 _cell.length_b 47.010 _cell.length_c 58.640 _cell.angle_alpha 90.00 _cell.angle_beta 90.01 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DXX _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3DXX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.58 _exptl_crystal.density_percent_sol 52.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details '15% (w/v) PEG 3350, 150mM MgSO4, VAPOR DIFFUSION, HANGING DROP, temperature 283K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2007-03-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3DXX _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 46.42 _reflns.d_resolution_high 2.04 _reflns.d_resolution_low 24.79 _reflns.number_all ? _reflns.number_obs 15183 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3DXX _refine.ls_number_reflns_obs 14404 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.79 _refine.ls_d_res_high 2.05 _refine.ls_percent_reflns_obs 94.10 _refine.ls_R_factor_obs 0.19457 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19283 _refine.ls_R_factor_R_free 0.22687 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 766 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.935 _refine.correlation_coeff_Fo_to_Fc_free 0.913 _refine.B_iso_mean 20.082 _refine.aniso_B[1][1] 0.74 _refine.aniso_B[2][2] -0.16 _refine.aniso_B[3][3] -0.58 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.02 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.206 _refine.pdbx_overall_ESU_R_Free 0.171 _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1662 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 158 _refine_hist.number_atoms_total 1826 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 24.79 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.021 ? 1697 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.244 1.950 ? 2298 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.466 5.000 ? 211 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.116 23.457 ? 81 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.696 15.000 ? 279 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9.745 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.085 0.200 ? 239 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1317 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.197 0.200 ? 786 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.301 0.200 ? 1131 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.109 0.200 ? 135 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.160 0.200 ? 29 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.139 0.200 ? 13 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.429 1.500 ? 1041 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.788 2.000 ? 1669 'X-RAY DIFFRACTION' ? r_scbond_it 1.347 3.000 ? 656 'X-RAY DIFFRACTION' ? r_scangle_it 2.189 4.500 ? 627 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.048 _refine_ls_shell.d_res_low 2.101 _refine_ls_shell.number_reflns_R_work 1002 _refine_ls_shell.R_factor_R_work 0.179 _refine_ls_shell.percent_reflns_obs 89.61 _refine_ls_shell.R_factor_R_free 0.209 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 67 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3DXX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3DXX _struct.title 'Crystal structure of EcTrmB' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DXX _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'Rossmann fold methyltransferase, tRNA modification, Methyltransferase, S-adenosyl-L-methionine, Transferase, tRNA processing' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRMB_ECOLI _struct_ref.pdbx_db_accession P0A8I5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL SNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVM SSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK ; _struct_ref.pdbx_align_begin 33 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DXX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 210 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0A8I5 _struct_ref_seq.db_align_beg 33 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 239 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 33 _struct_ref_seq.pdbx_auth_seq_align_end 239 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DXX MET A 1 ? UNP P0A8I5 ? ? 'expression tag' 30 1 1 3DXX GLY A 2 ? UNP P0A8I5 ? ? 'expression tag' 31 2 1 3DXX SER A 3 ? UNP P0A8I5 ? ? 'expression tag' 32 3 1 3DXX LEU A 211 ? UNP P0A8I5 ? ? 'expression tag' 240 4 1 3DXX GLU A 212 ? UNP P0A8I5 ? ? 'expression tag' 241 5 1 3DXX HIS A 213 ? UNP P0A8I5 ? ? 'expression tag' 242 6 1 3DXX HIS A 214 ? UNP P0A8I5 ? ? 'expression tag' 243 7 1 3DXX HIS A 215 ? UNP P0A8I5 ? ? 'expression tag' 244 8 1 3DXX HIS A 216 ? UNP P0A8I5 ? ? 'expression tag' 245 9 1 3DXX HIS A 217 ? UNP P0A8I5 ? ? 'expression tag' 246 10 1 3DXX HIS A 218 ? UNP P0A8I5 ? ? 'expression tag' 247 11 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 7 ? GLY A 17 ? HIS A 36 GLY A 46 1 ? 11 HELX_P HELX_P2 2 ASP A 26 ? GLY A 32 ? ASP A 55 GLY A 61 1 ? 7 HELX_P HELX_P3 3 GLY A 46 ? ARG A 56 ? GLY A 75 ARG A 85 1 ? 11 HELX_P HELX_P4 4 HIS A 67 ? GLU A 81 ? HIS A 96 GLU A 110 1 ? 15 HELX_P HELX_P5 5 ASP A 92 ? ILE A 101 ? ASP A 121 ILE A 130 1 ? 10 HELX_P HELX_P6 6 LYS A 119 ? ARG A 126 ? LYS A 148 ARG A 155 5 ? 8 HELX_P HELX_P7 7 GLN A 129 ? LYS A 139 ? GLN A 158 LYS A 168 1 ? 11 HELX_P HELX_P8 8 TRP A 152 ? SER A 165 ? TRP A 181 SER A 194 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 86 ? MET A 89 ? LEU A 115 MET A 118 A 2 ASP A 60 ? ILE A 64 ? ASP A 89 ILE A 93 A 3 VAL A 37 ? ILE A 41 ? VAL A 66 ILE A 70 A 4 LEU A 106 ? PHE A 112 ? LEU A 135 PHE A 141 A 5 LEU A 140 ? THR A 150 ? LEU A 169 THR A 179 A 6 TRP A 202 ? ARG A 208 ? TRP A 231 ARG A 237 A 7 TYR A 169 ? ASN A 171 ? TYR A 198 ASN A 200 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O MET A 89 ? O MET A 118 N GLY A 63 ? N GLY A 92 A 2 3 O LEU A 62 ? O LEU A 91 N THR A 38 ? N THR A 67 A 3 4 N ILE A 41 ? N ILE A 70 O GLN A 110 ? O GLN A 139 A 4 5 N VAL A 109 ? N VAL A 138 O HIS A 147 ? O HIS A 176 A 5 6 N THR A 150 ? N THR A 179 O TRP A 202 ? O TRP A 231 A 6 7 O GLU A 207 ? O GLU A 236 N LYS A 170 ? N LYS A 199 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GOL _struct_site.pdbx_auth_seq_id 600 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE GOL A 600' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLY A 198 ? GLY A 227 . ? 1_555 ? 2 AC1 4 HIS A 199 ? HIS A 228 . ? 1_555 ? 3 AC1 4 GLY A 200 ? GLY A 229 . ? 1_555 ? 4 AC1 4 TRP A 202 ? TRP A 231 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 206 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -140.40 _pdbx_validate_torsion.psi -75.89 # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -19.1091 _pdbx_refine_tls.origin_y -0.3987 _pdbx_refine_tls.origin_z -16.9904 _pdbx_refine_tls.T[1][1] -0.0276 _pdbx_refine_tls.T[2][2] -0.0217 _pdbx_refine_tls.T[3][3] -0.0399 _pdbx_refine_tls.T[1][2] -0.0213 _pdbx_refine_tls.T[1][3] -0.0010 _pdbx_refine_tls.T[2][3] 0.0027 _pdbx_refine_tls.L[1][1] 0.4921 _pdbx_refine_tls.L[2][2] 0.7557 _pdbx_refine_tls.L[3][3] 0.5729 _pdbx_refine_tls.L[1][2] -0.1530 _pdbx_refine_tls.L[1][3] -0.1001 _pdbx_refine_tls.L[2][3] 0.1738 _pdbx_refine_tls.S[1][1] -0.0281 _pdbx_refine_tls.S[1][2] 0.0085 _pdbx_refine_tls.S[1][3] -0.0086 _pdbx_refine_tls.S[2][1] 0.0154 _pdbx_refine_tls.S[2][2] 0.0301 _pdbx_refine_tls.S[2][3] -0.0070 _pdbx_refine_tls.S[3][1] -0.0027 _pdbx_refine_tls.S[3][2] 0.0153 _pdbx_refine_tls.S[3][3] -0.0020 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 35 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 6 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 242 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 213 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 30 ? A MET 1 2 1 Y 1 A GLY 31 ? A GLY 2 3 1 Y 1 A SER 32 ? A SER 3 4 1 Y 1 A GLY 33 ? A GLY 4 5 1 Y 1 A GLN 34 ? A GLN 5 6 1 Y 1 A HIS 243 ? A HIS 214 7 1 Y 1 A HIS 244 ? A HIS 215 8 1 Y 1 A HIS 245 ? A HIS 216 9 1 Y 1 A HIS 246 ? A HIS 217 10 1 Y 1 A HIS 247 ? A HIS 218 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TRP N N N N 335 TRP CA C N S 336 TRP C C N N 337 TRP O O N N 338 TRP CB C N N 339 TRP CG C Y N 340 TRP CD1 C Y N 341 TRP CD2 C Y N 342 TRP NE1 N Y N 343 TRP CE2 C Y N 344 TRP CE3 C Y N 345 TRP CZ2 C Y N 346 TRP CZ3 C Y N 347 TRP CH2 C Y N 348 TRP OXT O N N 349 TRP H H N N 350 TRP H2 H N N 351 TRP HA H N N 352 TRP HB2 H N N 353 TRP HB3 H N N 354 TRP HD1 H N N 355 TRP HE1 H N N 356 TRP HE3 H N N 357 TRP HZ2 H N N 358 TRP HZ3 H N N 359 TRP HH2 H N N 360 TRP HXT H N N 361 TYR N N N N 362 TYR CA C N S 363 TYR C C N N 364 TYR O O N N 365 TYR CB C N N 366 TYR CG C Y N 367 TYR CD1 C Y N 368 TYR CD2 C Y N 369 TYR CE1 C Y N 370 TYR CE2 C Y N 371 TYR CZ C Y N 372 TYR OH O N N 373 TYR OXT O N N 374 TYR H H N N 375 TYR H2 H N N 376 TYR HA H N N 377 TYR HB2 H N N 378 TYR HB3 H N N 379 TYR HD1 H N N 380 TYR HD2 H N N 381 TYR HE1 H N N 382 TYR HE2 H N N 383 TYR HH H N N 384 TYR HXT H N N 385 VAL N N N N 386 VAL CA C N S 387 VAL C C N N 388 VAL O O N N 389 VAL CB C N N 390 VAL CG1 C N N 391 VAL CG2 C N N 392 VAL OXT O N N 393 VAL H H N N 394 VAL H2 H N N 395 VAL HA H N N 396 VAL HB H N N 397 VAL HG11 H N N 398 VAL HG12 H N N 399 VAL HG13 H N N 400 VAL HG21 H N N 401 VAL HG22 H N N 402 VAL HG23 H N N 403 VAL HXT H N N 404 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # _atom_sites.entry_id 3DXX _atom_sites.fract_transf_matrix[1][1] 0.021542 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000004 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021272 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017053 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_