data_3DYB # _entry.id 3DYB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DYB pdb_00003dyb 10.2210/pdb3dyb/pdb RCSB RCSB048641 ? ? WWPDB D_1000048641 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DYB _pdbx_database_status.recvd_initial_deposition_date 2008-07-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Larson, S.B.' 1 'Day, J.S.' 2 'McPherson, A.' 3 'Cudney, R.' 4 'Nguyen, C.' 5 'Center for High-Throughput Structural Biology (CHTSB)' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'High-resolution structure of proteinase K cocrystallized with digalacturonic acid.' 'Acta Crystallogr.,Sect.F' 65 192 198 2009 ? DK 1744-3091 ? ? 19255463 10.1107/S1744309109002218 1 'Progress in the Development of an Alternative Approach to Macromolecular Crystallization' 'CRYST.GROWTH DES.' 8 3038 3052 2008 ? US 1528-7483 ? ? ? 10.1021/cg800174n # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Larson, S.B.' 1 ? primary 'Day, J.S.' 2 ? primary 'Nguyen, C.' 3 ? primary 'Cudney, R.' 4 ? primary 'McPherson, A.' 5 ? 1 'Larson, S.B.' 6 ? 1 'Day, J.S.' 7 ? 1 'Nguyen, C.' 8 ? 1 'Cudney, R.' 9 ? 1 'McPherson, A.' 10 ? # _cell.entry_id 3DYB _cell.length_a 67.720 _cell.length_b 67.720 _cell.length_c 101.890 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DYB _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Proteinase K' 28958.791 1 3.4.21.64 ? ? ? 2 branched man 'alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid' 370.263 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 5 water nat water 18.015 341 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Tritirachium alkaline proteinase, Endopeptidase K' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTDILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; _entity_poly.pdbx_seq_one_letter_code_can ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTDILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 GLN n 1 4 THR n 1 5 ASN n 1 6 ALA n 1 7 PRO n 1 8 TRP n 1 9 GLY n 1 10 LEU n 1 11 ALA n 1 12 ARG n 1 13 ILE n 1 14 SER n 1 15 SER n 1 16 THR n 1 17 SER n 1 18 PRO n 1 19 GLY n 1 20 THR n 1 21 SER n 1 22 THR n 1 23 TYR n 1 24 TYR n 1 25 TYR n 1 26 ASP n 1 27 GLU n 1 28 SER n 1 29 ALA n 1 30 GLY n 1 31 GLN n 1 32 GLY n 1 33 SER n 1 34 CYS n 1 35 VAL n 1 36 TYR n 1 37 VAL n 1 38 ILE n 1 39 ASP n 1 40 THR n 1 41 GLY n 1 42 ILE n 1 43 GLU n 1 44 ALA n 1 45 SER n 1 46 HIS n 1 47 PRO n 1 48 GLU n 1 49 PHE n 1 50 GLU n 1 51 GLY n 1 52 ARG n 1 53 ALA n 1 54 GLN n 1 55 MET n 1 56 VAL n 1 57 LYS n 1 58 THR n 1 59 TYR n 1 60 TYR n 1 61 TYR n 1 62 SER n 1 63 SER n 1 64 ARG n 1 65 ASP n 1 66 GLY n 1 67 ASN n 1 68 GLY n 1 69 HIS n 1 70 GLY n 1 71 THR n 1 72 HIS n 1 73 CYS n 1 74 ALA n 1 75 GLY n 1 76 THR n 1 77 VAL n 1 78 GLY n 1 79 SER n 1 80 ARG n 1 81 THR n 1 82 TYR n 1 83 GLY n 1 84 VAL n 1 85 ALA n 1 86 LYS n 1 87 LYS n 1 88 THR n 1 89 GLN n 1 90 LEU n 1 91 PHE n 1 92 GLY n 1 93 VAL n 1 94 LYS n 1 95 VAL n 1 96 LEU n 1 97 ASP n 1 98 ASP n 1 99 ASN n 1 100 GLY n 1 101 SER n 1 102 GLY n 1 103 GLN n 1 104 TYR n 1 105 SER n 1 106 THR n 1 107 ILE n 1 108 ILE n 1 109 ALA n 1 110 GLY n 1 111 MET n 1 112 ASP n 1 113 PHE n 1 114 VAL n 1 115 ALA n 1 116 SER n 1 117 ASP n 1 118 LYS n 1 119 ASN n 1 120 ASN n 1 121 ARG n 1 122 ASN n 1 123 CYS n 1 124 PRO n 1 125 LYS n 1 126 GLY n 1 127 VAL n 1 128 VAL n 1 129 ALA n 1 130 SER n 1 131 LEU n 1 132 SER n 1 133 LEU n 1 134 GLY n 1 135 GLY n 1 136 GLY n 1 137 TYR n 1 138 SER n 1 139 SER n 1 140 SER n 1 141 VAL n 1 142 ASN n 1 143 SER n 1 144 ALA n 1 145 ALA n 1 146 ALA n 1 147 ARG n 1 148 LEU n 1 149 GLN n 1 150 SER n 1 151 SER n 1 152 GLY n 1 153 VAL n 1 154 MET n 1 155 VAL n 1 156 ALA n 1 157 VAL n 1 158 ALA n 1 159 ALA n 1 160 GLY n 1 161 ASN n 1 162 ASN n 1 163 ASN n 1 164 ALA n 1 165 ASP n 1 166 ALA n 1 167 ARG n 1 168 ASN n 1 169 TYR n 1 170 SER n 1 171 PRO n 1 172 ALA n 1 173 SER n 1 174 GLU n 1 175 PRO n 1 176 SER n 1 177 VAL n 1 178 CYS n 1 179 THR n 1 180 VAL n 1 181 GLY n 1 182 ALA n 1 183 SER n 1 184 ASP n 1 185 ARG n 1 186 TYR n 1 187 ASP n 1 188 ARG n 1 189 ARG n 1 190 SER n 1 191 SER n 1 192 PHE n 1 193 SER n 1 194 ASN n 1 195 TYR n 1 196 GLY n 1 197 SER n 1 198 VAL n 1 199 LEU n 1 200 ASP n 1 201 ILE n 1 202 PHE n 1 203 GLY n 1 204 PRO n 1 205 GLY n 1 206 THR n 1 207 ASP n 1 208 ILE n 1 209 LEU n 1 210 SER n 1 211 THR n 1 212 TRP n 1 213 ILE n 1 214 GLY n 1 215 GLY n 1 216 SER n 1 217 THR n 1 218 ARG n 1 219 SER n 1 220 ILE n 1 221 SER n 1 222 GLY n 1 223 THR n 1 224 SER n 1 225 MET n 1 226 ALA n 1 227 THR n 1 228 PRO n 1 229 HIS n 1 230 VAL n 1 231 ALA n 1 232 GLY n 1 233 LEU n 1 234 ALA n 1 235 ALA n 1 236 TYR n 1 237 LEU n 1 238 MET n 1 239 THR n 1 240 LEU n 1 241 GLY n 1 242 LYS n 1 243 THR n 1 244 THR n 1 245 ALA n 1 246 ALA n 1 247 SER n 1 248 ALA n 1 249 CYS n 1 250 ARG n 1 251 TYR n 1 252 ILE n 1 253 ALA n 1 254 ASP n 1 255 THR n 1 256 ALA n 1 257 ASN n 1 258 LYS n 1 259 GLY n 1 260 ASP n 1 261 LEU n 1 262 SER n 1 263 ASN n 1 264 ILE n 1 265 PRO n 1 266 PHE n 1 267 GLY n 1 268 THR n 1 269 VAL n 1 270 ASN n 1 271 LEU n 1 272 LEU n 1 273 ALA n 1 274 TYR n 1 275 ASN n 1 276 ASN n 1 277 TYR n 1 278 GLN n 1 279 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'Engyodontium album' _entity_src_nat.pdbx_organism_scientific 'Engyodontium album' _entity_src_nat.pdbx_ncbi_taxonomy_id 37998 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PRTK_TRIAL _struct_ref.pdbx_db_accession P06873 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; _struct_ref.pdbx_align_begin 106 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DYB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 279 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06873 _struct_ref_seq.db_align_beg 106 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 384 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 279 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3DYB _struct_ref_seq_dif.mon_id ASP _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 207 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P06873 _struct_ref_seq_dif.db_mon_id SER _struct_ref_seq_dif.pdbx_seq_db_seq_num 312 _struct_ref_seq_dif.details 'SEE REMARK 999' _struct_ref_seq_dif.pdbx_auth_seq_num 207 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADA 'D-saccharide, alpha linking' . 'alpha-D-galactopyranuronic acid' 'alpha-D-galacturonic acid; D-galacturonic acid; galacturonic acid; ALPHA D-GALACTURONIC ACID' 'C6 H10 O7' 194.139 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3DYB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_percent_sol 39.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '5% PEG 3350, 0.1 M HEPES; reservoir of 25% PEG 3350, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2006-11-26 _diffrn_detector.details 'Osmic Mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54178 # _reflns.entry_id 3DYB _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.32 _reflns.d_resolution_low 32.14 _reflns.number_all 53100 _reflns.number_obs 53026 _reflns.percent_possible_obs 94.0 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 15.9 _reflns.pdbx_redundancy 5.33 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI 11.5 _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.32 _reflns_shell.d_res_low 1.37 _reflns_shell.percent_possible_all 46.2 _reflns_shell.Rmerge_I_obs 0.482 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.pdbx_redundancy 1.50 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2566 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DYB _refine.ls_number_reflns_obs 49454 _refine.ls_number_reflns_all 49454 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.36 _refine.ls_d_res_high 1.32 _refine.ls_percent_reflns_obs 92.33 _refine.ls_R_factor_obs 0.16036 _refine.ls_R_factor_all 0.16036 _refine.ls_R_factor_R_work 0.1579 _refine.ls_R_factor_R_free 0.20669 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2646 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.977 _refine.correlation_coeff_Fo_to_Fc_free 0.964 _refine.B_iso_mean 15.875 _refine.aniso_B[1][1] -0.45 _refine.aniso_B[2][2] -0.45 _refine.aniso_B[3][3] 0.90 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS FOR ALL NON-WATER MOLECULES HAVE BEEN ADDED IN THE RIDING POSITION AND ADJUSTED TO AVOID STERIC PROBLEMS. OCCUPANCIES FOR HYDROGENS WERE SET TO THE OCCUPANCY OF THE ATOM TO WHICH THE HYDROGEN WAS ATTACHED. THE ATOMS OF AD0 HAVING ZERO OCCUPANCY WERE INCLUDED AS A COMPLETE DESCRIPTION OF THE LIGAND. THERE WAS NO ELECTRON DENSITY TO INDICATE WHERE THIS PYRANOSE RING BELONGED. HOWEVER, THERE WAS DENSITY SUGGESTIVE OF WATER MOLECULES IN THIS REGION AND, THEREFORE, WAS MODELED AS SUCH. HENCE, THERE APPEARS TO BE CLOSE CONTACTS AS SHOWN IN REMARK 500. THERE IS EXCELLENT DENSITY FOR EACH OF THE RESIDUES DESCRIBED IN REMARK 500 AS RAMACHANDRAN OUTLIERS. ; _refine.pdbx_starting_model 'PDB ENTRY 3PRK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ANISOTROPIC _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.067 _refine.pdbx_overall_ESU_R_Free 0.064 _refine.overall_SU_ML 0.049 _refine.overall_SU_B 2.839 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2032 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 341 _refine_hist.number_atoms_total 2415 _refine_hist.d_res_high 1.32 _refine_hist.d_res_low 30.36 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.021 ? 2199 'X-RAY DIFFRACTION' ? r_bond_other_d 0.000 0.020 ? 2067 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.265 1.951 ? 3015 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.674 3.000 ? 4665 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.234 5.000 ? 311 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.854 23.736 ? 91 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.819 15.000 ? 329 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.321 15.000 ? 14 'X-RAY DIFFRACTION' ? r_chiral_restr 0.078 0.200 ? 335 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 2566 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.000 0.020 ? 537 'X-RAY DIFFRACTION' ? r_mcbond_it 2.568 2.000 ? 1422 'X-RAY DIFFRACTION' ? r_mcbond_other 2.262 2.000 ? 601 'X-RAY DIFFRACTION' ? r_mcangle_it 3.353 4.000 ? 2281 'X-RAY DIFFRACTION' ? r_scbond_it 4.085 4.000 ? 777 'X-RAY DIFFRACTION' ? r_scangle_it 5.315 6.000 ? 717 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.377 3.000 ? 2198 'X-RAY DIFFRACTION' ? r_sphericity_free 8.481 3.000 ? 380 'X-RAY DIFFRACTION' ? r_sphericity_bonded 4.871 3.000 ? 2140 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 20 1.319 1.353 1119 0.456 28.83 0.475 . . 67 . 0.457 4114 . 'X-RAY DIFFRACTION' 20 1.353 1.390 2876 0.394 76.16 0.474 . . 163 . 0.399 3990 . 'X-RAY DIFFRACTION' 20 1.390 1.431 3445 0.376 93.70 0.425 . . 185 . 0.379 3874 . 'X-RAY DIFFRACTION' 20 1.431 1.475 3589 0.331 99.34 0.400 . . 198 . 0.334 3812 . 'X-RAY DIFFRACTION' 20 1.475 1.523 3441 0.297 99.51 0.406 . . 185 . 0.303 3644 . 'X-RAY DIFFRACTION' 20 1.523 1.576 3394 0.255 99.61 0.307 . . 152 . 0.257 3560 . 'X-RAY DIFFRACTION' 20 1.576 1.636 3254 0.211 99.62 0.306 . . 162 . 0.216 3429 . 'X-RAY DIFFRACTION' 20 1.636 1.702 3139 0.177 99.58 0.266 . . 170 . 0.182 3323 . 'X-RAY DIFFRACTION' 20 1.702 1.778 3002 0.148 99.56 0.222 . . 172 . 0.152 3188 . 'X-RAY DIFFRACTION' 20 1.778 1.864 2869 0.126 99.41 0.217 . . 157 . 0.131 3044 . 'X-RAY DIFFRACTION' 20 1.864 1.964 2755 0.115 99.55 0.178 . . 137 . 0.118 2905 . 'X-RAY DIFFRACTION' 20 1.964 2.083 2622 0.113 99.64 0.176 . . 132 . 0.116 2764 . 'X-RAY DIFFRACTION' 20 2.083 2.226 2455 0.115 99.46 0.175 . . 142 . 0.118 2611 . 'X-RAY DIFFRACTION' 20 2.226 2.403 2279 0.117 99.79 0.145 . . 141 . 0.119 2425 . 'X-RAY DIFFRACTION' 20 2.403 2.631 2124 0.118 99.51 0.169 . . 113 . 0.120 2248 . 'X-RAY DIFFRACTION' 20 2.631 2.939 1947 0.123 99.66 0.157 . . 108 . 0.125 2062 . 'X-RAY DIFFRACTION' 20 2.939 3.388 1730 0.118 99.51 0.159 . . 97 . 0.120 1836 . 'X-RAY DIFFRACTION' 20 3.388 4.137 1482 0.112 99.68 0.145 . . 76 . 0.114 1563 . 'X-RAY DIFFRACTION' 20 4.137 5.797 1203 0.163 99.68 0.180 . . 50 . 0.164 1257 . 'X-RAY DIFFRACTION' 20 5.797 30.359 729 0.224 98.97 0.179 . . 39 . 0.222 776 . 'X-RAY DIFFRACTION' # _struct.entry_id 3DYB _struct.title 'proteinase K- digalacturonic acid complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DYB _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;proteinase K, HEPES, digalacturonic acid, silverbullets, Structural Genomics, PSI-2, Protein Structure Initiative, Center for High-Throughput Structural Biology, CHTSB, Hydrolase, Metal-binding, Protease, Serine protease, Zymogen ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 7 ? SER A 14 ? PRO A 7 SER A 14 1 ? 8 HELX_P HELX_P2 2 HIS A 46 ? GLU A 50 ? HIS A 46 GLU A 50 5 ? 5 HELX_P HELX_P3 3 GLY A 68 ? SER A 79 ? GLY A 68 SER A 79 1 ? 12 HELX_P HELX_P4 4 GLN A 103 ? LYS A 118 ? GLN A 103 LYS A 118 1 ? 16 HELX_P HELX_P5 5 ASN A 119 ? ARG A 121 ? ASN A 119 ARG A 121 5 ? 3 HELX_P HELX_P6 6 SER A 138 ? SER A 151 ? SER A 138 SER A 151 1 ? 14 HELX_P HELX_P7 7 ASP A 165 ? ARG A 167 ? ASP A 165 ARG A 167 5 ? 3 HELX_P HELX_P8 8 GLY A 222 ? LEU A 240 ? GLY A 222 LEU A 240 1 ? 19 HELX_P HELX_P9 9 SER A 247 ? ALA A 256 ? SER A 247 ALA A 256 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 34 SG ? ? ? 1_555 A CYS 123 SG ? ? A CYS 34 A CYS 123 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf2 disulf ? ? A CYS 178 SG ? ? ? 1_555 A CYS 249 SG ? ? A CYS 178 A CYS 249 1_555 ? ? ? ? ? ? ? 2.037 ? ? covale1 covale both ? B ADA . O4 ? ? ? 1_555 B ADA . C1 ? ? B ADA 1 B ADA 2 1_555 ? ? ? ? ? ? ? 1.382 sing ? metalc1 metalc ? ? A ASN 163 O ? ? ? 1_555 D CA . CA ? ? A ASN 163 A CA 301 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc2 metalc ? ? A PRO 175 O ? ? ? 1_555 C CA . CA A ? A PRO 175 A CA 300 1_555 ? ? ? ? ? ? ? 2.548 ? ? metalc3 metalc ? ? A VAL 177 O ? ? ? 1_555 C CA . CA A ? A VAL 177 A CA 300 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc4 metalc ? ? A TYR 195 OH ? ? ? 1_555 D CA . CA ? ? A TYR 195 A CA 301 1_555 ? ? ? ? ? ? ? 2.289 ? ? metalc5 metalc ? ? A ASP 200 OD1 ? ? ? 1_555 C CA . CA A ? A ASP 200 A CA 300 1_555 ? ? ? ? ? ? ? 2.850 ? ? metalc6 metalc ? ? A ASP 200 OD2 ? ? ? 1_555 C CA . CA A ? A ASP 200 A CA 300 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc7 metalc ? ? C CA . CA A ? ? 1_555 F HOH . O A ? A CA 300 A HOH 507 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc8 metalc ? ? C CA . CA A ? ? 1_555 F HOH . O ? ? A CA 300 A HOH 594 1_555 ? ? ? ? ? ? ? 2.430 ? ? metalc9 metalc ? ? C CA . CA A ? ? 1_555 F HOH . O A ? A CA 300 A HOH 608 1_555 ? ? ? ? ? ? ? 2.289 ? ? metalc10 metalc ? ? C CA . CA A ? ? 1_555 F HOH . O ? ? A CA 300 A HOH 693 1_555 ? ? ? ? ? ? ? 2.626 ? ? metalc11 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 301 A HOH 569 1_555 ? ? ? ? ? ? ? 2.435 ? ? metalc12 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 301 A HOH 638 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc13 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 301 A HOH 650 1_555 ? ? ? ? ? ? ? 2.325 ? ? metalc14 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 301 A HOH 654 1_555 ? ? ? ? ? ? ? 2.385 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 170 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 170 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 171 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 171 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 7 ? C ? 2 ? D ? 2 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 2 ? GLN A 3 ? ALA A 2 GLN A 3 A 2 TYR A 23 ? TYR A 24 ? TYR A 23 TYR A 24 B 1 ALA A 53 ? THR A 58 ? ALA A 53 THR A 58 B 2 GLN A 89 ? LYS A 94 ? GLN A 89 LYS A 94 B 3 SER A 33 ? ASP A 39 ? SER A 33 ASP A 39 B 4 GLY A 126 ? LEU A 131 ? GLY A 126 LEU A 131 B 5 VAL A 153 ? ALA A 158 ? VAL A 153 ALA A 158 B 6 CYS A 178 ? SER A 183 ? CYS A 178 SER A 183 B 7 ILE A 201 ? PRO A 204 ? ILE A 201 PRO A 204 C 1 GLY A 135 ? GLY A 136 ? GLY A 135 GLY A 136 C 2 TYR A 169 ? SER A 170 ? TYR A 169 SER A 170 D 1 ILE A 208 ? TRP A 212 ? ILE A 208 TRP A 212 D 2 SER A 216 ? ILE A 220 ? SER A 216 ILE A 220 E 1 ASN A 257 ? LYS A 258 ? ASN A 257 LYS A 258 E 2 LEU A 271 ? LEU A 272 ? LEU A 271 LEU A 272 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 3 ? N GLN A 3 O TYR A 23 ? O TYR A 23 B 1 2 N GLN A 54 ? N GLN A 54 O GLY A 92 ? O GLY A 92 B 2 3 O GLN A 89 ? O GLN A 89 N VAL A 35 ? N VAL A 35 B 3 4 N TYR A 36 ? N TYR A 36 O SER A 130 ? O SER A 130 B 4 5 N LEU A 131 ? N LEU A 131 O ALA A 156 ? O ALA A 156 B 5 6 N VAL A 157 ? N VAL A 157 O CYS A 178 ? O CYS A 178 B 6 7 N GLY A 181 ? N GLY A 181 O GLY A 203 ? O GLY A 203 C 1 2 N GLY A 135 ? N GLY A 135 O SER A 170 ? O SER A 170 D 1 2 N ILE A 208 ? N ILE A 208 O ILE A 220 ? O ILE A 220 E 1 2 N ASN A 257 ? N ASN A 257 O LEU A 272 ? O LEU A 272 # _database_PDB_matrix.entry_id 3DYB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DYB _atom_sites.fract_transf_matrix[1][1] 0.014767 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014767 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009815 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 TRP 8 8 8 TRP TRP A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 CYS 34 34 34 CYS CYS A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 CYS 73 73 73 CYS CYS A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 GLN 89 89 89 GLN GLN A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 MET 111 111 111 MET MET A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 CYS 123 123 123 CYS CYS A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 SER 130 130 130 SER SER A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 SER 139 139 139 SER SER A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 GLN 149 149 149 GLN GLN A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 SER 151 151 151 SER SER A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 MET 154 154 154 MET MET A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 GLY 160 160 160 GLY GLY A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 ASN 168 168 168 ASN ASN A . n A 1 169 TYR 169 169 169 TYR TYR A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 SER 173 173 173 SER SER A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 ASP 184 184 184 ASP ASP A . n A 1 185 ARG 185 185 185 ARG ARG A . n A 1 186 TYR 186 186 186 TYR TYR A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 ARG 189 189 189 ARG ARG A . n A 1 190 SER 190 190 190 SER SER A . n A 1 191 SER 191 191 191 SER SER A . n A 1 192 PHE 192 192 192 PHE PHE A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 TYR 195 195 195 TYR TYR A . n A 1 196 GLY 196 196 196 GLY GLY A . n A 1 197 SER 197 197 197 SER SER A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 ASP 200 200 200 ASP ASP A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 PHE 202 202 202 PHE PHE A . n A 1 203 GLY 203 203 203 GLY GLY A . n A 1 204 PRO 204 204 204 PRO PRO A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 ASP 207 207 207 ASP ASP A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 LEU 209 209 209 LEU LEU A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 TRP 212 212 212 TRP TRP A . n A 1 213 ILE 213 213 213 ILE ILE A . n A 1 214 GLY 214 214 214 GLY GLY A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 THR 217 217 217 THR THR A . n A 1 218 ARG 218 218 218 ARG ARG A . n A 1 219 SER 219 219 219 SER SER A . n A 1 220 ILE 220 220 220 ILE ILE A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 GLY 222 222 222 GLY GLY A . n A 1 223 THR 223 223 223 THR THR A . n A 1 224 SER 224 224 224 SER SER A . n A 1 225 MET 225 225 225 MET MET A . n A 1 226 ALA 226 226 226 ALA ALA A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 PRO 228 228 228 PRO PRO A . n A 1 229 HIS 229 229 229 HIS HIS A . n A 1 230 VAL 230 230 230 VAL VAL A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 GLY 232 232 232 GLY GLY A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 ALA 235 235 235 ALA ALA A . n A 1 236 TYR 236 236 236 TYR TYR A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 MET 238 238 238 MET MET A . n A 1 239 THR 239 239 239 THR THR A . n A 1 240 LEU 240 240 240 LEU LEU A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 LYS 242 242 242 LYS LYS A . n A 1 243 THR 243 243 243 THR THR A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 ALA 245 245 245 ALA ALA A . n A 1 246 ALA 246 246 246 ALA ALA A . n A 1 247 SER 247 247 247 SER SER A . n A 1 248 ALA 248 248 248 ALA ALA A . n A 1 249 CYS 249 249 249 CYS CYS A . n A 1 250 ARG 250 250 250 ARG ARG A . n A 1 251 TYR 251 251 251 TYR TYR A . n A 1 252 ILE 252 252 252 ILE ILE A . n A 1 253 ALA 253 253 253 ALA ALA A . n A 1 254 ASP 254 254 254 ASP ASP A . n A 1 255 THR 255 255 255 THR THR A . n A 1 256 ALA 256 256 256 ALA ALA A . n A 1 257 ASN 257 257 257 ASN ASN A . n A 1 258 LYS 258 258 258 LYS LYS A . n A 1 259 GLY 259 259 259 GLY GLY A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 SER 262 262 262 SER SER A . n A 1 263 ASN 263 263 263 ASN ASN A . n A 1 264 ILE 264 264 264 ILE ILE A . n A 1 265 PRO 265 265 265 PRO PRO A . n A 1 266 PHE 266 266 266 PHE PHE A . n A 1 267 GLY 267 267 267 GLY GLY A . n A 1 268 THR 268 268 268 THR THR A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 ASN 270 270 270 ASN ASN A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 LEU 272 272 272 LEU LEU A . n A 1 273 ALA 273 273 273 ALA ALA A . n A 1 274 TYR 274 274 274 TYR TYR A . n A 1 275 ASN 275 275 275 ASN ASN A . n A 1 276 ASN 276 276 276 ASN ASN A . n A 1 277 TYR 277 277 277 TYR TYR A . n A 1 278 GLN 278 278 278 GLN GLN A . n A 1 279 ALA 279 279 279 ALA ALA A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Center for High-Throughput Structural Biology' _pdbx_SG_project.initial_of_center CHTSB # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA 1 300 300 CA CA A . D 3 CA 1 301 301 CA CA A . E 4 EPE 1 400 400 EPE EPE A . F 5 HOH 1 501 501 HOH HOH A . F 5 HOH 2 502 502 HOH HOH A . F 5 HOH 3 503 503 HOH HOH A . F 5 HOH 4 504 504 HOH HOH A . F 5 HOH 5 505 505 HOH HOH A . F 5 HOH 6 506 506 HOH HOH A . F 5 HOH 7 507 507 HOH HOH A . F 5 HOH 8 508 508 HOH HOH A . F 5 HOH 9 509 509 HOH HOH A . F 5 HOH 10 510 510 HOH HOH A . F 5 HOH 11 511 511 HOH HOH A . F 5 HOH 12 512 512 HOH HOH A . F 5 HOH 13 513 513 HOH HOH A . F 5 HOH 14 514 514 HOH HOH A . F 5 HOH 15 515 515 HOH HOH A . F 5 HOH 16 516 516 HOH HOH A . F 5 HOH 17 517 517 HOH HOH A . F 5 HOH 18 518 518 HOH HOH A . F 5 HOH 19 519 519 HOH HOH A . F 5 HOH 20 520 520 HOH HOH A . F 5 HOH 21 521 521 HOH HOH A . F 5 HOH 22 522 522 HOH HOH A . F 5 HOH 23 523 523 HOH HOH A . F 5 HOH 24 524 524 HOH HOH A . F 5 HOH 25 525 525 HOH HOH A . F 5 HOH 26 526 526 HOH HOH A . F 5 HOH 27 527 527 HOH HOH A . F 5 HOH 28 528 528 HOH HOH A . F 5 HOH 29 529 529 HOH HOH A . F 5 HOH 30 530 530 HOH HOH A . F 5 HOH 31 531 531 HOH HOH A . F 5 HOH 32 532 532 HOH HOH A . F 5 HOH 33 533 533 HOH HOH A . F 5 HOH 34 534 534 HOH HOH A . F 5 HOH 35 535 535 HOH HOH A . F 5 HOH 36 536 536 HOH HOH A . F 5 HOH 37 537 537 HOH HOH A . F 5 HOH 38 538 538 HOH HOH A . F 5 HOH 39 539 539 HOH HOH A . F 5 HOH 40 540 540 HOH HOH A . F 5 HOH 41 541 541 HOH HOH A . F 5 HOH 42 542 542 HOH HOH A . F 5 HOH 43 543 543 HOH HOH A . F 5 HOH 44 544 544 HOH HOH A . F 5 HOH 45 545 545 HOH HOH A . F 5 HOH 46 546 546 HOH HOH A . F 5 HOH 47 547 547 HOH HOH A . F 5 HOH 48 548 548 HOH HOH A . F 5 HOH 49 549 549 HOH HOH A . F 5 HOH 50 550 550 HOH HOH A . F 5 HOH 51 551 551 HOH HOH A . F 5 HOH 52 552 552 HOH HOH A . F 5 HOH 53 553 553 HOH HOH A . F 5 HOH 54 554 554 HOH HOH A . F 5 HOH 55 555 555 HOH HOH A . F 5 HOH 56 556 556 HOH HOH A . F 5 HOH 57 557 557 HOH HOH A . F 5 HOH 58 558 558 HOH HOH A . F 5 HOH 59 559 559 HOH HOH A . F 5 HOH 60 560 560 HOH HOH A . F 5 HOH 61 561 561 HOH HOH A . F 5 HOH 62 562 562 HOH HOH A . F 5 HOH 63 563 563 HOH HOH A . F 5 HOH 64 564 564 HOH HOH A . F 5 HOH 65 565 565 HOH HOH A . F 5 HOH 66 566 566 HOH HOH A . F 5 HOH 67 567 567 HOH HOH A . F 5 HOH 68 568 568 HOH HOH A . F 5 HOH 69 569 569 HOH HOH A . F 5 HOH 70 570 570 HOH HOH A . F 5 HOH 71 571 571 HOH HOH A . F 5 HOH 72 572 572 HOH HOH A . F 5 HOH 73 573 573 HOH HOH A . F 5 HOH 74 574 574 HOH HOH A . F 5 HOH 75 575 575 HOH HOH A . F 5 HOH 76 576 576 HOH HOH A . F 5 HOH 77 577 577 HOH HOH A . F 5 HOH 78 578 578 HOH HOH A . F 5 HOH 79 579 579 HOH HOH A . F 5 HOH 80 580 580 HOH HOH A . F 5 HOH 81 581 581 HOH HOH A . F 5 HOH 82 582 582 HOH HOH A . F 5 HOH 83 583 583 HOH HOH A . F 5 HOH 84 584 584 HOH HOH A . F 5 HOH 85 585 585 HOH HOH A . F 5 HOH 86 586 586 HOH HOH A . F 5 HOH 87 587 587 HOH HOH A . F 5 HOH 88 588 588 HOH HOH A . F 5 HOH 89 589 589 HOH HOH A . F 5 HOH 90 590 590 HOH HOH A . F 5 HOH 91 591 591 HOH HOH A . F 5 HOH 92 592 592 HOH HOH A . F 5 HOH 93 593 593 HOH HOH A . F 5 HOH 94 594 594 HOH HOH A . F 5 HOH 95 595 595 HOH HOH A . F 5 HOH 96 596 596 HOH HOH A . F 5 HOH 97 597 597 HOH HOH A . F 5 HOH 98 598 598 HOH HOH A . F 5 HOH 99 599 599 HOH HOH A . F 5 HOH 100 600 600 HOH HOH A . F 5 HOH 101 601 601 HOH HOH A . F 5 HOH 102 602 602 HOH HOH A . F 5 HOH 103 603 603 HOH HOH A . F 5 HOH 104 604 604 HOH HOH A . F 5 HOH 105 605 605 HOH HOH A . F 5 HOH 106 606 606 HOH HOH A . F 5 HOH 107 607 607 HOH HOH A . F 5 HOH 108 608 608 HOH HOH A . F 5 HOH 109 609 609 HOH HOH A . F 5 HOH 110 610 610 HOH HOH A . F 5 HOH 111 611 611 HOH HOH A . F 5 HOH 112 612 612 HOH HOH A . F 5 HOH 113 613 613 HOH HOH A . F 5 HOH 114 614 614 HOH HOH A . F 5 HOH 115 615 615 HOH HOH A . F 5 HOH 116 616 616 HOH HOH A . F 5 HOH 117 617 617 HOH HOH A . F 5 HOH 118 618 618 HOH HOH A . F 5 HOH 119 619 619 HOH HOH A . F 5 HOH 120 620 620 HOH HOH A . F 5 HOH 121 621 621 HOH HOH A . F 5 HOH 122 622 622 HOH HOH A . F 5 HOH 123 623 623 HOH HOH A . F 5 HOH 124 624 624 HOH HOH A . F 5 HOH 125 625 625 HOH HOH A . F 5 HOH 126 626 626 HOH HOH A . F 5 HOH 127 627 627 HOH HOH A . F 5 HOH 128 628 628 HOH HOH A . F 5 HOH 129 629 629 HOH HOH A . F 5 HOH 130 630 630 HOH HOH A . F 5 HOH 131 631 631 HOH HOH A . F 5 HOH 132 632 632 HOH HOH A . F 5 HOH 133 633 633 HOH HOH A . F 5 HOH 134 634 634 HOH HOH A . F 5 HOH 135 635 635 HOH HOH A . F 5 HOH 136 636 636 HOH HOH A . F 5 HOH 137 637 637 HOH HOH A . F 5 HOH 138 638 638 HOH HOH A . F 5 HOH 139 639 639 HOH HOH A . F 5 HOH 140 640 640 HOH HOH A . F 5 HOH 141 641 641 HOH HOH A . F 5 HOH 142 642 642 HOH HOH A . F 5 HOH 143 643 643 HOH HOH A . F 5 HOH 144 644 644 HOH HOH A . F 5 HOH 145 645 645 HOH HOH A . F 5 HOH 146 646 646 HOH HOH A . F 5 HOH 147 647 647 HOH HOH A . F 5 HOH 148 648 648 HOH HOH A . F 5 HOH 149 649 649 HOH HOH A . F 5 HOH 150 650 650 HOH HOH A . F 5 HOH 151 651 651 HOH HOH A . F 5 HOH 152 652 652 HOH HOH A . F 5 HOH 153 653 653 HOH HOH A . F 5 HOH 154 654 654 HOH HOH A . F 5 HOH 155 655 655 HOH HOH A . F 5 HOH 156 656 656 HOH HOH A . F 5 HOH 157 657 657 HOH HOH A . F 5 HOH 158 658 658 HOH HOH A . F 5 HOH 159 659 659 HOH HOH A . F 5 HOH 160 660 660 HOH HOH A . F 5 HOH 161 661 661 HOH HOH A . F 5 HOH 162 662 662 HOH HOH A . F 5 HOH 163 663 663 HOH HOH A . F 5 HOH 164 664 664 HOH HOH A . F 5 HOH 165 665 665 HOH HOH A . F 5 HOH 166 666 666 HOH HOH A . F 5 HOH 167 667 667 HOH HOH A . F 5 HOH 168 668 668 HOH HOH A . F 5 HOH 169 669 669 HOH HOH A . F 5 HOH 170 670 670 HOH HOH A . F 5 HOH 171 671 671 HOH HOH A . F 5 HOH 172 672 672 HOH HOH A . F 5 HOH 173 673 673 HOH HOH A . F 5 HOH 174 674 674 HOH HOH A . F 5 HOH 175 675 675 HOH HOH A . F 5 HOH 176 676 676 HOH HOH A . F 5 HOH 177 677 677 HOH HOH A . F 5 HOH 178 678 678 HOH HOH A . F 5 HOH 179 679 679 HOH HOH A . F 5 HOH 180 680 680 HOH HOH A . F 5 HOH 181 681 681 HOH HOH A . F 5 HOH 182 682 682 HOH HOH A . F 5 HOH 183 683 683 HOH HOH A . F 5 HOH 184 684 684 HOH HOH A . F 5 HOH 185 685 685 HOH HOH A . F 5 HOH 186 686 686 HOH HOH A . F 5 HOH 187 687 687 HOH HOH A . F 5 HOH 188 688 688 HOH HOH A . F 5 HOH 189 689 689 HOH HOH A . F 5 HOH 190 690 690 HOH HOH A . F 5 HOH 191 691 691 HOH HOH A . F 5 HOH 192 692 692 HOH HOH A . F 5 HOH 193 693 693 HOH HOH A . F 5 HOH 194 694 694 HOH HOH A . F 5 HOH 195 695 695 HOH HOH A . F 5 HOH 196 696 696 HOH HOH A . F 5 HOH 197 697 697 HOH HOH A . F 5 HOH 198 698 698 HOH HOH A . F 5 HOH 199 699 699 HOH HOH A . F 5 HOH 200 700 700 HOH HOH A . F 5 HOH 201 701 701 HOH HOH A . F 5 HOH 202 702 702 HOH HOH A . F 5 HOH 203 703 703 HOH HOH A . F 5 HOH 204 704 704 HOH HOH A . F 5 HOH 205 705 705 HOH HOH A . F 5 HOH 206 706 706 HOH HOH A . F 5 HOH 207 707 707 HOH HOH A . F 5 HOH 208 708 708 HOH HOH A . F 5 HOH 209 709 709 HOH HOH A . F 5 HOH 210 710 710 HOH HOH A . F 5 HOH 211 711 711 HOH HOH A . F 5 HOH 212 712 712 HOH HOH A . F 5 HOH 213 713 713 HOH HOH A . F 5 HOH 214 714 714 HOH HOH A . F 5 HOH 215 715 715 HOH HOH A . F 5 HOH 216 716 716 HOH HOH A . F 5 HOH 217 717 717 HOH HOH A . F 5 HOH 218 718 718 HOH HOH A . F 5 HOH 219 719 719 HOH HOH A . F 5 HOH 220 720 720 HOH HOH A . F 5 HOH 221 721 721 HOH HOH A . F 5 HOH 222 722 722 HOH HOH A . F 5 HOH 223 723 723 HOH HOH A . F 5 HOH 224 724 724 HOH HOH A . F 5 HOH 225 725 725 HOH HOH A . F 5 HOH 226 726 726 HOH HOH A . F 5 HOH 227 727 727 HOH HOH A . F 5 HOH 228 728 728 HOH HOH A . F 5 HOH 229 729 729 HOH HOH A . F 5 HOH 230 730 730 HOH HOH A . F 5 HOH 231 731 731 HOH HOH A . F 5 HOH 232 732 732 HOH HOH A . F 5 HOH 233 733 733 HOH HOH A . F 5 HOH 234 734 734 HOH HOH A . F 5 HOH 235 735 735 HOH HOH A . F 5 HOH 236 736 736 HOH HOH A . F 5 HOH 237 737 737 HOH HOH A . F 5 HOH 238 738 738 HOH HOH A . F 5 HOH 239 739 739 HOH HOH A . F 5 HOH 240 740 740 HOH HOH A . F 5 HOH 241 741 741 HOH HOH A . F 5 HOH 242 742 742 HOH HOH A . F 5 HOH 243 743 743 HOH HOH A . F 5 HOH 244 744 744 HOH HOH A . F 5 HOH 245 745 745 HOH HOH A . F 5 HOH 246 746 746 HOH HOH A . F 5 HOH 247 747 747 HOH HOH A . F 5 HOH 248 748 748 HOH HOH A . F 5 HOH 249 749 749 HOH HOH A . F 5 HOH 250 750 750 HOH HOH A . F 5 HOH 251 751 751 HOH HOH A . F 5 HOH 252 752 752 HOH HOH A . F 5 HOH 253 753 753 HOH HOH A . F 5 HOH 254 754 754 HOH HOH A . F 5 HOH 255 755 755 HOH HOH A . F 5 HOH 256 756 756 HOH HOH A . F 5 HOH 257 757 757 HOH HOH A . F 5 HOH 258 758 758 HOH HOH A . F 5 HOH 259 759 759 HOH HOH A . F 5 HOH 260 760 760 HOH HOH A . F 5 HOH 261 761 761 HOH HOH A . F 5 HOH 262 762 762 HOH HOH A . F 5 HOH 263 763 763 HOH HOH A . F 5 HOH 264 764 764 HOH HOH A . F 5 HOH 265 765 765 HOH HOH A . F 5 HOH 266 766 766 HOH HOH A . F 5 HOH 267 767 767 HOH HOH A . F 5 HOH 268 768 768 HOH HOH A . F 5 HOH 269 769 769 HOH HOH A . F 5 HOH 270 770 770 HOH HOH A . F 5 HOH 271 771 771 HOH HOH A . F 5 HOH 272 772 772 HOH HOH A . F 5 HOH 273 773 773 HOH HOH A . F 5 HOH 274 774 774 HOH HOH A . F 5 HOH 275 775 775 HOH HOH A . F 5 HOH 276 776 776 HOH HOH A . F 5 HOH 277 777 777 HOH HOH A . F 5 HOH 278 778 778 HOH HOH A . F 5 HOH 279 779 779 HOH HOH A . F 5 HOH 280 780 780 HOH HOH A . F 5 HOH 281 781 781 HOH HOH A . F 5 HOH 282 782 782 HOH HOH A . F 5 HOH 283 783 783 HOH HOH A . F 5 HOH 284 784 784 HOH HOH A . F 5 HOH 285 785 785 HOH HOH A . F 5 HOH 286 786 786 HOH HOH A . F 5 HOH 287 787 787 HOH HOH A . F 5 HOH 288 788 788 HOH HOH A . F 5 HOH 289 789 789 HOH HOH A . F 5 HOH 290 790 790 HOH HOH A . F 5 HOH 291 791 791 HOH HOH A . F 5 HOH 292 792 792 HOH HOH A . F 5 HOH 293 793 793 HOH HOH A . F 5 HOH 294 794 794 HOH HOH A . F 5 HOH 295 795 795 HOH HOH A . F 5 HOH 296 796 796 HOH HOH A . F 5 HOH 297 797 797 HOH HOH A . F 5 HOH 298 798 798 HOH HOH A . F 5 HOH 299 799 799 HOH HOH A . F 5 HOH 300 800 800 HOH HOH A . F 5 HOH 301 801 801 HOH HOH A . F 5 HOH 302 802 802 HOH HOH A . F 5 HOH 303 803 803 HOH HOH A . F 5 HOH 304 804 804 HOH HOH A . F 5 HOH 305 805 805 HOH HOH A . F 5 HOH 306 806 806 HOH HOH A . F 5 HOH 307 807 807 HOH HOH A . F 5 HOH 308 808 808 HOH HOH A . F 5 HOH 309 809 809 HOH HOH A . F 5 HOH 310 810 810 HOH HOH A . F 5 HOH 311 811 811 HOH HOH A . F 5 HOH 312 812 812 HOH HOH A . F 5 HOH 313 813 813 HOH HOH A . F 5 HOH 314 814 814 HOH HOH A . F 5 HOH 315 815 815 HOH HOH A . F 5 HOH 316 816 816 HOH HOH A . F 5 HOH 317 817 817 HOH HOH A . F 5 HOH 318 818 818 HOH HOH A . F 5 HOH 319 819 819 HOH HOH A . F 5 HOH 320 820 820 HOH HOH A . F 5 HOH 321 821 821 HOH HOH A . F 5 HOH 322 822 822 HOH HOH A . F 5 HOH 323 823 823 HOH HOH A . F 5 HOH 324 824 824 HOH HOH A . F 5 HOH 325 825 825 HOH HOH A . F 5 HOH 326 826 826 HOH HOH A . F 5 HOH 327 827 827 HOH HOH A . F 5 HOH 328 828 828 HOH HOH A . F 5 HOH 329 829 829 HOH HOH A . F 5 HOH 330 830 830 HOH HOH A . F 5 HOH 331 831 831 HOH HOH A . F 5 HOH 332 832 832 HOH HOH A . F 5 HOH 333 833 833 HOH HOH A . F 5 HOH 334 834 834 HOH HOH A . F 5 HOH 335 835 835 HOH HOH A . F 5 HOH 336 836 836 HOH HOH A . F 5 HOH 337 837 837 HOH HOH A . F 5 HOH 338 838 838 HOH HOH A . F 5 HOH 339 839 839 HOH HOH A . F 5 HOH 340 840 840 HOH HOH A . F 5 HOH 341 841 841 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 841 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASN 163 ? A ASN 163 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 OH ? A TYR 195 ? A TYR 195 ? 1_555 100.5 ? 2 O ? A ASN 163 ? A ASN 163 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 569 ? 1_555 93.1 ? 3 OH ? A TYR 195 ? A TYR 195 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 569 ? 1_555 89.7 ? 4 O ? A ASN 163 ? A ASN 163 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 638 ? 1_555 90.1 ? 5 OH ? A TYR 195 ? A TYR 195 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 638 ? 1_555 88.1 ? 6 O ? F HOH . ? A HOH 569 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 638 ? 1_555 176.4 ? 7 O ? A ASN 163 ? A ASN 163 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 650 ? 1_555 170.7 ? 8 OH ? A TYR 195 ? A TYR 195 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 650 ? 1_555 84.4 ? 9 O ? F HOH . ? A HOH 569 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 650 ? 1_555 78.9 ? 10 O ? F HOH . ? A HOH 638 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 650 ? 1_555 98.1 ? 11 O ? A ASN 163 ? A ASN 163 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 654 ? 1_555 89.8 ? 12 OH ? A TYR 195 ? A TYR 195 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 654 ? 1_555 167.4 ? 13 O ? F HOH . ? A HOH 569 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 654 ? 1_555 82.6 ? 14 O ? F HOH . ? A HOH 638 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 654 ? 1_555 99.1 ? 15 O ? F HOH . ? A HOH 650 ? 1_555 CA ? D CA . ? A CA 301 ? 1_555 O ? F HOH . ? A HOH 654 ? 1_555 84.4 ? 16 O ? A PRO 175 ? A PRO 175 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? A VAL 177 ? A VAL 177 ? 1_555 91.9 ? 17 O ? A PRO 175 ? A PRO 175 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 143.1 ? 18 O ? A VAL 177 ? A VAL 177 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 123.2 ? 19 O ? A PRO 175 ? A PRO 175 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 166.2 ? 20 O ? A VAL 177 ? A VAL 177 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 79.9 ? 21 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 48.5 ? 22 O ? A PRO 175 ? A PRO 175 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 507 ? 1_555 103.3 ? 23 O ? A VAL 177 ? A VAL 177 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 507 ? 1_555 76.4 ? 24 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 507 ? 1_555 96.3 ? 25 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 507 ? 1_555 64.2 ? 26 O ? A PRO 175 ? A PRO 175 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 594 ? 1_555 86.0 ? 27 O ? A VAL 177 ? A VAL 177 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 594 ? 1_555 142.3 ? 28 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 594 ? 1_555 73.0 ? 29 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 594 ? 1_555 93.7 ? 30 O A F HOH . ? A HOH 507 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 594 ? 1_555 67.6 ? 31 O ? A PRO 175 ? A PRO 175 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 608 ? 1_555 82.6 ? 32 O ? A VAL 177 ? A VAL 177 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 608 ? 1_555 83.9 ? 33 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 608 ? 1_555 89.7 ? 34 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 608 ? 1_555 107.2 ? 35 O A F HOH . ? A HOH 507 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 608 ? 1_555 159.6 ? 36 O ? F HOH . ? A HOH 594 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O A F HOH . ? A HOH 608 ? 1_555 132.8 ? 37 O ? A PRO 175 ? A PRO 175 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 693 ? 1_555 58.0 ? 38 O ? A VAL 177 ? A VAL 177 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 693 ? 1_555 138.9 ? 39 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 693 ? 1_555 85.9 ? 40 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 693 ? 1_555 134.4 ? 41 O A F HOH . ? A HOH 507 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 693 ? 1_555 133.3 ? 42 O ? F HOH . ? A HOH 594 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 693 ? 1_555 68.7 ? 43 O A F HOH . ? A HOH 608 ? 1_555 CA A C CA . ? A CA 300 ? 1_555 O ? F HOH . ? A HOH 693 ? 1_555 66.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2021-11-17 6 'Structure model' 2 2 2023-08-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' Advisory 6 4 'Structure model' 'Atomic model' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Non-polymer description' 10 4 'Structure model' 'Structure summary' 11 5 'Structure model' Advisory 12 5 'Structure model' 'Database references' 13 5 'Structure model' 'Structure summary' 14 6 'Structure model' 'Data collection' 15 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 3 'Structure model' software 3 4 'Structure model' atom_site 4 4 'Structure model' atom_site_anisotrop 5 4 'Structure model' chem_comp 6 4 'Structure model' entity 7 4 'Structure model' pdbx_branch_scheme 8 4 'Structure model' pdbx_chem_comp_identifier 9 4 'Structure model' pdbx_entity_branch 10 4 'Structure model' pdbx_entity_branch_descriptor 11 4 'Structure model' pdbx_entity_branch_link 12 4 'Structure model' pdbx_entity_branch_list 13 4 'Structure model' pdbx_entity_nonpoly 14 4 'Structure model' pdbx_nonpoly_scheme 15 4 'Structure model' pdbx_struct_conn_angle 16 4 'Structure model' pdbx_validate_symm_contact 17 4 'Structure model' struct_conn 18 4 'Structure model' struct_conn_type 19 4 'Structure model' struct_site 20 4 'Structure model' struct_site_gen 21 5 'Structure model' chem_comp 22 5 'Structure model' database_2 23 5 'Structure model' pdbx_unobs_or_zero_occ_residues 24 5 'Structure model' struct_keywords 25 6 'Structure model' chem_comp_atom 26 6 'Structure model' chem_comp_bond 27 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_atom_id' 10 4 'Structure model' '_atom_site.label_comp_id' 11 4 'Structure model' '_atom_site.occupancy' 12 4 'Structure model' '_atom_site.type_symbol' 13 4 'Structure model' '_atom_site_anisotrop.id' 14 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 15 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 16 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 17 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 18 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 19 4 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 20 4 'Structure model' '_chem_comp.formula' 21 4 'Structure model' '_chem_comp.formula_weight' 22 4 'Structure model' '_chem_comp.id' 23 4 'Structure model' '_chem_comp.name' 24 4 'Structure model' '_chem_comp.pdbx_synonyms' 25 4 'Structure model' '_chem_comp.type' 26 4 'Structure model' '_entity.formula_weight' 27 4 'Structure model' '_entity.pdbx_description' 28 4 'Structure model' '_entity.src_method' 29 4 'Structure model' '_entity.type' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 34 4 'Structure model' '_pdbx_struct_conn_angle.value' 35 4 'Structure model' '_pdbx_validate_symm_contact.auth_asym_id_1' 36 4 'Structure model' '_pdbx_validate_symm_contact.auth_asym_id_2' 37 4 'Structure model' '_pdbx_validate_symm_contact.auth_atom_id_1' 38 4 'Structure model' '_pdbx_validate_symm_contact.auth_atom_id_2' 39 4 'Structure model' '_pdbx_validate_symm_contact.auth_comp_id_1' 40 4 'Structure model' '_pdbx_validate_symm_contact.auth_comp_id_2' 41 4 'Structure model' '_pdbx_validate_symm_contact.auth_seq_id_1' 42 4 'Structure model' '_pdbx_validate_symm_contact.auth_seq_id_2' 43 5 'Structure model' '_chem_comp.pdbx_synonyms' 44 5 'Structure model' '_database_2.pdbx_DOI' 45 5 'Structure model' '_database_2.pdbx_database_accession' 46 5 'Structure model' '_struct_keywords.text' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0069 ? 1 d*TREK 'data reduction' . ? 2 d*TREK 'data scaling' . ? 3 # _pdbx_entry_details.entry_id 3DYB _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;AUTHORS STATE THAT ACCORDING TO THE ELECTRON DENSITY MAPS, RESIDUE 207 SHOULD BE AN ASP. THIS IS CONSISTENT WITH THE OBSERVATIONS FOUND IN PDB ENTRIES 1IC6, 1P7V AND 2PWA. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O5 B ADA 2 ? ? 1_555 O A HOH 656 ? ? 7_465 0.80 2 1 C5 B ADA 2 ? ? 1_555 O A HOH 656 ? ? 7_465 1.03 3 1 O6B B ADA 2 ? ? 1_555 O A HOH 637 ? ? 7_465 1.15 4 1 C6 B ADA 2 ? ? 1_555 O A HOH 637 ? ? 7_465 1.25 5 1 C1 B ADA 2 ? ? 1_555 O A HOH 656 ? ? 7_465 1.36 6 1 O6A B ADA 2 ? ? 1_555 O A HOH 637 ? ? 7_465 1.50 7 1 O3 B ADA 2 ? ? 1_555 O A HOH 639 ? ? 7_465 1.66 8 1 C4 B ADA 2 ? ? 1_555 O A HOH 656 ? ? 7_465 1.74 9 1 O6B B ADA 2 ? ? 1_555 O A HOH 639 ? ? 7_465 1.84 10 1 O5 B ADA 2 ? ? 1_555 O A HOH 668 ? ? 7_465 1.89 11 1 OG A SER 176 ? ? 1_555 O6A B ADA 2 ? ? 7_465 1.96 12 1 C2 B ADA 2 ? ? 1_555 O A HOH 656 ? ? 7_465 1.97 13 1 C6 B ADA 2 ? ? 1_555 O A HOH 656 ? ? 7_465 2.00 14 1 C3 B ADA 2 ? ? 1_555 O A HOH 656 ? ? 7_465 2.12 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 39 ? ? -166.85 -142.59 2 1 ASP A 207 ? ? 61.37 61.30 3 1 ASN A 270 ? ? -108.57 74.07 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag N _pdbx_unobs_or_zero_occ_residues.occupancy_flag 0 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id ADA _pdbx_unobs_or_zero_occ_residues.auth_seq_id 2 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id ADA _pdbx_unobs_or_zero_occ_residues.label_seq_id ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADA C1 C N S 1 ADA C2 C N R 2 ADA C3 C N S 3 ADA C4 C N R 4 ADA C5 C N S 5 ADA C6 C N N 6 ADA O1 O N N 7 ADA O2 O N N 8 ADA O3 O N N 9 ADA O4 O N N 10 ADA O5 O N N 11 ADA O6B O N N 12 ADA O6A O N N 13 ADA H1 H N N 14 ADA H2 H N N 15 ADA H3 H N N 16 ADA H4 H N N 17 ADA H5 H N N 18 ADA HO1 H N N 19 ADA HO2 H N N 20 ADA HO3 H N N 21 ADA HO4 H N N 22 ADA HO6B H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ARG N N N N 37 ARG CA C N S 38 ARG C C N N 39 ARG O O N N 40 ARG CB C N N 41 ARG CG C N N 42 ARG CD C N N 43 ARG NE N N N 44 ARG CZ C N N 45 ARG NH1 N N N 46 ARG NH2 N N N 47 ARG OXT O N N 48 ARG H H N N 49 ARG H2 H N N 50 ARG HA H N N 51 ARG HB2 H N N 52 ARG HB3 H N N 53 ARG HG2 H N N 54 ARG HG3 H N N 55 ARG HD2 H N N 56 ARG HD3 H N N 57 ARG HE H N N 58 ARG HH11 H N N 59 ARG HH12 H N N 60 ARG HH21 H N N 61 ARG HH22 H N N 62 ARG HXT H N N 63 ASN N N N N 64 ASN CA C N S 65 ASN C C N N 66 ASN O O N N 67 ASN CB C N N 68 ASN CG C N N 69 ASN OD1 O N N 70 ASN ND2 N N N 71 ASN OXT O N N 72 ASN H H N N 73 ASN H2 H N N 74 ASN HA H N N 75 ASN HB2 H N N 76 ASN HB3 H N N 77 ASN HD21 H N N 78 ASN HD22 H N N 79 ASN HXT H N N 80 ASP N N N N 81 ASP CA C N S 82 ASP C C N N 83 ASP O O N N 84 ASP CB C N N 85 ASP CG C N N 86 ASP OD1 O N N 87 ASP OD2 O N N 88 ASP OXT O N N 89 ASP H H N N 90 ASP H2 H N N 91 ASP HA H N N 92 ASP HB2 H N N 93 ASP HB3 H N N 94 ASP HD2 H N N 95 ASP HXT H N N 96 CA CA CA N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 EPE N1 N N N 112 EPE C2 C N N 113 EPE C3 C N N 114 EPE N4 N N N 115 EPE C5 C N N 116 EPE C6 C N N 117 EPE C7 C N N 118 EPE C8 C N N 119 EPE O8 O N N 120 EPE C9 C N N 121 EPE C10 C N N 122 EPE S S N N 123 EPE O1S O N N 124 EPE O2S O N N 125 EPE O3S O N N 126 EPE H21 H N N 127 EPE H22 H N N 128 EPE H31 H N N 129 EPE H32 H N N 130 EPE H51 H N N 131 EPE H52 H N N 132 EPE H61 H N N 133 EPE H62 H N N 134 EPE H71 H N N 135 EPE H72 H N N 136 EPE H81 H N N 137 EPE H82 H N N 138 EPE HO8 H N N 139 EPE H91 H N N 140 EPE H92 H N N 141 EPE H101 H N N 142 EPE H102 H N N 143 EPE HOS3 H N N 144 GLN N N N N 145 GLN CA C N S 146 GLN C C N N 147 GLN O O N N 148 GLN CB C N N 149 GLN CG C N N 150 GLN CD C N N 151 GLN OE1 O N N 152 GLN NE2 N N N 153 GLN OXT O N N 154 GLN H H N N 155 GLN H2 H N N 156 GLN HA H N N 157 GLN HB2 H N N 158 GLN HB3 H N N 159 GLN HG2 H N N 160 GLN HG3 H N N 161 GLN HE21 H N N 162 GLN HE22 H N N 163 GLN HXT H N N 164 GLU N N N N 165 GLU CA C N S 166 GLU C C N N 167 GLU O O N N 168 GLU CB C N N 169 GLU CG C N N 170 GLU CD C N N 171 GLU OE1 O N N 172 GLU OE2 O N N 173 GLU OXT O N N 174 GLU H H N N 175 GLU H2 H N N 176 GLU HA H N N 177 GLU HB2 H N N 178 GLU HB3 H N N 179 GLU HG2 H N N 180 GLU HG3 H N N 181 GLU HE2 H N N 182 GLU HXT H N N 183 GLY N N N N 184 GLY CA C N N 185 GLY C C N N 186 GLY O O N N 187 GLY OXT O N N 188 GLY H H N N 189 GLY H2 H N N 190 GLY HA2 H N N 191 GLY HA3 H N N 192 GLY HXT H N N 193 HIS N N N N 194 HIS CA C N S 195 HIS C C N N 196 HIS O O N N 197 HIS CB C N N 198 HIS CG C Y N 199 HIS ND1 N Y N 200 HIS CD2 C Y N 201 HIS CE1 C Y N 202 HIS NE2 N Y N 203 HIS OXT O N N 204 HIS H H N N 205 HIS H2 H N N 206 HIS HA H N N 207 HIS HB2 H N N 208 HIS HB3 H N N 209 HIS HD1 H N N 210 HIS HD2 H N N 211 HIS HE1 H N N 212 HIS HE2 H N N 213 HIS HXT H N N 214 HOH O O N N 215 HOH H1 H N N 216 HOH H2 H N N 217 ILE N N N N 218 ILE CA C N S 219 ILE C C N N 220 ILE O O N N 221 ILE CB C N S 222 ILE CG1 C N N 223 ILE CG2 C N N 224 ILE CD1 C N N 225 ILE OXT O N N 226 ILE H H N N 227 ILE H2 H N N 228 ILE HA H N N 229 ILE HB H N N 230 ILE HG12 H N N 231 ILE HG13 H N N 232 ILE HG21 H N N 233 ILE HG22 H N N 234 ILE HG23 H N N 235 ILE HD11 H N N 236 ILE HD12 H N N 237 ILE HD13 H N N 238 ILE HXT H N N 239 LEU N N N N 240 LEU CA C N S 241 LEU C C N N 242 LEU O O N N 243 LEU CB C N N 244 LEU CG C N N 245 LEU CD1 C N N 246 LEU CD2 C N N 247 LEU OXT O N N 248 LEU H H N N 249 LEU H2 H N N 250 LEU HA H N N 251 LEU HB2 H N N 252 LEU HB3 H N N 253 LEU HG H N N 254 LEU HD11 H N N 255 LEU HD12 H N N 256 LEU HD13 H N N 257 LEU HD21 H N N 258 LEU HD22 H N N 259 LEU HD23 H N N 260 LEU HXT H N N 261 LYS N N N N 262 LYS CA C N S 263 LYS C C N N 264 LYS O O N N 265 LYS CB C N N 266 LYS CG C N N 267 LYS CD C N N 268 LYS CE C N N 269 LYS NZ N N N 270 LYS OXT O N N 271 LYS H H N N 272 LYS H2 H N N 273 LYS HA H N N 274 LYS HB2 H N N 275 LYS HB3 H N N 276 LYS HG2 H N N 277 LYS HG3 H N N 278 LYS HD2 H N N 279 LYS HD3 H N N 280 LYS HE2 H N N 281 LYS HE3 H N N 282 LYS HZ1 H N N 283 LYS HZ2 H N N 284 LYS HZ3 H N N 285 LYS HXT H N N 286 MET N N N N 287 MET CA C N S 288 MET C C N N 289 MET O O N N 290 MET CB C N N 291 MET CG C N N 292 MET SD S N N 293 MET CE C N N 294 MET OXT O N N 295 MET H H N N 296 MET H2 H N N 297 MET HA H N N 298 MET HB2 H N N 299 MET HB3 H N N 300 MET HG2 H N N 301 MET HG3 H N N 302 MET HE1 H N N 303 MET HE2 H N N 304 MET HE3 H N N 305 MET HXT H N N 306 PHE N N N N 307 PHE CA C N S 308 PHE C C N N 309 PHE O O N N 310 PHE CB C N N 311 PHE CG C Y N 312 PHE CD1 C Y N 313 PHE CD2 C Y N 314 PHE CE1 C Y N 315 PHE CE2 C Y N 316 PHE CZ C Y N 317 PHE OXT O N N 318 PHE H H N N 319 PHE H2 H N N 320 PHE HA H N N 321 PHE HB2 H N N 322 PHE HB3 H N N 323 PHE HD1 H N N 324 PHE HD2 H N N 325 PHE HE1 H N N 326 PHE HE2 H N N 327 PHE HZ H N N 328 PHE HXT H N N 329 PRO N N N N 330 PRO CA C N S 331 PRO C C N N 332 PRO O O N N 333 PRO CB C N N 334 PRO CG C N N 335 PRO CD C N N 336 PRO OXT O N N 337 PRO H H N N 338 PRO HA H N N 339 PRO HB2 H N N 340 PRO HB3 H N N 341 PRO HG2 H N N 342 PRO HG3 H N N 343 PRO HD2 H N N 344 PRO HD3 H N N 345 PRO HXT H N N 346 SER N N N N 347 SER CA C N S 348 SER C C N N 349 SER O O N N 350 SER CB C N N 351 SER OG O N N 352 SER OXT O N N 353 SER H H N N 354 SER H2 H N N 355 SER HA H N N 356 SER HB2 H N N 357 SER HB3 H N N 358 SER HG H N N 359 SER HXT H N N 360 THR N N N N 361 THR CA C N S 362 THR C C N N 363 THR O O N N 364 THR CB C N R 365 THR OG1 O N N 366 THR CG2 C N N 367 THR OXT O N N 368 THR H H N N 369 THR H2 H N N 370 THR HA H N N 371 THR HB H N N 372 THR HG1 H N N 373 THR HG21 H N N 374 THR HG22 H N N 375 THR HG23 H N N 376 THR HXT H N N 377 TRP N N N N 378 TRP CA C N S 379 TRP C C N N 380 TRP O O N N 381 TRP CB C N N 382 TRP CG C Y N 383 TRP CD1 C Y N 384 TRP CD2 C Y N 385 TRP NE1 N Y N 386 TRP CE2 C Y N 387 TRP CE3 C Y N 388 TRP CZ2 C Y N 389 TRP CZ3 C Y N 390 TRP CH2 C Y N 391 TRP OXT O N N 392 TRP H H N N 393 TRP H2 H N N 394 TRP HA H N N 395 TRP HB2 H N N 396 TRP HB3 H N N 397 TRP HD1 H N N 398 TRP HE1 H N N 399 TRP HE3 H N N 400 TRP HZ2 H N N 401 TRP HZ3 H N N 402 TRP HH2 H N N 403 TRP HXT H N N 404 TYR N N N N 405 TYR CA C N S 406 TYR C C N N 407 TYR O O N N 408 TYR CB C N N 409 TYR CG C Y N 410 TYR CD1 C Y N 411 TYR CD2 C Y N 412 TYR CE1 C Y N 413 TYR CE2 C Y N 414 TYR CZ C Y N 415 TYR OH O N N 416 TYR OXT O N N 417 TYR H H N N 418 TYR H2 H N N 419 TYR HA H N N 420 TYR HB2 H N N 421 TYR HB3 H N N 422 TYR HD1 H N N 423 TYR HD2 H N N 424 TYR HE1 H N N 425 TYR HE2 H N N 426 TYR HH H N N 427 TYR HXT H N N 428 VAL N N N N 429 VAL CA C N S 430 VAL C C N N 431 VAL O O N N 432 VAL CB C N N 433 VAL CG1 C N N 434 VAL CG2 C N N 435 VAL OXT O N N 436 VAL H H N N 437 VAL H2 H N N 438 VAL HA H N N 439 VAL HB H N N 440 VAL HG11 H N N 441 VAL HG12 H N N 442 VAL HG13 H N N 443 VAL HG21 H N N 444 VAL HG22 H N N 445 VAL HG23 H N N 446 VAL HXT H N N 447 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADA C1 C2 sing N N 1 ADA C1 O1 sing N N 2 ADA C1 O5 sing N N 3 ADA C1 H1 sing N N 4 ADA C2 C3 sing N N 5 ADA C2 O2 sing N N 6 ADA C2 H2 sing N N 7 ADA C3 C4 sing N N 8 ADA C3 O3 sing N N 9 ADA C3 H3 sing N N 10 ADA C4 C5 sing N N 11 ADA C4 O4 sing N N 12 ADA C4 H4 sing N N 13 ADA C5 C6 sing N N 14 ADA C5 O5 sing N N 15 ADA C5 H5 sing N N 16 ADA C6 O6B sing N N 17 ADA C6 O6A doub N N 18 ADA O1 HO1 sing N N 19 ADA O2 HO2 sing N N 20 ADA O3 HO3 sing N N 21 ADA O4 HO4 sing N N 22 ADA O6B HO6B sing N N 23 ALA N CA sing N N 24 ALA N H sing N N 25 ALA N H2 sing N N 26 ALA CA C sing N N 27 ALA CA CB sing N N 28 ALA CA HA sing N N 29 ALA C O doub N N 30 ALA C OXT sing N N 31 ALA CB HB1 sing N N 32 ALA CB HB2 sing N N 33 ALA CB HB3 sing N N 34 ALA OXT HXT sing N N 35 ARG N CA sing N N 36 ARG N H sing N N 37 ARG N H2 sing N N 38 ARG CA C sing N N 39 ARG CA CB sing N N 40 ARG CA HA sing N N 41 ARG C O doub N N 42 ARG C OXT sing N N 43 ARG CB CG sing N N 44 ARG CB HB2 sing N N 45 ARG CB HB3 sing N N 46 ARG CG CD sing N N 47 ARG CG HG2 sing N N 48 ARG CG HG3 sing N N 49 ARG CD NE sing N N 50 ARG CD HD2 sing N N 51 ARG CD HD3 sing N N 52 ARG NE CZ sing N N 53 ARG NE HE sing N N 54 ARG CZ NH1 sing N N 55 ARG CZ NH2 doub N N 56 ARG NH1 HH11 sing N N 57 ARG NH1 HH12 sing N N 58 ARG NH2 HH21 sing N N 59 ARG NH2 HH22 sing N N 60 ARG OXT HXT sing N N 61 ASN N CA sing N N 62 ASN N H sing N N 63 ASN N H2 sing N N 64 ASN CA C sing N N 65 ASN CA CB sing N N 66 ASN CA HA sing N N 67 ASN C O doub N N 68 ASN C OXT sing N N 69 ASN CB CG sing N N 70 ASN CB HB2 sing N N 71 ASN CB HB3 sing N N 72 ASN CG OD1 doub N N 73 ASN CG ND2 sing N N 74 ASN ND2 HD21 sing N N 75 ASN ND2 HD22 sing N N 76 ASN OXT HXT sing N N 77 ASP N CA sing N N 78 ASP N H sing N N 79 ASP N H2 sing N N 80 ASP CA C sing N N 81 ASP CA CB sing N N 82 ASP CA HA sing N N 83 ASP C O doub N N 84 ASP C OXT sing N N 85 ASP CB CG sing N N 86 ASP CB HB2 sing N N 87 ASP CB HB3 sing N N 88 ASP CG OD1 doub N N 89 ASP CG OD2 sing N N 90 ASP OD2 HD2 sing N N 91 ASP OXT HXT sing N N 92 CYS N CA sing N N 93 CYS N H sing N N 94 CYS N H2 sing N N 95 CYS CA C sing N N 96 CYS CA CB sing N N 97 CYS CA HA sing N N 98 CYS C O doub N N 99 CYS C OXT sing N N 100 CYS CB SG sing N N 101 CYS CB HB2 sing N N 102 CYS CB HB3 sing N N 103 CYS SG HG sing N N 104 CYS OXT HXT sing N N 105 EPE N1 C2 sing N N 106 EPE N1 C6 sing N N 107 EPE N1 C9 sing N N 108 EPE C2 C3 sing N N 109 EPE C2 H21 sing N N 110 EPE C2 H22 sing N N 111 EPE C3 N4 sing N N 112 EPE C3 H31 sing N N 113 EPE C3 H32 sing N N 114 EPE N4 C5 sing N N 115 EPE N4 C7 sing N N 116 EPE C5 C6 sing N N 117 EPE C5 H51 sing N N 118 EPE C5 H52 sing N N 119 EPE C6 H61 sing N N 120 EPE C6 H62 sing N N 121 EPE C7 C8 sing N N 122 EPE C7 H71 sing N N 123 EPE C7 H72 sing N N 124 EPE C8 O8 sing N N 125 EPE C8 H81 sing N N 126 EPE C8 H82 sing N N 127 EPE O8 HO8 sing N N 128 EPE C9 C10 sing N N 129 EPE C9 H91 sing N N 130 EPE C9 H92 sing N N 131 EPE C10 S sing N N 132 EPE C10 H101 sing N N 133 EPE C10 H102 sing N N 134 EPE S O1S doub N N 135 EPE S O2S doub N N 136 EPE S O3S sing N N 137 EPE O3S HOS3 sing N N 138 GLN N CA sing N N 139 GLN N H sing N N 140 GLN N H2 sing N N 141 GLN CA C sing N N 142 GLN CA CB sing N N 143 GLN CA HA sing N N 144 GLN C O doub N N 145 GLN C OXT sing N N 146 GLN CB CG sing N N 147 GLN CB HB2 sing N N 148 GLN CB HB3 sing N N 149 GLN CG CD sing N N 150 GLN CG HG2 sing N N 151 GLN CG HG3 sing N N 152 GLN CD OE1 doub N N 153 GLN CD NE2 sing N N 154 GLN NE2 HE21 sing N N 155 GLN NE2 HE22 sing N N 156 GLN OXT HXT sing N N 157 GLU N CA sing N N 158 GLU N H sing N N 159 GLU N H2 sing N N 160 GLU CA C sing N N 161 GLU CA CB sing N N 162 GLU CA HA sing N N 163 GLU C O doub N N 164 GLU C OXT sing N N 165 GLU CB CG sing N N 166 GLU CB HB2 sing N N 167 GLU CB HB3 sing N N 168 GLU CG CD sing N N 169 GLU CG HG2 sing N N 170 GLU CG HG3 sing N N 171 GLU CD OE1 doub N N 172 GLU CD OE2 sing N N 173 GLU OE2 HE2 sing N N 174 GLU OXT HXT sing N N 175 GLY N CA sing N N 176 GLY N H sing N N 177 GLY N H2 sing N N 178 GLY CA C sing N N 179 GLY CA HA2 sing N N 180 GLY CA HA3 sing N N 181 GLY C O doub N N 182 GLY C OXT sing N N 183 GLY OXT HXT sing N N 184 HIS N CA sing N N 185 HIS N H sing N N 186 HIS N H2 sing N N 187 HIS CA C sing N N 188 HIS CA CB sing N N 189 HIS CA HA sing N N 190 HIS C O doub N N 191 HIS C OXT sing N N 192 HIS CB CG sing N N 193 HIS CB HB2 sing N N 194 HIS CB HB3 sing N N 195 HIS CG ND1 sing Y N 196 HIS CG CD2 doub Y N 197 HIS ND1 CE1 doub Y N 198 HIS ND1 HD1 sing N N 199 HIS CD2 NE2 sing Y N 200 HIS CD2 HD2 sing N N 201 HIS CE1 NE2 sing Y N 202 HIS CE1 HE1 sing N N 203 HIS NE2 HE2 sing N N 204 HIS OXT HXT sing N N 205 HOH O H1 sing N N 206 HOH O H2 sing N N 207 ILE N CA sing N N 208 ILE N H sing N N 209 ILE N H2 sing N N 210 ILE CA C sing N N 211 ILE CA CB sing N N 212 ILE CA HA sing N N 213 ILE C O doub N N 214 ILE C OXT sing N N 215 ILE CB CG1 sing N N 216 ILE CB CG2 sing N N 217 ILE CB HB sing N N 218 ILE CG1 CD1 sing N N 219 ILE CG1 HG12 sing N N 220 ILE CG1 HG13 sing N N 221 ILE CG2 HG21 sing N N 222 ILE CG2 HG22 sing N N 223 ILE CG2 HG23 sing N N 224 ILE CD1 HD11 sing N N 225 ILE CD1 HD12 sing N N 226 ILE CD1 HD13 sing N N 227 ILE OXT HXT sing N N 228 LEU N CA sing N N 229 LEU N H sing N N 230 LEU N H2 sing N N 231 LEU CA C sing N N 232 LEU CA CB sing N N 233 LEU CA HA sing N N 234 LEU C O doub N N 235 LEU C OXT sing N N 236 LEU CB CG sing N N 237 LEU CB HB2 sing N N 238 LEU CB HB3 sing N N 239 LEU CG CD1 sing N N 240 LEU CG CD2 sing N N 241 LEU CG HG sing N N 242 LEU CD1 HD11 sing N N 243 LEU CD1 HD12 sing N N 244 LEU CD1 HD13 sing N N 245 LEU CD2 HD21 sing N N 246 LEU CD2 HD22 sing N N 247 LEU CD2 HD23 sing N N 248 LEU OXT HXT sing N N 249 LYS N CA sing N N 250 LYS N H sing N N 251 LYS N H2 sing N N 252 LYS CA C sing N N 253 LYS CA CB sing N N 254 LYS CA HA sing N N 255 LYS C O doub N N 256 LYS C OXT sing N N 257 LYS CB CG sing N N 258 LYS CB HB2 sing N N 259 LYS CB HB3 sing N N 260 LYS CG CD sing N N 261 LYS CG HG2 sing N N 262 LYS CG HG3 sing N N 263 LYS CD CE sing N N 264 LYS CD HD2 sing N N 265 LYS CD HD3 sing N N 266 LYS CE NZ sing N N 267 LYS CE HE2 sing N N 268 LYS CE HE3 sing N N 269 LYS NZ HZ1 sing N N 270 LYS NZ HZ2 sing N N 271 LYS NZ HZ3 sing N N 272 LYS OXT HXT sing N N 273 MET N CA sing N N 274 MET N H sing N N 275 MET N H2 sing N N 276 MET CA C sing N N 277 MET CA CB sing N N 278 MET CA HA sing N N 279 MET C O doub N N 280 MET C OXT sing N N 281 MET CB CG sing N N 282 MET CB HB2 sing N N 283 MET CB HB3 sing N N 284 MET CG SD sing N N 285 MET CG HG2 sing N N 286 MET CG HG3 sing N N 287 MET SD CE sing N N 288 MET CE HE1 sing N N 289 MET CE HE2 sing N N 290 MET CE HE3 sing N N 291 MET OXT HXT sing N N 292 PHE N CA sing N N 293 PHE N H sing N N 294 PHE N H2 sing N N 295 PHE CA C sing N N 296 PHE CA CB sing N N 297 PHE CA HA sing N N 298 PHE C O doub N N 299 PHE C OXT sing N N 300 PHE CB CG sing N N 301 PHE CB HB2 sing N N 302 PHE CB HB3 sing N N 303 PHE CG CD1 doub Y N 304 PHE CG CD2 sing Y N 305 PHE CD1 CE1 sing Y N 306 PHE CD1 HD1 sing N N 307 PHE CD2 CE2 doub Y N 308 PHE CD2 HD2 sing N N 309 PHE CE1 CZ doub Y N 310 PHE CE1 HE1 sing N N 311 PHE CE2 CZ sing Y N 312 PHE CE2 HE2 sing N N 313 PHE CZ HZ sing N N 314 PHE OXT HXT sing N N 315 PRO N CA sing N N 316 PRO N CD sing N N 317 PRO N H sing N N 318 PRO CA C sing N N 319 PRO CA CB sing N N 320 PRO CA HA sing N N 321 PRO C O doub N N 322 PRO C OXT sing N N 323 PRO CB CG sing N N 324 PRO CB HB2 sing N N 325 PRO CB HB3 sing N N 326 PRO CG CD sing N N 327 PRO CG HG2 sing N N 328 PRO CG HG3 sing N N 329 PRO CD HD2 sing N N 330 PRO CD HD3 sing N N 331 PRO OXT HXT sing N N 332 SER N CA sing N N 333 SER N H sing N N 334 SER N H2 sing N N 335 SER CA C sing N N 336 SER CA CB sing N N 337 SER CA HA sing N N 338 SER C O doub N N 339 SER C OXT sing N N 340 SER CB OG sing N N 341 SER CB HB2 sing N N 342 SER CB HB3 sing N N 343 SER OG HG sing N N 344 SER OXT HXT sing N N 345 THR N CA sing N N 346 THR N H sing N N 347 THR N H2 sing N N 348 THR CA C sing N N 349 THR CA CB sing N N 350 THR CA HA sing N N 351 THR C O doub N N 352 THR C OXT sing N N 353 THR CB OG1 sing N N 354 THR CB CG2 sing N N 355 THR CB HB sing N N 356 THR OG1 HG1 sing N N 357 THR CG2 HG21 sing N N 358 THR CG2 HG22 sing N N 359 THR CG2 HG23 sing N N 360 THR OXT HXT sing N N 361 TRP N CA sing N N 362 TRP N H sing N N 363 TRP N H2 sing N N 364 TRP CA C sing N N 365 TRP CA CB sing N N 366 TRP CA HA sing N N 367 TRP C O doub N N 368 TRP C OXT sing N N 369 TRP CB CG sing N N 370 TRP CB HB2 sing N N 371 TRP CB HB3 sing N N 372 TRP CG CD1 doub Y N 373 TRP CG CD2 sing Y N 374 TRP CD1 NE1 sing Y N 375 TRP CD1 HD1 sing N N 376 TRP CD2 CE2 doub Y N 377 TRP CD2 CE3 sing Y N 378 TRP NE1 CE2 sing Y N 379 TRP NE1 HE1 sing N N 380 TRP CE2 CZ2 sing Y N 381 TRP CE3 CZ3 doub Y N 382 TRP CE3 HE3 sing N N 383 TRP CZ2 CH2 doub Y N 384 TRP CZ2 HZ2 sing N N 385 TRP CZ3 CH2 sing Y N 386 TRP CZ3 HZ3 sing N N 387 TRP CH2 HH2 sing N N 388 TRP OXT HXT sing N N 389 TYR N CA sing N N 390 TYR N H sing N N 391 TYR N H2 sing N N 392 TYR CA C sing N N 393 TYR CA CB sing N N 394 TYR CA HA sing N N 395 TYR C O doub N N 396 TYR C OXT sing N N 397 TYR CB CG sing N N 398 TYR CB HB2 sing N N 399 TYR CB HB3 sing N N 400 TYR CG CD1 doub Y N 401 TYR CG CD2 sing Y N 402 TYR CD1 CE1 sing Y N 403 TYR CD1 HD1 sing N N 404 TYR CD2 CE2 doub Y N 405 TYR CD2 HD2 sing N N 406 TYR CE1 CZ doub Y N 407 TYR CE1 HE1 sing N N 408 TYR CE2 CZ sing Y N 409 TYR CE2 HE2 sing N N 410 TYR CZ OH sing N N 411 TYR OH HH sing N N 412 TYR OXT HXT sing N N 413 VAL N CA sing N N 414 VAL N H sing N N 415 VAL N H2 sing N N 416 VAL CA C sing N N 417 VAL CA CB sing N N 418 VAL CA HA sing N N 419 VAL C O doub N N 420 VAL C OXT sing N N 421 VAL CB CG1 sing N N 422 VAL CB CG2 sing N N 423 VAL CB HB sing N N 424 VAL CG1 HG11 sing N N 425 VAL CG1 HG12 sing N N 426 VAL CG1 HG13 sing N N 427 VAL CG2 HG21 sing N N 428 VAL CG2 HG22 sing N N 429 VAL CG2 HG23 sing N N 430 VAL OXT HXT sing N N 431 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 ADA 1 B ADA 1 A AD0 500 n B 2 ADA 2 B ADA 2 A AD0 500 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ADA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpAa ADA 'COMMON NAME' GMML 1.0 'a-D-galactopyranuronic acid' ADA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpA ADA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalA # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpAa1-4DGalpAa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2112A-1a_1-5]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-GalpA]{[(4+1)][a-D-GalpA]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 ADA _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 ADA _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 ADA 1 n 2 ADA 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3PRK _pdbx_initial_refinement_model.details 'PDB ENTRY 3PRK' #