data_3E5S # _entry.id 3E5S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3E5S pdb_00003e5s 10.2210/pdb3e5s/pdb RCSB RCSB048910 ? ? WWPDB D_1000048910 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2RBM 'Crystal structure of Staphylococcal nuclease variant Delta+PHS I72K at cryogenic temperature' unspecified PDB 3BDC 'Crystal structure of Staphylococcal nuclease variant Delta+PHS at cryogenic temperature' unspecified PDB 3D4D 'Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91E at cryogenic temperature' unspecified PDB 3DMU 'Crystal structure of Staphylococcal nuclease variant PHS T62K at cryogenic temperature' unspecified PDB 1STN 'The Crystal Structure of Staphylococcal Nuclease Refined at 1.7 Angstrom Resolution' unspecified PDB 3c1e . unspecified PDB 3c1f . unspecified PDB 3d6c . unspecified PDB 3eji . unspecified PDB 3ero . unspecified PDB 3erq . unspecified PDB 3evq . unspecified # _pdbx_database_status.entry_id 3E5S _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-08-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Khangulov, V.S.' 1 'Schlessman, J.L.' 2 'Garcia-Moreno, E.B.' 3 # _citation.id primary _citation.title 'Crystal structure of Staphylococcal nuclease variant Delta+PHS L103K at cryogenic temperature' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Khangulov, V.S.' 1 ? primary 'Schlessman, J.L.' 2 ? primary 'Garcia-Moreno, E.B.' 3 ? # _cell.length_a 31.172 _cell.length_b 78.514 _cell.length_c 60.949 _cell.angle_alpha 90.000 _cell.angle_beta 90.040 _cell.angle_gamma 90.000 _cell.entry_id 3E5S _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3E5S _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Thermonuclease 16159.486 2 3.1.31.1 G50F/V51N/L103K/P117G/H124L/S128A/Del44-49 ? ? 2 non-polymer syn "THYMIDINE-3',5'-DIPHOSPHATE" 402.188 2 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 water nat water 18.015 151 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TNase, Micrococcal nuclease, Staphylococcal nuclease, Nuclease B, Nuclease A' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEFNEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYG RGLAYIYADGKMVNEAKVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWSEDNADSGQ ; _entity_poly.pdbx_seq_one_letter_code_can ;ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEFNEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYG RGLAYIYADGKMVNEAKVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWSEDNADSGQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 SER n 1 4 THR n 1 5 LYS n 1 6 LYS n 1 7 LEU n 1 8 HIS n 1 9 LYS n 1 10 GLU n 1 11 PRO n 1 12 ALA n 1 13 THR n 1 14 LEU n 1 15 ILE n 1 16 LYS n 1 17 ALA n 1 18 ILE n 1 19 ASP n 1 20 GLY n 1 21 ASP n 1 22 THR n 1 23 VAL n 1 24 LYS n 1 25 LEU n 1 26 MET n 1 27 TYR n 1 28 LYS n 1 29 GLY n 1 30 GLN n 1 31 PRO n 1 32 MET n 1 33 THR n 1 34 PHE n 1 35 ARG n 1 36 LEU n 1 37 LEU n 1 38 LEU n 1 39 VAL n 1 40 ASP n 1 41 THR n 1 42 PRO n 1 43 GLU n 1 44 PHE n 1 45 ASN n 1 46 GLU n 1 47 LYS n 1 48 TYR n 1 49 GLY n 1 50 PRO n 1 51 GLU n 1 52 ALA n 1 53 SER n 1 54 ALA n 1 55 PHE n 1 56 THR n 1 57 LYS n 1 58 LYS n 1 59 MET n 1 60 VAL n 1 61 GLU n 1 62 ASN n 1 63 ALA n 1 64 LYS n 1 65 LYS n 1 66 ILE n 1 67 GLU n 1 68 VAL n 1 69 GLU n 1 70 PHE n 1 71 ASP n 1 72 LYS n 1 73 GLY n 1 74 GLN n 1 75 ARG n 1 76 THR n 1 77 ASP n 1 78 LYS n 1 79 TYR n 1 80 GLY n 1 81 ARG n 1 82 GLY n 1 83 LEU n 1 84 ALA n 1 85 TYR n 1 86 ILE n 1 87 TYR n 1 88 ALA n 1 89 ASP n 1 90 GLY n 1 91 LYS n 1 92 MET n 1 93 VAL n 1 94 ASN n 1 95 GLU n 1 96 ALA n 1 97 LYS n 1 98 VAL n 1 99 ARG n 1 100 GLN n 1 101 GLY n 1 102 LEU n 1 103 ALA n 1 104 LYS n 1 105 VAL n 1 106 ALA n 1 107 TYR n 1 108 VAL n 1 109 TYR n 1 110 LYS n 1 111 GLY n 1 112 ASN n 1 113 ASN n 1 114 THR n 1 115 HIS n 1 116 GLU n 1 117 GLN n 1 118 LEU n 1 119 LEU n 1 120 ARG n 1 121 LYS n 1 122 ALA n 1 123 GLU n 1 124 ALA n 1 125 GLN n 1 126 ALA n 1 127 LYS n 1 128 LYS n 1 129 GLU n 1 130 LYS n 1 131 LEU n 1 132 ASN n 1 133 ILE n 1 134 TRP n 1 135 SER n 1 136 GLU n 1 137 ASP n 1 138 ASN n 1 139 ALA n 1 140 ASP n 1 141 SER n 1 142 GLY n 1 143 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene nuc _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24a+ _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NUC_STAAU _struct_ref.pdbx_db_accession P00644 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQ RTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWSEDNADSGQ ; _struct_ref.pdbx_align_begin 83 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3E5S A 1 ? 143 ? P00644 83 ? 231 ? 1 149 2 1 3E5S B 1 ? 143 ? P00644 83 ? 231 ? 1 149 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3E5S ? A ? ? UNP P00644 THR 126 deletion ? 1 1 3E5S ? A ? ? UNP P00644 LYS 127 deletion ? 2 1 3E5S ? A ? ? UNP P00644 HIS 128 deletion ? 3 1 3E5S ? A ? ? UNP P00644 PRO 129 deletion ? 4 1 3E5S ? A ? ? UNP P00644 LYS 130 deletion ? 5 1 3E5S ? A ? ? UNP P00644 LYS 131 deletion ? 6 1 3E5S PHE A 44 ? UNP P00644 GLY 132 'engineered mutation' 50 7 1 3E5S ASN A 45 ? UNP P00644 VAL 133 'engineered mutation' 51 8 1 3E5S LYS A 97 ? UNP P00644 LEU 185 'engineered mutation' 103 9 1 3E5S GLY A 111 ? UNP P00644 PRO 199 'engineered mutation' 117 10 1 3E5S LEU A 118 ? UNP P00644 HIS 206 'engineered mutation' 124 11 1 3E5S ALA A 122 ? UNP P00644 SER 210 'engineered mutation' 128 12 2 3E5S ? B ? ? UNP P00644 THR 126 deletion ? 13 2 3E5S ? B ? ? UNP P00644 LYS 127 deletion ? 14 2 3E5S ? B ? ? UNP P00644 HIS 128 deletion ? 15 2 3E5S ? B ? ? UNP P00644 PRO 129 deletion ? 16 2 3E5S ? B ? ? UNP P00644 LYS 130 deletion ? 17 2 3E5S ? B ? ? UNP P00644 LYS 131 deletion ? 18 2 3E5S PHE B 44 ? UNP P00644 GLY 132 'engineered mutation' 50 19 2 3E5S ASN B 45 ? UNP P00644 VAL 133 'engineered mutation' 51 20 2 3E5S LYS B 97 ? UNP P00644 LEU 185 'engineered mutation' 103 21 2 3E5S GLY B 111 ? UNP P00644 PRO 199 'engineered mutation' 117 22 2 3E5S LEU B 118 ? UNP P00644 HIS 206 'engineered mutation' 124 23 2 3E5S ALA B 122 ? UNP P00644 SER 210 'engineered mutation' 128 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THP 'DNA linking' . "THYMIDINE-3',5'-DIPHOSPHATE" ? 'C10 H16 N2 O11 P2' 402.188 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3E5S _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '35% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'APEX II CCD' _diffrn_detector.pdbx_collection_date 2007-07-31 _diffrn_detector.details 'multi-layer optics' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator GE111 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'SEALED TUBE' _diffrn_source.type OTHER _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3E5S _reflns.d_resolution_high 1.859 _reflns.number_obs 24052 _reflns.pdbx_Rsym_value 0.0739 _reflns.pdbx_redundancy 4.92 _reflns.percent_possible_obs 97.60 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_low 60.95 _reflns.number_all 24646 _reflns.pdbx_Rmerge_I_obs 0.0658 _reflns.pdbx_netI_over_sigmaI 15.70 _reflns.B_iso_Wilson_estimate 21.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.859 _reflns_shell.d_res_low 1.96 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.3219 _reflns_shell.meanI_over_sigI_obs 2.48 _reflns_shell.pdbx_Rsym_value 0.4179 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 2.19 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3521 _reflns_shell.percent_possible_all 91.1 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3E5S _refine.ls_d_res_high 2.000 _refine.ls_d_res_low ? _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.770 _refine.ls_number_reflns_obs 18704 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.167 _refine.ls_R_factor_R_work 0.164 _refine.ls_wR_factor_R_work 0.159 _refine.ls_R_factor_R_free 0.224 _refine.ls_wR_factor_R_free 0.205 _refine.ls_percent_reflns_R_free 4.900 _refine.ls_number_reflns_R_free 974 _refine.B_iso_mean 14.490 _refine.aniso_B[1][1] -2.070 _refine.aniso_B[2][2] 5.420 _refine.aniso_B[3][3] -3.360 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.010 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.934 _refine.correlation_coeff_Fo_to_Fc_free 0.882 _refine.overall_SU_R_Cruickshank_DPI 0.035 _refine.overall_SU_R_free 0.034 _refine.pdbx_overall_ESU_R 0.035 _refine.pdbx_overall_ESU_R_Free 0.034 _refine.overall_SU_ML 0.073 _refine.overall_SU_B 2.575 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.overall_FOM_work_R_set 0.905 _refine.B_iso_max 49.01 _refine.B_iso_min 0.00 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 27776 _refine.ls_R_factor_all 0.167 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 3BDC.PDB _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3E5S _refine_analyze.Luzzati_coordinate_error_obs 0.1875 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2114 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 2317 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2212 0.006 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2992 1.477 2.001 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 276 3.414 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 98 32.368 25.102 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 434 12.314 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10 11.373 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 322 0.126 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1618 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1308 2.357 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2106 3.106 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 904 5.130 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 876 6.262 4.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.000 2.052 20 96.560 1338 . 0.134 0.273 . 93 . 1431 1482 . 'X-RAY DIFFRACTION' 2.052 2.108 20 96.776 . . 0.143 0.283 . 62 . . 1427 . 'X-RAY DIFFRACTION' 2.108 2.169 20 98.291 . . 0.150 0.244 . 64 . . 1404 . 'X-RAY DIFFRACTION' 2.169 2.236 20 97.40 . . 0.149 0.190 . 68 . . 1346 . 'X-RAY DIFFRACTION' 2.236 2.309 20 98.526 . . 0.166 0.215 . 52 . . 1289 . 'X-RAY DIFFRACTION' 2.309 2.390 20 98.447 . . 0.178 0.223 . 61 . . 1288 . 'X-RAY DIFFRACTION' # _struct.entry_id 3E5S _struct.title 'Crystal structure of Staphylococcal nuclease variant Delta+PHS L103K at cryogenic temperature' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3E5S _struct_keywords.text ;Staphylococcal nuclease, hyperstable variant, hydrolase, pdtp, Calcium, Endonuclease, Membrane, Metal-binding, Nuclease, Secreted, Zymogen ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 48 ? ALA A 63 ? TYR A 54 ALA A 69 1 ? 16 HELX_P HELX_P2 2 VAL A 93 ? GLN A 100 ? VAL A 99 GLN A 106 1 ? 8 HELX_P HELX_P3 3 HIS A 115 ? LYS A 128 ? HIS A 121 LYS A 134 1 ? 14 HELX_P HELX_P4 4 LEU A 131 ? SER A 135 ? LEU A 137 SER A 141 5 ? 5 HELX_P HELX_P5 5 TYR B 48 ? ASN B 62 ? TYR B 54 ASN B 68 1 ? 15 HELX_P HELX_P6 6 VAL B 93 ? GLN B 100 ? VAL B 99 GLN B 106 1 ? 8 HELX_P HELX_P7 7 HIS B 115 ? GLU B 129 ? HIS B 121 GLU B 135 1 ? 15 HELX_P HELX_P8 8 LEU B 131 ? SER B 135 ? LEU B 137 SER B 141 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? C ? 7 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 91 ? MET A 92 ? LYS A 97 MET A 98 A 2 GLY A 82 ? ALA A 88 ? GLY A 88 ALA A 94 A 3 ILE A 66 ? GLU A 69 ? ILE A 72 GLU A 75 A 4 LYS A 9 ? ALA A 17 ? LYS A 9 ALA A 17 A 5 THR A 22 ? TYR A 27 ? THR A 22 TYR A 27 A 6 GLN A 30 ? LEU A 36 ? GLN A 30 LEU A 36 A 7 GLY A 82 ? ALA A 88 ? GLY A 88 ALA A 94 B 1 VAL A 39 ? ASP A 40 ? VAL A 39 ASP A 40 B 2 LYS A 104 ? VAL A 105 ? LYS A 110 VAL A 111 C 1 LYS B 91 ? MET B 92 ? LYS B 97 MET B 98 C 2 GLY B 82 ? ALA B 88 ? GLY B 88 ALA B 94 C 3 ILE B 66 ? GLU B 69 ? ILE B 72 GLU B 75 C 4 GLU B 10 ? ALA B 17 ? GLU B 10 ALA B 17 C 5 THR B 22 ? TYR B 27 ? THR B 22 TYR B 27 C 6 GLN B 30 ? LEU B 36 ? GLN B 30 LEU B 36 C 7 GLY B 82 ? ALA B 88 ? GLY B 88 ALA B 94 D 1 VAL B 39 ? ASP B 40 ? VAL B 39 ASP B 40 D 2 LYS B 104 ? VAL B 105 ? LYS B 110 VAL B 111 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 91 ? O LYS A 97 N ALA A 88 ? N ALA A 94 A 2 3 O TYR A 85 ? O TYR A 91 N GLU A 69 ? N GLU A 75 A 3 4 O VAL A 68 ? O VAL A 74 N GLU A 10 ? N GLU A 10 A 4 5 N THR A 13 ? N THR A 13 O MET A 26 ? O MET A 26 A 5 6 N LEU A 25 ? N LEU A 25 O MET A 32 ? O MET A 32 A 6 7 N ARG A 35 ? N ARG A 35 O GLY A 82 ? O GLY A 88 B 1 2 N ASP A 40 ? N ASP A 40 O LYS A 104 ? O LYS A 110 C 1 2 O LYS B 91 ? O LYS B 97 N ALA B 88 ? N ALA B 94 C 2 3 O TYR B 85 ? O TYR B 91 N GLU B 69 ? N GLU B 75 C 3 4 O VAL B 68 ? O VAL B 74 N GLU B 10 ? N GLU B 10 C 4 5 N LYS B 16 ? N LYS B 16 O LYS B 24 ? O LYS B 24 C 5 6 N VAL B 23 ? N VAL B 23 O PHE B 34 ? O PHE B 34 C 6 7 N THR B 33 ? N THR B 33 O GLY B 82 ? O GLY B 88 D 1 2 N ASP B 40 ? N ASP B 40 O LYS B 104 ? O LYS B 110 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A THP 150 ? 15 'BINDING SITE FOR RESIDUE THP A 150' AC2 Software A CA 151 ? 8 'BINDING SITE FOR RESIDUE CA A 151' AC3 Software B THP 150 ? 17 'BINDING SITE FOR RESIDUE THP B 150' AC4 Software B CA 151 ? 5 'BINDING SITE FOR RESIDUE CA B 151' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 ARG A 35 ? ARG A 35 . ? 1_555 ? 2 AC1 15 LYS A 78 ? LYS A 84 . ? 1_555 ? 3 AC1 15 TYR A 79 ? TYR A 85 . ? 1_555 ? 4 AC1 15 ARG A 81 ? ARG A 87 . ? 1_555 ? 5 AC1 15 TYR A 107 ? TYR A 113 . ? 1_555 ? 6 AC1 15 TYR A 109 ? TYR A 115 . ? 1_555 ? 7 AC1 15 LYS A 121 ? LYS A 127 . ? 1_455 ? 8 AC1 15 CA D . ? CA A 151 . ? 1_555 ? 9 AC1 15 HOH G . ? HOH A 153 . ? 1_555 ? 10 AC1 15 HOH G . ? HOH A 157 . ? 1_555 ? 11 AC1 15 HOH G . ? HOH A 159 . ? 1_555 ? 12 AC1 15 HOH G . ? HOH A 160 . ? 1_555 ? 13 AC1 15 HOH G . ? HOH A 183 . ? 1_555 ? 14 AC1 15 HOH G . ? HOH A 189 . ? 1_555 ? 15 AC1 15 HOH G . ? HOH A 208 . ? 1_555 ? 16 AC2 8 ASP A 21 ? ASP A 21 . ? 1_555 ? 17 AC2 8 ARG A 35 ? ARG A 35 . ? 1_555 ? 18 AC2 8 ASP A 40 ? ASP A 40 . ? 1_555 ? 19 AC2 8 GLU A 43 ? GLU A 43 . ? 1_555 ? 20 AC2 8 THP C . ? THP A 150 . ? 1_555 ? 21 AC2 8 HOH G . ? HOH A 156 . ? 1_555 ? 22 AC2 8 HOH G . ? HOH A 208 . ? 1_555 ? 23 AC2 8 HOH G . ? HOH A 224 . ? 1_555 ? 24 AC3 17 ARG B 35 ? ARG B 35 . ? 1_555 ? 25 AC3 17 LYS B 78 ? LYS B 84 . ? 1_555 ? 26 AC3 17 TYR B 79 ? TYR B 85 . ? 1_555 ? 27 AC3 17 ARG B 81 ? ARG B 87 . ? 1_555 ? 28 AC3 17 LEU B 83 ? LEU B 89 . ? 1_555 ? 29 AC3 17 TYR B 107 ? TYR B 113 . ? 1_555 ? 30 AC3 17 TYR B 109 ? TYR B 115 . ? 1_555 ? 31 AC3 17 LYS B 121 ? LYS B 127 . ? 1_455 ? 32 AC3 17 CA F . ? CA B 151 . ? 1_555 ? 33 AC3 17 HOH H . ? HOH B 153 . ? 1_555 ? 34 AC3 17 HOH H . ? HOH B 159 . ? 1_555 ? 35 AC3 17 HOH H . ? HOH B 166 . ? 1_555 ? 36 AC3 17 HOH H . ? HOH B 172 . ? 1_555 ? 37 AC3 17 HOH H . ? HOH B 183 . ? 1_555 ? 38 AC3 17 HOH H . ? HOH B 196 . ? 1_555 ? 39 AC3 17 HOH H . ? HOH B 205 . ? 1_555 ? 40 AC3 17 HOH H . ? HOH B 226 . ? 1_555 ? 41 AC4 5 ASP B 21 ? ASP B 21 . ? 1_555 ? 42 AC4 5 ASP B 40 ? ASP B 40 . ? 1_555 ? 43 AC4 5 THP E . ? THP B 150 . ? 1_555 ? 44 AC4 5 HOH H . ? HOH B 155 . ? 1_555 ? 45 AC4 5 HOH H . ? HOH B 167 . ? 1_555 ? # _atom_sites.entry_id 3E5S _atom_sites.fract_transf_matrix[1][1] 0.032080 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000023 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012737 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016407 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 LYS 6 6 ? ? ? A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 MET 26 26 26 MET MET A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 PHE 44 50 50 PHE PHE A . n A 1 45 ASN 45 51 51 ASN ASN A . n A 1 46 GLU 46 52 52 GLU GLU A . n A 1 47 LYS 47 53 53 LYS LYS A . n A 1 48 TYR 48 54 54 TYR TYR A . n A 1 49 GLY 49 55 55 GLY GLY A . n A 1 50 PRO 50 56 56 PRO PRO A . n A 1 51 GLU 51 57 57 GLU GLU A . n A 1 52 ALA 52 58 58 ALA ALA A . n A 1 53 SER 53 59 59 SER SER A . n A 1 54 ALA 54 60 60 ALA ALA A . n A 1 55 PHE 55 61 61 PHE PHE A . n A 1 56 THR 56 62 62 THR THR A . n A 1 57 LYS 57 63 63 LYS LYS A . n A 1 58 LYS 58 64 64 LYS LYS A . n A 1 59 MET 59 65 65 MET MET A . n A 1 60 VAL 60 66 66 VAL VAL A . n A 1 61 GLU 61 67 67 GLU GLU A . n A 1 62 ASN 62 68 68 ASN ASN A . n A 1 63 ALA 63 69 69 ALA ALA A . n A 1 64 LYS 64 70 70 LYS LYS A . n A 1 65 LYS 65 71 71 LYS LYS A . n A 1 66 ILE 66 72 72 ILE ILE A . n A 1 67 GLU 67 73 73 GLU GLU A . n A 1 68 VAL 68 74 74 VAL VAL A . n A 1 69 GLU 69 75 75 GLU GLU A . n A 1 70 PHE 70 76 76 PHE PHE A . n A 1 71 ASP 71 77 77 ASP ASP A . n A 1 72 LYS 72 78 78 LYS LYS A . n A 1 73 GLY 73 79 79 GLY GLY A . n A 1 74 GLN 74 80 80 GLN GLN A . n A 1 75 ARG 75 81 81 ARG ARG A . n A 1 76 THR 76 82 82 THR THR A . n A 1 77 ASP 77 83 83 ASP ASP A . n A 1 78 LYS 78 84 84 LYS LYS A . n A 1 79 TYR 79 85 85 TYR TYR A . n A 1 80 GLY 80 86 86 GLY GLY A . n A 1 81 ARG 81 87 87 ARG ARG A . n A 1 82 GLY 82 88 88 GLY GLY A . n A 1 83 LEU 83 89 89 LEU LEU A . n A 1 84 ALA 84 90 90 ALA ALA A . n A 1 85 TYR 85 91 91 TYR TYR A . n A 1 86 ILE 86 92 92 ILE ILE A . n A 1 87 TYR 87 93 93 TYR TYR A . n A 1 88 ALA 88 94 94 ALA ALA A . n A 1 89 ASP 89 95 95 ASP ASP A . n A 1 90 GLY 90 96 96 GLY GLY A . n A 1 91 LYS 91 97 97 LYS LYS A . n A 1 92 MET 92 98 98 MET MET A . n A 1 93 VAL 93 99 99 VAL VAL A . n A 1 94 ASN 94 100 100 ASN ASN A . n A 1 95 GLU 95 101 101 GLU GLU A . n A 1 96 ALA 96 102 102 ALA ALA A . n A 1 97 LYS 97 103 103 LYS LYS A . n A 1 98 VAL 98 104 104 VAL VAL A . n A 1 99 ARG 99 105 105 ARG ARG A . n A 1 100 GLN 100 106 106 GLN GLN A . n A 1 101 GLY 101 107 107 GLY GLY A . n A 1 102 LEU 102 108 108 LEU LEU A . n A 1 103 ALA 103 109 109 ALA ALA A . n A 1 104 LYS 104 110 110 LYS LYS A . n A 1 105 VAL 105 111 111 VAL VAL A . n A 1 106 ALA 106 112 112 ALA ALA A . n A 1 107 TYR 107 113 113 TYR TYR A . n A 1 108 VAL 108 114 114 VAL VAL A . n A 1 109 TYR 109 115 115 TYR TYR A . n A 1 110 LYS 110 116 116 LYS LYS A . n A 1 111 GLY 111 117 117 GLY GLY A . n A 1 112 ASN 112 118 118 ASN ASN A . n A 1 113 ASN 113 119 119 ASN ASN A . n A 1 114 THR 114 120 120 THR THR A . n A 1 115 HIS 115 121 121 HIS HIS A . n A 1 116 GLU 116 122 122 GLU GLU A . n A 1 117 GLN 117 123 123 GLN GLN A . n A 1 118 LEU 118 124 124 LEU LEU A . n A 1 119 LEU 119 125 125 LEU LEU A . n A 1 120 ARG 120 126 126 ARG ARG A . n A 1 121 LYS 121 127 127 LYS LYS A . n A 1 122 ALA 122 128 128 ALA ALA A . n A 1 123 GLU 123 129 129 GLU GLU A . n A 1 124 ALA 124 130 130 ALA ALA A . n A 1 125 GLN 125 131 131 GLN GLN A . n A 1 126 ALA 126 132 132 ALA ALA A . n A 1 127 LYS 127 133 133 LYS LYS A . n A 1 128 LYS 128 134 134 LYS LYS A . n A 1 129 GLU 129 135 135 GLU GLU A . n A 1 130 LYS 130 136 136 LYS LYS A . n A 1 131 LEU 131 137 137 LEU LEU A . n A 1 132 ASN 132 138 138 ASN ASN A . n A 1 133 ILE 133 139 139 ILE ILE A . n A 1 134 TRP 134 140 140 TRP TRP A . n A 1 135 SER 135 141 141 SER SER A . n A 1 136 GLU 136 142 ? ? ? A . n A 1 137 ASP 137 143 ? ? ? A . n A 1 138 ASN 138 144 ? ? ? A . n A 1 139 ALA 139 145 ? ? ? A . n A 1 140 ASP 140 146 ? ? ? A . n A 1 141 SER 141 147 ? ? ? A . n A 1 142 GLY 142 148 ? ? ? A . n A 1 143 GLN 143 149 ? ? ? A . n B 1 1 ALA 1 1 ? ? ? B . n B 1 2 THR 2 2 ? ? ? B . n B 1 3 SER 3 3 ? ? ? B . n B 1 4 THR 4 4 ? ? ? B . n B 1 5 LYS 5 5 ? ? ? B . n B 1 6 LYS 6 6 ? ? ? B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 HIS 8 8 8 HIS HIS B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 GLU 10 10 10 GLU GLU B . n B 1 11 PRO 11 11 11 PRO PRO B . n B 1 12 ALA 12 12 12 ALA ALA B . n B 1 13 THR 13 13 13 THR THR B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 ILE 18 18 18 ILE ILE B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 GLY 20 20 20 GLY GLY B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 MET 26 26 26 MET MET B . n B 1 27 TYR 27 27 27 TYR TYR B . n B 1 28 LYS 28 28 28 LYS LYS B . n B 1 29 GLY 29 29 29 GLY GLY B . n B 1 30 GLN 30 30 30 GLN GLN B . n B 1 31 PRO 31 31 31 PRO PRO B . n B 1 32 MET 32 32 32 MET MET B . n B 1 33 THR 33 33 33 THR THR B . n B 1 34 PHE 34 34 34 PHE PHE B . n B 1 35 ARG 35 35 35 ARG ARG B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 THR 41 41 41 THR THR B . n B 1 42 PRO 42 42 42 PRO PRO B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 PHE 44 50 50 PHE PHE B . n B 1 45 ASN 45 51 51 ASN ASN B . n B 1 46 GLU 46 52 52 GLU GLU B . n B 1 47 LYS 47 53 53 LYS LYS B . n B 1 48 TYR 48 54 54 TYR TYR B . n B 1 49 GLY 49 55 55 GLY GLY B . n B 1 50 PRO 50 56 56 PRO PRO B . n B 1 51 GLU 51 57 57 GLU GLU B . n B 1 52 ALA 52 58 58 ALA ALA B . n B 1 53 SER 53 59 59 SER SER B . n B 1 54 ALA 54 60 60 ALA ALA B . n B 1 55 PHE 55 61 61 PHE PHE B . n B 1 56 THR 56 62 62 THR THR B . n B 1 57 LYS 57 63 63 LYS LYS B . n B 1 58 LYS 58 64 64 LYS LYS B . n B 1 59 MET 59 65 65 MET MET B . n B 1 60 VAL 60 66 66 VAL VAL B . n B 1 61 GLU 61 67 67 GLU GLU B . n B 1 62 ASN 62 68 68 ASN ASN B . n B 1 63 ALA 63 69 69 ALA ALA B . n B 1 64 LYS 64 70 70 LYS LYS B . n B 1 65 LYS 65 71 71 LYS LYS B . n B 1 66 ILE 66 72 72 ILE ILE B . n B 1 67 GLU 67 73 73 GLU GLU B . n B 1 68 VAL 68 74 74 VAL VAL B . n B 1 69 GLU 69 75 75 GLU GLU B . n B 1 70 PHE 70 76 76 PHE PHE B . n B 1 71 ASP 71 77 77 ASP ASP B . n B 1 72 LYS 72 78 78 LYS LYS B . n B 1 73 GLY 73 79 79 GLY GLY B . n B 1 74 GLN 74 80 80 GLN GLN B . n B 1 75 ARG 75 81 81 ARG ARG B . n B 1 76 THR 76 82 82 THR THR B . n B 1 77 ASP 77 83 83 ASP ASP B . n B 1 78 LYS 78 84 84 LYS LYS B . n B 1 79 TYR 79 85 85 TYR TYR B . n B 1 80 GLY 80 86 86 GLY GLY B . n B 1 81 ARG 81 87 87 ARG ARG B . n B 1 82 GLY 82 88 88 GLY GLY B . n B 1 83 LEU 83 89 89 LEU LEU B . n B 1 84 ALA 84 90 90 ALA ALA B . n B 1 85 TYR 85 91 91 TYR TYR B . n B 1 86 ILE 86 92 92 ILE ILE B . n B 1 87 TYR 87 93 93 TYR TYR B . n B 1 88 ALA 88 94 94 ALA ALA B . n B 1 89 ASP 89 95 95 ASP ASP B . n B 1 90 GLY 90 96 96 GLY GLY B . n B 1 91 LYS 91 97 97 LYS LYS B . n B 1 92 MET 92 98 98 MET MET B . n B 1 93 VAL 93 99 99 VAL VAL B . n B 1 94 ASN 94 100 100 ASN ASN B . n B 1 95 GLU 95 101 101 GLU GLU B . n B 1 96 ALA 96 102 102 ALA ALA B . n B 1 97 LYS 97 103 103 LYS LYS B . n B 1 98 VAL 98 104 104 VAL VAL B . n B 1 99 ARG 99 105 105 ARG ARG B . n B 1 100 GLN 100 106 106 GLN GLN B . n B 1 101 GLY 101 107 107 GLY GLY B . n B 1 102 LEU 102 108 108 LEU LEU B . n B 1 103 ALA 103 109 109 ALA ALA B . n B 1 104 LYS 104 110 110 LYS LYS B . n B 1 105 VAL 105 111 111 VAL VAL B . n B 1 106 ALA 106 112 112 ALA ALA B . n B 1 107 TYR 107 113 113 TYR TYR B . n B 1 108 VAL 108 114 114 VAL VAL B . n B 1 109 TYR 109 115 115 TYR TYR B . n B 1 110 LYS 110 116 116 LYS LYS B . n B 1 111 GLY 111 117 117 GLY GLY B . n B 1 112 ASN 112 118 118 ASN ASN B . n B 1 113 ASN 113 119 119 ASN ASN B . n B 1 114 THR 114 120 120 THR THR B . n B 1 115 HIS 115 121 121 HIS HIS B . n B 1 116 GLU 116 122 122 GLU GLU B . n B 1 117 GLN 117 123 123 GLN GLN B . n B 1 118 LEU 118 124 124 LEU LEU B . n B 1 119 LEU 119 125 125 LEU LEU B . n B 1 120 ARG 120 126 126 ARG ARG B . n B 1 121 LYS 121 127 127 LYS LYS B . n B 1 122 ALA 122 128 128 ALA ALA B . n B 1 123 GLU 123 129 129 GLU GLU B . n B 1 124 ALA 124 130 130 ALA ALA B . n B 1 125 GLN 125 131 131 GLN GLN B . n B 1 126 ALA 126 132 132 ALA ALA B . n B 1 127 LYS 127 133 133 LYS LYS B . n B 1 128 LYS 128 134 134 LYS LYS B . n B 1 129 GLU 129 135 135 GLU GLU B . n B 1 130 LYS 130 136 136 LYS LYS B . n B 1 131 LEU 131 137 137 LEU LEU B . n B 1 132 ASN 132 138 138 ASN ASN B . n B 1 133 ILE 133 139 139 ILE ILE B . n B 1 134 TRP 134 140 140 TRP TRP B . n B 1 135 SER 135 141 141 SER SER B . n B 1 136 GLU 136 142 ? ? ? B . n B 1 137 ASP 137 143 ? ? ? B . n B 1 138 ASN 138 144 ? ? ? B . n B 1 139 ALA 139 145 ? ? ? B . n B 1 140 ASP 140 146 ? ? ? B . n B 1 141 SER 141 147 ? ? ? B . n B 1 142 GLY 142 148 ? ? ? B . n B 1 143 GLN 143 149 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 THP 1 150 1 THP THP A . D 3 CA 1 151 1 CA CA A . E 2 THP 1 150 1 THP THP B . F 3 CA 1 151 1 CA CA B . G 4 HOH 1 152 1 HOH HOH A . G 4 HOH 2 153 7 HOH HOH A . G 4 HOH 3 154 8 HOH HOH A . G 4 HOH 4 155 9 HOH HOH A . G 4 HOH 5 156 17 HOH HOH A . G 4 HOH 6 157 18 HOH HOH A . G 4 HOH 7 158 20 HOH HOH A . G 4 HOH 8 159 21 HOH HOH A . G 4 HOH 9 160 22 HOH HOH A . G 4 HOH 10 161 28 HOH HOH A . G 4 HOH 11 162 33 HOH HOH A . G 4 HOH 12 163 35 HOH HOH A . G 4 HOH 13 164 38 HOH HOH A . G 4 HOH 14 165 39 HOH HOH A . G 4 HOH 15 166 41 HOH HOH A . G 4 HOH 16 167 42 HOH HOH A . G 4 HOH 17 168 43 HOH HOH A . G 4 HOH 18 169 44 HOH HOH A . G 4 HOH 19 170 45 HOH HOH A . G 4 HOH 20 171 48 HOH HOH A . G 4 HOH 21 172 49 HOH HOH A . G 4 HOH 22 173 50 HOH HOH A . G 4 HOH 23 174 51 HOH HOH A . G 4 HOH 24 175 55 HOH HOH A . G 4 HOH 25 176 56 HOH HOH A . G 4 HOH 26 177 57 HOH HOH A . G 4 HOH 27 178 59 HOH HOH A . G 4 HOH 28 179 60 HOH HOH A . G 4 HOH 29 180 61 HOH HOH A . G 4 HOH 30 181 64 HOH HOH A . G 4 HOH 31 182 65 HOH HOH A . G 4 HOH 32 183 68 HOH HOH A . G 4 HOH 33 184 69 HOH HOH A . G 4 HOH 34 185 70 HOH HOH A . G 4 HOH 35 186 72 HOH HOH A . G 4 HOH 36 187 73 HOH HOH A . G 4 HOH 37 188 74 HOH HOH A . G 4 HOH 38 189 75 HOH HOH A . G 4 HOH 39 190 78 HOH HOH A . G 4 HOH 40 191 80 HOH HOH A . G 4 HOH 41 192 83 HOH HOH A . G 4 HOH 42 193 85 HOH HOH A . G 4 HOH 43 194 86 HOH HOH A . G 4 HOH 44 195 87 HOH HOH A . G 4 HOH 45 196 88 HOH HOH A . G 4 HOH 46 197 90 HOH HOH A . G 4 HOH 47 198 93 HOH HOH A . G 4 HOH 48 199 95 HOH HOH A . G 4 HOH 49 200 97 HOH HOH A . G 4 HOH 50 201 99 HOH HOH A . G 4 HOH 51 202 100 HOH HOH A . G 4 HOH 52 203 101 HOH HOH A . G 4 HOH 53 204 102 HOH HOH A . G 4 HOH 54 205 103 HOH HOH A . G 4 HOH 55 206 104 HOH HOH A . G 4 HOH 56 207 105 HOH HOH A . G 4 HOH 57 208 106 HOH HOH A . G 4 HOH 58 209 107 HOH HOH A . G 4 HOH 59 210 108 HOH HOH A . G 4 HOH 60 211 122 HOH HOH A . G 4 HOH 61 212 123 HOH HOH A . G 4 HOH 62 213 124 HOH HOH A . G 4 HOH 63 214 125 HOH HOH A . G 4 HOH 64 215 126 HOH HOH A . G 4 HOH 65 216 127 HOH HOH A . G 4 HOH 66 217 128 HOH HOH A . G 4 HOH 67 218 129 HOH HOH A . G 4 HOH 68 219 130 HOH HOH A . G 4 HOH 69 220 131 HOH HOH A . G 4 HOH 70 221 132 HOH HOH A . G 4 HOH 71 222 133 HOH HOH A . G 4 HOH 72 223 134 HOH HOH A . G 4 HOH 73 224 135 HOH HOH A . G 4 HOH 74 225 136 HOH HOH A . G 4 HOH 75 226 137 HOH HOH A . G 4 HOH 76 227 138 HOH HOH A . H 4 HOH 1 152 2 HOH HOH B . H 4 HOH 2 153 3 HOH HOH B . H 4 HOH 3 154 4 HOH HOH B . H 4 HOH 4 155 5 HOH HOH B . H 4 HOH 5 156 6 HOH HOH B . H 4 HOH 6 157 10 HOH HOH B . H 4 HOH 7 158 11 HOH HOH B . H 4 HOH 8 159 12 HOH HOH B . H 4 HOH 9 160 13 HOH HOH B . H 4 HOH 10 161 14 HOH HOH B . H 4 HOH 11 162 15 HOH HOH B . H 4 HOH 12 163 16 HOH HOH B . H 4 HOH 13 164 19 HOH HOH B . H 4 HOH 14 165 23 HOH HOH B . H 4 HOH 15 166 24 HOH HOH B . H 4 HOH 16 167 25 HOH HOH B . H 4 HOH 17 168 26 HOH HOH B . H 4 HOH 18 169 27 HOH HOH B . H 4 HOH 19 170 29 HOH HOH B . H 4 HOH 20 171 30 HOH HOH B . H 4 HOH 21 172 31 HOH HOH B . H 4 HOH 22 173 32 HOH HOH B . H 4 HOH 23 174 34 HOH HOH B . H 4 HOH 24 175 36 HOH HOH B . H 4 HOH 25 176 37 HOH HOH B . H 4 HOH 26 177 40 HOH HOH B . H 4 HOH 27 178 46 HOH HOH B . H 4 HOH 28 179 47 HOH HOH B . H 4 HOH 29 180 52 HOH HOH B . H 4 HOH 30 181 53 HOH HOH B . H 4 HOH 31 182 54 HOH HOH B . H 4 HOH 32 183 58 HOH HOH B . H 4 HOH 33 184 62 HOH HOH B . H 4 HOH 34 185 63 HOH HOH B . H 4 HOH 35 186 66 HOH HOH B . H 4 HOH 36 187 67 HOH HOH B . H 4 HOH 37 188 71 HOH HOH B . H 4 HOH 38 189 76 HOH HOH B . H 4 HOH 39 190 77 HOH HOH B . H 4 HOH 40 191 79 HOH HOH B . H 4 HOH 41 192 81 HOH HOH B . H 4 HOH 42 193 82 HOH HOH B . H 4 HOH 43 194 84 HOH HOH B . H 4 HOH 44 195 89 HOH HOH B . H 4 HOH 45 196 91 HOH HOH B . H 4 HOH 46 197 92 HOH HOH B . H 4 HOH 47 198 94 HOH HOH B . H 4 HOH 48 199 96 HOH HOH B . H 4 HOH 49 200 98 HOH HOH B . H 4 HOH 50 201 109 HOH HOH B . H 4 HOH 51 202 110 HOH HOH B . H 4 HOH 52 203 111 HOH HOH B . H 4 HOH 53 204 112 HOH HOH B . H 4 HOH 54 205 113 HOH HOH B . H 4 HOH 55 206 114 HOH HOH B . H 4 HOH 56 207 115 HOH HOH B . H 4 HOH 57 208 116 HOH HOH B . H 4 HOH 58 209 117 HOH HOH B . H 4 HOH 59 210 118 HOH HOH B . H 4 HOH 60 211 119 HOH HOH B . H 4 HOH 61 212 120 HOH HOH B . H 4 HOH 62 213 121 HOH HOH B . H 4 HOH 63 214 139 HOH HOH B . H 4 HOH 64 215 140 HOH HOH B . H 4 HOH 65 216 141 HOH HOH B . H 4 HOH 66 217 142 HOH HOH B . H 4 HOH 67 218 143 HOH HOH B . H 4 HOH 68 219 144 HOH HOH B . H 4 HOH 69 220 145 HOH HOH B . H 4 HOH 70 221 146 HOH HOH B . H 4 HOH 71 222 147 HOH HOH B . H 4 HOH 72 223 148 HOH HOH B . H 4 HOH 73 224 149 HOH HOH B . H 4 HOH 74 225 150 HOH HOH B . H 4 HOH 75 226 151 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G 2 1 B,E,F,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-11-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.859 _diffrn_reflns.pdbx_d_res_low ? _diffrn_reflns.pdbx_number_obs 24053 _diffrn_reflns.pdbx_Rmerge_I_obs ? _diffrn_reflns.pdbx_Rsym_value 0.103 _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI 19.83 _diffrn_reflns.pdbx_redundancy 5.05 _diffrn_reflns.pdbx_percent_possible_obs 97.65 _diffrn_reflns.number 121434 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.01 60.95 ? ? ? 0.080 ? ? ? 1 3.18 4.01 ? ? ? 0.088 ? ? ? 1 2.78 3.18 ? ? ? 0.105 ? ? ? 1 2.52 2.78 ? ? ? 0.129 ? ? ? 1 2.34 2.52 ? ? ? 0.141 ? ? ? 1 2.20 2.34 ? ? ? 0.173 ? ? ? 1 2.09 2.20 ? ? ? 0.189 ? ? ? 1 2.00 2.09 ? ? ? 0.234 ? ? ? 1 1.92 2.00 ? ? ? 0.305 ? ? ? 1 1.86 1.92 ? ? ? 0.362 ? ? ? # _pdbx_phasing_MR.entry_id 3E5S _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 47.720 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 60.950 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 60.950 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SAINT . ? package ? ? 'data scaling' http://www.bruker-axs.de/ ? ? 1 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 2 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 APEX . ? ? ? ? 'data collection' ? ? ? 5 SAINT . ? ? ? ? 'data reduction' ? ? ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 138 ? ? 37.83 -116.34 2 1 ASN B 138 ? ? 50.61 -111.90 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A LYS 6 ? A LYS 6 7 1 Y 1 A GLU 142 ? A GLU 136 8 1 Y 1 A ASP 143 ? A ASP 137 9 1 Y 1 A ASN 144 ? A ASN 138 10 1 Y 1 A ALA 145 ? A ALA 139 11 1 Y 1 A ASP 146 ? A ASP 140 12 1 Y 1 A SER 147 ? A SER 141 13 1 Y 1 A GLY 148 ? A GLY 142 14 1 Y 1 A GLN 149 ? A GLN 143 15 1 Y 1 B ALA 1 ? B ALA 1 16 1 Y 1 B THR 2 ? B THR 2 17 1 Y 1 B SER 3 ? B SER 3 18 1 Y 1 B THR 4 ? B THR 4 19 1 Y 1 B LYS 5 ? B LYS 5 20 1 Y 1 B LYS 6 ? B LYS 6 21 1 Y 1 B GLU 142 ? B GLU 136 22 1 Y 1 B ASP 143 ? B ASP 137 23 1 Y 1 B ASN 144 ? B ASN 138 24 1 Y 1 B ALA 145 ? B ALA 139 25 1 Y 1 B ASP 146 ? B ASP 140 26 1 Y 1 B SER 147 ? B SER 141 27 1 Y 1 B GLY 148 ? B GLY 142 28 1 Y 1 B GLN 149 ? B GLN 143 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 HIS N N N N 124 HIS CA C N S 125 HIS C C N N 126 HIS O O N N 127 HIS CB C N N 128 HIS CG C Y N 129 HIS ND1 N Y N 130 HIS CD2 C Y N 131 HIS CE1 C Y N 132 HIS NE2 N Y N 133 HIS OXT O N N 134 HIS H H N N 135 HIS H2 H N N 136 HIS HA H N N 137 HIS HB2 H N N 138 HIS HB3 H N N 139 HIS HD1 H N N 140 HIS HD2 H N N 141 HIS HE1 H N N 142 HIS HE2 H N N 143 HIS HXT H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 ILE N N N N 148 ILE CA C N S 149 ILE C C N N 150 ILE O O N N 151 ILE CB C N S 152 ILE CG1 C N N 153 ILE CG2 C N N 154 ILE CD1 C N N 155 ILE OXT O N N 156 ILE H H N N 157 ILE H2 H N N 158 ILE HA H N N 159 ILE HB H N N 160 ILE HG12 H N N 161 ILE HG13 H N N 162 ILE HG21 H N N 163 ILE HG22 H N N 164 ILE HG23 H N N 165 ILE HD11 H N N 166 ILE HD12 H N N 167 ILE HD13 H N N 168 ILE HXT H N N 169 LEU N N N N 170 LEU CA C N S 171 LEU C C N N 172 LEU O O N N 173 LEU CB C N N 174 LEU CG C N N 175 LEU CD1 C N N 176 LEU CD2 C N N 177 LEU OXT O N N 178 LEU H H N N 179 LEU H2 H N N 180 LEU HA H N N 181 LEU HB2 H N N 182 LEU HB3 H N N 183 LEU HG H N N 184 LEU HD11 H N N 185 LEU HD12 H N N 186 LEU HD13 H N N 187 LEU HD21 H N N 188 LEU HD22 H N N 189 LEU HD23 H N N 190 LEU HXT H N N 191 LYS N N N N 192 LYS CA C N S 193 LYS C C N N 194 LYS O O N N 195 LYS CB C N N 196 LYS CG C N N 197 LYS CD C N N 198 LYS CE C N N 199 LYS NZ N N N 200 LYS OXT O N N 201 LYS H H N N 202 LYS H2 H N N 203 LYS HA H N N 204 LYS HB2 H N N 205 LYS HB3 H N N 206 LYS HG2 H N N 207 LYS HG3 H N N 208 LYS HD2 H N N 209 LYS HD3 H N N 210 LYS HE2 H N N 211 LYS HE3 H N N 212 LYS HZ1 H N N 213 LYS HZ2 H N N 214 LYS HZ3 H N N 215 LYS HXT H N N 216 MET N N N N 217 MET CA C N S 218 MET C C N N 219 MET O O N N 220 MET CB C N N 221 MET CG C N N 222 MET SD S N N 223 MET CE C N N 224 MET OXT O N N 225 MET H H N N 226 MET H2 H N N 227 MET HA H N N 228 MET HB2 H N N 229 MET HB3 H N N 230 MET HG2 H N N 231 MET HG3 H N N 232 MET HE1 H N N 233 MET HE2 H N N 234 MET HE3 H N N 235 MET HXT H N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 THP P2 P N N 291 THP O4P O N N 292 THP O5P O N N 293 THP O6P O N N 294 THP P1 P N N 295 THP O1P O N N 296 THP O2P O N N 297 THP O3P O N N 298 THP "O5'" O N N 299 THP "C5'" C N N 300 THP "C4'" C N R 301 THP "O4'" O N N 302 THP "C3'" C N S 303 THP "O3'" O N N 304 THP "C2'" C N N 305 THP "C1'" C N R 306 THP N1 N N N 307 THP C2 C N N 308 THP O2 O N N 309 THP N3 N N N 310 THP C4 C N N 311 THP O4 O N N 312 THP C5 C N N 313 THP C5M C N N 314 THP C6 C N N 315 THP HOP5 H N N 316 THP HOP6 H N N 317 THP HOP2 H N N 318 THP HOP3 H N N 319 THP "H5'1" H N N 320 THP "H5'2" H N N 321 THP "H4'" H N N 322 THP "H3'" H N N 323 THP "H2'1" H N N 324 THP "H2'2" H N N 325 THP "H1'" H N N 326 THP H3 H N N 327 THP H51 H N N 328 THP H52 H N N 329 THP H53 H N N 330 THP H6 H N N 331 THR N N N N 332 THR CA C N S 333 THR C C N N 334 THR O O N N 335 THR CB C N R 336 THR OG1 O N N 337 THR CG2 C N N 338 THR OXT O N N 339 THR H H N N 340 THR H2 H N N 341 THR HA H N N 342 THR HB H N N 343 THR HG1 H N N 344 THR HG21 H N N 345 THR HG22 H N N 346 THR HG23 H N N 347 THR HXT H N N 348 TRP N N N N 349 TRP CA C N S 350 TRP C C N N 351 TRP O O N N 352 TRP CB C N N 353 TRP CG C Y N 354 TRP CD1 C Y N 355 TRP CD2 C Y N 356 TRP NE1 N Y N 357 TRP CE2 C Y N 358 TRP CE3 C Y N 359 TRP CZ2 C Y N 360 TRP CZ3 C Y N 361 TRP CH2 C Y N 362 TRP OXT O N N 363 TRP H H N N 364 TRP H2 H N N 365 TRP HA H N N 366 TRP HB2 H N N 367 TRP HB3 H N N 368 TRP HD1 H N N 369 TRP HE1 H N N 370 TRP HE3 H N N 371 TRP HZ2 H N N 372 TRP HZ3 H N N 373 TRP HH2 H N N 374 TRP HXT H N N 375 TYR N N N N 376 TYR CA C N S 377 TYR C C N N 378 TYR O O N N 379 TYR CB C N N 380 TYR CG C Y N 381 TYR CD1 C Y N 382 TYR CD2 C Y N 383 TYR CE1 C Y N 384 TYR CE2 C Y N 385 TYR CZ C Y N 386 TYR OH O N N 387 TYR OXT O N N 388 TYR H H N N 389 TYR H2 H N N 390 TYR HA H N N 391 TYR HB2 H N N 392 TYR HB3 H N N 393 TYR HD1 H N N 394 TYR HD2 H N N 395 TYR HE1 H N N 396 TYR HE2 H N N 397 TYR HH H N N 398 TYR HXT H N N 399 VAL N N N N 400 VAL CA C N S 401 VAL C C N N 402 VAL O O N N 403 VAL CB C N N 404 VAL CG1 C N N 405 VAL CG2 C N N 406 VAL OXT O N N 407 VAL H H N N 408 VAL H2 H N N 409 VAL HA H N N 410 VAL HB H N N 411 VAL HG11 H N N 412 VAL HG12 H N N 413 VAL HG13 H N N 414 VAL HG21 H N N 415 VAL HG22 H N N 416 VAL HG23 H N N 417 VAL HXT H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THP P2 O4P doub N N 277 THP P2 O5P sing N N 278 THP P2 O6P sing N N 279 THP P2 "O5'" sing N N 280 THP O5P HOP5 sing N N 281 THP O6P HOP6 sing N N 282 THP P1 O1P doub N N 283 THP P1 O2P sing N N 284 THP P1 O3P sing N N 285 THP P1 "O3'" sing N N 286 THP O2P HOP2 sing N N 287 THP O3P HOP3 sing N N 288 THP "O5'" "C5'" sing N N 289 THP "C5'" "C4'" sing N N 290 THP "C5'" "H5'1" sing N N 291 THP "C5'" "H5'2" sing N N 292 THP "C4'" "O4'" sing N N 293 THP "C4'" "C3'" sing N N 294 THP "C4'" "H4'" sing N N 295 THP "O4'" "C1'" sing N N 296 THP "C3'" "O3'" sing N N 297 THP "C3'" "C2'" sing N N 298 THP "C3'" "H3'" sing N N 299 THP "C2'" "C1'" sing N N 300 THP "C2'" "H2'1" sing N N 301 THP "C2'" "H2'2" sing N N 302 THP "C1'" N1 sing N N 303 THP "C1'" "H1'" sing N N 304 THP N1 C2 sing N N 305 THP N1 C6 sing N N 306 THP C2 O2 doub N N 307 THP C2 N3 sing N N 308 THP N3 C4 sing N N 309 THP N3 H3 sing N N 310 THP C4 O4 doub N N 311 THP C4 C5 sing N N 312 THP C5 C5M sing N N 313 THP C5 C6 doub N N 314 THP C5M H51 sing N N 315 THP C5M H52 sing N N 316 THP C5M H53 sing N N 317 THP C6 H6 sing N N 318 THR N CA sing N N 319 THR N H sing N N 320 THR N H2 sing N N 321 THR CA C sing N N 322 THR CA CB sing N N 323 THR CA HA sing N N 324 THR C O doub N N 325 THR C OXT sing N N 326 THR CB OG1 sing N N 327 THR CB CG2 sing N N 328 THR CB HB sing N N 329 THR OG1 HG1 sing N N 330 THR CG2 HG21 sing N N 331 THR CG2 HG22 sing N N 332 THR CG2 HG23 sing N N 333 THR OXT HXT sing N N 334 TRP N CA sing N N 335 TRP N H sing N N 336 TRP N H2 sing N N 337 TRP CA C sing N N 338 TRP CA CB sing N N 339 TRP CA HA sing N N 340 TRP C O doub N N 341 TRP C OXT sing N N 342 TRP CB CG sing N N 343 TRP CB HB2 sing N N 344 TRP CB HB3 sing N N 345 TRP CG CD1 doub Y N 346 TRP CG CD2 sing Y N 347 TRP CD1 NE1 sing Y N 348 TRP CD1 HD1 sing N N 349 TRP CD2 CE2 doub Y N 350 TRP CD2 CE3 sing Y N 351 TRP NE1 CE2 sing Y N 352 TRP NE1 HE1 sing N N 353 TRP CE2 CZ2 sing Y N 354 TRP CE3 CZ3 doub Y N 355 TRP CE3 HE3 sing N N 356 TRP CZ2 CH2 doub Y N 357 TRP CZ2 HZ2 sing N N 358 TRP CZ3 CH2 sing Y N 359 TRP CZ3 HZ3 sing N N 360 TRP CH2 HH2 sing N N 361 TRP OXT HXT sing N N 362 TYR N CA sing N N 363 TYR N H sing N N 364 TYR N H2 sing N N 365 TYR CA C sing N N 366 TYR CA CB sing N N 367 TYR CA HA sing N N 368 TYR C O doub N N 369 TYR C OXT sing N N 370 TYR CB CG sing N N 371 TYR CB HB2 sing N N 372 TYR CB HB3 sing N N 373 TYR CG CD1 doub Y N 374 TYR CG CD2 sing Y N 375 TYR CD1 CE1 sing Y N 376 TYR CD1 HD1 sing N N 377 TYR CD2 CE2 doub Y N 378 TYR CD2 HD2 sing N N 379 TYR CE1 CZ doub Y N 380 TYR CE1 HE1 sing N N 381 TYR CE2 CZ sing Y N 382 TYR CE2 HE2 sing N N 383 TYR CZ OH sing N N 384 TYR OH HH sing N N 385 TYR OXT HXT sing N N 386 VAL N CA sing N N 387 VAL N H sing N N 388 VAL N H2 sing N N 389 VAL CA C sing N N 390 VAL CA CB sing N N 391 VAL CA HA sing N N 392 VAL C O doub N N 393 VAL C OXT sing N N 394 VAL CB CG1 sing N N 395 VAL CB CG2 sing N N 396 VAL CB HB sing N N 397 VAL CG1 HG11 sing N N 398 VAL CG1 HG12 sing N N 399 VAL CG1 HG13 sing N N 400 VAL CG2 HG21 sing N N 401 VAL CG2 HG22 sing N N 402 VAL CG2 HG23 sing N N 403 VAL OXT HXT sing N N 404 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "THYMIDINE-3',5'-DIPHOSPHATE" THP 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3BDC _pdbx_initial_refinement_model.details 3BDC.PDB #