data_3GBQ # _entry.id 3GBQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GBQ pdb_00003gbq 10.2210/pdb3gbq/pdb WWPDB D_1000178977 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4GBQ _pdbx_database_related.details . _pdbx_database_related.content_type ensemble # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GBQ _pdbx_database_status.recvd_initial_deposition_date 1996-12-23 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wittekind, M.' 1 'Mapelli, C.' 2 'Lee, V.' 3 'Goldfarb, V.' 4 'Friedrichs, M.S.' 5 'Meyers, C.A.' 6 'Mueller, L.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Solution structure of the Grb2 N-terminal SH3 domain complexed with a ten-residue peptide derived from SOS: direct refinement against NOEs, J-couplings and 1H and 13C chemical shifts. ; J.Mol.Biol. 267 933 952 1997 JMOBAK UK 0022-2836 0070 ? 9135122 10.1006/jmbi.1996.0886 1 'Orientation of Peptide Fragments from SOS Proteins Bound to the N-Terminal SH3 Domain of Grb2 Determined by NMR Spectroscopy' Biochemistry 33 13531 ? 1994 BICHAW US 0006-2960 0033 ? ? ? 2 ;Molecular Cloning of the Mouse Grb2 Gene: Differential Interaction of the Grb2 Adaptor Protein with Epidermal Growth Factor and Nerve Growth Factor Receptors ; Mol.Cell.Biol. 13 5500 ? 1993 MCEBD4 US 0270-7306 2044 ? ? ? 3 'Identification of Murine Homologues of the Drosophila Son of Sevenless Gene: Potential Activators of Ras' Proc.Natl.Acad.Sci.USA 89 6511 ? 1992 PNASA6 US 0027-8424 0040 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wittekind, M.' 1 ? primary 'Mapelli, C.' 2 ? primary 'Lee, V.' 3 ? primary 'Goldfarb, V.' 4 ? primary 'Friedrichs, M.S.' 5 ? primary 'Meyers, C.A.' 6 ? primary 'Mueller, L.' 7 ? 1 'Wittekind, M.' 8 ? 1 'Mapelli, C.' 9 ? 1 'Farmer II, B.T.' 10 ? 1 'Suen, K.L.' 11 ? 1 'Goldfarb, V.' 12 ? 1 'Tsao, J.' 13 ? 1 'Lavoie, T.' 14 ? 1 'Barbacid, M.' 15 ? 1 'Meyers, C.A.' 16 ? 1 'Mueller, L.' 17 ? 2 'Suen, K.L.' 18 ? 2 'Bustelo, X.R.' 19 ? 2 'Pawson, T.' 20 ? 2 'Barbacid, M.' 21 ? 3 'Bowtell, D.' 22 ? 3 'Fu, P.' 23 ? 3 'Simon, M.' 24 ? 3 'Senior, P.' 25 ? # _cell.entry_id 3GBQ _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GBQ _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man GRB2 8454.495 1 ? ? 'N-TERMINAL SH3 DOMAIN' ? 2 polymer man SOS-1 1197.478 1 ? ? 'RESIDUES 1135 - 1144' ? # _entity_name_com.entity_id 2 _entity_name_com.name AC-VPPPVPPRRR-NH2 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GSRRASVGSMEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPEFIVTD GSRRASVGSMEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPEFIVTD A ? 2 'polypeptide(L)' no yes '(ACE)VPPPVPPRRR(NH2)' XVPPPVPPRRRX B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ARG n 1 4 ARG n 1 5 ALA n 1 6 SER n 1 7 VAL n 1 8 GLY n 1 9 SER n 1 10 MET n 1 11 GLU n 1 12 ALA n 1 13 ILE n 1 14 ALA n 1 15 LYS n 1 16 TYR n 1 17 ASP n 1 18 PHE n 1 19 LYS n 1 20 ALA n 1 21 THR n 1 22 ALA n 1 23 ASP n 1 24 ASP n 1 25 GLU n 1 26 LEU n 1 27 SER n 1 28 PHE n 1 29 LYS n 1 30 ARG n 1 31 GLY n 1 32 ASP n 1 33 ILE n 1 34 LEU n 1 35 LYS n 1 36 VAL n 1 37 LEU n 1 38 ASN n 1 39 GLU n 1 40 GLU n 1 41 CYS n 1 42 ASP n 1 43 GLN n 1 44 ASN n 1 45 TRP n 1 46 TYR n 1 47 LYS n 1 48 ALA n 1 49 GLU n 1 50 LEU n 1 51 ASN n 1 52 GLY n 1 53 LYS n 1 54 ASP n 1 55 GLY n 1 56 PHE n 1 57 ILE n 1 58 PRO n 1 59 LYS n 1 60 ASN n 1 61 TYR n 1 62 ILE n 1 63 GLU n 1 64 MET n 1 65 LYS n 1 66 PRO n 1 67 HIS n 1 68 PRO n 1 69 GLU n 1 70 PHE n 1 71 ILE n 1 72 VAL n 1 73 THR n 1 74 ASP n 2 1 ACE n 2 2 VAL n 2 3 PRO n 2 4 PRO n 2 5 PRO n 2 6 VAL n 2 7 PRO n 2 8 PRO n 2 9 ARG n 2 10 ARG n 2 11 ARG n 2 12 NH2 n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'house mouse' Mus POTENTIAL ? BALB/C ? ? ? ? 'Mus musculus' 10090 ? BL21 ? ? ? ? CYTOPLASMIC ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21 (DE3)' ? ? ? ? ? ? ? PLASMID 'PGTX-2T (PHARMACIA)' ? ? BL21 ? ? 2 1 sample ? ? ? 'house mouse' Mus ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? CYTOPLASM ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP GRB2_MOUSE Q60631 1 1 ? ? 2 UNP SOS1_MOUSE Q62245 2 1135 ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GBQ A 10 ? 70 ? Q60631 1 ? 61 ? 1 61 2 2 3GBQ B 2 ? 11 ? Q62245 1135 ? 1144 ? 1 10 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3GBQ _struct_ref_seq_dif.mon_id GLU _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 69 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q60631 _struct_ref_seq_dif.db_mon_id TRP _struct_ref_seq_dif.pdbx_seq_db_seq_num 60 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 60 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _pdbx_nmr_exptl.experiment_id 1 _pdbx_nmr_exptl.conditions_id 1 _pdbx_nmr_exptl.type 'SEE JOURNAL ARTICLE' _pdbx_nmr_exptl.solution_id 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298. _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model UNITYPLUS _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 3GBQ _pdbx_nmr_refine.method 'DG, SA' _pdbx_nmr_refine.details ;TWO ENSEMBLES WERE CALCULATED. BOTH USED THE SAME SET OF NOE/ANGLE/J-COUPLING RESTRAINTS, BUT THEY DIFFER IN THAT THE ENSEMBLE ALSO OF THIS ENTRY AND ENTRY 4GBQ INCLUDED 1H AND 13C CHEMICAL SHIFTS AS RESTRAINTS ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 3GBQ _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR ? BRUNGER 1 'structure solution' X-PLOR ? ? 2 # _exptl.entry_id 3GBQ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 3GBQ _struct.title ;SOLUTION NMR STRUCTURE OF THE GRB2 N-TERMINAL SH3 DOMAIN COMPLEXED WITH A TEN-RESIDUE PEPTIDE DERIVED FROM SOS DIRECT REFINEMENT AGAINST NOES, J-COUPLINGS, AND 1H AND 13C CHEMICAL SHIFTS, MINIMIZED AVERAGE STRUCTURE ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GBQ _struct_keywords.pdbx_keywords 'COMPLEX (SIGNAL TRANSDUCTION/PEPTIDE)' _struct_keywords.text 'COMPLEX (SIGNAL TRANSDUCTION-PEPTIDE), SH3 DOMAIN, COMPLEX (SIGNAL TRANSDUCTION-PEPTIDE) complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 59 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id TYR _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 61 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 50 _struct_conf.end_auth_comp_id TYR _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 52 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ACE 1 C ? ? ? 1_555 B VAL 2 N ? ? B ACE 0 B VAL 1 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale2 covale both ? B ARG 11 C ? ? ? 1_555 B NH2 12 N ? ? B ARG 10 B NH2 11 1_555 ? ? ? ? ? ? ? 1.360 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 33 ? LYS A 35 ? ILE A 24 LYS A 26 A 2 GLU A 11 ? ALA A 14 ? GLU A 2 ALA A 5 A 3 ILE A 62 ? LYS A 65 ? ILE A 53 LYS A 56 B 1 TRP A 45 ? LEU A 50 ? TRP A 36 LEU A 41 B 2 LYS A 53 ? PRO A 58 ? LYS A 44 PRO A 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 34 ? O LEU A 25 N ALA A 12 ? N ALA A 3 A 2 3 O GLU A 11 ? O GLU A 2 N LYS A 65 ? N LYS A 56 B 1 2 O TYR A 46 ? O TYR A 37 N ILE A 57 ? N ILE A 48 # _struct_site.id AC2 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id NH2 _struct_site.pdbx_auth_seq_id 11 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE NH2 B 11' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC2 2 ARG B 10 ? ARG B 9 . ? 1_555 ? 2 AC2 2 ARG B 11 ? ARG B 10 . ? 1_555 ? # _database_PDB_matrix.entry_id 3GBQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3GBQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -8 ? ? ? A . n A 1 2 SER 2 -7 ? ? ? A . n A 1 3 ARG 3 -6 ? ? ? A . n A 1 4 ARG 4 -5 ? ? ? A . n A 1 5 ALA 5 -4 ? ? ? A . n A 1 6 SER 6 -3 ? ? ? A . n A 1 7 VAL 7 -2 ? ? ? A . n A 1 8 GLY 8 -1 ? ? ? A . n A 1 9 SER 9 0 ? ? ? A . n A 1 10 MET 10 1 1 MET MET A . n A 1 11 GLU 11 2 2 GLU GLU A . n A 1 12 ALA 12 3 3 ALA ALA A . n A 1 13 ILE 13 4 4 ILE ILE A . n A 1 14 ALA 14 5 5 ALA ALA A . n A 1 15 LYS 15 6 6 LYS LYS A . n A 1 16 TYR 16 7 7 TYR TYR A . n A 1 17 ASP 17 8 8 ASP ASP A . n A 1 18 PHE 18 9 9 PHE PHE A . n A 1 19 LYS 19 10 10 LYS LYS A . n A 1 20 ALA 20 11 11 ALA ALA A . n A 1 21 THR 21 12 12 THR THR A . n A 1 22 ALA 22 13 13 ALA ALA A . n A 1 23 ASP 23 14 14 ASP ASP A . n A 1 24 ASP 24 15 15 ASP ASP A . n A 1 25 GLU 25 16 16 GLU GLU A . n A 1 26 LEU 26 17 17 LEU LEU A . n A 1 27 SER 27 18 18 SER SER A . n A 1 28 PHE 28 19 19 PHE PHE A . n A 1 29 LYS 29 20 20 LYS LYS A . n A 1 30 ARG 30 21 21 ARG ARG A . n A 1 31 GLY 31 22 22 GLY GLY A . n A 1 32 ASP 32 23 23 ASP ASP A . n A 1 33 ILE 33 24 24 ILE ILE A . n A 1 34 LEU 34 25 25 LEU LEU A . n A 1 35 LYS 35 26 26 LYS LYS A . n A 1 36 VAL 36 27 27 VAL VAL A . n A 1 37 LEU 37 28 28 LEU LEU A . n A 1 38 ASN 38 29 29 ASN ASN A . n A 1 39 GLU 39 30 30 GLU GLU A . n A 1 40 GLU 40 31 31 GLU GLU A . n A 1 41 CYS 41 32 32 CYS CYS A . n A 1 42 ASP 42 33 33 ASP ASP A . n A 1 43 GLN 43 34 34 GLN GLN A . n A 1 44 ASN 44 35 35 ASN ASN A . n A 1 45 TRP 45 36 36 TRP TRP A . n A 1 46 TYR 46 37 37 TYR TYR A . n A 1 47 LYS 47 38 38 LYS LYS A . n A 1 48 ALA 48 39 39 ALA ALA A . n A 1 49 GLU 49 40 40 GLU GLU A . n A 1 50 LEU 50 41 41 LEU LEU A . n A 1 51 ASN 51 42 42 ASN ASN A . n A 1 52 GLY 52 43 43 GLY GLY A . n A 1 53 LYS 53 44 44 LYS LYS A . n A 1 54 ASP 54 45 45 ASP ASP A . n A 1 55 GLY 55 46 46 GLY GLY A . n A 1 56 PHE 56 47 47 PHE PHE A . n A 1 57 ILE 57 48 48 ILE ILE A . n A 1 58 PRO 58 49 49 PRO PRO A . n A 1 59 LYS 59 50 50 LYS LYS A . n A 1 60 ASN 60 51 51 ASN ASN A . n A 1 61 TYR 61 52 52 TYR TYR A . n A 1 62 ILE 62 53 53 ILE ILE A . n A 1 63 GLU 63 54 54 GLU GLU A . n A 1 64 MET 64 55 55 MET MET A . n A 1 65 LYS 65 56 56 LYS LYS A . n A 1 66 PRO 66 57 57 PRO PRO A . n A 1 67 HIS 67 58 ? ? ? A . n A 1 68 PRO 68 59 ? ? ? A . n A 1 69 GLU 69 60 ? ? ? A . n A 1 70 PHE 70 61 ? ? ? A . n A 1 71 ILE 71 62 ? ? ? A . n A 1 72 VAL 72 63 ? ? ? A . n A 1 73 THR 73 64 ? ? ? A . n A 1 74 ASP 74 65 ? ? ? A . n B 2 1 ACE 1 0 0 ACE ACE B . n B 2 2 VAL 2 1 1 VAL VAL B . n B 2 3 PRO 3 2 2 PRO PRO B . n B 2 4 PRO 4 3 3 PRO PRO B . n B 2 5 PRO 5 4 4 PRO PRO B . n B 2 6 VAL 6 5 5 VAL VAL B . n B 2 7 PRO 7 6 6 PRO PRO B . n B 2 8 PRO 8 7 7 PRO PRO B . n B 2 9 ARG 9 8 8 ARG ARG B . n B 2 10 ARG 10 9 9 ARG ARG B . n B 2 11 ARG 11 10 10 ARG ARG B . n B 2 12 NH2 12 11 11 NH2 NH2 B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-09-04 2 'Structure model' 1 1 2008-03-25 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 4 'Structure model' '_struct_ref_seq_dif.details' 16 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A CYS 32 ? ? CB A CYS 32 ? ? SG A CYS 32 ? ? 125.91 114.20 11.71 1.10 N 2 1 N A GLN 34 ? ? CA A GLN 34 ? ? CB A GLN 34 ? ? 97.70 110.60 -12.90 1.80 N 3 1 N B ARG 8 ? ? CA B ARG 8 ? ? CB B ARG 8 ? ? 121.65 110.60 11.05 1.80 N 4 1 CB B ARG 9 ? ? CA B ARG 9 ? ? C B ARG 9 ? ? 96.57 110.40 -13.83 2.00 N 5 1 NE B ARG 9 ? ? CZ B ARG 9 ? ? NH2 B ARG 9 ? ? 115.76 120.30 -4.54 0.50 N 6 1 CA B ARG 10 ? ? C B ARG 10 ? ? N B NH2 11 ? ? 103.25 117.20 -13.95 2.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 21 ? ? -48.00 102.33 2 1 LEU A 28 ? ? -101.61 74.63 3 1 ASN A 29 ? ? 95.89 152.76 4 1 GLU A 30 ? ? -169.14 77.30 5 1 GLU A 31 ? ? -164.45 78.56 6 1 CYS A 32 ? ? 178.01 -25.49 7 1 ASN A 35 ? ? 140.80 -17.58 8 1 LYS A 56 ? ? -150.21 75.59 9 1 ARG B 9 ? ? 101.01 108.22 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG B 9 ? ? 0.194 'SIDE CHAIN' 2 1 ARG B 10 ? ? 0.171 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -8 ? A GLY 1 2 1 Y 1 A SER -7 ? A SER 2 3 1 Y 1 A ARG -6 ? A ARG 3 4 1 Y 1 A ARG -5 ? A ARG 4 5 1 Y 1 A ALA -4 ? A ALA 5 6 1 Y 1 A SER -3 ? A SER 6 7 1 Y 1 A VAL -2 ? A VAL 7 8 1 Y 1 A GLY -1 ? A GLY 8 9 1 Y 1 A SER 0 ? A SER 9 10 1 Y 1 A HIS 58 ? A HIS 67 11 1 Y 1 A PRO 59 ? A PRO 68 12 1 Y 1 A GLU 60 ? A GLU 69 13 1 Y 1 A PHE 61 ? A PHE 70 14 1 Y 1 A ILE 62 ? A ILE 71 15 1 Y 1 A VAL 63 ? A VAL 72 16 1 Y 1 A THR 64 ? A THR 73 17 1 Y 1 A ASP 65 ? A ASP 74 #