data_3GKK # _entry.id 3GKK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3GKK RCSB RCSB051976 WWPDB D_1000051976 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3GKM . unspecified PDB 3GKN . unspecified # _pdbx_database_status.entry_id 3GKK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-03-11 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Liao, S.-J.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Insights into the alkyl peroxide reduction pathway of Xanthomonas campestris bacterioferritin comigratory protein from the trapped intermediate-ligand complex structures ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 390 _citation.page_first 951 _citation.page_last 966 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19477183 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.05.030 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Liao, S.-J.' 1 primary 'Yang, C.-Y.' 2 primary 'Chin, K.-H.' 3 primary 'Wang, A.H.-J.' 4 primary 'Chou, S.-H.' 5 # _cell.length_a 34.835 _cell.length_b 54.646 _cell.length_c 36.645 _cell.angle_alpha 90 _cell.angle_beta 108.23 _cell.angle_gamma 90 _cell.entry_id 3GKK _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3GKK _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 4 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bacterioferritin comigratory protein' 17572.027 1 1.11.1.15 ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 water nat water 18.015 135 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNAMTDAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKILGVSRDSV KSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH AKQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMTDAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKILGVSRDSV KSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH AKQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MET n 1 5 THR n 1 6 ASP n 1 7 ALA n 1 8 VAL n 1 9 LEU n 1 10 GLU n 1 11 LEU n 1 12 PRO n 1 13 ALA n 1 14 ALA n 1 15 THR n 1 16 PHE n 1 17 ASP n 1 18 LEU n 1 19 PRO n 1 20 LEU n 1 21 SER n 1 22 LEU n 1 23 SER n 1 24 GLY n 1 25 GLY n 1 26 THR n 1 27 GLN n 1 28 THR n 1 29 THR n 1 30 LEU n 1 31 ARG n 1 32 ALA n 1 33 HIS n 1 34 ALA n 1 35 GLY n 1 36 HIS n 1 37 TRP n 1 38 LEU n 1 39 VAL n 1 40 ILE n 1 41 TYR n 1 42 PHE n 1 43 TYR n 1 44 PRO n 1 45 LYS n 1 46 ASP n 1 47 SER n 1 48 THR n 1 49 PRO n 1 50 GLY n 1 51 CYS n 1 52 THR n 1 53 THR n 1 54 GLU n 1 55 GLY n 1 56 LEU n 1 57 ASP n 1 58 PHE n 1 59 ASN n 1 60 ALA n 1 61 LEU n 1 62 LEU n 1 63 PRO n 1 64 GLU n 1 65 PHE n 1 66 ASP n 1 67 LYS n 1 68 ALA n 1 69 GLY n 1 70 ALA n 1 71 LYS n 1 72 ILE n 1 73 LEU n 1 74 GLY n 1 75 VAL n 1 76 SER n 1 77 ARG n 1 78 ASP n 1 79 SER n 1 80 VAL n 1 81 LYS n 1 82 SER n 1 83 HIS n 1 84 ASP n 1 85 ASN n 1 86 PHE n 1 87 CYS n 1 88 ALA n 1 89 LYS n 1 90 GLN n 1 91 GLY n 1 92 PHE n 1 93 ALA n 1 94 PHE n 1 95 PRO n 1 96 LEU n 1 97 VAL n 1 98 SER n 1 99 ASP n 1 100 GLY n 1 101 ASP n 1 102 GLU n 1 103 ALA n 1 104 LEU n 1 105 CYS n 1 106 ARG n 1 107 ALA n 1 108 PHE n 1 109 ASP n 1 110 VAL n 1 111 ILE n 1 112 LYS n 1 113 GLU n 1 114 LYS n 1 115 ASN n 1 116 MET n 1 117 TYR n 1 118 GLY n 1 119 LYS n 1 120 GLN n 1 121 VAL n 1 122 LEU n 1 123 GLY n 1 124 ILE n 1 125 GLU n 1 126 ARG n 1 127 SER n 1 128 THR n 1 129 PHE n 1 130 LEU n 1 131 LEU n 1 132 SER n 1 133 PRO n 1 134 GLU n 1 135 GLY n 1 136 GLN n 1 137 VAL n 1 138 VAL n 1 139 GLN n 1 140 ALA n 1 141 TRP n 1 142 ARG n 1 143 LYS n 1 144 VAL n 1 145 LYS n 1 146 VAL n 1 147 ALA n 1 148 GLY n 1 149 HIS n 1 150 ALA n 1 151 ASP n 1 152 ALA n 1 153 VAL n 1 154 LEU n 1 155 ALA n 1 156 ALA n 1 157 LEU n 1 158 LYS n 1 159 ALA n 1 160 HIS n 1 161 ALA n 1 162 LYS n 1 163 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BCP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 17 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Xanthomonas campestris pv. campestris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 340 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8P9V9_XANCP _struct_ref.pdbx_db_accession Q8P9V9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTDAVLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKILGVSRDSVKSH DNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAHAKQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GKK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 163 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8P9V9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 160 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 160 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GKK SER A 1 ? UNP Q8P9V9 ? ? 'EXPRESSION TAG' -2 1 1 3GKK ASN A 2 ? UNP Q8P9V9 ? ? 'EXPRESSION TAG' -1 2 1 3GKK ALA A 3 ? UNP Q8P9V9 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3GKK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_percent_sol 34.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2mM DTT, 2M AMMONIUM SULPHATE, 0.2M NaCl, 0.1M CACODYLATE, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'ADSC QUANTUM 210' 2008-11-20 ? 2 CCD 'ADSC QUANTUM 4r' 2008-08-02 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 2 ? ? MAD x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97622 1.0 2 0.96370 1.0 3 0.97890 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'NSRRC BEAMLINE BL13C1' NSRRC BL13C1 ? 0.97622 2 SYNCHROTRON 'SPRING-8 BEAMLINE BL12B2' SPring-8 BL12B2 ? '0.96370, 0.97890' # _reflns.entry_id 3GKK _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 1.830 _reflns.number_obs 11378 _reflns.number_all ? _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.08500 _reflns.pdbx_Rsym_value 0.08500 _reflns.pdbx_netI_over_sigmaI 12.3500 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.800 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.83 _reflns_shell.d_res_low 1.90 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.45600 _reflns_shell.pdbx_Rsym_value 0.45600 _reflns_shell.meanI_over_sigI_obs 12.350 _reflns_shell.pdbx_redundancy 2.60 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3GKK _refine.ls_number_reflns_obs 10795 _refine.ls_number_reflns_all 10795 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 1.83 _refine.ls_percent_reflns_obs 93.1 _refine.ls_R_factor_obs 0.179 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.179 _refine.ls_R_factor_R_free 0.228 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 564 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 17.09 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1180 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 1325 _refine_hist.d_res_high 1.83 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.004817 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.32829 ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? 1.296 1.500 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 1.987 2.000 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 2.017 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 2.862 2.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.83 _refine_ls_shell.d_res_low 1.90 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs 99.5 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file protein_rep.param _pdbx_xplor_file.topol_file protein_rep.top # _struct.entry_id 3GKK _struct.title ;Insights into the Alkyl Peroxide Reduction Activity of Xanthomonas campestris Bacterioferritin Comigratory Protein from the Trapped Intermediate/Ligand Complex Structures ; _struct.pdbx_descriptor 'Bacterioferritin comigratory protein (E.C.1.11.1.15)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GKK _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'Xanthomonas campestris, Bcp, Prx, Atypical 2-Cys, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 12 ? LEU A 18 ? PRO A 9 LEU A 15 5 ? 7 HELX_P HELX_P2 2 LEU A 30 ? ALA A 34 ? LEU A 27 ALA A 31 5 ? 5 HELX_P HELX_P3 3 SER A 47 ? ALA A 68 ? SER A 44 ALA A 65 1 ? 22 HELX_P HELX_P4 4 CYS A 87 ? GLY A 91 ? CYS A 84 GLY A 88 5 ? 5 HELX_P HELX_P5 5 GLU A 102 ? PHE A 108 ? GLU A 99 PHE A 105 1 ? 7 HELX_P HELX_P6 6 GLY A 148 ? ALA A 161 ? GLY A 145 ALA A 158 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 51 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 87 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 48 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 84 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.030 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 20 ? SER A 21 ? LEU A 17 SER A 18 A 2 GLN A 27 ? THR A 28 ? GLN A 24 THR A 25 B 1 LEU A 96 ? SER A 98 ? LEU A 93 SER A 95 B 2 ALA A 70 ? SER A 76 ? ALA A 67 SER A 73 B 3 TRP A 37 ? PHE A 42 ? TRP A 34 PHE A 39 B 4 SER A 127 ? LEU A 131 ? SER A 124 LEU A 128 B 5 VAL A 137 ? ARG A 142 ? VAL A 134 ARG A 139 C 1 ILE A 111 ? MET A 116 ? ILE A 108 MET A 113 C 2 LYS A 119 ? ILE A 124 ? LYS A 116 ILE A 121 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 20 ? N LEU A 17 O THR A 28 ? O THR A 25 B 1 2 O VAL A 97 ? O VAL A 94 N GLY A 74 ? N GLY A 71 B 2 3 O VAL A 75 ? O VAL A 72 N TYR A 41 ? N TYR A 38 B 3 4 N PHE A 42 ? N PHE A 39 O SER A 127 ? O SER A 124 B 4 5 N THR A 128 ? N THR A 125 O TRP A 141 ? O TRP A 138 C 1 2 N LYS A 114 ? N LYS A 111 O VAL A 121 ? O VAL A 118 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SO4 A 296' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SO4 A 297' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 PRO A 44 ? PRO A 41 . ? 1_555 ? 2 AC1 7 LYS A 45 ? LYS A 42 . ? 1_555 ? 3 AC1 7 ASP A 46 ? ASP A 43 . ? 1_555 ? 4 AC1 7 ARG A 77 ? ARG A 74 . ? 1_555 ? 5 AC1 7 GLY A 123 ? GLY A 120 . ? 1_555 ? 6 AC1 7 ILE A 124 ? ILE A 121 . ? 1_555 ? 7 AC1 7 HOH D . ? HOH A 287 . ? 1_555 ? 8 AC2 7 PRO A 12 ? PRO A 9 . ? 1_455 ? 9 AC2 7 ALA A 13 ? ALA A 10 . ? 1_455 ? 10 AC2 7 LYS A 145 ? LYS A 142 . ? 1_555 ? 11 AC2 7 VAL A 146 ? VAL A 143 . ? 1_555 ? 12 AC2 7 ALA A 147 ? ALA A 144 . ? 1_555 ? 13 AC2 7 HOH D . ? HOH A 205 . ? 1_455 ? 14 AC2 7 HOH D . ? HOH A 263 . ? 1_555 ? # _atom_sites.entry_id 3GKK _atom_sites.fract_transf_matrix[1][1] 0.028707 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.009455 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018300 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028731 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MET 4 1 1 MET MET A . n A 1 5 THR 5 2 2 THR THR A . n A 1 6 ASP 6 3 3 ASP ASP A . n A 1 7 ALA 7 4 4 ALA ALA A . n A 1 8 VAL 8 5 5 VAL VAL A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 GLU 10 7 7 GLU GLU A . n A 1 11 LEU 11 8 8 LEU LEU A . n A 1 12 PRO 12 9 9 PRO PRO A . n A 1 13 ALA 13 10 10 ALA ALA A . n A 1 14 ALA 14 11 11 ALA ALA A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 PHE 16 13 13 PHE PHE A . n A 1 17 ASP 17 14 14 ASP ASP A . n A 1 18 LEU 18 15 15 LEU LEU A . n A 1 19 PRO 19 16 16 PRO PRO A . n A 1 20 LEU 20 17 17 LEU LEU A . n A 1 21 SER 21 18 18 SER SER A . n A 1 22 LEU 22 19 19 LEU LEU A . n A 1 23 SER 23 20 20 SER SER A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 GLY 25 22 22 GLY GLY A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 GLN 27 24 24 GLN GLN A . n A 1 28 THR 28 25 25 THR THR A . n A 1 29 THR 29 26 26 THR THR A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ARG 31 28 28 ARG ARG A . n A 1 32 ALA 32 29 29 ALA ALA A . n A 1 33 HIS 33 30 30 HIS HIS A . n A 1 34 ALA 34 31 31 ALA ALA A . n A 1 35 GLY 35 32 32 GLY GLY A . n A 1 36 HIS 36 33 33 HIS HIS A . n A 1 37 TRP 37 34 34 TRP TRP A . n A 1 38 LEU 38 35 35 LEU LEU A . n A 1 39 VAL 39 36 36 VAL VAL A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 TYR 41 38 38 TYR TYR A . n A 1 42 PHE 42 39 39 PHE PHE A . n A 1 43 TYR 43 40 40 TYR TYR A . n A 1 44 PRO 44 41 41 PRO PRO A . n A 1 45 LYS 45 42 42 LYS LYS A . n A 1 46 ASP 46 43 43 ASP ASP A . n A 1 47 SER 47 44 44 SER SER A . n A 1 48 THR 48 45 45 THR THR A . n A 1 49 PRO 49 46 46 PRO PRO A . n A 1 50 GLY 50 47 47 GLY GLY A . n A 1 51 CYS 51 48 48 CYS CYS A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 THR 53 50 50 THR THR A . n A 1 54 GLU 54 51 51 GLU GLU A . n A 1 55 GLY 55 52 52 GLY GLY A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 ASP 57 54 54 ASP ASP A . n A 1 58 PHE 58 55 55 PHE PHE A . n A 1 59 ASN 59 56 56 ASN ASN A . n A 1 60 ALA 60 57 57 ALA ALA A . n A 1 61 LEU 61 58 58 LEU LEU A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 PRO 63 60 60 PRO PRO A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 PHE 65 62 62 PHE PHE A . n A 1 66 ASP 66 63 63 ASP ASP A . n A 1 67 LYS 67 64 64 LYS LYS A . n A 1 68 ALA 68 65 65 ALA ALA A . n A 1 69 GLY 69 66 66 GLY GLY A . n A 1 70 ALA 70 67 67 ALA ALA A . n A 1 71 LYS 71 68 68 LYS LYS A . n A 1 72 ILE 72 69 69 ILE ILE A . n A 1 73 LEU 73 70 70 LEU LEU A . n A 1 74 GLY 74 71 71 GLY GLY A . n A 1 75 VAL 75 72 72 VAL VAL A . n A 1 76 SER 76 73 73 SER SER A . n A 1 77 ARG 77 74 74 ARG ARG A . n A 1 78 ASP 78 75 75 ASP ASP A . n A 1 79 SER 79 76 76 SER SER A . n A 1 80 VAL 80 77 77 VAL VAL A . n A 1 81 LYS 81 78 78 LYS LYS A . n A 1 82 SER 82 79 ? ? ? A . n A 1 83 HIS 83 80 ? ? ? A . n A 1 84 ASP 84 81 ? ? ? A . n A 1 85 ASN 85 82 82 ASN ASN A . n A 1 86 PHE 86 83 83 PHE PHE A . n A 1 87 CYS 87 84 84 CYS CYS A . n A 1 88 ALA 88 85 85 ALA ALA A . n A 1 89 LYS 89 86 86 LYS LYS A . n A 1 90 GLN 90 87 87 GLN GLN A . n A 1 91 GLY 91 88 88 GLY GLY A . n A 1 92 PHE 92 89 89 PHE PHE A . n A 1 93 ALA 93 90 90 ALA ALA A . n A 1 94 PHE 94 91 91 PHE PHE A . n A 1 95 PRO 95 92 92 PRO PRO A . n A 1 96 LEU 96 93 93 LEU LEU A . n A 1 97 VAL 97 94 94 VAL VAL A . n A 1 98 SER 98 95 95 SER SER A . n A 1 99 ASP 99 96 96 ASP ASP A . n A 1 100 GLY 100 97 97 GLY GLY A . n A 1 101 ASP 101 98 98 ASP ASP A . n A 1 102 GLU 102 99 99 GLU GLU A . n A 1 103 ALA 103 100 100 ALA ALA A . n A 1 104 LEU 104 101 101 LEU LEU A . n A 1 105 CYS 105 102 102 CYS CYS A . n A 1 106 ARG 106 103 103 ARG ARG A . n A 1 107 ALA 107 104 104 ALA ALA A . n A 1 108 PHE 108 105 105 PHE PHE A . n A 1 109 ASP 109 106 106 ASP ASP A . n A 1 110 VAL 110 107 107 VAL VAL A . n A 1 111 ILE 111 108 108 ILE ILE A . n A 1 112 LYS 112 109 109 LYS LYS A . n A 1 113 GLU 113 110 110 GLU GLU A . n A 1 114 LYS 114 111 111 LYS LYS A . n A 1 115 ASN 115 112 112 ASN ASN A . n A 1 116 MET 116 113 113 MET MET A . n A 1 117 TYR 117 114 114 TYR TYR A . n A 1 118 GLY 118 115 115 GLY GLY A . n A 1 119 LYS 119 116 116 LYS LYS A . n A 1 120 GLN 120 117 117 GLN GLN A . n A 1 121 VAL 121 118 118 VAL VAL A . n A 1 122 LEU 122 119 119 LEU LEU A . n A 1 123 GLY 123 120 120 GLY GLY A . n A 1 124 ILE 124 121 121 ILE ILE A . n A 1 125 GLU 125 122 122 GLU GLU A . n A 1 126 ARG 126 123 123 ARG ARG A . n A 1 127 SER 127 124 124 SER SER A . n A 1 128 THR 128 125 125 THR THR A . n A 1 129 PHE 129 126 126 PHE PHE A . n A 1 130 LEU 130 127 127 LEU LEU A . n A 1 131 LEU 131 128 128 LEU LEU A . n A 1 132 SER 132 129 129 SER SER A . n A 1 133 PRO 133 130 130 PRO PRO A . n A 1 134 GLU 134 131 131 GLU GLU A . n A 1 135 GLY 135 132 132 GLY GLY A . n A 1 136 GLN 136 133 133 GLN GLN A . n A 1 137 VAL 137 134 134 VAL VAL A . n A 1 138 VAL 138 135 135 VAL VAL A . n A 1 139 GLN 139 136 136 GLN GLN A . n A 1 140 ALA 140 137 137 ALA ALA A . n A 1 141 TRP 141 138 138 TRP TRP A . n A 1 142 ARG 142 139 139 ARG ARG A . n A 1 143 LYS 143 140 140 LYS LYS A . n A 1 144 VAL 144 141 141 VAL VAL A . n A 1 145 LYS 145 142 142 LYS LYS A . n A 1 146 VAL 146 143 143 VAL VAL A . n A 1 147 ALA 147 144 144 ALA ALA A . n A 1 148 GLY 148 145 145 GLY GLY A . n A 1 149 HIS 149 146 146 HIS HIS A . n A 1 150 ALA 150 147 147 ALA ALA A . n A 1 151 ASP 151 148 148 ASP ASP A . n A 1 152 ALA 152 149 149 ALA ALA A . n A 1 153 VAL 153 150 150 VAL VAL A . n A 1 154 LEU 154 151 151 LEU LEU A . n A 1 155 ALA 155 152 152 ALA ALA A . n A 1 156 ALA 156 153 153 ALA ALA A . n A 1 157 LEU 157 154 154 LEU LEU A . n A 1 158 LYS 158 155 155 LYS LYS A . n A 1 159 ALA 159 156 156 ALA ALA A . n A 1 160 HIS 160 157 157 HIS HIS A . n A 1 161 ALA 161 158 158 ALA ALA A . n A 1 162 LYS 162 159 ? ? ? A . n A 1 163 GLN 163 160 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 296 296 SO4 SO4 A . C 2 SO4 1 297 297 SO4 SO4 A . D 3 HOH 1 161 161 HOH HOH A . D 3 HOH 2 162 162 HOH HOH A . D 3 HOH 3 163 163 HOH HOH A . D 3 HOH 4 164 164 HOH HOH A . D 3 HOH 5 165 165 HOH HOH A . D 3 HOH 6 166 166 HOH HOH A . D 3 HOH 7 167 167 HOH HOH A . D 3 HOH 8 168 168 HOH HOH A . D 3 HOH 9 169 169 HOH HOH A . D 3 HOH 10 170 170 HOH HOH A . D 3 HOH 11 171 171 HOH HOH A . D 3 HOH 12 172 172 HOH HOH A . D 3 HOH 13 173 173 HOH HOH A . D 3 HOH 14 174 174 HOH HOH A . D 3 HOH 15 175 175 HOH HOH A . D 3 HOH 16 176 176 HOH HOH A . D 3 HOH 17 177 177 HOH HOH A . D 3 HOH 18 178 178 HOH HOH A . D 3 HOH 19 179 179 HOH HOH A . D 3 HOH 20 180 180 HOH HOH A . D 3 HOH 21 181 181 HOH HOH A . D 3 HOH 22 182 182 HOH HOH A . D 3 HOH 23 183 183 HOH HOH A . D 3 HOH 24 184 184 HOH HOH A . D 3 HOH 25 185 185 HOH HOH A . D 3 HOH 26 186 186 HOH HOH A . D 3 HOH 27 187 187 HOH HOH A . D 3 HOH 28 188 188 HOH HOH A . D 3 HOH 29 189 189 HOH HOH A . D 3 HOH 30 190 190 HOH HOH A . D 3 HOH 31 191 191 HOH HOH A . D 3 HOH 32 192 192 HOH HOH A . D 3 HOH 33 193 193 HOH HOH A . D 3 HOH 34 194 194 HOH HOH A . D 3 HOH 35 195 195 HOH HOH A . D 3 HOH 36 196 196 HOH HOH A . D 3 HOH 37 197 197 HOH HOH A . D 3 HOH 38 198 198 HOH HOH A . D 3 HOH 39 199 199 HOH HOH A . D 3 HOH 40 200 200 HOH HOH A . D 3 HOH 41 201 201 HOH HOH A . D 3 HOH 42 202 202 HOH HOH A . D 3 HOH 43 203 203 HOH HOH A . D 3 HOH 44 204 204 HOH HOH A . D 3 HOH 45 205 205 HOH HOH A . D 3 HOH 46 206 206 HOH HOH A . D 3 HOH 47 207 207 HOH HOH A . D 3 HOH 48 208 208 HOH HOH A . D 3 HOH 49 209 209 HOH HOH A . D 3 HOH 50 210 210 HOH HOH A . D 3 HOH 51 211 211 HOH HOH A . D 3 HOH 52 212 212 HOH HOH A . D 3 HOH 53 213 213 HOH HOH A . D 3 HOH 54 214 214 HOH HOH A . D 3 HOH 55 215 215 HOH HOH A . D 3 HOH 56 216 216 HOH HOH A . D 3 HOH 57 217 217 HOH HOH A . D 3 HOH 58 218 218 HOH HOH A . D 3 HOH 59 219 219 HOH HOH A . D 3 HOH 60 220 220 HOH HOH A . D 3 HOH 61 221 221 HOH HOH A . D 3 HOH 62 222 222 HOH HOH A . D 3 HOH 63 223 223 HOH HOH A . D 3 HOH 64 224 224 HOH HOH A . D 3 HOH 65 225 225 HOH HOH A . D 3 HOH 66 226 226 HOH HOH A . D 3 HOH 67 227 227 HOH HOH A . D 3 HOH 68 228 228 HOH HOH A . D 3 HOH 69 229 229 HOH HOH A . D 3 HOH 70 230 230 HOH HOH A . D 3 HOH 71 231 231 HOH HOH A . D 3 HOH 72 232 232 HOH HOH A . D 3 HOH 73 233 233 HOH HOH A . D 3 HOH 74 234 234 HOH HOH A . D 3 HOH 75 235 235 HOH HOH A . D 3 HOH 76 236 236 HOH HOH A . D 3 HOH 77 237 237 HOH HOH A . D 3 HOH 78 238 238 HOH HOH A . D 3 HOH 79 239 239 HOH HOH A . D 3 HOH 80 240 240 HOH HOH A . D 3 HOH 81 241 241 HOH HOH A . D 3 HOH 82 242 242 HOH HOH A . D 3 HOH 83 243 243 HOH HOH A . D 3 HOH 84 244 244 HOH HOH A . D 3 HOH 85 245 245 HOH HOH A . D 3 HOH 86 246 246 HOH HOH A . D 3 HOH 87 247 247 HOH HOH A . D 3 HOH 88 248 248 HOH HOH A . D 3 HOH 89 249 249 HOH HOH A . D 3 HOH 90 250 250 HOH HOH A . D 3 HOH 91 251 251 HOH HOH A . D 3 HOH 92 252 252 HOH HOH A . D 3 HOH 93 253 253 HOH HOH A . D 3 HOH 94 254 254 HOH HOH A . D 3 HOH 95 255 255 HOH HOH A . D 3 HOH 96 256 256 HOH HOH A . D 3 HOH 97 257 257 HOH HOH A . D 3 HOH 98 258 258 HOH HOH A . D 3 HOH 99 259 259 HOH HOH A . D 3 HOH 100 260 260 HOH HOH A . D 3 HOH 101 261 261 HOH HOH A . D 3 HOH 102 262 262 HOH HOH A . D 3 HOH 103 263 263 HOH HOH A . D 3 HOH 104 264 264 HOH HOH A . D 3 HOH 105 265 265 HOH HOH A . D 3 HOH 106 266 266 HOH HOH A . D 3 HOH 107 267 267 HOH HOH A . D 3 HOH 108 268 268 HOH HOH A . D 3 HOH 109 269 269 HOH HOH A . D 3 HOH 110 270 270 HOH HOH A . D 3 HOH 111 271 271 HOH HOH A . D 3 HOH 112 272 272 HOH HOH A . D 3 HOH 113 273 273 HOH HOH A . D 3 HOH 114 274 274 HOH HOH A . D 3 HOH 115 275 275 HOH HOH A . D 3 HOH 116 276 276 HOH HOH A . D 3 HOH 117 277 277 HOH HOH A . D 3 HOH 118 278 278 HOH HOH A . D 3 HOH 119 279 279 HOH HOH A . D 3 HOH 120 280 280 HOH HOH A . D 3 HOH 121 281 281 HOH HOH A . D 3 HOH 122 282 282 HOH HOH A . D 3 HOH 123 283 283 HOH HOH A . D 3 HOH 124 284 284 HOH HOH A . D 3 HOH 125 285 285 HOH HOH A . D 3 HOH 126 286 286 HOH HOH A . D 3 HOH 127 287 287 HOH HOH A . D 3 HOH 128 288 288 HOH HOH A . D 3 HOH 129 289 289 HOH HOH A . D 3 HOH 130 290 290 HOH HOH A . D 3 HOH 131 291 291 HOH HOH A . D 3 HOH 132 292 292 HOH HOH A . D 3 HOH 133 293 293 HOH HOH A . D 3 HOH 134 294 294 HOH HOH A . D 3 HOH 135 295 295 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 7 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A SER 79 ? A SER 82 4 1 Y 1 A HIS 80 ? A HIS 83 5 1 Y 1 A ASP 81 ? A ASP 84 6 1 Y 1 A LYS 159 ? A LYS 162 7 1 Y 1 A GLN 160 ? A GLN 163 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #