HEADER HORMONE ACTIVATOR 01-APR-09 3GWS TITLE CRYSTAL STRUCTURE OF T3-BOUND THYROID HORMONE RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: THYROID HORMONE RECEPTOR BETA; COMPND 3 CHAIN: X; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN (UNP RESIDUES 202 TO 460); COMPND 5 SYNONYM: NUCLEAR RECEPTOR SUBFAMILY 1 GROUP A MEMBER 2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: THRB, ERBA2, NR1A2, THR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS THYROID HORMONE RECEPTOR, T3, HINGE, ALTERNATIVE SPLICING, DEAFNESS, KEYWDS 2 DISEASE MUTATION, DNA-BINDING, METAL-BINDING, NUCLEUS, POLYMORPHISM, KEYWDS 3 RECEPTOR, TRANSCRIPTION, TRANSCRIPTION REGULATION, ZINC, ZINC- KEYWDS 4 FINGER, HORMONE ACTIVATOR EXPDTA X-RAY DIFFRACTION AUTHOR A.S.NASCIMENTO,S.M.G.DIAS,F.M.NUNES,R.APARICIO,I.POLIKARPOV, AUTHOR 2 J.D.BAXTER,P.WEBB REVDAT 3 15-NOV-23 3GWS 1 ATOM REVDAT 2 06-SEP-23 3GWS 1 REMARK LINK REVDAT 1 28-APR-09 3GWS 0 SPRSDE 28-APR-09 3GWS 2H6W JRNL AUTH A.S.NASCIMENTO,S.M.G.DIAS,F.M.NUNES,R.APARICIO, JRNL AUTH 2 A.L.B.AMBROSIO,L.BLEICHER,A.C.M.FIGUEIRA,M.A.M.SANTOS, JRNL AUTH 3 M.DE OLIVEIRA NETO,H.FISCHER,M.TOGASHI,A.F.CRAIEVICH, JRNL AUTH 4 R.C.GARRATT,J.D.BAXTER,P.WEBB,I.POLIKARPOV JRNL TITL STRUCTURAL REARRANGEMENTS IN THE THYROID HORMONE RECEPTOR JRNL TITL 2 HINGE DOMAIN AND THEIR PUTATIVE ROLE IN THE RECEPTOR JRNL TITL 3 FUNCTION JRNL REF J.MOL.BIOL. V. 360 586 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16781732 JRNL DOI 10.1016/J.JMB.2006.05.008 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 81.8 REMARK 3 NUMBER OF REFLECTIONS : 29016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.6681 - 4.8814 0.88 2689 143 0.1753 0.2163 REMARK 3 2 4.8814 - 3.8794 0.88 2712 123 0.1503 0.1863 REMARK 3 3 3.8794 - 3.3904 0.88 2718 116 0.1673 0.1821 REMARK 3 4 3.3904 - 3.0811 0.88 2687 155 0.1875 0.2564 REMARK 3 5 3.0811 - 2.8606 0.85 2583 139 0.2040 0.2325 REMARK 3 6 2.8606 - 2.6921 0.81 2511 124 0.1975 0.2246 REMARK 3 7 2.6921 - 2.5575 0.80 2400 146 0.1983 0.2134 REMARK 3 8 2.5575 - 2.4462 0.78 2426 126 0.2114 0.2531 REMARK 3 9 2.4462 - 2.3521 0.76 2354 120 0.2272 0.2763 REMARK 3 10 2.3521 - 2.2710 0.74 2197 151 0.2695 0.3204 REMARK 3 11 2.2710 - 2.2001 0.74 2268 128 0.2912 0.3329 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 55.97 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : 16.030 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN X AND RESID 202:211 REMARK 3 ORIGIN FOR THE GROUP (A): -2.3398 36.3251 -7.1945 REMARK 3 T TENSOR REMARK 3 T11: 0.7972 T22: 0.4431 REMARK 3 T33: 0.3178 T12: 0.0206 REMARK 3 T13: -0.2233 T23: 0.1207 REMARK 3 L TENSOR REMARK 3 L11: -0.0102 L22: 0.0124 REMARK 3 L33: -0.0621 L12: -0.1625 REMARK 3 L13: 0.0018 L23: -0.1458 REMARK 3 S TENSOR REMARK 3 S11: -0.7268 S12: -0.2618 S13: 0.9284 REMARK 3 S21: -0.8868 S22: 0.3768 S23: 0.1794 REMARK 3 S31: 0.6512 S32: 0.2836 S33: 0.0005 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN X AND RESID 212:232 REMARK 3 ORIGIN FOR THE GROUP (A): 10.4586 37.4732 10.2116 REMARK 3 T TENSOR REMARK 3 T11: 0.3093 T22: 0.2342 REMARK 3 T33: 0.2518 T12: -0.1441 REMARK 3 T13: 0.0350 T23: 0.0773 REMARK 3 L TENSOR REMARK 3 L11: 0.6319 L22: 1.0230 REMARK 3 L33: 1.2038 L12: -0.3634 REMARK 3 L13: -0.3403 L23: 0.7267 REMARK 3 S TENSOR REMARK 3 S11: 0.0810 S12: -0.0020 S13: 0.4712 REMARK 3 S21: -0.6155 S22: -0.1939 S23: -0.5990 REMARK 3 S31: -1.0919 S32: 0.5075 S33: 0.0110 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN X AND RESID 233:249 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8842 14.6807 24.6345 REMARK 3 T TENSOR REMARK 3 T11: 0.3691 T22: 0.8600 REMARK 3 T33: 0.7730 T12: 0.1259 REMARK 3 T13: -0.0261 T23: 0.3707 REMARK 3 L TENSOR REMARK 3 L11: 0.2118 L22: 0.3528 REMARK 3 L33: 0.3870 L12: -0.4248 REMARK 3 L13: 0.4810 L23: 0.4026 REMARK 3 S TENSOR REMARK 3 S11: 0.3878 S12: 0.1310 S13: -0.3112 REMARK 3 S21: -0.1225 S22: -0.6732 S23: -1.1059 REMARK 3 S31: 0.3772 S32: 1.4728 S33: -0.0005 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN X AND RESID 250:294 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8036 25.7515 30.6351 REMARK 3 T TENSOR REMARK 3 T11: 0.1524 T22: 0.3306 REMARK 3 T33: 0.1245 T12: -0.0669 REMARK 3 T13: -0.0937 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 2.9972 L22: 0.5300 REMARK 3 L33: 1.9652 L12: 0.1692 REMARK 3 L13: -0.2429 L23: 1.2726 REMARK 3 S TENSOR REMARK 3 S11: 0.1551 S12: -0.6442 S13: -0.0873 REMARK 3 S21: 0.2634 S22: -0.2545 S23: -0.5362 REMARK 3 S31: -0.0350 S32: 0.4095 S33: -0.0011 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN X AND RESID 295:333 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2694 25.1983 24.0369 REMARK 3 T TENSOR REMARK 3 T11: 0.0759 T22: 0.1922 REMARK 3 T33: 0.1684 T12: -0.0291 REMARK 3 T13: -0.0192 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 1.8249 L22: 0.6167 REMARK 3 L33: 2.6155 L12: -0.3312 REMARK 3 L13: 0.1596 L23: 0.2057 REMARK 3 S TENSOR REMARK 3 S11: 0.0100 S12: -0.3025 S13: 0.0445 REMARK 3 S21: 0.1351 S22: -0.0474 S23: -0.3344 REMARK 3 S31: -0.1793 S32: 0.2998 S33: 0.0004 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN X AND RESID 334:379 REMARK 3 ORIGIN FOR THE GROUP (A): 3.6860 18.1730 19.0896 REMARK 3 T TENSOR REMARK 3 T11: 0.0939 T22: 0.1631 REMARK 3 T33: 0.1756 T12: 0.0209 REMARK 3 T13: -0.0144 T23: 0.0578 REMARK 3 L TENSOR REMARK 3 L11: 1.5496 L22: 1.2811 REMARK 3 L33: 1.1525 L12: 0.9566 REMARK 3 L13: -0.5753 L23: 0.5316 REMARK 3 S TENSOR REMARK 3 S11: -0.0230 S12: -0.1975 S13: -0.2956 REMARK 3 S21: -0.0729 S22: -0.2336 S23: -0.2274 REMARK 3 S31: 0.1359 S32: 0.3676 S33: -0.0005 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN X AND RESID 380:393 REMARK 3 ORIGIN FOR THE GROUP (A): -8.7525 39.8323 21.0236 REMARK 3 T TENSOR REMARK 3 T11: 0.4143 T22: 0.2571 REMARK 3 T33: 0.4047 T12: 0.0545 REMARK 3 T13: -0.0590 T23: -0.1085 REMARK 3 L TENSOR REMARK 3 L11: 0.6547 L22: 0.0227 REMARK 3 L33: 1.0285 L12: -0.1047 REMARK 3 L13: -0.1786 L23: -0.0835 REMARK 3 S TENSOR REMARK 3 S11: -0.2300 S12: -0.0406 S13: 0.5775 REMARK 3 S21: -0.0350 S22: -0.1786 S23: 0.6169 REMARK 3 S31: -1.0233 S32: -0.8743 S33: -0.0072 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN X AND RESID 394:420 REMARK 3 ORIGIN FOR THE GROUP (A): 2.2123 30.6386 5.1446 REMARK 3 T TENSOR REMARK 3 T11: 0.2288 T22: 0.1745 REMARK 3 T33: 0.1666 T12: 0.0130 REMARK 3 T13: -0.0325 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 2.7088 L22: 0.9001 REMARK 3 L33: 1.5188 L12: 0.1231 REMARK 3 L13: -0.8843 L23: -1.3834 REMARK 3 S TENSOR REMARK 3 S11: 0.0657 S12: 0.3267 S13: -0.1854 REMARK 3 S21: -0.7133 S22: -0.1739 S23: -0.0379 REMARK 3 S31: -0.4150 S32: -0.0599 S33: 0.0004 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN X AND RESID 421:450 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5374 19.3513 27.8705 REMARK 3 T TENSOR REMARK 3 T11: 0.1639 T22: 0.2063 REMARK 3 T33: 0.3023 T12: -0.0345 REMARK 3 T13: -0.0091 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 2.3739 L22: 2.6731 REMARK 3 L33: 0.6247 L12: 0.5919 REMARK 3 L13: -0.7329 L23: 0.4560 REMARK 3 S TENSOR REMARK 3 S11: 0.1691 S12: -0.4029 S13: -0.2012 REMARK 3 S21: 0.4999 S22: -0.0050 S23: 0.1588 REMARK 3 S31: 0.3224 S32: -0.0969 S33: -0.0003 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN X AND RESID 451:460 REMARK 3 ORIGIN FOR THE GROUP (A): -0.6601 26.2585 37.7458 REMARK 3 T TENSOR REMARK 3 T11: 0.4021 T22: 0.4877 REMARK 3 T33: 0.1561 T12: -0.1641 REMARK 3 T13: -0.0390 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.0432 L22: 0.3070 REMARK 3 L33: 0.1547 L12: 0.0415 REMARK 3 L13: 0.0502 L23: -0.0225 REMARK 3 S TENSOR REMARK 3 S11: 0.5059 S12: -1.0488 S13: 0.0910 REMARK 3 S21: 0.4776 S22: -0.3178 S23: 0.7307 REMARK 3 S31: 0.1713 S32: -0.3119 S33: 0.0004 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GWS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000052404. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU ULTRAX 18 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5478 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18232 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 24.667 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.61800 REMARK 200 R SYM FOR SHELL (I) : 0.61800 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2H6W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM CACODYLATE, 1.4M SODIUM REMARK 280 ACETATE, PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.74900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.49800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 87.49800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.74900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN X 252 REMARK 465 ALA X 253 REMARK 465 PRO X 254 REMARK 465 ILE X 255 REMARK 465 VAL X 256 REMARK 465 ASN X 257 REMARK 465 ALA X 258 REMARK 465 PRO X 259 REMARK 465 GLU X 260 REMARK 465 GLY X 261 REMARK 465 GLY X 262 REMARK 465 LYS X 263 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS X 206 CG CD CE NZ REMARK 470 HIS X 238 CG ND1 CD2 CE1 NE2 REMARK 470 LYS X 242 CG CD CE NZ REMARK 470 LYS X 244 CG CD CE NZ REMARK 470 GLU X 248 CG CD OE1 OE2 REMARK 470 LEU X 266 CG CD1 CD2 REMARK 470 LYS X 274 CG CD CE NZ REMARK 470 GLU X 324 CG CD OE1 OE2 REMARK 470 HIS X 413 CA CB CG ND1 CD2 CE1 NE2 REMARK 470 GLU X 449 CG CD OE1 OE2 REMARK 470 LEU X 450 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CAS X 388 45.07 -89.48 REMARK 500 GLU X 445 -84.35 -97.71 REMARK 500 CYS X 446 155.35 -47.60 REMARK 500 PRO X 447 -168.92 -70.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE T3 X 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2H77 RELATED DB: PDB REMARK 900 RELATED ID: 2H79 RELATED DB: PDB DBREF 3GWS X 202 460 UNP P10828 THB_HUMAN 202 460 SEQRES 1 X 259 GLU GLU LEU GLN LYS SER ILE GLY HIS LYS PRO GLU PRO SEQRES 2 X 259 THR ASP GLU GLU TRP GLU LEU ILE LYS THR VAL THR GLU SEQRES 3 X 259 ALA HIS VAL ALA THR ASN ALA GLN GLY SER HIS TRP LYS SEQRES 4 X 259 GLN LYS ARG LYS PHE LEU PRO GLU ASP ILE GLY GLN ALA SEQRES 5 X 259 PRO ILE VAL ASN ALA PRO GLU GLY GLY LYS VAL ASP LEU SEQRES 6 X 259 GLU ALA PHE SER HIS PHE THR LYS ILE ILE THR PRO ALA SEQRES 7 X 259 ILE THR ARG VAL VAL ASP PHE ALA LYS LYS LEU PRO MET SEQRES 8 X 259 PHE CAS GLU LEU PRO CYS GLU ASP GLN ILE ILE LEU LEU SEQRES 9 X 259 LYS GLY CYS CYS MET GLU ILE MET SER LEU ARG ALA ALA SEQRES 10 X 259 VAL ARG TYR ASP PRO GLU SER GLU THR LEU THR LEU ASN SEQRES 11 X 259 GLY GLU MET ALA VAL THR ARG GLY GLN LEU LYS ASN GLY SEQRES 12 X 259 GLY LEU GLY VAL VAL SER ASP ALA ILE PHE ASP LEU GLY SEQRES 13 X 259 MET SER LEU SER SER PHE ASN LEU ASP ASP THR GLU VAL SEQRES 14 X 259 ALA LEU LEU GLN ALA VAL LEU LEU MET SER SER ASP ARG SEQRES 15 X 259 PRO GLY LEU ALA CAS VAL GLU ARG ILE GLU LYS TYR GLN SEQRES 16 X 259 ASP SER PHE LEU LEU ALA PHE GLU HIS TYR ILE ASN TYR SEQRES 17 X 259 ARG LYS HIS HIS VAL THR HIS PHE TRP PRO LYS LEU LEU SEQRES 18 X 259 MET LYS VAL THR ASP LEU ARG MET ILE GLY ALA CAS HIS SEQRES 19 X 259 ALA SER ARG PHE LEU HIS MET LYS VAL GLU CYS PRO THR SEQRES 20 X 259 GLU LEU PHE PRO PRO LEU PHE LEU GLU VAL PHE GLU MODRES 3GWS CAS X 294 CYS S-(DIMETHYLARSENIC)CYSTEINE MODRES 3GWS CAS X 388 CYS S-(DIMETHYLARSENIC)CYSTEINE MODRES 3GWS CAS X 434 CYS S-(DIMETHYLARSENIC)CYSTEINE HET CAS X 294 9 HET CAS X 388 9 HET CAS X 434 9 HET T3 X 500 23 HETNAM CAS S-(DIMETHYLARSENIC)CYSTEINE HETNAM T3 3,5,3'TRIIODOTHYRONINE HETSYN T3 T3; THYROID HORMONE; LIOTHYRONINE FORMUL 1 CAS 3(C5 H12 AS N O2 S) FORMUL 2 T3 C15 H12 I3 N O4 FORMUL 3 HOH *175(H2 O) HELIX 1 1 GLU X 202 GLY X 209 1 8 HELIX 2 2 THR X 215 THR X 232 1 18 HELIX 3 3 HIS X 238 ARG X 243 1 6 HELIX 4 4 ASP X 265 ILE X 275 1 11 HELIX 5 5 ILE X 275 LYS X 289 1 15 HELIX 6 6 LEU X 290 GLU X 295 1 6 HELIX 7 7 PRO X 297 VAL X 319 1 23 HELIX 8 8 THR X 337 GLY X 344 1 8 HELIX 9 9 GLY X 347 SER X 361 1 15 HELIX 10 10 SER X 362 ASN X 364 5 3 HELIX 11 11 ASP X 366 MET X 379 1 14 HELIX 12 12 CAS X 388 LYS X 411 1 24 HELIX 13 13 HIS X 416 CYS X 446 1 31 HELIX 14 14 PRO X 452 GLU X 460 1 9 SHEET 1 A 3 LYS X 244 PHE X 245 0 SHEET 2 A 3 MET X 334 VAL X 336 1 O ALA X 335 N LYS X 244 SHEET 3 A 3 LEU X 328 LEU X 330 -1 N LEU X 330 O MET X 334 LINK C PHE X 293 N CAS X 294 1555 1555 1.33 LINK C CAS X 294 N GLU X 295 1555 1555 1.33 LINK C ALA X 387 N CAS X 388 1555 1555 1.33 LINK C CAS X 388 N VAL X 389 1555 1555 1.33 LINK C ALA X 433 N CAS X 434 1555 1555 1.33 LINK C CAS X 434 N HIS X 435 1555 1555 1.33 SITE 1 AC1 17 HOH X 9 HOH X 121 HOH X 124 PHE X 272 SITE 2 AC1 17 ILE X 276 ALA X 279 ARG X 282 MET X 313 SITE 3 AC1 17 ARG X 316 THR X 329 LEU X 330 ASN X 331 SITE 4 AC1 17 GLY X 344 LEU X 346 ILE X 353 HIS X 435 SITE 5 AC1 17 PHE X 455 CRYST1 68.974 68.974 131.247 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014498 0.008371 0.000000 0.00000 SCALE2 0.000000 0.016741 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007619 0.00000