data_3JXB # _entry.id 3JXB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3JXB pdb_00003jxb 10.2210/pdb3jxb/pdb NDB NA0181 ? ? RCSB RCSB055276 ? ? WWPDB D_1000055276 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3JXC 'Crystal structure of P22 c2 repressor protein in complex with synthetic operator 9T in the presence of Tl+' unspecified PDB 3JXD 'Crystal structure of P22 c2 repressor protein in complex with synthetic operator 9C in presence of Rb+' unspecified # _pdbx_database_status.entry_id 3JXB _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-09-18 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Watkins, D.' 1 'Koudelka, G.B.' 2 'Williams, L.D.' 3 # _citation.id primary _citation.title 'Sequence Recognition of DNA by Protein-Induced Conformational Transitions' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 396 _citation.page_first 1145 _citation.page_last 1164 _citation.year 2010 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20053356 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.12.050 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Watkins, D.' 1 ? primary 'Mohan, S.' 2 ? primary 'Koudelka, G.B.' 3 ? primary 'Williams, L.D.' 4 ? # _cell.length_a 40.602 _cell.length_b 54.319 _cell.length_c 114.112 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3JXB _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3JXB _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*A)-3'" 6116.004 1 ? ? ? 'Synthetic DNA Operator 9C' 2 polymer syn "5'-D(*TP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3'" 6147.014 1 ? ? ? 'Synthetic DNA Operator 9C' 3 polymer man 'Repressor protein C2' 7494.681 2 ? ? 'N-terminal domain: UNP residues 2-68' ? 4 water nat water 18.015 300 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DA)(DT)(DT)(DT)(DA)(DA)(DG)(DA)(DC)(DG)(DT)(DC)(DT)(DT)(DA)(DA)(DA)(DT)(DA)' CATTTAAGACGTCTTAAATA A ? 2 polydeoxyribonucleotide no no '(DT)(DA)(DT)(DT)(DT)(DA)(DA)(DG)(DA)(DC)(DG)(DT)(DC)(DT)(DT)(DA)(DA)(DA)(DT)(DG)' TATTTAAGACGTCTTAAATG B ? 3 'polypeptide(L)' no no NTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGD NTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGD C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DT n 1 4 DT n 1 5 DT n 1 6 DA n 1 7 DA n 1 8 DG n 1 9 DA n 1 10 DC n 1 11 DG n 1 12 DT n 1 13 DC n 1 14 DT n 1 15 DT n 1 16 DA n 1 17 DA n 1 18 DA n 1 19 DT n 1 20 DA n 2 1 DT n 2 2 DA n 2 3 DT n 2 4 DT n 2 5 DT n 2 6 DA n 2 7 DA n 2 8 DG n 2 9 DA n 2 10 DC n 2 11 DG n 2 12 DT n 2 13 DC n 2 14 DT n 2 15 DT n 2 16 DA n 2 17 DA n 2 18 DA n 2 19 DT n 2 20 DG n 3 1 ASN n 3 2 THR n 3 3 GLN n 3 4 LEU n 3 5 MET n 3 6 GLY n 3 7 GLU n 3 8 ARG n 3 9 ILE n 3 10 ARG n 3 11 ALA n 3 12 ARG n 3 13 ARG n 3 14 LYS n 3 15 LYS n 3 16 LEU n 3 17 LYS n 3 18 ILE n 3 19 ARG n 3 20 GLN n 3 21 ALA n 3 22 ALA n 3 23 LEU n 3 24 GLY n 3 25 LYS n 3 26 MET n 3 27 VAL n 3 28 GLY n 3 29 VAL n 3 30 SER n 3 31 ASN n 3 32 VAL n 3 33 ALA n 3 34 ILE n 3 35 SER n 3 36 GLN n 3 37 TRP n 3 38 GLU n 3 39 ARG n 3 40 SER n 3 41 GLU n 3 42 THR n 3 43 GLU n 3 44 PRO n 3 45 ASN n 3 46 GLY n 3 47 GLU n 3 48 ASN n 3 49 LEU n 3 50 LEU n 3 51 ALA n 3 52 LEU n 3 53 SER n 3 54 LYS n 3 55 ALA n 3 56 LEU n 3 57 GLN n 3 58 CYS n 3 59 SER n 3 60 PRO n 3 61 ASP n 3 62 TYR n 3 63 LEU n 3 64 LEU n 3 65 LYS n 3 66 GLY n 3 67 ASP n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Bacteriophage P22' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene C2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage P22' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10754 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain XA90 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pUC18 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'Synthetic DNA Operator 9C' 2 1 sample ? ? ? ? ? 'Synthetic DNA Operator 9C' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 PDB 3JXB 3JXB 1 CATTTAAGACGTCTTAAATA 1 ? 2 PDB 3JXB 3JXB 2 TATTTAAGACGTCTTAAATG 1 ? 3 UNP RPC2_BPP22 P69202 3 NTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGD 2 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3JXB A 1 ? 20 ? 3JXB 1 ? 20 ? 1 20 2 2 3JXB B 1 ? 20 ? 3JXB 21 ? 40 ? 21 40 3 3 3JXB C 1 ? 67 ? P69202 2 ? 68 ? 2 68 4 3 3JXB D 1 ? 67 ? P69202 2 ? 68 ? 2 68 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3JXB _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'PEG 400, NaCl, Tris-HCl, MgCl2, LiCl, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 400' ? ? ? 1 2 1 NaCl ? ? ? 1 3 1 Tris-HCl ? ? ? 1 4 1 MgCl2 ? ? ? 1 5 1 LiCl ? ? ? 1 6 2 'PEG 400' ? ? ? 1 7 2 NaCl ? ? ? 1 8 2 Tris-HCl ? ? ? 1 9 2 MgCl2 ? ? ? 1 10 2 LiCl ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2007-08-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X26C' _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X26C # _reflns.entry_id 3JXB _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.67 _reflns.d_resolution_low 19.90 _reflns.number_all 29254 _reflns.number_obs 29254 _reflns.percent_possible_obs 97.26 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.069 _reflns.pdbx_netI_over_sigmaI 47.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.67 _reflns_shell.d_res_low 1.71 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 91.7 _reflns_shell.Rmerge_I_obs 0.659 _reflns_shell.meanI_over_sigI_obs 2.12 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 4.7 _reflns_shell.number_unique_all 2003 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3JXB _refine.ls_d_res_high 1.67 _refine.ls_d_res_low 19.90 _refine.pdbx_ls_sigma_F 1.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.260 _refine.ls_number_reflns_obs 27753 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.198 _refine.ls_R_factor_R_work 0.196 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.226 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1501 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 19.389 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.020 _refine.aniso_B[2][2] -0.040 _refine.aniso_B[3][3] 0.060 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.114 _refine.pdbx_overall_ESU_R_Free 0.109 _refine.overall_SU_ML 0.076 _refine.overall_SU_B 4.391 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 2R1J' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 67.64 _refine.B_iso_min 7.51 _refine.occupancy_max 1.00 _refine.occupancy_min 0.01 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1031 _refine_hist.pdbx_number_atoms_nucleic_acid 814 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 300 _refine_hist.number_atoms_total 2145 _refine_hist.d_res_high 1.67 _refine_hist.d_res_low 19.90 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1993 0.010 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2862 1.621 2.494 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 144 5.318 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 46 33.738 23.478 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 226 12.655 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13 7.156 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 322 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1217 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 842 0.207 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1315 0.299 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 230 0.134 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 41 0.234 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 28 0.109 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 706 0.623 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1089 0.882 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1731 1.357 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1767 1.979 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.670 _refine_ls_shell.d_res_low 1.713 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 91.670 _refine_ls_shell.number_reflns_R_work 1897 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.276 _refine_ls_shell.R_factor_R_free 0.352 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 106 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2003 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3JXB _struct.title 'Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3JXB _struct_keywords.text 'protein-DNA complex, DNA-binding, Repressor, Transcription, Transcription regulation, TRANSCRIPTION REGULATOR' _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details 'Biological unit is the same as asymmetric unit.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU C 4 ? LEU C 16 ? LEU C 5 LEU C 17 1 ? 13 HELX_P HELX_P2 2 ARG C 19 ? GLY C 28 ? ARG C 20 GLY C 29 1 ? 10 HELX_P HELX_P3 3 SER C 30 ? ARG C 39 ? SER C 31 ARG C 40 1 ? 10 HELX_P HELX_P4 4 ASN C 45 ? GLN C 57 ? ASN C 46 GLN C 58 1 ? 13 HELX_P HELX_P5 5 SER C 59 ? GLY C 66 ? SER C 60 GLY C 67 1 ? 8 HELX_P HELX_P6 6 LEU D 4 ? LYS D 17 ? LEU D 5 LYS D 18 1 ? 14 HELX_P HELX_P7 7 ARG D 19 ? GLY D 28 ? ARG D 20 GLY D 29 1 ? 10 HELX_P HELX_P8 8 SER D 30 ? ARG D 39 ? SER D 31 ARG D 40 1 ? 10 HELX_P HELX_P9 9 ASN D 45 ? LEU D 56 ? ASN D 46 LEU D 57 1 ? 12 HELX_P HELX_P10 10 SER D 59 ? GLY D 66 ? SER D 60 GLY D 67 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 20 N2 ? ? A DC 1 B DG 40 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 19 N3 ? ? A DA 2 B DT 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 19 O4 ? ? A DA 2 B DT 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 18 N1 ? ? A DT 3 B DA 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 18 N6 ? ? A DT 3 B DA 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 17 N1 ? ? A DT 4 B DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 17 N6 ? ? A DT 4 B DA 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 16 N1 ? ? A DT 5 B DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 16 N6 ? ? A DT 5 B DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 15 N3 ? ? A DA 6 B DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 15 O4 ? ? A DA 6 B DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 14 N3 ? ? A DA 7 B DT 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 14 O4 ? ? A DA 7 B DT 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 13 N3 ? ? A DG 8 B DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 13 O2 ? ? A DG 8 B DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 13 N4 ? ? A DG 8 B DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 12 N3 ? ? A DA 9 B DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 12 O4 ? ? A DA 9 B DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 11 N1 ? ? A DC 10 B DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 11 O6 ? ? A DC 10 B DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 11 N2 ? ? A DC 10 B DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 10 N3 ? ? A DG 11 B DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 10 O2 ? ? A DG 11 B DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 10 N4 ? ? A DG 11 B DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 9 N1 ? ? A DT 12 B DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 9 N6 ? ? A DT 12 B DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 13 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 13 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 13 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 14 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 14 B DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 14 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 14 B DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 15 B DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 15 B DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 16 B DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 16 B DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 17 B DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 17 B DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DA 18 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 18 B DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 18 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 18 B DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DT 19 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 19 B DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DT 19 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 19 B DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DA 20 N1 ? ? ? 1_555 B DT 1 N3 ? ? A DA 20 B DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DA 20 N6 ? ? ? 1_555 B DT 1 O4 ? ? A DA 20 B DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 3JXB _atom_sites.fract_transf_matrix[1][1] 0.024629 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018410 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008763 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DA 2 2 2 DA A A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DG 8 8 8 DG G A . n A 1 9 DA 9 9 9 DA A A . n A 1 10 DC 10 10 10 DC C A . n A 1 11 DG 11 11 11 DG G A . n A 1 12 DT 12 12 12 DT T A . n A 1 13 DC 13 13 13 DC C A . n A 1 14 DT 14 14 14 DT T A . n A 1 15 DT 15 15 15 DT T A . n A 1 16 DA 16 16 16 DA A A . n A 1 17 DA 17 17 17 DA A A . n A 1 18 DA 18 18 18 DA A A . n A 1 19 DT 19 19 19 DT T A . n A 1 20 DA 20 20 20 DA A A . n B 2 1 DT 1 21 21 DT T B . n B 2 2 DA 2 22 22 DA A B . n B 2 3 DT 3 23 23 DT T B . n B 2 4 DT 4 24 24 DT T B . n B 2 5 DT 5 25 25 DT T B . n B 2 6 DA 6 26 26 DA A B . n B 2 7 DA 7 27 27 DA A B . n B 2 8 DG 8 28 28 DG G B . n B 2 9 DA 9 29 29 DA A B . n B 2 10 DC 10 30 30 DC C B . n B 2 11 DG 11 31 31 DG G B . n B 2 12 DT 12 32 32 DT T B . n B 2 13 DC 13 33 33 DC C B . n B 2 14 DT 14 34 34 DT T B . n B 2 15 DT 15 35 35 DT T B . n B 2 16 DA 16 36 36 DA A B . n B 2 17 DA 17 37 37 DA A B . n B 2 18 DA 18 38 38 DA A B . n B 2 19 DT 19 39 39 DT T B . n B 2 20 DG 20 40 40 DG G B . n C 3 1 ASN 1 2 2 ASN ASN C . n C 3 2 THR 2 3 3 THR THR C . n C 3 3 GLN 3 4 4 GLN GLN C . n C 3 4 LEU 4 5 5 LEU LEU C . n C 3 5 MET 5 6 6 MET MET C . n C 3 6 GLY 6 7 7 GLY GLY C . n C 3 7 GLU 7 8 8 GLU GLU C . n C 3 8 ARG 8 9 9 ARG ARG C . n C 3 9 ILE 9 10 10 ILE ILE C . n C 3 10 ARG 10 11 11 ARG ARG C . n C 3 11 ALA 11 12 12 ALA ALA C . n C 3 12 ARG 12 13 13 ARG ARG C . n C 3 13 ARG 13 14 14 ARG ARG C . n C 3 14 LYS 14 15 15 LYS LYS C . n C 3 15 LYS 15 16 16 LYS LYS C . n C 3 16 LEU 16 17 17 LEU LEU C . n C 3 17 LYS 17 18 18 LYS LYS C . n C 3 18 ILE 18 19 19 ILE ILE C . n C 3 19 ARG 19 20 20 ARG ARG C . n C 3 20 GLN 20 21 21 GLN GLN C . n C 3 21 ALA 21 22 22 ALA ALA C . n C 3 22 ALA 22 23 23 ALA ALA C . n C 3 23 LEU 23 24 24 LEU LEU C . n C 3 24 GLY 24 25 25 GLY GLY C . n C 3 25 LYS 25 26 26 LYS LYS C . n C 3 26 MET 26 27 27 MET MET C . n C 3 27 VAL 27 28 28 VAL VAL C . n C 3 28 GLY 28 29 29 GLY GLY C . n C 3 29 VAL 29 30 30 VAL VAL C . n C 3 30 SER 30 31 31 SER SER C . n C 3 31 ASN 31 32 32 ASN ASN C . n C 3 32 VAL 32 33 33 VAL VAL C . n C 3 33 ALA 33 34 34 ALA ALA C . n C 3 34 ILE 34 35 35 ILE ILE C . n C 3 35 SER 35 36 36 SER SER C . n C 3 36 GLN 36 37 37 GLN GLN C . n C 3 37 TRP 37 38 38 TRP TRP C . n C 3 38 GLU 38 39 39 GLU GLU C . n C 3 39 ARG 39 40 40 ARG ARG C . n C 3 40 SER 40 41 41 SER SER C . n C 3 41 GLU 41 42 42 GLU GLU C . n C 3 42 THR 42 43 43 THR THR C . n C 3 43 GLU 43 44 44 GLU GLU C . n C 3 44 PRO 44 45 45 PRO PRO C . n C 3 45 ASN 45 46 46 ASN ASN C . n C 3 46 GLY 46 47 47 GLY GLY C . n C 3 47 GLU 47 48 48 GLU GLU C . n C 3 48 ASN 48 49 49 ASN ASN C . n C 3 49 LEU 49 50 50 LEU LEU C . n C 3 50 LEU 50 51 51 LEU LEU C . n C 3 51 ALA 51 52 52 ALA ALA C . n C 3 52 LEU 52 53 53 LEU LEU C . n C 3 53 SER 53 54 54 SER SER C . n C 3 54 LYS 54 55 55 LYS LYS C . n C 3 55 ALA 55 56 56 ALA ALA C . n C 3 56 LEU 56 57 57 LEU LEU C . n C 3 57 GLN 57 58 58 GLN GLN C . n C 3 58 CYS 58 59 59 CYS CYS C . n C 3 59 SER 59 60 60 SER SER C . n C 3 60 PRO 60 61 61 PRO PRO C . n C 3 61 ASP 61 62 62 ASP ASP C . n C 3 62 TYR 62 63 63 TYR TYR C . n C 3 63 LEU 63 64 64 LEU LEU C . n C 3 64 LEU 64 65 65 LEU LEU C . n C 3 65 LYS 65 66 66 LYS LYS C . n C 3 66 GLY 66 67 67 GLY GLY C . n C 3 67 ASP 67 68 68 ASP ASP C . n D 3 1 ASN 1 2 ? ? ? D . n D 3 2 THR 2 3 ? ? ? D . n D 3 3 GLN 3 4 4 GLN GLN D . n D 3 4 LEU 4 5 5 LEU LEU D . n D 3 5 MET 5 6 6 MET MET D . n D 3 6 GLY 6 7 7 GLY GLY D . n D 3 7 GLU 7 8 8 GLU GLU D . n D 3 8 ARG 8 9 9 ARG ARG D . n D 3 9 ILE 9 10 10 ILE ILE D . n D 3 10 ARG 10 11 11 ARG ARG D . n D 3 11 ALA 11 12 12 ALA ALA D . n D 3 12 ARG 12 13 13 ARG ARG D . n D 3 13 ARG 13 14 14 ARG ARG D . n D 3 14 LYS 14 15 15 LYS LYS D . n D 3 15 LYS 15 16 16 LYS LYS D . n D 3 16 LEU 16 17 17 LEU LEU D . n D 3 17 LYS 17 18 18 LYS LYS D . n D 3 18 ILE 18 19 19 ILE ILE D . n D 3 19 ARG 19 20 20 ARG ARG D . n D 3 20 GLN 20 21 21 GLN GLN D . n D 3 21 ALA 21 22 22 ALA ALA D . n D 3 22 ALA 22 23 23 ALA ALA D . n D 3 23 LEU 23 24 24 LEU LEU D . n D 3 24 GLY 24 25 25 GLY GLY D . n D 3 25 LYS 25 26 26 LYS LYS D . n D 3 26 MET 26 27 27 MET MET D . n D 3 27 VAL 27 28 28 VAL VAL D . n D 3 28 GLY 28 29 29 GLY GLY D . n D 3 29 VAL 29 30 30 VAL VAL D . n D 3 30 SER 30 31 31 SER SER D . n D 3 31 ASN 31 32 32 ASN ASN D . n D 3 32 VAL 32 33 33 VAL VAL D . n D 3 33 ALA 33 34 34 ALA ALA D . n D 3 34 ILE 34 35 35 ILE ILE D . n D 3 35 SER 35 36 36 SER SER D . n D 3 36 GLN 36 37 37 GLN GLN D . n D 3 37 TRP 37 38 38 TRP TRP D . n D 3 38 GLU 38 39 39 GLU GLU D . n D 3 39 ARG 39 40 40 ARG ARG D . n D 3 40 SER 40 41 41 SER SER D . n D 3 41 GLU 41 42 42 GLU GLU D . n D 3 42 THR 42 43 43 THR THR D . n D 3 43 GLU 43 44 44 GLU GLU D . n D 3 44 PRO 44 45 45 PRO PRO D . n D 3 45 ASN 45 46 46 ASN ASN D . n D 3 46 GLY 46 47 47 GLY GLY D . n D 3 47 GLU 47 48 48 GLU GLU D . n D 3 48 ASN 48 49 49 ASN ASN D . n D 3 49 LEU 49 50 50 LEU LEU D . n D 3 50 LEU 50 51 51 LEU LEU D . n D 3 51 ALA 51 52 52 ALA ALA D . n D 3 52 LEU 52 53 53 LEU LEU D . n D 3 53 SER 53 54 54 SER SER D . n D 3 54 LYS 54 55 55 LYS LYS D . n D 3 55 ALA 55 56 56 ALA ALA D . n D 3 56 LEU 56 57 57 LEU LEU D . n D 3 57 GLN 57 58 58 GLN GLN D . n D 3 58 CYS 58 59 59 CYS CYS D . n D 3 59 SER 59 60 60 SER SER D . n D 3 60 PRO 60 61 61 PRO PRO D . n D 3 61 ASP 61 62 62 ASP ASP D . n D 3 62 TYR 62 63 63 TYR TYR D . n D 3 63 LEU 63 64 64 LEU LEU D . n D 3 64 LEU 64 65 65 LEU LEU D . n D 3 65 LYS 65 66 66 LYS LYS D . n D 3 66 GLY 66 67 67 GLY GLY D . n D 3 67 ASP 67 68 68 ASP ASP D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 21 17 HOH HOH A . E 4 HOH 2 23 23 HOH HOH A . E 4 HOH 3 29 29 HOH HOH A . E 4 HOH 4 31 31 HOH HOH A . E 4 HOH 5 32 32 HOH HOH A . E 4 HOH 6 34 34 HOH HOH A . E 4 HOH 7 36 36 HOH HOH A . E 4 HOH 8 39 39 HOH HOH A . E 4 HOH 9 42 42 HOH HOH A . E 4 HOH 10 47 47 HOH HOH A . E 4 HOH 11 59 59 HOH HOH A . E 4 HOH 12 74 74 HOH HOH A . E 4 HOH 13 79 79 HOH HOH A . E 4 HOH 14 80 80 HOH HOH A . E 4 HOH 15 86 86 HOH HOH A . E 4 HOH 16 88 88 HOH HOH A . E 4 HOH 17 90 90 HOH HOH A . E 4 HOH 18 111 111 HOH HOH A . E 4 HOH 19 120 120 HOH HOH A . E 4 HOH 20 122 122 HOH HOH A . E 4 HOH 21 123 123 HOH HOH A . E 4 HOH 22 126 126 HOH HOH A . E 4 HOH 23 129 129 HOH HOH A . E 4 HOH 24 130 130 HOH HOH A . E 4 HOH 25 139 139 HOH HOH A . E 4 HOH 26 140 140 HOH HOH A . E 4 HOH 27 141 141 HOH HOH A . E 4 HOH 28 146 146 HOH HOH A . E 4 HOH 29 147 147 HOH HOH A . E 4 HOH 30 148 148 HOH HOH A . E 4 HOH 31 149 149 HOH HOH A . E 4 HOH 32 150 150 HOH HOH A . E 4 HOH 33 151 151 HOH HOH A . E 4 HOH 34 159 159 HOH HOH A . E 4 HOH 35 167 167 HOH HOH A . E 4 HOH 36 172 172 HOH HOH A . E 4 HOH 37 176 176 HOH HOH A . E 4 HOH 38 177 177 HOH HOH A . E 4 HOH 39 186 186 HOH HOH A . E 4 HOH 40 187 187 HOH HOH A . E 4 HOH 41 188 188 HOH HOH A . E 4 HOH 42 189 189 HOH HOH A . E 4 HOH 43 199 199 HOH HOH A . E 4 HOH 44 212 212 HOH HOH A . E 4 HOH 45 214 214 HOH HOH A . E 4 HOH 46 221 221 HOH HOH A . E 4 HOH 47 222 222 HOH HOH A . E 4 HOH 48 234 234 HOH HOH A . E 4 HOH 49 235 235 HOH HOH A . E 4 HOH 50 237 237 HOH HOH A . E 4 HOH 51 242 242 HOH HOH A . E 4 HOH 52 243 243 HOH HOH A . E 4 HOH 53 247 247 HOH HOH A . E 4 HOH 54 249 249 HOH HOH A . E 4 HOH 55 251 251 HOH HOH A . E 4 HOH 56 258 258 HOH HOH A . E 4 HOH 57 259 259 HOH HOH A . E 4 HOH 58 263 263 HOH HOH A . E 4 HOH 59 264 264 HOH HOH A . E 4 HOH 60 268 268 HOH HOH A . E 4 HOH 61 271 271 HOH HOH A . E 4 HOH 62 272 272 HOH HOH A . E 4 HOH 63 273 273 HOH HOH A . E 4 HOH 64 274 274 HOH HOH A . E 4 HOH 65 282 282 HOH HOH A . E 4 HOH 66 288 288 HOH HOH A . E 4 HOH 67 289 289 HOH HOH A . E 4 HOH 68 290 290 HOH HOH A . E 4 HOH 69 299 299 HOH HOH A . E 4 HOH 70 300 300 HOH HOH A . F 4 HOH 1 1 1 HOH HOH B . F 4 HOH 2 7 7 HOH HOH B . F 4 HOH 3 13 13 HOH HOH B . F 4 HOH 4 16 16 HOH HOH B . F 4 HOH 5 41 22 HOH HOH B . F 4 HOH 6 42 24 HOH HOH B . F 4 HOH 7 43 43 HOH HOH B . F 4 HOH 8 44 27 HOH HOH B . F 4 HOH 9 45 38 HOH HOH B . F 4 HOH 10 49 49 HOH HOH B . F 4 HOH 11 50 50 HOH HOH B . F 4 HOH 12 52 52 HOH HOH B . F 4 HOH 13 53 53 HOH HOH B . F 4 HOH 14 55 55 HOH HOH B . F 4 HOH 15 63 63 HOH HOH B . F 4 HOH 16 71 71 HOH HOH B . F 4 HOH 17 72 72 HOH HOH B . F 4 HOH 18 73 73 HOH HOH B . F 4 HOH 19 75 75 HOH HOH B . F 4 HOH 20 78 78 HOH HOH B . F 4 HOH 21 83 83 HOH HOH B . F 4 HOH 22 87 87 HOH HOH B . F 4 HOH 23 96 96 HOH HOH B . F 4 HOH 24 101 101 HOH HOH B . F 4 HOH 25 107 107 HOH HOH B . F 4 HOH 26 115 115 HOH HOH B . F 4 HOH 27 116 116 HOH HOH B . F 4 HOH 28 117 117 HOH HOH B . F 4 HOH 29 124 124 HOH HOH B . F 4 HOH 30 125 125 HOH HOH B . F 4 HOH 31 127 127 HOH HOH B . F 4 HOH 32 128 128 HOH HOH B . F 4 HOH 33 131 131 HOH HOH B . F 4 HOH 34 133 133 HOH HOH B . F 4 HOH 35 136 136 HOH HOH B . F 4 HOH 36 137 137 HOH HOH B . F 4 HOH 37 152 152 HOH HOH B . F 4 HOH 38 154 154 HOH HOH B . F 4 HOH 39 156 156 HOH HOH B . F 4 HOH 40 168 168 HOH HOH B . F 4 HOH 41 170 170 HOH HOH B . F 4 HOH 42 173 173 HOH HOH B . F 4 HOH 43 174 174 HOH HOH B . F 4 HOH 44 179 179 HOH HOH B . F 4 HOH 45 180 180 HOH HOH B . F 4 HOH 46 182 182 HOH HOH B . F 4 HOH 47 183 183 HOH HOH B . F 4 HOH 48 185 185 HOH HOH B . F 4 HOH 49 190 190 HOH HOH B . F 4 HOH 50 201 201 HOH HOH B . F 4 HOH 51 225 225 HOH HOH B . F 4 HOH 52 226 226 HOH HOH B . F 4 HOH 53 227 227 HOH HOH B . F 4 HOH 54 229 229 HOH HOH B . F 4 HOH 55 231 231 HOH HOH B . F 4 HOH 56 232 232 HOH HOH B . F 4 HOH 57 233 233 HOH HOH B . F 4 HOH 58 238 238 HOH HOH B . F 4 HOH 59 240 240 HOH HOH B . F 4 HOH 60 244 244 HOH HOH B . F 4 HOH 61 245 245 HOH HOH B . F 4 HOH 62 248 248 HOH HOH B . F 4 HOH 63 252 252 HOH HOH B . F 4 HOH 64 260 260 HOH HOH B . F 4 HOH 65 266 266 HOH HOH B . F 4 HOH 66 270 270 HOH HOH B . F 4 HOH 67 275 275 HOH HOH B . F 4 HOH 68 277 277 HOH HOH B . F 4 HOH 69 279 279 HOH HOH B . F 4 HOH 70 285 285 HOH HOH B . F 4 HOH 71 291 291 HOH HOH B . G 4 HOH 1 69 69 HOH HOH C . G 4 HOH 2 70 5 HOH HOH C . G 4 HOH 3 71 6 HOH HOH C . G 4 HOH 4 72 8 HOH HOH C . G 4 HOH 5 73 9 HOH HOH C . G 4 HOH 6 74 10 HOH HOH C . G 4 HOH 7 75 14 HOH HOH C . G 4 HOH 8 76 15 HOH HOH C . G 4 HOH 9 77 19 HOH HOH C . G 4 HOH 10 78 21 HOH HOH C . G 4 HOH 11 79 25 HOH HOH C . G 4 HOH 12 80 28 HOH HOH C . G 4 HOH 13 81 81 HOH HOH C . G 4 HOH 14 82 82 HOH HOH C . G 4 HOH 15 83 33 HOH HOH C . G 4 HOH 16 84 35 HOH HOH C . G 4 HOH 17 85 85 HOH HOH C . G 4 HOH 18 86 40 HOH HOH C . G 4 HOH 19 87 44 HOH HOH C . G 4 HOH 20 88 51 HOH HOH C . G 4 HOH 21 89 54 HOH HOH C . G 4 HOH 22 90 56 HOH HOH C . G 4 HOH 23 91 91 HOH HOH C . G 4 HOH 24 92 58 HOH HOH C . G 4 HOH 25 93 93 HOH HOH C . G 4 HOH 26 94 94 HOH HOH C . G 4 HOH 27 95 95 HOH HOH C . G 4 HOH 28 96 64 HOH HOH C . G 4 HOH 29 97 97 HOH HOH C . G 4 HOH 30 98 98 HOH HOH C . G 4 HOH 31 99 65 HOH HOH C . G 4 HOH 32 100 67 HOH HOH C . G 4 HOH 33 102 102 HOH HOH C . G 4 HOH 34 103 103 HOH HOH C . G 4 HOH 35 105 105 HOH HOH C . G 4 HOH 36 106 106 HOH HOH C . G 4 HOH 37 109 109 HOH HOH C . G 4 HOH 38 110 110 HOH HOH C . G 4 HOH 39 118 118 HOH HOH C . G 4 HOH 40 153 153 HOH HOH C . G 4 HOH 41 155 155 HOH HOH C . G 4 HOH 42 157 157 HOH HOH C . G 4 HOH 43 158 158 HOH HOH C . G 4 HOH 44 160 160 HOH HOH C . G 4 HOH 45 161 161 HOH HOH C . G 4 HOH 46 162 162 HOH HOH C . G 4 HOH 47 163 163 HOH HOH C . G 4 HOH 48 164 164 HOH HOH C . G 4 HOH 49 165 165 HOH HOH C . G 4 HOH 50 166 166 HOH HOH C . G 4 HOH 51 191 191 HOH HOH C . G 4 HOH 52 192 192 HOH HOH C . G 4 HOH 53 193 193 HOH HOH C . G 4 HOH 54 194 194 HOH HOH C . G 4 HOH 55 195 195 HOH HOH C . G 4 HOH 56 196 196 HOH HOH C . G 4 HOH 57 197 197 HOH HOH C . G 4 HOH 58 198 198 HOH HOH C . G 4 HOH 59 200 200 HOH HOH C . G 4 HOH 60 202 202 HOH HOH C . G 4 HOH 61 203 203 HOH HOH C . G 4 HOH 62 204 204 HOH HOH C . G 4 HOH 63 211 211 HOH HOH C . G 4 HOH 64 215 215 HOH HOH C . G 4 HOH 65 216 216 HOH HOH C . G 4 HOH 66 217 217 HOH HOH C . G 4 HOH 67 219 219 HOH HOH C . G 4 HOH 68 228 228 HOH HOH C . G 4 HOH 69 230 230 HOH HOH C . G 4 HOH 70 236 236 HOH HOH C . G 4 HOH 71 239 239 HOH HOH C . G 4 HOH 72 241 241 HOH HOH C . G 4 HOH 73 246 246 HOH HOH C . G 4 HOH 74 253 253 HOH HOH C . G 4 HOH 75 262 262 HOH HOH C . G 4 HOH 76 265 265 HOH HOH C . G 4 HOH 77 267 267 HOH HOH C . G 4 HOH 78 276 276 HOH HOH C . G 4 HOH 79 278 278 HOH HOH C . G 4 HOH 80 280 280 HOH HOH C . G 4 HOH 81 281 281 HOH HOH C . G 4 HOH 82 283 283 HOH HOH C . G 4 HOH 83 284 284 HOH HOH C . G 4 HOH 84 294 294 HOH HOH C . G 4 HOH 85 296 296 HOH HOH C . G 4 HOH 86 297 297 HOH HOH C . G 4 HOH 87 298 298 HOH HOH C . H 4 HOH 1 69 2 HOH HOH D . H 4 HOH 2 70 70 HOH HOH D . H 4 HOH 3 71 4 HOH HOH D . H 4 HOH 4 72 11 HOH HOH D . H 4 HOH 5 73 12 HOH HOH D . H 4 HOH 6 74 18 HOH HOH D . H 4 HOH 7 75 20 HOH HOH D . H 4 HOH 8 76 76 HOH HOH D . H 4 HOH 9 77 77 HOH HOH D . H 4 HOH 10 78 26 HOH HOH D . H 4 HOH 11 79 30 HOH HOH D . H 4 HOH 12 80 37 HOH HOH D . H 4 HOH 13 81 41 HOH HOH D . H 4 HOH 14 82 45 HOH HOH D . H 4 HOH 15 83 46 HOH HOH D . H 4 HOH 16 84 84 HOH HOH D . H 4 HOH 17 85 48 HOH HOH D . H 4 HOH 18 86 57 HOH HOH D . H 4 HOH 19 87 60 HOH HOH D . H 4 HOH 20 88 61 HOH HOH D . H 4 HOH 21 89 89 HOH HOH D . H 4 HOH 22 90 62 HOH HOH D . H 4 HOH 23 91 66 HOH HOH D . H 4 HOH 24 92 92 HOH HOH D . H 4 HOH 25 93 68 HOH HOH D . H 4 HOH 26 94 3 HOH HOH D . H 4 HOH 27 99 99 HOH HOH D . H 4 HOH 28 100 100 HOH HOH D . H 4 HOH 29 104 104 HOH HOH D . H 4 HOH 30 108 108 HOH HOH D . H 4 HOH 31 112 112 HOH HOH D . H 4 HOH 32 113 113 HOH HOH D . H 4 HOH 33 114 114 HOH HOH D . H 4 HOH 34 119 119 HOH HOH D . H 4 HOH 35 121 121 HOH HOH D . H 4 HOH 36 132 132 HOH HOH D . H 4 HOH 37 134 134 HOH HOH D . H 4 HOH 38 135 135 HOH HOH D . H 4 HOH 39 138 138 HOH HOH D . H 4 HOH 40 142 142 HOH HOH D . H 4 HOH 41 143 143 HOH HOH D . H 4 HOH 42 144 144 HOH HOH D . H 4 HOH 43 145 145 HOH HOH D . H 4 HOH 44 169 169 HOH HOH D . H 4 HOH 45 171 171 HOH HOH D . H 4 HOH 46 175 175 HOH HOH D . H 4 HOH 47 178 178 HOH HOH D . H 4 HOH 48 181 181 HOH HOH D . H 4 HOH 49 184 184 HOH HOH D . H 4 HOH 50 205 205 HOH HOH D . H 4 HOH 51 206 206 HOH HOH D . H 4 HOH 52 207 207 HOH HOH D . H 4 HOH 53 208 208 HOH HOH D . H 4 HOH 54 209 209 HOH HOH D . H 4 HOH 55 210 210 HOH HOH D . H 4 HOH 56 213 213 HOH HOH D . H 4 HOH 57 218 218 HOH HOH D . H 4 HOH 58 220 220 HOH HOH D . H 4 HOH 59 223 223 HOH HOH D . H 4 HOH 60 224 224 HOH HOH D . H 4 HOH 61 250 250 HOH HOH D . H 4 HOH 62 254 254 HOH HOH D . H 4 HOH 63 255 255 HOH HOH D . H 4 HOH 64 256 256 HOH HOH D . H 4 HOH 65 257 257 HOH HOH D . H 4 HOH 66 261 261 HOH HOH D . H 4 HOH 67 269 269 HOH HOH D . H 4 HOH 68 286 286 HOH HOH D . H 4 HOH 69 287 287 HOH HOH D . H 4 HOH 70 292 292 HOH HOH D . H 4 HOH 71 293 293 HOH HOH D . H 4 HOH 72 295 295 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5370 ? 1 MORE -40.7 ? 1 'SSA (A^2)' 12040 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq.db_align_beg' 4 3 'Structure model' '_struct_ref_seq.db_align_end' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 2.2170 -5.7382 -30.8765 0.1225 0.2323 0.0761 0.0088 -0.0226 0.0169 3.1043 4.0237 8.9367 -3.3718 -1.8082 0.2760 -0.0243 -0.1106 0.1349 0.3897 -0.2267 0.3422 -0.2439 0.5432 -0.7128 'X-RAY DIFFRACTION' 2 ? refined -4.1011 0.8754 -15.0355 0.0448 0.2204 0.0755 0.1342 0.0218 0.0102 6.4062 3.3919 18.3613 -3.8345 -0.9595 -3.8956 0.5242 0.0569 -0.5810 -0.3370 -0.1906 0.3456 0.4590 -0.7685 -0.9665 'X-RAY DIFFRACTION' 3 ? refined 8.6967 4.1224 -2.0141 0.1373 0.0425 0.1165 0.0820 0.0489 0.0559 3.1413 4.2652 6.3965 -0.6858 0.0976 2.2680 0.2608 -0.1990 -0.0618 0.0910 0.3788 -0.1716 -0.2830 -0.7541 -0.5414 'X-RAY DIFFRACTION' 4 ? refined 8.5749 9.3794 15.0455 0.3554 0.2138 0.1957 0.0882 -0.0287 -0.0707 3.2056 1.7093 7.8570 -1.4496 1.1956 -1.6426 0.0087 0.1401 -0.1488 -0.5506 0.5065 -0.0759 0.2117 -1.2372 -0.3479 'X-RAY DIFFRACTION' 5 ? refined 15.9530 3.9950 14.2634 0.1768 0.1713 0.2075 -0.0344 -0.0960 -0.0624 1.8504 0.0265 9.9321 -0.2215 -4.2870 0.5131 0.0205 0.1651 -0.1857 -0.6885 0.2914 -0.3183 0.1323 -0.8631 0.6466 'X-RAY DIFFRACTION' 6 ? refined 3.5429 7.9486 1.5955 0.1717 0.1577 0.1621 0.1256 -0.0371 -0.0064 2.1623 6.0891 13.4966 -2.5335 1.0011 -1.5129 0.0739 0.0464 -0.1204 -0.2412 0.2645 0.2132 -0.3619 -1.1988 -1.1157 'X-RAY DIFFRACTION' 7 ? refined 0.8557 -3.5462 -16.1261 0.0286 0.1801 0.0632 0.0482 0.0293 0.0508 4.9672 0.7011 4.5572 -0.6535 2.0521 0.1761 -0.0139 -0.0003 0.0142 -0.1773 0.0149 0.1167 0.1199 -0.2171 -0.6935 'X-RAY DIFFRACTION' 8 ? refined -4.1928 -2.1530 -32.2896 0.1506 0.5464 0.1120 0.0173 -0.0638 -0.0234 23.5202 10.3483 26.1594 6.8712 -23.4313 -11.6922 0.0367 0.2150 -0.2517 2.0746 0.3017 0.0792 -0.6362 -0.1886 -1.7625 'X-RAY DIFFRACTION' 9 ? refined 13.0595 -14.7016 4.5652 0.1019 0.0403 0.1032 -0.0530 -0.0235 0.0749 3.4851 29.1425 6.1415 -0.1703 1.1386 4.2294 0.4213 -0.4115 -0.0098 -0.4369 -0.3059 0.6409 -0.1038 0.6891 -0.2830 'X-RAY DIFFRACTION' 10 ? refined 20.6104 -9.8380 6.3873 0.0236 -0.0060 0.0978 0.0423 -0.0005 0.0427 5.8165 7.3983 8.4488 1.2052 -0.1896 0.7798 -0.0190 0.0734 -0.0544 -0.2924 0.0537 -0.3222 0.0744 0.3365 0.4441 'X-RAY DIFFRACTION' 11 ? refined 26.5534 -6.8599 11.0350 0.0534 0.1984 0.1823 0.0203 -0.0399 0.0603 6.9563 17.3210 19.2464 0.3555 0.1424 -10.2523 0.2336 -0.7414 0.5079 0.0703 0.4372 -0.7955 0.5285 -0.1278 0.9247 'X-RAY DIFFRACTION' 12 ? refined 21.9537 1.0550 7.5766 -0.0108 0.0251 0.2125 -0.0382 -0.0137 -0.0445 3.6914 11.9754 12.0336 3.0102 -3.5742 1.3620 0.0828 0.1565 -0.2393 -0.4366 0.1525 -1.0678 0.2639 -0.3849 0.2613 'X-RAY DIFFRACTION' 13 ? refined 23.4155 2.7873 0.2209 0.1131 -0.0162 0.1918 -0.1236 0.0896 0.0153 41.8095 15.1315 12.8280 -6.3411 7.1692 5.5901 -0.0548 0.3325 -0.2776 -0.3596 0.5411 -0.6527 -0.0066 -0.7898 0.6113 'X-RAY DIFFRACTION' 14 ? refined 13.6096 -0.8021 4.4767 0.0295 -0.0278 0.0894 0.0115 0.0117 0.0089 3.8668 4.5086 6.0614 0.1296 -0.9791 1.0808 0.0771 0.0094 -0.0866 -0.2622 0.3473 -0.2690 0.0808 -0.4702 -0.1238 'X-RAY DIFFRACTION' 15 ? refined 12.4418 -4.0908 -3.2114 0.0116 -0.0343 0.0829 0.0257 0.0141 0.0429 7.4188 1.1895 15.6552 1.0350 -5.1393 -2.6395 0.0494 0.0415 -0.0909 0.2081 0.1853 -0.1279 -0.1119 -0.1091 -0.6179 'X-RAY DIFFRACTION' 16 ? refined 21.2354 -5.3647 -5.3476 -0.0161 0.0059 0.0862 0.0076 0.0187 0.0335 2.4607 4.0414 8.6876 -0.2582 1.0044 -2.0818 0.2845 -0.0828 -0.2017 0.1553 0.0359 -0.1647 -0.0923 -0.0991 0.5704 'X-RAY DIFFRACTION' 17 ? refined 24.3533 -11.1340 -2.2157 0.0247 0.1314 0.1350 0.0832 -0.0035 0.0246 5.8455 7.9282 6.1727 4.7323 -0.1798 -0.6391 0.0315 0.1163 -0.1478 0.0328 -0.0769 -0.2580 0.1406 0.4100 0.9661 'X-RAY DIFFRACTION' 18 ? refined 16.7280 -16.5586 -3.3977 0.1340 -0.0043 0.0638 0.0159 0.0116 0.0304 21.5838 33.1208 23.3222 6.6663 13.1322 5.3480 0.1183 0.2487 -0.3669 0.5612 -0.7677 0.2941 -0.7003 1.4213 0.3747 'X-RAY DIFFRACTION' 19 ? refined 19.9961 -0.9440 -23.3104 0.0674 0.1772 0.0947 0.0034 0.0563 0.0956 17.3251 7.0608 6.3697 1.7274 0.2941 5.9242 -0.0531 0.1595 -0.1065 0.5917 0.6145 -0.0616 -0.5207 -0.4630 0.5552 'X-RAY DIFFRACTION' 20 ? refined 16.8599 -8.4503 -26.7809 0.0734 0.1519 0.0855 0.0705 0.0698 0.0190 4.5329 3.0881 7.6666 1.0445 3.8423 -2.6581 0.2148 -0.1341 -0.0806 0.4149 -0.1637 -0.3427 -0.3873 0.1133 0.3907 'X-RAY DIFFRACTION' 21 ? refined 17.1633 -13.9354 -30.6602 0.2818 0.2662 0.1704 0.0896 0.1068 -0.0424 10.2357 14.9131 0.7572 -5.9295 0.5272 2.4012 -0.0781 -0.0315 0.1096 0.6266 -0.4725 -0.3065 -0.0779 0.9592 0.8517 'X-RAY DIFFRACTION' 22 ? refined 8.1739 -9.2128 -22.4968 0.0382 0.0735 0.0234 0.0258 0.0089 0.0251 3.1966 4.8525 4.1800 -0.2995 0.0704 -1.6775 0.0757 -0.0966 0.0209 0.2523 -0.1382 0.0946 -0.2781 0.3440 -0.1685 'X-RAY DIFFRACTION' 23 ? refined 11.1139 -4.7932 -13.4650 -0.0127 0.0179 0.0516 0.0290 0.0428 0.0487 3.6896 12.3791 14.7973 -6.3645 6.1654 -9.0836 0.0286 0.1022 -0.1308 0.2059 0.0015 0.0025 0.1060 -0.0957 -0.3551 'X-RAY DIFFRACTION' 24 ? refined 15.4594 -11.0830 -13.6499 0.0362 0.0234 0.0602 0.0472 0.0071 0.0353 2.4205 2.8202 7.5949 1.0622 -3.3563 1.1585 0.1216 0.0538 -0.1753 0.0660 -0.1194 -0.2625 -0.2766 0.2789 -0.0683 'X-RAY DIFFRACTION' 25 ? refined 21.0975 -12.7958 -17.5942 0.0878 0.1416 0.1297 0.1013 0.0133 -0.0115 7.5363 8.1050 5.4202 5.7150 2.1633 1.4743 0.2134 0.0685 -0.2819 0.3271 -0.4279 -0.4271 0.1994 0.5270 0.4826 'X-RAY DIFFRACTION' 26 ? refined 24.8270 -4.6235 -17.8656 -0.0385 0.2462 0.1020 0.0118 0.0151 0.0297 12.5670 15.3988 18.1188 -1.2880 -4.9099 -5.2404 0.1675 -0.0279 -0.1396 -0.4164 0.1885 -0.9150 0.6184 -0.0421 1.0054 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 5 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 6 A 10 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 11 A 15 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 16 A 20 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 B 21 B 24 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 B 25 B 30 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 B 31 B 36 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 B 37 B 40 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 C 3 C 8 ? . . . . ? 'X-RAY DIFFRACTION' 10 10 C 9 C 14 ? . . . . ? 'X-RAY DIFFRACTION' 11 11 C 15 C 19 ? . . . . ? 'X-RAY DIFFRACTION' 12 12 C 20 C 25 ? . . . . ? 'X-RAY DIFFRACTION' 13 13 C 26 C 30 ? . . . . ? 'X-RAY DIFFRACTION' 14 14 C 31 C 40 ? . . . . ? 'X-RAY DIFFRACTION' 15 15 C 41 C 48 ? . . . . ? 'X-RAY DIFFRACTION' 16 16 C 49 C 54 ? . . . . ? 'X-RAY DIFFRACTION' 17 17 C 55 C 63 ? . . . . ? 'X-RAY DIFFRACTION' 18 18 C 64 C 68 ? . . . . ? 'X-RAY DIFFRACTION' 19 19 D 4 D 9 ? . . . . ? 'X-RAY DIFFRACTION' 20 20 D 10 D 14 ? . . . . ? 'X-RAY DIFFRACTION' 21 21 D 15 D 19 ? . . . . ? 'X-RAY DIFFRACTION' 22 22 D 20 D 41 ? . . . . ? 'X-RAY DIFFRACTION' 23 23 D 42 D 48 ? . . . . ? 'X-RAY DIFFRACTION' 24 24 D 49 D 53 ? . . . . ? 'X-RAY DIFFRACTION' 25 25 D 54 D 62 ? . . . . ? 'X-RAY DIFFRACTION' 26 26 D 63 D 68 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 4 DENZO . ? ? ? ? 'data reduction' ? ? ? 5 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 6 MOLREP . ? ? ? ? phasing ? ? ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 14 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 14 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.378 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.041 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 102.26 108.00 -5.74 0.70 N 2 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 102.01 108.00 -5.99 0.70 N 3 1 "C3'" A DC 10 ? ? "O3'" A DC 10 ? ? P A DG 11 ? ? 127.75 119.70 8.05 1.20 Y 4 1 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? "C2'" A DT 14 ? ? 110.58 106.80 3.78 0.50 N 5 1 N3 A DT 15 ? ? C4 A DT 15 ? ? O4 A DT 15 ? ? 124.74 119.90 4.84 0.60 N 6 1 C5 A DT 15 ? ? C4 A DT 15 ? ? O4 A DT 15 ? ? 118.93 124.90 -5.97 0.70 N 7 1 "O4'" A DA 20 ? ? "C1'" A DA 20 ? ? N9 A DA 20 ? ? 114.53 108.30 6.23 0.30 N 8 1 "O4'" B DT 24 ? ? "C1'" B DT 24 ? ? N1 B DT 24 ? ? 103.32 108.00 -4.68 0.70 N 9 1 "O4'" B DT 25 ? ? "C1'" B DT 25 ? ? N1 B DT 25 ? ? 103.13 108.00 -4.87 0.70 N # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 D _pdbx_validate_peptide_omega.auth_seq_id_1 67 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASP _pdbx_validate_peptide_omega.auth_asym_id_2 D _pdbx_validate_peptide_omega.auth_seq_id_2 68 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 141.64 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D ASN 2 ? D ASN 1 2 1 Y 1 D THR 3 ? D THR 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HOH O O N N 280 HOH H1 H N N 281 HOH H2 H N N 282 ILE N N N N 283 ILE CA C N S 284 ILE C C N N 285 ILE O O N N 286 ILE CB C N S 287 ILE CG1 C N N 288 ILE CG2 C N N 289 ILE CD1 C N N 290 ILE OXT O N N 291 ILE H H N N 292 ILE H2 H N N 293 ILE HA H N N 294 ILE HB H N N 295 ILE HG12 H N N 296 ILE HG13 H N N 297 ILE HG21 H N N 298 ILE HG22 H N N 299 ILE HG23 H N N 300 ILE HD11 H N N 301 ILE HD12 H N N 302 ILE HD13 H N N 303 ILE HXT H N N 304 LEU N N N N 305 LEU CA C N S 306 LEU C C N N 307 LEU O O N N 308 LEU CB C N N 309 LEU CG C N N 310 LEU CD1 C N N 311 LEU CD2 C N N 312 LEU OXT O N N 313 LEU H H N N 314 LEU H2 H N N 315 LEU HA H N N 316 LEU HB2 H N N 317 LEU HB3 H N N 318 LEU HG H N N 319 LEU HD11 H N N 320 LEU HD12 H N N 321 LEU HD13 H N N 322 LEU HD21 H N N 323 LEU HD22 H N N 324 LEU HD23 H N N 325 LEU HXT H N N 326 LYS N N N N 327 LYS CA C N S 328 LYS C C N N 329 LYS O O N N 330 LYS CB C N N 331 LYS CG C N N 332 LYS CD C N N 333 LYS CE C N N 334 LYS NZ N N N 335 LYS OXT O N N 336 LYS H H N N 337 LYS H2 H N N 338 LYS HA H N N 339 LYS HB2 H N N 340 LYS HB3 H N N 341 LYS HG2 H N N 342 LYS HG3 H N N 343 LYS HD2 H N N 344 LYS HD3 H N N 345 LYS HE2 H N N 346 LYS HE3 H N N 347 LYS HZ1 H N N 348 LYS HZ2 H N N 349 LYS HZ3 H N N 350 LYS HXT H N N 351 MET N N N N 352 MET CA C N S 353 MET C C N N 354 MET O O N N 355 MET CB C N N 356 MET CG C N N 357 MET SD S N N 358 MET CE C N N 359 MET OXT O N N 360 MET H H N N 361 MET H2 H N N 362 MET HA H N N 363 MET HB2 H N N 364 MET HB3 H N N 365 MET HG2 H N N 366 MET HG3 H N N 367 MET HE1 H N N 368 MET HE2 H N N 369 MET HE3 H N N 370 MET HXT H N N 371 PRO N N N N 372 PRO CA C N S 373 PRO C C N N 374 PRO O O N N 375 PRO CB C N N 376 PRO CG C N N 377 PRO CD C N N 378 PRO OXT O N N 379 PRO H H N N 380 PRO HA H N N 381 PRO HB2 H N N 382 PRO HB3 H N N 383 PRO HG2 H N N 384 PRO HG3 H N N 385 PRO HD2 H N N 386 PRO HD3 H N N 387 PRO HXT H N N 388 SER N N N N 389 SER CA C N S 390 SER C C N N 391 SER O O N N 392 SER CB C N N 393 SER OG O N N 394 SER OXT O N N 395 SER H H N N 396 SER H2 H N N 397 SER HA H N N 398 SER HB2 H N N 399 SER HB3 H N N 400 SER HG H N N 401 SER HXT H N N 402 THR N N N N 403 THR CA C N S 404 THR C C N N 405 THR O O N N 406 THR CB C N R 407 THR OG1 O N N 408 THR CG2 C N N 409 THR OXT O N N 410 THR H H N N 411 THR H2 H N N 412 THR HA H N N 413 THR HB H N N 414 THR HG1 H N N 415 THR HG21 H N N 416 THR HG22 H N N 417 THR HG23 H N N 418 THR HXT H N N 419 TRP N N N N 420 TRP CA C N S 421 TRP C C N N 422 TRP O O N N 423 TRP CB C N N 424 TRP CG C Y N 425 TRP CD1 C Y N 426 TRP CD2 C Y N 427 TRP NE1 N Y N 428 TRP CE2 C Y N 429 TRP CE3 C Y N 430 TRP CZ2 C Y N 431 TRP CZ3 C Y N 432 TRP CH2 C Y N 433 TRP OXT O N N 434 TRP H H N N 435 TRP H2 H N N 436 TRP HA H N N 437 TRP HB2 H N N 438 TRP HB3 H N N 439 TRP HD1 H N N 440 TRP HE1 H N N 441 TRP HE3 H N N 442 TRP HZ2 H N N 443 TRP HZ3 H N N 444 TRP HH2 H N N 445 TRP HXT H N N 446 TYR N N N N 447 TYR CA C N S 448 TYR C C N N 449 TYR O O N N 450 TYR CB C N N 451 TYR CG C Y N 452 TYR CD1 C Y N 453 TYR CD2 C Y N 454 TYR CE1 C Y N 455 TYR CE2 C Y N 456 TYR CZ C Y N 457 TYR OH O N N 458 TYR OXT O N N 459 TYR H H N N 460 TYR H2 H N N 461 TYR HA H N N 462 TYR HB2 H N N 463 TYR HB3 H N N 464 TYR HD1 H N N 465 TYR HD2 H N N 466 TYR HE1 H N N 467 TYR HE2 H N N 468 TYR HH H N N 469 TYR HXT H N N 470 VAL N N N N 471 VAL CA C N S 472 VAL C C N N 473 VAL O O N N 474 VAL CB C N N 475 VAL CG1 C N N 476 VAL CG2 C N N 477 VAL OXT O N N 478 VAL H H N N 479 VAL H2 H N N 480 VAL HA H N N 481 VAL HB H N N 482 VAL HG11 H N N 483 VAL HG12 H N N 484 VAL HG13 H N N 485 VAL HG21 H N N 486 VAL HG22 H N N 487 VAL HG23 H N N 488 VAL HXT H N N 489 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 MET N CA sing N N 346 MET N H sing N N 347 MET N H2 sing N N 348 MET CA C sing N N 349 MET CA CB sing N N 350 MET CA HA sing N N 351 MET C O doub N N 352 MET C OXT sing N N 353 MET CB CG sing N N 354 MET CB HB2 sing N N 355 MET CB HB3 sing N N 356 MET CG SD sing N N 357 MET CG HG2 sing N N 358 MET CG HG3 sing N N 359 MET SD CE sing N N 360 MET CE HE1 sing N N 361 MET CE HE2 sing N N 362 MET CE HE3 sing N N 363 MET OXT HXT sing N N 364 PRO N CA sing N N 365 PRO N CD sing N N 366 PRO N H sing N N 367 PRO CA C sing N N 368 PRO CA CB sing N N 369 PRO CA HA sing N N 370 PRO C O doub N N 371 PRO C OXT sing N N 372 PRO CB CG sing N N 373 PRO CB HB2 sing N N 374 PRO CB HB3 sing N N 375 PRO CG CD sing N N 376 PRO CG HG2 sing N N 377 PRO CG HG3 sing N N 378 PRO CD HD2 sing N N 379 PRO CD HD3 sing N N 380 PRO OXT HXT sing N N 381 SER N CA sing N N 382 SER N H sing N N 383 SER N H2 sing N N 384 SER CA C sing N N 385 SER CA CB sing N N 386 SER CA HA sing N N 387 SER C O doub N N 388 SER C OXT sing N N 389 SER CB OG sing N N 390 SER CB HB2 sing N N 391 SER CB HB3 sing N N 392 SER OG HG sing N N 393 SER OXT HXT sing N N 394 THR N CA sing N N 395 THR N H sing N N 396 THR N H2 sing N N 397 THR CA C sing N N 398 THR CA CB sing N N 399 THR CA HA sing N N 400 THR C O doub N N 401 THR C OXT sing N N 402 THR CB OG1 sing N N 403 THR CB CG2 sing N N 404 THR CB HB sing N N 405 THR OG1 HG1 sing N N 406 THR CG2 HG21 sing N N 407 THR CG2 HG22 sing N N 408 THR CG2 HG23 sing N N 409 THR OXT HXT sing N N 410 TRP N CA sing N N 411 TRP N H sing N N 412 TRP N H2 sing N N 413 TRP CA C sing N N 414 TRP CA CB sing N N 415 TRP CA HA sing N N 416 TRP C O doub N N 417 TRP C OXT sing N N 418 TRP CB CG sing N N 419 TRP CB HB2 sing N N 420 TRP CB HB3 sing N N 421 TRP CG CD1 doub Y N 422 TRP CG CD2 sing Y N 423 TRP CD1 NE1 sing Y N 424 TRP CD1 HD1 sing N N 425 TRP CD2 CE2 doub Y N 426 TRP CD2 CE3 sing Y N 427 TRP NE1 CE2 sing Y N 428 TRP NE1 HE1 sing N N 429 TRP CE2 CZ2 sing Y N 430 TRP CE3 CZ3 doub Y N 431 TRP CE3 HE3 sing N N 432 TRP CZ2 CH2 doub Y N 433 TRP CZ2 HZ2 sing N N 434 TRP CZ3 CH2 sing Y N 435 TRP CZ3 HZ3 sing N N 436 TRP CH2 HH2 sing N N 437 TRP OXT HXT sing N N 438 TYR N CA sing N N 439 TYR N H sing N N 440 TYR N H2 sing N N 441 TYR CA C sing N N 442 TYR CA CB sing N N 443 TYR CA HA sing N N 444 TYR C O doub N N 445 TYR C OXT sing N N 446 TYR CB CG sing N N 447 TYR CB HB2 sing N N 448 TYR CB HB3 sing N N 449 TYR CG CD1 doub Y N 450 TYR CG CD2 sing Y N 451 TYR CD1 CE1 sing Y N 452 TYR CD1 HD1 sing N N 453 TYR CD2 CE2 doub Y N 454 TYR CD2 HD2 sing N N 455 TYR CE1 CZ doub Y N 456 TYR CE1 HE1 sing N N 457 TYR CE2 CZ sing Y N 458 TYR CE2 HE2 sing N N 459 TYR CZ OH sing N N 460 TYR OH HH sing N N 461 TYR OXT HXT sing N N 462 VAL N CA sing N N 463 VAL N H sing N N 464 VAL N H2 sing N N 465 VAL CA C sing N N 466 VAL CA CB sing N N 467 VAL CA HA sing N N 468 VAL C O doub N N 469 VAL C OXT sing N N 470 VAL CB CG1 sing N N 471 VAL CB CG2 sing N N 472 VAL CB HB sing N N 473 VAL CG1 HG11 sing N N 474 VAL CG1 HG12 sing N N 475 VAL CG1 HG13 sing N N 476 VAL CG2 HG21 sing N N 477 VAL CG2 HG22 sing N N 478 VAL CG2 HG23 sing N N 479 VAL OXT HXT sing N N 480 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3JXB 'double helix' 3JXB 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 20 1_555 -3.283 0.845 1.076 -7.725 -20.743 58.620 1 A_DC1:DG40_B A 1 ? B 40 ? ? ? 1 A DA 2 1_555 B DT 19 1_555 0.123 0.007 -0.077 -9.065 -15.461 9.872 2 A_DA2:DT39_B A 2 ? B 39 ? 20 1 1 A DT 3 1_555 B DA 18 1_555 -0.041 -0.181 0.321 -7.729 -14.552 0.425 3 A_DT3:DA38_B A 3 ? B 38 ? 20 1 1 A DT 4 1_555 B DA 17 1_555 -0.190 -0.038 0.095 -5.759 -13.892 1.658 4 A_DT4:DA37_B A 4 ? B 37 ? 20 1 1 A DT 5 1_555 B DA 16 1_555 -0.037 -0.184 0.028 -6.167 -11.688 -0.906 5 A_DT5:DA36_B A 5 ? B 36 ? 20 1 1 A DA 6 1_555 B DT 15 1_555 0.132 -0.153 -0.156 -9.006 -5.604 0.745 6 A_DA6:DT35_B A 6 ? B 35 ? 20 1 1 A DA 7 1_555 B DT 14 1_555 0.051 -0.098 0.195 4.828 -13.415 2.230 7 A_DA7:DT34_B A 7 ? B 34 ? 20 1 1 A DG 8 1_555 B DC 13 1_555 -0.025 -0.155 0.274 5.695 -15.892 -0.535 8 A_DG8:DC33_B A 8 ? B 33 ? 19 1 1 A DA 9 1_555 B DT 12 1_555 0.076 -0.095 0.124 5.326 -7.036 -3.888 9 A_DA9:DT32_B A 9 ? B 32 ? 20 1 1 A DC 10 1_555 B DG 11 1_555 0.353 -0.240 -0.169 12.127 -6.475 -0.443 10 A_DC10:DG31_B A 10 ? B 31 ? 19 1 1 A DG 11 1_555 B DC 10 1_555 -0.323 -0.140 -0.127 -13.483 -6.456 0.275 11 A_DG11:DC30_B A 11 ? B 30 ? 19 1 1 A DT 12 1_555 B DA 9 1_555 -0.198 -0.087 0.277 -6.616 -7.426 -0.014 12 A_DT12:DA29_B A 12 ? B 29 ? 20 1 1 A DC 13 1_555 B DG 8 1_555 0.265 -0.214 0.207 -7.013 -15.190 0.303 13 A_DC13:DG28_B A 13 ? B 28 ? 19 1 1 A DT 14 1_555 B DA 7 1_555 -0.102 -0.202 0.166 -6.217 -10.966 3.359 14 A_DT14:DA27_B A 14 ? B 27 ? 20 1 1 A DT 15 1_555 B DA 6 1_555 -0.185 -0.172 -0.054 7.308 -4.218 0.700 15 A_DT15:DA26_B A 15 ? B 26 ? 20 1 1 A DA 16 1_555 B DT 5 1_555 0.110 -0.116 -0.020 4.170 -10.980 1.010 16 A_DA16:DT25_B A 16 ? B 25 ? 20 1 1 A DA 17 1_555 B DT 4 1_555 0.119 -0.144 -0.025 2.195 -14.879 3.164 17 A_DA17:DT24_B A 17 ? B 24 ? 20 1 1 A DA 18 1_555 B DT 3 1_555 0.198 -0.110 0.082 2.783 -16.369 -0.184 18 A_DA18:DT23_B A 18 ? B 23 ? 20 1 1 A DT 19 1_555 B DA 2 1_555 -0.055 -0.196 -0.042 2.700 -16.324 4.681 19 A_DT19:DA22_B A 19 ? B 22 ? 20 1 1 A DA 20 1_555 B DT 1 1_555 0.155 0.019 -0.027 6.121 -5.378 -7.857 20 A_DA20:DT21_B A 20 ? B 21 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 20 1_555 A DA 2 1_555 B DT 19 1_555 -1.620 1.869 3.416 2.257 0.507 57.520 1.912 1.809 3.370 0.527 -2.344 57.563 1 AA_DC1DA2:DT39DG40_BB A 1 ? B 40 ? A 2 ? B 39 ? 1 A DA 2 1_555 B DT 19 1_555 A DT 3 1_555 B DA 18 1_555 -0.511 -0.607 3.152 -3.660 -2.579 30.226 -0.650 0.257 3.229 -4.912 6.970 30.548 2 AA_DA2DT3:DA38DT39_BB A 2 ? B 39 ? A 3 ? B 38 ? 1 A DT 3 1_555 B DA 18 1_555 A DT 4 1_555 B DA 17 1_555 -0.159 -0.399 3.129 2.373 -4.032 38.605 -0.128 0.517 3.138 -6.071 -3.573 38.877 3 AA_DT3DT4:DA37DA38_BB A 3 ? B 38 ? A 4 ? B 37 ? 1 A DT 4 1_555 B DA 17 1_555 A DT 5 1_555 B DA 16 1_555 -0.485 -0.431 3.250 -1.328 -1.721 35.564 -0.454 0.600 3.282 -2.814 2.172 35.628 4 AA_DT4DT5:DA36DA37_BB A 4 ? B 37 ? A 5 ? B 36 ? 1 A DT 5 1_555 B DA 16 1_555 A DA 6 1_555 B DT 15 1_555 0.366 0.009 3.353 1.012 3.238 36.514 -0.440 -0.440 3.350 5.153 -1.610 36.666 5 AA_DT5DA6:DT35DA36_BB A 5 ? B 36 ? A 6 ? B 35 ? 1 A DA 6 1_555 B DT 15 1_555 A DA 7 1_555 B DT 14 1_555 0.294 0.262 3.053 -2.802 10.430 29.979 -1.322 -1.019 2.939 19.389 5.209 31.823 6 AA_DA6DA7:DT34DT35_BB A 6 ? B 35 ? A 7 ? B 34 ? 1 A DA 7 1_555 B DT 14 1_555 A DG 8 1_555 B DC 13 1_555 0.484 -0.315 3.271 -1.233 5.899 33.690 -1.457 -1.015 3.153 10.078 2.106 34.209 7 AA_DA7DG8:DC33DT34_BB A 7 ? B 34 ? A 8 ? B 33 ? 1 A DG 8 1_555 B DC 13 1_555 A DA 9 1_555 B DT 12 1_555 -0.768 -0.261 3.253 -0.653 -3.352 37.936 0.024 1.094 3.276 -5.143 1.003 38.083 8 AA_DG8DA9:DT32DC33_BB A 8 ? B 33 ? A 9 ? B 32 ? 1 A DA 9 1_555 B DT 12 1_555 A DC 10 1_555 B DG 11 1_555 0.824 -0.525 3.154 3.856 -2.083 34.260 -0.568 -0.801 3.250 -3.518 -6.513 34.531 9 AA_DA9DC10:DG31DT32_BB A 9 ? B 32 ? A 10 ? B 31 ? 1 A DC 10 1_555 B DG 11 1_555 A DG 11 1_555 B DC 10 1_555 -0.014 -0.533 3.942 -0.054 -0.650 40.831 -0.678 0.014 3.950 -0.931 0.077 40.836 10 AA_DC10DG11:DC30DG31_BB A 10 ? B 31 ? A 11 ? B 30 ? 1 A DG 11 1_555 B DC 10 1_555 A DT 12 1_555 B DA 9 1_555 -0.689 -0.525 3.193 -4.202 -3.549 32.006 -0.318 0.496 3.292 -6.378 7.551 32.463 11 AA_DG11DT12:DA29DC30_BB A 11 ? B 30 ? A 12 ? B 29 ? 1 A DT 12 1_555 B DA 9 1_555 A DC 13 1_555 B DG 8 1_555 0.676 -0.304 3.264 1.287 -4.158 39.845 0.034 -0.839 3.298 -6.079 -1.881 40.072 12 AA_DT12DC13:DG28DA29_BB A 12 ? B 29 ? A 13 ? B 28 ? 1 A DC 13 1_555 B DG 8 1_555 A DT 14 1_555 B DA 7 1_555 -0.134 -0.584 3.305 1.548 5.298 34.054 -1.805 0.465 3.172 8.972 -2.622 34.486 13 AA_DC13DT14:DA27DG28_BB A 13 ? B 28 ? A 14 ? B 27 ? 1 A DT 14 1_555 B DA 7 1_555 A DT 15 1_555 B DA 6 1_555 -0.406 0.061 3.062 1.921 9.483 30.814 -1.468 1.051 2.922 17.318 -3.509 32.262 14 AA_DT14DT15:DA26DA27_BB A 14 ? B 27 ? A 15 ? B 26 ? 1 A DT 15 1_555 B DA 6 1_555 A DA 16 1_555 B DT 5 1_555 -0.185 -0.148 3.379 0.468 3.439 36.669 -0.716 0.359 3.350 5.451 -0.741 36.828 15 AA_DT15DA16:DT25DA26_BB A 15 ? B 26 ? A 16 ? B 25 ? 1 A DA 16 1_555 B DT 5 1_555 A DA 17 1_555 B DT 4 1_555 0.253 -0.478 3.229 1.133 -1.112 36.241 -0.613 -0.250 3.248 -1.787 -1.820 36.275 16 AA_DA16DA17:DT24DT25_BB A 16 ? B 25 ? A 17 ? B 24 ? 1 A DA 17 1_555 B DT 4 1_555 A DA 18 1_555 B DT 3 1_555 0.010 -0.330 3.205 -1.053 -2.158 38.421 -0.237 -0.143 3.217 -3.275 1.599 38.493 17 AA_DA17DA18:DT23DT24_BB A 17 ? B 24 ? A 18 ? B 23 ? 1 A DA 18 1_555 B DT 3 1_555 A DT 19 1_555 B DA 2 1_555 0.026 -0.864 3.199 1.224 3.570 28.211 -2.544 0.216 3.067 7.283 -2.498 28.457 18 AA_DA18DT19:DA22DT23_BB A 18 ? B 23 ? A 19 ? B 22 ? 1 A DT 19 1_555 B DA 2 1_555 A DA 20 1_555 B DT 1 1_555 0.129 -0.142 3.241 2.649 10.607 28.879 -2.307 0.266 3.002 20.369 -5.087 30.837 19 AA_DT19DA20:DT21DA22_BB A 19 ? B 22 ? A 20 ? B 21 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2R1J _pdbx_initial_refinement_model.details 'PDB entry 2R1J' #