data_3KHT # _entry.id 3KHT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3KHT RCSB RCSB056010 WWPDB D_1000056010 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGXRC-11023k _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3KHT _pdbx_database_status.recvd_initial_deposition_date 2009-10-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bagaria, A.' 1 ? 'Burley, S.K.' 2 0000-0002-2487-9713 'Swaminathan, S.' 3 ? 'New York SGX Research Center for Structural Genomics (NYSGXRC)' 4 ? # _citation.id primary _citation.title 'Crystal structure of response regulator from Hahella chejuensis' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bagaria, A.' 1 ? primary 'Burley, S.K.' 2 0000-0002-2487-9713 primary 'Swaminathan, S.' 3 ? # _cell.entry_id 3KHT _cell.length_a 57.090 _cell.length_b 57.090 _cell.length_c 200.456 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3KHT _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Response regulator' 16386.117 1 ? ? 'sequence database residues 13-145' ? 2 water nat water 18.015 74 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SLRSKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEV(MSE)SA VRKPGANQHTPIVILTDNVSDDRAKQC(MSE)AAGASSVVDKSSNNVTDFYGRIYAIFSYWLTVNHCQEGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLRSKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQ HTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFSYWLTVNHCQEGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGXRC-11023k # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 LEU n 1 4 ARG n 1 5 SER n 1 6 LYS n 1 7 ARG n 1 8 VAL n 1 9 LEU n 1 10 VAL n 1 11 VAL n 1 12 GLU n 1 13 ASP n 1 14 ASN n 1 15 PRO n 1 16 ASP n 1 17 ASP n 1 18 ILE n 1 19 ALA n 1 20 LEU n 1 21 ILE n 1 22 ARG n 1 23 ARG n 1 24 VAL n 1 25 LEU n 1 26 ASP n 1 27 ARG n 1 28 LYS n 1 29 ASP n 1 30 ILE n 1 31 HIS n 1 32 CYS n 1 33 GLN n 1 34 LEU n 1 35 GLU n 1 36 PHE n 1 37 VAL n 1 38 ASP n 1 39 ASN n 1 40 GLY n 1 41 ALA n 1 42 LYS n 1 43 ALA n 1 44 LEU n 1 45 TYR n 1 46 GLN n 1 47 VAL n 1 48 GLN n 1 49 GLN n 1 50 ALA n 1 51 LYS n 1 52 TYR n 1 53 ASP n 1 54 LEU n 1 55 ILE n 1 56 ILE n 1 57 LEU n 1 58 ASP n 1 59 ILE n 1 60 GLY n 1 61 LEU n 1 62 PRO n 1 63 ILE n 1 64 ALA n 1 65 ASN n 1 66 GLY n 1 67 PHE n 1 68 GLU n 1 69 VAL n 1 70 MSE n 1 71 SER n 1 72 ALA n 1 73 VAL n 1 74 ARG n 1 75 LYS n 1 76 PRO n 1 77 GLY n 1 78 ALA n 1 79 ASN n 1 80 GLN n 1 81 HIS n 1 82 THR n 1 83 PRO n 1 84 ILE n 1 85 VAL n 1 86 ILE n 1 87 LEU n 1 88 THR n 1 89 ASP n 1 90 ASN n 1 91 VAL n 1 92 SER n 1 93 ASP n 1 94 ASP n 1 95 ARG n 1 96 ALA n 1 97 LYS n 1 98 GLN n 1 99 CYS n 1 100 MSE n 1 101 ALA n 1 102 ALA n 1 103 GLY n 1 104 ALA n 1 105 SER n 1 106 SER n 1 107 VAL n 1 108 VAL n 1 109 ASP n 1 110 LYS n 1 111 SER n 1 112 SER n 1 113 ASN n 1 114 ASN n 1 115 VAL n 1 116 THR n 1 117 ASP n 1 118 PHE n 1 119 TYR n 1 120 GLY n 1 121 ARG n 1 122 ILE n 1 123 TYR n 1 124 ALA n 1 125 ILE n 1 126 PHE n 1 127 SER n 1 128 TYR n 1 129 TRP n 1 130 LEU n 1 131 THR n 1 132 VAL n 1 133 ASN n 1 134 HIS n 1 135 CYS n 1 136 GLN n 1 137 GLU n 1 138 GLY n 1 139 HIS n 1 140 HIS n 1 141 HIS n 1 142 HIS n 1 143 HIS n 1 144 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene HCH_02875 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'KCTC 2396' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Hahella chejuensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 349521 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pSGX3(BC)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2SI73_HAHCH _struct_ref.pdbx_db_accession Q2SI73 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RSKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTP IVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFSYWLTVNHCQ ; _struct_ref.pdbx_align_begin 13 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3KHT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 136 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2SI73 _struct_ref_seq.db_align_beg 13 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 145 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 13 _struct_ref_seq.pdbx_auth_seq_align_end 145 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3KHT MSE A 1 ? UNP Q2SI73 ? ? 'expression tag' 10 1 1 3KHT SER A 2 ? UNP Q2SI73 ? ? 'expression tag' 11 2 1 3KHT LEU A 3 ? UNP Q2SI73 ? ? 'expression tag' 12 3 1 3KHT GLU A 137 ? UNP Q2SI73 ? ? 'expression tag' 146 4 1 3KHT GLY A 138 ? UNP Q2SI73 ? ? 'expression tag' 147 5 1 3KHT HIS A 139 ? UNP Q2SI73 ? ? 'expression tag' 148 6 1 3KHT HIS A 140 ? UNP Q2SI73 ? ? 'expression tag' 149 7 1 3KHT HIS A 141 ? UNP Q2SI73 ? ? 'expression tag' 150 8 1 3KHT HIS A 142 ? UNP Q2SI73 ? ? 'expression tag' 151 9 1 3KHT HIS A 143 ? UNP Q2SI73 ? ? 'expression tag' 152 10 1 3KHT HIS A 144 ? UNP Q2SI73 ? ? 'expression tag' 153 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3KHT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.88 _exptl_crystal.density_percent_sol 57.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M NaCl, 0.1M HEPES pH 7.5, 1.6M Ammonium Sulphate, VAPOR DIFFUSION, SITTING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-10-22 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength 0.979 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3KHT _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 39.750 _reflns.d_resolution_high 2.100 _reflns.number_obs 11490 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.07400 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.3000 _reflns.B_iso_Wilson_estimate 41.90 _reflns.pdbx_redundancy 40.000 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.40300 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 11.500 _reflns_shell.pdbx_redundancy 41.30 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3KHT _refine.ls_number_reflns_obs 11490 _refine.ls_number_reflns_all 12140 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.75 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.227 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.224 _refine.ls_R_factor_R_free 0.288 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 578 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.909 _refine.B_iso_mean 37.22 _refine.aniso_B[1][1] 0.00000 _refine.aniso_B[2][2] 0.00000 _refine.aniso_B[3][3] 0.00000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.191 _refine.pdbx_overall_ESU_R_Free 0.192 _refine.overall_SU_ML 0.143 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.387 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1034 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 74 _refine_hist.number_atoms_total 1108 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 39.75 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.025 0.022 ? 1053 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.965 1.944 ? 1429 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.040 5.000 ? 131 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.828 24.423 ? 52 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.198 15.000 ? 179 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.914 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.139 0.200 ? 165 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 800 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.271 0.200 ? 521 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.317 0.200 ? 741 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.234 0.200 ? 72 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.390 0.200 ? 45 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.634 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.583 1.500 ? 676 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.549 2.000 ? 1064 'X-RAY DIFFRACTION' ? r_scbond_it 3.658 3.000 ? 425 'X-RAY DIFFRACTION' ? r_scangle_it 5.509 4.500 ? 365 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.15 _refine_ls_shell.number_reflns_R_work 793 _refine_ls_shell.R_factor_R_work 0.2770 _refine_ls_shell.percent_reflns_obs 96.50 _refine_ls_shell.R_factor_R_free 0.4230 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3KHT _struct.title 'Crystal structure of response regulator from Hahella chejuensis' _struct.pdbx_descriptor 'Response regulator' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3KHT _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;Response regulator, PSI-II, 11023k, Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, DNA-binding, SIGNALING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 14 ? LYS A 28 ? ASN A 23 LYS A 37 1 ? 15 HELX_P HELX_P2 2 ASN A 39 ? GLN A 48 ? ASN A 48 GLN A 57 1 ? 10 HELX_P HELX_P3 3 LEU A 61 ? ALA A 64 ? LEU A 70 ALA A 73 5 ? 4 HELX_P HELX_P4 4 ASN A 65 ? LYS A 75 ? ASN A 74 LYS A 84 1 ? 11 HELX_P HELX_P5 5 SER A 92 ? ALA A 102 ? SER A 101 ALA A 111 1 ? 11 HELX_P HELX_P6 6 ASN A 114 ? VAL A 132 ? ASN A 123 VAL A 141 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A VAL 69 C ? ? ? 1_555 A MSE 70 N ? ? A VAL 78 A MSE 79 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale2 covale both ? A MSE 70 C ? ? ? 1_555 A SER 71 N ? ? A MSE 79 A SER 80 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale3 covale both ? A CYS 99 C ? ? ? 1_555 A MSE 100 N ? ? A CYS 108 A MSE 109 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale4 covale both ? A MSE 100 C ? ? ? 1_555 A ALA 101 N ? ? A MSE 109 A ALA 110 1_555 ? ? ? ? ? ? ? 1.337 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 32 ? VAL A 37 ? CYS A 41 VAL A 46 A 2 LYS A 6 ? VAL A 11 ? LYS A 15 VAL A 20 A 3 LEU A 54 ? LEU A 57 ? LEU A 63 LEU A 66 A 4 ILE A 84 ? THR A 88 ? ILE A 93 THR A 97 A 5 SER A 106 ? ASP A 109 ? SER A 115 ASP A 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 33 ? O GLN A 42 N LYS A 6 ? N LYS A 15 A 2 3 N VAL A 11 ? N VAL A 20 O ILE A 56 ? O ILE A 65 A 3 4 N ILE A 55 ? N ILE A 64 O VAL A 85 ? O VAL A 94 A 4 5 N ILE A 86 ? N ILE A 95 O VAL A 108 ? O VAL A 117 # _database_PDB_matrix.entry_id 3KHT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3KHT _atom_sites.fract_transf_matrix[1][1] 0.017516 _atom_sites.fract_transf_matrix[1][2] 0.010113 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020226 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004989 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 10 ? ? ? A . n A 1 2 SER 2 11 ? ? ? A . n A 1 3 LEU 3 12 ? ? ? A . n A 1 4 ARG 4 13 ? ? ? A . n A 1 5 SER 5 14 14 SER SER A . n A 1 6 LYS 6 15 15 LYS LYS A . n A 1 7 ARG 7 16 16 ARG ARG A . n A 1 8 VAL 8 17 17 VAL VAL A . n A 1 9 LEU 9 18 18 LEU LEU A . n A 1 10 VAL 10 19 19 VAL VAL A . n A 1 11 VAL 11 20 20 VAL VAL A . n A 1 12 GLU 12 21 21 GLU GLU A . n A 1 13 ASP 13 22 22 ASP ASP A . n A 1 14 ASN 14 23 23 ASN ASN A . n A 1 15 PRO 15 24 24 PRO PRO A . n A 1 16 ASP 16 25 25 ASP ASP A . n A 1 17 ASP 17 26 26 ASP ASP A . n A 1 18 ILE 18 27 27 ILE ILE A . n A 1 19 ALA 19 28 28 ALA ALA A . n A 1 20 LEU 20 29 29 LEU LEU A . n A 1 21 ILE 21 30 30 ILE ILE A . n A 1 22 ARG 22 31 31 ARG ARG A . n A 1 23 ARG 23 32 32 ARG ARG A . n A 1 24 VAL 24 33 33 VAL VAL A . n A 1 25 LEU 25 34 34 LEU LEU A . n A 1 26 ASP 26 35 35 ASP ASP A . n A 1 27 ARG 27 36 36 ARG ARG A . n A 1 28 LYS 28 37 37 LYS LYS A . n A 1 29 ASP 29 38 38 ASP ASP A . n A 1 30 ILE 30 39 39 ILE ILE A . n A 1 31 HIS 31 40 40 HIS HIS A . n A 1 32 CYS 32 41 41 CYS CYS A . n A 1 33 GLN 33 42 42 GLN GLN A . n A 1 34 LEU 34 43 43 LEU LEU A . n A 1 35 GLU 35 44 44 GLU GLU A . n A 1 36 PHE 36 45 45 PHE PHE A . n A 1 37 VAL 37 46 46 VAL VAL A . n A 1 38 ASP 38 47 47 ASP ASP A . n A 1 39 ASN 39 48 48 ASN ASN A . n A 1 40 GLY 40 49 49 GLY GLY A . n A 1 41 ALA 41 50 50 ALA ALA A . n A 1 42 LYS 42 51 51 LYS LYS A . n A 1 43 ALA 43 52 52 ALA ALA A . n A 1 44 LEU 44 53 53 LEU LEU A . n A 1 45 TYR 45 54 54 TYR TYR A . n A 1 46 GLN 46 55 55 GLN GLN A . n A 1 47 VAL 47 56 56 VAL VAL A . n A 1 48 GLN 48 57 57 GLN GLN A . n A 1 49 GLN 49 58 58 GLN GLN A . n A 1 50 ALA 50 59 59 ALA ALA A . n A 1 51 LYS 51 60 60 LYS LYS A . n A 1 52 TYR 52 61 61 TYR TYR A . n A 1 53 ASP 53 62 62 ASP ASP A . n A 1 54 LEU 54 63 63 LEU LEU A . n A 1 55 ILE 55 64 64 ILE ILE A . n A 1 56 ILE 56 65 65 ILE ILE A . n A 1 57 LEU 57 66 66 LEU LEU A . n A 1 58 ASP 58 67 67 ASP ASP A . n A 1 59 ILE 59 68 68 ILE ILE A . n A 1 60 GLY 60 69 69 GLY GLY A . n A 1 61 LEU 61 70 70 LEU LEU A . n A 1 62 PRO 62 71 71 PRO PRO A . n A 1 63 ILE 63 72 72 ILE ILE A . n A 1 64 ALA 64 73 73 ALA ALA A . n A 1 65 ASN 65 74 74 ASN ASN A . n A 1 66 GLY 66 75 75 GLY GLY A . n A 1 67 PHE 67 76 76 PHE PHE A . n A 1 68 GLU 68 77 77 GLU GLU A . n A 1 69 VAL 69 78 78 VAL VAL A . n A 1 70 MSE 70 79 79 MSE MSE A . n A 1 71 SER 71 80 80 SER SER A . n A 1 72 ALA 72 81 81 ALA ALA A . n A 1 73 VAL 73 82 82 VAL VAL A . n A 1 74 ARG 74 83 83 ARG ARG A . n A 1 75 LYS 75 84 84 LYS LYS A . n A 1 76 PRO 76 85 85 PRO PRO A . n A 1 77 GLY 77 86 86 GLY GLY A . n A 1 78 ALA 78 87 87 ALA ALA A . n A 1 79 ASN 79 88 88 ASN ASN A . n A 1 80 GLN 80 89 89 GLN GLN A . n A 1 81 HIS 81 90 90 HIS HIS A . n A 1 82 THR 82 91 91 THR THR A . n A 1 83 PRO 83 92 92 PRO PRO A . n A 1 84 ILE 84 93 93 ILE ILE A . n A 1 85 VAL 85 94 94 VAL VAL A . n A 1 86 ILE 86 95 95 ILE ILE A . n A 1 87 LEU 87 96 96 LEU LEU A . n A 1 88 THR 88 97 97 THR THR A . n A 1 89 ASP 89 98 98 ASP ASP A . n A 1 90 ASN 90 99 99 ASN ASN A . n A 1 91 VAL 91 100 100 VAL VAL A . n A 1 92 SER 92 101 101 SER SER A . n A 1 93 ASP 93 102 102 ASP ASP A . n A 1 94 ASP 94 103 103 ASP ASP A . n A 1 95 ARG 95 104 104 ARG ARG A . n A 1 96 ALA 96 105 105 ALA ALA A . n A 1 97 LYS 97 106 106 LYS LYS A . n A 1 98 GLN 98 107 107 GLN GLN A . n A 1 99 CYS 99 108 108 CYS CYS A . n A 1 100 MSE 100 109 109 MSE MSE A . n A 1 101 ALA 101 110 110 ALA ALA A . n A 1 102 ALA 102 111 111 ALA ALA A . n A 1 103 GLY 103 112 112 GLY GLY A . n A 1 104 ALA 104 113 113 ALA ALA A . n A 1 105 SER 105 114 114 SER SER A . n A 1 106 SER 106 115 115 SER SER A . n A 1 107 VAL 107 116 116 VAL VAL A . n A 1 108 VAL 108 117 117 VAL VAL A . n A 1 109 ASP 109 118 118 ASP ASP A . n A 1 110 LYS 110 119 119 LYS LYS A . n A 1 111 SER 111 120 120 SER SER A . n A 1 112 SER 112 121 121 SER SER A . n A 1 113 ASN 113 122 122 ASN ASN A . n A 1 114 ASN 114 123 123 ASN ASN A . n A 1 115 VAL 115 124 124 VAL VAL A . n A 1 116 THR 116 125 125 THR THR A . n A 1 117 ASP 117 126 126 ASP ASP A . n A 1 118 PHE 118 127 127 PHE PHE A . n A 1 119 TYR 119 128 128 TYR TYR A . n A 1 120 GLY 120 129 129 GLY GLY A . n A 1 121 ARG 121 130 130 ARG ARG A . n A 1 122 ILE 122 131 131 ILE ILE A . n A 1 123 TYR 123 132 132 TYR TYR A . n A 1 124 ALA 124 133 133 ALA ALA A . n A 1 125 ILE 125 134 134 ILE ILE A . n A 1 126 PHE 126 135 135 PHE PHE A . n A 1 127 SER 127 136 136 SER SER A . n A 1 128 TYR 128 137 137 TYR TYR A . n A 1 129 TRP 129 138 138 TRP TRP A . n A 1 130 LEU 130 139 139 LEU LEU A . n A 1 131 THR 131 140 140 THR THR A . n A 1 132 VAL 132 141 141 VAL VAL A . n A 1 133 ASN 133 142 142 ASN ASN A . n A 1 134 HIS 134 143 143 HIS HIS A . n A 1 135 CYS 135 144 144 CYS CYS A . n A 1 136 GLN 136 145 145 GLN GLN A . n A 1 137 GLU 137 146 ? ? ? A . n A 1 138 GLY 138 147 ? ? ? A . n A 1 139 HIS 139 148 ? ? ? A . n A 1 140 HIS 140 149 ? ? ? A . n A 1 141 HIS 141 150 ? ? ? A . n A 1 142 HIS 142 151 ? ? ? A . n A 1 143 HIS 143 152 ? ? ? A . n A 1 144 HIS 144 153 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York SGX Research Center for Structural Genomics' _pdbx_SG_project.initial_of_center NYSGXRC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 4 4 HOH HOH A . B 2 HOH 4 5 5 HOH HOH A . B 2 HOH 5 6 6 HOH HOH A . B 2 HOH 6 7 7 HOH HOH A . B 2 HOH 7 8 8 HOH HOH A . B 2 HOH 8 9 9 HOH HOH A . B 2 HOH 9 154 154 HOH HOH A . B 2 HOH 10 155 155 HOH HOH A . B 2 HOH 11 156 156 HOH HOH A . B 2 HOH 12 157 157 HOH HOH A . B 2 HOH 13 159 159 HOH HOH A . B 2 HOH 14 160 160 HOH HOH A . B 2 HOH 15 161 161 HOH HOH A . B 2 HOH 16 162 162 HOH HOH A . B 2 HOH 17 163 163 HOH HOH A . B 2 HOH 18 164 164 HOH HOH A . B 2 HOH 19 165 165 HOH HOH A . B 2 HOH 20 166 166 HOH HOH A . B 2 HOH 21 167 167 HOH HOH A . B 2 HOH 22 168 168 HOH HOH A . B 2 HOH 23 169 169 HOH HOH A . B 2 HOH 24 170 170 HOH HOH A . B 2 HOH 25 171 171 HOH HOH A . B 2 HOH 26 172 172 HOH HOH A . B 2 HOH 27 173 173 HOH HOH A . B 2 HOH 28 174 174 HOH HOH A . B 2 HOH 29 175 175 HOH HOH A . B 2 HOH 30 176 176 HOH HOH A . B 2 HOH 31 177 177 HOH HOH A . B 2 HOH 32 178 178 HOH HOH A . B 2 HOH 33 179 179 HOH HOH A . B 2 HOH 34 180 180 HOH HOH A . B 2 HOH 35 181 181 HOH HOH A . B 2 HOH 36 182 182 HOH HOH A . B 2 HOH 37 183 183 HOH HOH A . B 2 HOH 38 184 184 HOH HOH A . B 2 HOH 39 185 185 HOH HOH A . B 2 HOH 40 186 186 HOH HOH A . B 2 HOH 41 187 187 HOH HOH A . B 2 HOH 42 188 188 HOH HOH A . B 2 HOH 43 190 190 HOH HOH A . B 2 HOH 44 191 191 HOH HOH A . B 2 HOH 45 192 192 HOH HOH A . B 2 HOH 46 193 193 HOH HOH A . B 2 HOH 47 194 194 HOH HOH A . B 2 HOH 48 195 195 HOH HOH A . B 2 HOH 49 196 196 HOH HOH A . B 2 HOH 50 197 197 HOH HOH A . B 2 HOH 51 198 198 HOH HOH A . B 2 HOH 52 199 199 HOH HOH A . B 2 HOH 53 200 200 HOH HOH A . B 2 HOH 54 201 201 HOH HOH A . B 2 HOH 55 202 202 HOH HOH A . B 2 HOH 56 203 203 HOH HOH A . B 2 HOH 57 204 204 HOH HOH A . B 2 HOH 58 205 205 HOH HOH A . B 2 HOH 59 206 206 HOH HOH A . B 2 HOH 60 207 207 HOH HOH A . B 2 HOH 61 208 208 HOH HOH A . B 2 HOH 62 209 209 HOH HOH A . B 2 HOH 63 210 210 HOH HOH A . B 2 HOH 64 211 211 HOH HOH A . B 2 HOH 65 212 212 HOH HOH A . B 2 HOH 66 213 213 HOH HOH A . B 2 HOH 67 214 214 HOH HOH A . B 2 HOH 68 215 215 HOH HOH A . B 2 HOH 69 216 216 HOH HOH A . B 2 HOH 70 217 217 HOH HOH A . B 2 HOH 71 218 218 HOH HOH A . B 2 HOH 72 219 219 HOH HOH A . B 2 HOH 73 220 220 HOH HOH A . B 2 HOH 74 221 221 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 70 A MSE 79 ? MET SELENOMETHIONINE 2 A MSE 100 A MSE 109 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1,2 A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1840 ? 2 MORE -10 ? 2 'SSA (A^2)' 12200 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_775 -y+2,-x+2,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 57.0900000000 -0.8660254038 -0.5000000000 0.0000000000 98.8827806041 0.0000000000 0.0000000000 -1.0000000000 33.4093333333 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 208 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-02-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 3 'Structure model' citation_author 3 3 'Structure model' struct_conn 4 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.identifier_ORCID' 2 3 'Structure model' '_citation_author.identifier_ORCID' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 SHARP phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A GLU 77 ? ? CD A GLU 77 ? ? 1.607 1.515 0.092 0.015 N 2 1 CB A SER 136 ? ? OG A SER 136 ? ? 1.331 1.418 -0.087 0.013 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 10 ? A MSE 1 2 1 Y 1 A SER 11 ? A SER 2 3 1 Y 1 A LEU 12 ? A LEU 3 4 1 Y 1 A ARG 13 ? A ARG 4 5 1 Y 1 A GLU 146 ? A GLU 137 6 1 Y 1 A GLY 147 ? A GLY 138 7 1 Y 1 A HIS 148 ? A HIS 139 8 1 Y 1 A HIS 149 ? A HIS 140 9 1 Y 1 A HIS 150 ? A HIS 141 10 1 Y 1 A HIS 151 ? A HIS 142 11 1 Y 1 A HIS 152 ? A HIS 143 12 1 Y 1 A HIS 153 ? A HIS 144 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #