data_3LR5 # _entry.id 3LR5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LR5 pdb_00003lr5 10.2210/pdb3lr5/pdb RCSB RCSB057626 ? ? WWPDB D_1000057626 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3LR5 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-02-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3LR0 'iodide phased at low pH' unspecified PDB 3LR3 'native at low pH' unspecified PDB 3LR4 'barium phased at low pH' unspecified TargetDB BupsA.00863.i 'full length risS sensor protein' unspecified # _audit_author.name 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural basis for pH sensing by the periplsamic domain of the risS histidine kinase from Burkholderia pseudomallei' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Edwards, T.E.' 1 ? primary 'Abendroth, J.' 2 ? primary 'Staker, B.L.' 3 ? primary 'Phan, I.' 4 ? primary 'Myler, P.' 5 ? primary 'Stacy, R.' 6 ? primary 'Stewart, L.' 7 ? primary 'Miller, S.I.' 8 ? primary 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sensor protein' 16532.572 2 2.7.13.3 ? 'UNP residues 37 to 158' ? 2 non-polymer syn 'IODIDE ION' 126.904 5 ? ? ? ? 3 water nat water 18.015 163 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAHHHHHHMGTLEAQTQGPGSMSFRVIEREPRAQRVALQLVAIVKLTRTALLYSDPDLRRALLQDLESNEGVRVYPREKT DKFKLQPDESVNRLIEHDIRSRLGDDTVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDTVTG ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHMGTLEAQTQGPGSMSFRVIEREPRAQRVALQLVAIVKLTRTALLYSDPDLRRALLQDLESNEGVRVYPREKT DKFKLQPDESVNRLIEHDIRSRLGDDTVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDTVTG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier BupsA.00863.i # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 MET n 1 10 GLY n 1 11 THR n 1 12 LEU n 1 13 GLU n 1 14 ALA n 1 15 GLN n 1 16 THR n 1 17 GLN n 1 18 GLY n 1 19 PRO n 1 20 GLY n 1 21 SER n 1 22 MET n 1 23 SER n 1 24 PHE n 1 25 ARG n 1 26 VAL n 1 27 ILE n 1 28 GLU n 1 29 ARG n 1 30 GLU n 1 31 PRO n 1 32 ARG n 1 33 ALA n 1 34 GLN n 1 35 ARG n 1 36 VAL n 1 37 ALA n 1 38 LEU n 1 39 GLN n 1 40 LEU n 1 41 VAL n 1 42 ALA n 1 43 ILE n 1 44 VAL n 1 45 LYS n 1 46 LEU n 1 47 THR n 1 48 ARG n 1 49 THR n 1 50 ALA n 1 51 LEU n 1 52 LEU n 1 53 TYR n 1 54 SER n 1 55 ASP n 1 56 PRO n 1 57 ASP n 1 58 LEU n 1 59 ARG n 1 60 ARG n 1 61 ALA n 1 62 LEU n 1 63 LEU n 1 64 GLN n 1 65 ASP n 1 66 LEU n 1 67 GLU n 1 68 SER n 1 69 ASN n 1 70 GLU n 1 71 GLY n 1 72 VAL n 1 73 ARG n 1 74 VAL n 1 75 TYR n 1 76 PRO n 1 77 ARG n 1 78 GLU n 1 79 LYS n 1 80 THR n 1 81 ASP n 1 82 LYS n 1 83 PHE n 1 84 LYS n 1 85 LEU n 1 86 GLN n 1 87 PRO n 1 88 ASP n 1 89 GLU n 1 90 SER n 1 91 VAL n 1 92 ASN n 1 93 ARG n 1 94 LEU n 1 95 ILE n 1 96 GLU n 1 97 HIS n 1 98 ASP n 1 99 ILE n 1 100 ARG n 1 101 SER n 1 102 ARG n 1 103 LEU n 1 104 GLY n 1 105 ASP n 1 106 ASP n 1 107 THR n 1 108 VAL n 1 109 ILE n 1 110 ALA n 1 111 GLN n 1 112 SER n 1 113 VAL n 1 114 ASN n 1 115 ASP n 1 116 ILE n 1 117 PRO n 1 118 GLY n 1 119 VAL n 1 120 TRP n 1 121 ILE n 1 122 SER n 1 123 PHE n 1 124 LYS n 1 125 ILE n 1 126 ASP n 1 127 ASP n 1 128 ASP n 1 129 ASP n 1 130 TYR n 1 131 TRP n 1 132 VAL n 1 133 ALA n 1 134 LEU n 1 135 ASP n 1 136 ARG n 1 137 ASP n 1 138 GLN n 1 139 LEU n 1 140 ASP n 1 141 THR n 1 142 VAL n 1 143 THR n 1 144 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Pseudomonas pseudomallei' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BPSL2095 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 1710b _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Burkholderia pseudomallei' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 28450 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type AVA0421 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 8 ? ? ? A . n A 1 2 ALA 2 9 ? ? ? A . n A 1 3 HIS 3 10 ? ? ? A . n A 1 4 HIS 4 11 ? ? ? A . n A 1 5 HIS 5 12 ? ? ? A . n A 1 6 HIS 6 13 ? ? ? A . n A 1 7 HIS 7 14 ? ? ? A . n A 1 8 HIS 8 15 ? ? ? A . n A 1 9 MET 9 16 ? ? ? A . n A 1 10 GLY 10 17 ? ? ? A . n A 1 11 THR 11 18 ? ? ? A . n A 1 12 LEU 12 19 ? ? ? A . n A 1 13 GLU 13 20 ? ? ? A . n A 1 14 ALA 14 21 ? ? ? A . n A 1 15 GLN 15 22 ? ? ? A . n A 1 16 THR 16 23 ? ? ? A . n A 1 17 GLN 17 24 ? ? ? A . n A 1 18 GLY 18 25 ? ? ? A . n A 1 19 PRO 19 26 ? ? ? A . n A 1 20 GLY 20 27 ? ? ? A . n A 1 21 SER 21 28 ? ? ? A . n A 1 22 MET 22 29 29 MET MET A . n A 1 23 SER 23 30 30 SER SER A . n A 1 24 PHE 24 31 31 PHE PHE A . n A 1 25 ARG 25 32 32 ARG ARG A . n A 1 26 VAL 26 33 33 VAL VAL A . n A 1 27 ILE 27 34 34 ILE ILE A . n A 1 28 GLU 28 35 35 GLU GLU A . n A 1 29 ARG 29 36 36 ARG ARG A . n A 1 30 GLU 30 37 37 GLU GLU A . n A 1 31 PRO 31 38 38 PRO PRO A . n A 1 32 ARG 32 39 39 ARG ARG A . n A 1 33 ALA 33 40 40 ALA ALA A . n A 1 34 GLN 34 41 41 GLN GLN A . n A 1 35 ARG 35 42 42 ARG ARG A . n A 1 36 VAL 36 43 43 VAL VAL A . n A 1 37 ALA 37 44 44 ALA ALA A . n A 1 38 LEU 38 45 45 LEU LEU A . n A 1 39 GLN 39 46 46 GLN GLN A . n A 1 40 LEU 40 47 47 LEU LEU A . n A 1 41 VAL 41 48 48 VAL VAL A . n A 1 42 ALA 42 49 49 ALA ALA A . n A 1 43 ILE 43 50 50 ILE ILE A . n A 1 44 VAL 44 51 51 VAL VAL A . n A 1 45 LYS 45 52 52 LYS LYS A . n A 1 46 LEU 46 53 53 LEU LEU A . n A 1 47 THR 47 54 54 THR THR A . n A 1 48 ARG 48 55 55 ARG ARG A . n A 1 49 THR 49 56 56 THR THR A . n A 1 50 ALA 50 57 57 ALA ALA A . n A 1 51 LEU 51 58 58 LEU LEU A . n A 1 52 LEU 52 59 59 LEU LEU A . n A 1 53 TYR 53 60 60 TYR TYR A . n A 1 54 SER 54 61 61 SER SER A . n A 1 55 ASP 55 62 62 ASP ASP A . n A 1 56 PRO 56 63 63 PRO PRO A . n A 1 57 ASP 57 64 64 ASP ASP A . n A 1 58 LEU 58 65 65 LEU LEU A . n A 1 59 ARG 59 66 66 ARG ARG A . n A 1 60 ARG 60 67 67 ARG ARG A . n A 1 61 ALA 61 68 68 ALA ALA A . n A 1 62 LEU 62 69 69 LEU LEU A . n A 1 63 LEU 63 70 70 LEU LEU A . n A 1 64 GLN 64 71 71 GLN GLN A . n A 1 65 ASP 65 72 72 ASP ASP A . n A 1 66 LEU 66 73 73 LEU LEU A . n A 1 67 GLU 67 74 74 GLU GLU A . n A 1 68 SER 68 75 75 SER SER A . n A 1 69 ASN 69 76 76 ASN ASN A . n A 1 70 GLU 70 77 77 GLU GLU A . n A 1 71 GLY 71 78 78 GLY GLY A . n A 1 72 VAL 72 79 79 VAL VAL A . n A 1 73 ARG 73 80 80 ARG ARG A . n A 1 74 VAL 74 81 81 VAL VAL A . n A 1 75 TYR 75 82 82 TYR TYR A . n A 1 76 PRO 76 83 83 PRO PRO A . n A 1 77 ARG 77 84 84 ARG ARG A . n A 1 78 GLU 78 85 85 GLU GLU A . n A 1 79 LYS 79 86 86 LYS LYS A . n A 1 80 THR 80 87 87 THR THR A . n A 1 81 ASP 81 88 88 ASP ASP A . n A 1 82 LYS 82 89 89 LYS LYS A . n A 1 83 PHE 83 90 90 PHE PHE A . n A 1 84 LYS 84 91 91 LYS LYS A . n A 1 85 LEU 85 92 92 LEU LEU A . n A 1 86 GLN 86 93 93 GLN GLN A . n A 1 87 PRO 87 94 94 PRO PRO A . n A 1 88 ASP 88 95 95 ASP ASP A . n A 1 89 GLU 89 96 96 GLU GLU A . n A 1 90 SER 90 97 97 SER SER A . n A 1 91 VAL 91 98 98 VAL VAL A . n A 1 92 ASN 92 99 99 ASN ASN A . n A 1 93 ARG 93 100 100 ARG ARG A . n A 1 94 LEU 94 101 101 LEU LEU A . n A 1 95 ILE 95 102 102 ILE ILE A . n A 1 96 GLU 96 103 103 GLU GLU A . n A 1 97 HIS 97 104 104 HIS HIS A . n A 1 98 ASP 98 105 105 ASP ASP A . n A 1 99 ILE 99 106 106 ILE ILE A . n A 1 100 ARG 100 107 107 ARG ARG A . n A 1 101 SER 101 108 108 SER SER A . n A 1 102 ARG 102 109 109 ARG ARG A . n A 1 103 LEU 103 110 110 LEU LEU A . n A 1 104 GLY 104 111 111 GLY GLY A . n A 1 105 ASP 105 112 112 ASP ASP A . n A 1 106 ASP 106 113 113 ASP ASP A . n A 1 107 THR 107 114 114 THR THR A . n A 1 108 VAL 108 115 115 VAL VAL A . n A 1 109 ILE 109 116 116 ILE ILE A . n A 1 110 ALA 110 117 117 ALA ALA A . n A 1 111 GLN 111 118 118 GLN GLN A . n A 1 112 SER 112 119 119 SER SER A . n A 1 113 VAL 113 120 120 VAL VAL A . n A 1 114 ASN 114 121 121 ASN ASN A . n A 1 115 ASP 115 122 122 ASP ASP A . n A 1 116 ILE 116 123 123 ILE ILE A . n A 1 117 PRO 117 124 124 PRO PRO A . n A 1 118 GLY 118 125 125 GLY GLY A . n A 1 119 VAL 119 126 126 VAL VAL A . n A 1 120 TRP 120 127 127 TRP TRP A . n A 1 121 ILE 121 128 128 ILE ILE A . n A 1 122 SER 122 129 129 SER SER A . n A 1 123 PHE 123 130 130 PHE PHE A . n A 1 124 LYS 124 131 131 LYS LYS A . n A 1 125 ILE 125 132 132 ILE ILE A . n A 1 126 ASP 126 133 133 ASP ASP A . n A 1 127 ASP 127 134 134 ASP ASP A . n A 1 128 ASP 128 135 135 ASP ASP A . n A 1 129 ASP 129 136 136 ASP ASP A . n A 1 130 TYR 130 137 137 TYR TYR A . n A 1 131 TRP 131 138 138 TRP TRP A . n A 1 132 VAL 132 139 139 VAL VAL A . n A 1 133 ALA 133 140 140 ALA ALA A . n A 1 134 LEU 134 141 141 LEU LEU A . n A 1 135 ASP 135 142 142 ASP ASP A . n A 1 136 ARG 136 143 143 ARG ARG A . n A 1 137 ASP 137 144 144 ASP ASP A . n A 1 138 GLN 138 145 145 GLN GLN A . n A 1 139 LEU 139 146 146 LEU LEU A . n A 1 140 ASP 140 147 147 ASP ASP A . n A 1 141 THR 141 148 ? ? ? A . n A 1 142 VAL 142 149 ? ? ? A . n A 1 143 THR 143 150 ? ? ? A . n A 1 144 GLY 144 151 ? ? ? A . n B 1 1 MET 1 6 ? ? ? B . n B 1 2 ALA 2 7 7 ALA ALA B . n B 1 3 HIS 3 8 8 HIS HIS B . n B 1 4 HIS 4 9 9 HIS HIS B . n B 1 5 HIS 5 10 10 HIS HIS B . n B 1 6 HIS 6 11 11 HIS HIS B . n B 1 7 HIS 7 12 12 HIS HIS B . n B 1 8 HIS 8 13 13 HIS HIS B . n B 1 9 MET 9 16 ? ? ? B . n B 1 10 GLY 10 17 ? ? ? B . n B 1 11 THR 11 18 ? ? ? B . n B 1 12 LEU 12 19 ? ? ? B . n B 1 13 GLU 13 20 ? ? ? B . n B 1 14 ALA 14 21 ? ? ? B . n B 1 15 GLN 15 22 ? ? ? B . n B 1 16 THR 16 23 ? ? ? B . n B 1 17 GLN 17 24 ? ? ? B . n B 1 18 GLY 18 25 ? ? ? B . n B 1 19 PRO 19 26 ? ? ? B . n B 1 20 GLY 20 27 ? ? ? B . n B 1 21 SER 21 28 ? ? ? B . n B 1 22 MET 22 29 ? ? ? B . n B 1 23 SER 23 30 ? ? ? B . n B 1 24 PHE 24 31 ? ? ? B . n B 1 25 ARG 25 32 ? ? ? B . n B 1 26 VAL 26 33 ? ? ? B . n B 1 27 ILE 27 34 ? ? ? B . n B 1 28 GLU 28 35 ? ? ? B . n B 1 29 ARG 29 36 36 ARG ARG B . n B 1 30 GLU 30 37 37 GLU GLU B . n B 1 31 PRO 31 38 38 PRO PRO B . n B 1 32 ARG 32 39 39 ARG ARG B . n B 1 33 ALA 33 40 40 ALA ALA B . n B 1 34 GLN 34 41 41 GLN GLN B . n B 1 35 ARG 35 42 42 ARG ARG B . n B 1 36 VAL 36 43 43 VAL VAL B . n B 1 37 ALA 37 44 44 ALA ALA B . n B 1 38 LEU 38 45 45 LEU LEU B . n B 1 39 GLN 39 46 46 GLN GLN B . n B 1 40 LEU 40 47 47 LEU LEU B . n B 1 41 VAL 41 48 48 VAL VAL B . n B 1 42 ALA 42 49 49 ALA ALA B . n B 1 43 ILE 43 50 50 ILE ILE B . n B 1 44 VAL 44 51 51 VAL VAL B . n B 1 45 LYS 45 52 52 LYS LYS B . n B 1 46 LEU 46 53 53 LEU LEU B . n B 1 47 THR 47 54 54 THR THR B . n B 1 48 ARG 48 55 55 ARG ARG B . n B 1 49 THR 49 56 56 THR THR B . n B 1 50 ALA 50 57 57 ALA ALA B . n B 1 51 LEU 51 58 58 LEU LEU B . n B 1 52 LEU 52 59 59 LEU LEU B . n B 1 53 TYR 53 60 60 TYR TYR B . n B 1 54 SER 54 61 61 SER SER B . n B 1 55 ASP 55 62 62 ASP ASP B . n B 1 56 PRO 56 63 63 PRO PRO B . n B 1 57 ASP 57 64 64 ASP ASP B . n B 1 58 LEU 58 65 65 LEU LEU B . n B 1 59 ARG 59 66 66 ARG ARG B . n B 1 60 ARG 60 67 67 ARG ARG B . n B 1 61 ALA 61 68 68 ALA ALA B . n B 1 62 LEU 62 69 69 LEU LEU B . n B 1 63 LEU 63 70 70 LEU LEU B . n B 1 64 GLN 64 71 71 GLN GLN B . n B 1 65 ASP 65 72 72 ASP ASP B . n B 1 66 LEU 66 73 73 LEU LEU B . n B 1 67 GLU 67 74 74 GLU GLU B . n B 1 68 SER 68 75 75 SER SER B . n B 1 69 ASN 69 76 76 ASN ASN B . n B 1 70 GLU 70 77 77 GLU GLU B . n B 1 71 GLY 71 78 78 GLY GLY B . n B 1 72 VAL 72 79 79 VAL VAL B . n B 1 73 ARG 73 80 80 ARG ARG B . n B 1 74 VAL 74 81 81 VAL VAL B . n B 1 75 TYR 75 82 82 TYR TYR B . n B 1 76 PRO 76 83 83 PRO PRO B . n B 1 77 ARG 77 84 84 ARG ARG B . n B 1 78 GLU 78 85 85 GLU GLU B . n B 1 79 LYS 79 86 86 LYS LYS B . n B 1 80 THR 80 87 87 THR THR B . n B 1 81 ASP 81 88 88 ASP ASP B . n B 1 82 LYS 82 89 89 LYS LYS B . n B 1 83 PHE 83 90 90 PHE PHE B . n B 1 84 LYS 84 91 91 LYS LYS B . n B 1 85 LEU 85 92 92 LEU LEU B . n B 1 86 GLN 86 93 93 GLN GLN B . n B 1 87 PRO 87 94 94 PRO PRO B . n B 1 88 ASP 88 95 95 ASP ASP B . n B 1 89 GLU 89 96 96 GLU GLU B . n B 1 90 SER 90 97 97 SER SER B . n B 1 91 VAL 91 98 98 VAL VAL B . n B 1 92 ASN 92 99 99 ASN ASN B . n B 1 93 ARG 93 100 100 ARG ARG B . n B 1 94 LEU 94 101 101 LEU LEU B . n B 1 95 ILE 95 102 102 ILE ILE B . n B 1 96 GLU 96 103 103 GLU GLU B . n B 1 97 HIS 97 104 104 HIS HIS B . n B 1 98 ASP 98 105 105 ASP ASP B . n B 1 99 ILE 99 106 106 ILE ILE B . n B 1 100 ARG 100 107 107 ARG ARG B . n B 1 101 SER 101 108 108 SER SER B . n B 1 102 ARG 102 109 109 ARG ARG B . n B 1 103 LEU 103 110 110 LEU LEU B . n B 1 104 GLY 104 111 111 GLY GLY B . n B 1 105 ASP 105 112 112 ASP ASP B . n B 1 106 ASP 106 113 113 ASP ASP B . n B 1 107 THR 107 114 114 THR THR B . n B 1 108 VAL 108 115 115 VAL VAL B . n B 1 109 ILE 109 116 116 ILE ILE B . n B 1 110 ALA 110 117 117 ALA ALA B . n B 1 111 GLN 111 118 118 GLN GLN B . n B 1 112 SER 112 119 119 SER SER B . n B 1 113 VAL 113 120 120 VAL VAL B . n B 1 114 ASN 114 121 121 ASN ASN B . n B 1 115 ASP 115 122 122 ASP ASP B . n B 1 116 ILE 116 123 123 ILE ILE B . n B 1 117 PRO 117 124 124 PRO PRO B . n B 1 118 GLY 118 125 125 GLY GLY B . n B 1 119 VAL 119 126 126 VAL VAL B . n B 1 120 TRP 120 127 127 TRP TRP B . n B 1 121 ILE 121 128 128 ILE ILE B . n B 1 122 SER 122 129 129 SER SER B . n B 1 123 PHE 123 130 130 PHE PHE B . n B 1 124 LYS 124 131 131 LYS LYS B . n B 1 125 ILE 125 132 132 ILE ILE B . n B 1 126 ASP 126 133 133 ASP ASP B . n B 1 127 ASP 127 134 134 ASP ASP B . n B 1 128 ASP 128 135 135 ASP ASP B . n B 1 129 ASP 129 136 136 ASP ASP B . n B 1 130 TYR 130 137 137 TYR TYR B . n B 1 131 TRP 131 138 138 TRP TRP B . n B 1 132 VAL 132 139 139 VAL VAL B . n B 1 133 ALA 133 140 140 ALA ALA B . n B 1 134 LEU 134 141 141 LEU LEU B . n B 1 135 ASP 135 142 142 ASP ASP B . n B 1 136 ARG 136 143 143 ARG ARG B . n B 1 137 ASP 137 144 144 ASP ASP B . n B 1 138 GLN 138 145 145 GLN GLN B . n B 1 139 LEU 139 146 146 LEU LEU B . n B 1 140 ASP 140 147 147 ASP ASP B . n B 1 141 THR 141 148 148 THR THR B . n B 1 142 VAL 142 149 149 VAL VAL B . n B 1 143 THR 143 150 150 THR THR B . n B 1 144 GLY 144 151 151 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD 1 1 1 IOD IOD A . D 2 IOD 1 2 2 IOD IOD A . E 2 IOD 1 4 4 IOD IOD A . F 2 IOD 1 3 3 IOD IOD B . G 2 IOD 1 5 5 IOD IOD B . H 3 HOH 1 7 7 HOH HOH A . H 3 HOH 2 152 4 HOH HOH A . H 3 HOH 3 153 8 HOH HOH A . H 3 HOH 4 154 9 HOH HOH A . H 3 HOH 5 155 11 HOH HOH A . H 3 HOH 6 156 13 HOH HOH A . H 3 HOH 7 157 18 HOH HOH A . H 3 HOH 8 158 19 HOH HOH A . H 3 HOH 9 159 159 HOH HOH A . H 3 HOH 10 160 160 HOH HOH A . H 3 HOH 11 161 161 HOH HOH A . H 3 HOH 12 162 20 HOH HOH A . H 3 HOH 13 163 23 HOH HOH A . H 3 HOH 14 164 24 HOH HOH A . H 3 HOH 15 165 28 HOH HOH A . H 3 HOH 16 166 31 HOH HOH A . H 3 HOH 17 167 33 HOH HOH A . H 3 HOH 18 168 34 HOH HOH A . H 3 HOH 19 169 35 HOH HOH A . H 3 HOH 20 170 36 HOH HOH A . H 3 HOH 21 171 40 HOH HOH A . H 3 HOH 22 172 41 HOH HOH A . H 3 HOH 23 173 42 HOH HOH A . H 3 HOH 24 174 43 HOH HOH A . H 3 HOH 25 175 46 HOH HOH A . H 3 HOH 26 176 47 HOH HOH A . H 3 HOH 27 177 48 HOH HOH A . H 3 HOH 28 178 49 HOH HOH A . H 3 HOH 29 179 53 HOH HOH A . H 3 HOH 30 180 54 HOH HOH A . H 3 HOH 31 181 57 HOH HOH A . H 3 HOH 32 182 59 HOH HOH A . H 3 HOH 33 183 63 HOH HOH A . H 3 HOH 34 184 66 HOH HOH A . H 3 HOH 35 185 67 HOH HOH A . H 3 HOH 36 186 68 HOH HOH A . H 3 HOH 37 187 69 HOH HOH A . H 3 HOH 38 188 70 HOH HOH A . H 3 HOH 39 189 71 HOH HOH A . H 3 HOH 40 190 72 HOH HOH A . H 3 HOH 41 191 73 HOH HOH A . H 3 HOH 42 192 74 HOH HOH A . H 3 HOH 43 193 98 HOH HOH A . H 3 HOH 44 194 99 HOH HOH A . H 3 HOH 45 195 100 HOH HOH A . H 3 HOH 46 196 101 HOH HOH A . H 3 HOH 47 197 104 HOH HOH A . H 3 HOH 48 198 105 HOH HOH A . H 3 HOH 49 199 106 HOH HOH A . H 3 HOH 50 200 107 HOH HOH A . H 3 HOH 51 201 108 HOH HOH A . H 3 HOH 52 202 109 HOH HOH A . H 3 HOH 53 203 110 HOH HOH A . H 3 HOH 54 204 129 HOH HOH A . H 3 HOH 55 205 130 HOH HOH A . H 3 HOH 56 206 131 HOH HOH A . H 3 HOH 57 207 134 HOH HOH A . H 3 HOH 58 208 135 HOH HOH A . H 3 HOH 59 209 136 HOH HOH A . H 3 HOH 60 210 137 HOH HOH A . H 3 HOH 61 211 138 HOH HOH A . H 3 HOH 62 212 139 HOH HOH A . H 3 HOH 63 213 140 HOH HOH A . H 3 HOH 64 214 141 HOH HOH A . H 3 HOH 65 215 142 HOH HOH A . H 3 HOH 66 216 143 HOH HOH A . H 3 HOH 67 217 144 HOH HOH A . I 3 HOH 1 1 1 HOH HOH B . I 3 HOH 2 2 2 HOH HOH B . I 3 HOH 3 14 14 HOH HOH B . I 3 HOH 4 15 15 HOH HOH B . I 3 HOH 5 152 152 HOH HOH B . I 3 HOH 6 153 153 HOH HOH B . I 3 HOH 7 154 154 HOH HOH B . I 3 HOH 8 155 155 HOH HOH B . I 3 HOH 9 156 156 HOH HOH B . I 3 HOH 10 157 157 HOH HOH B . I 3 HOH 11 158 158 HOH HOH B . I 3 HOH 12 159 3 HOH HOH B . I 3 HOH 13 160 5 HOH HOH B . I 3 HOH 14 161 6 HOH HOH B . I 3 HOH 15 162 162 HOH HOH B . I 3 HOH 16 163 163 HOH HOH B . I 3 HOH 17 164 10 HOH HOH B . I 3 HOH 18 165 12 HOH HOH B . I 3 HOH 19 166 16 HOH HOH B . I 3 HOH 20 167 17 HOH HOH B . I 3 HOH 21 168 21 HOH HOH B . I 3 HOH 22 169 22 HOH HOH B . I 3 HOH 23 170 25 HOH HOH B . I 3 HOH 24 171 26 HOH HOH B . I 3 HOH 25 172 27 HOH HOH B . I 3 HOH 26 173 29 HOH HOH B . I 3 HOH 27 174 30 HOH HOH B . I 3 HOH 28 175 32 HOH HOH B . I 3 HOH 29 176 37 HOH HOH B . I 3 HOH 30 177 38 HOH HOH B . I 3 HOH 31 178 39 HOH HOH B . I 3 HOH 32 179 44 HOH HOH B . I 3 HOH 33 180 45 HOH HOH B . I 3 HOH 34 181 50 HOH HOH B . I 3 HOH 35 182 51 HOH HOH B . I 3 HOH 36 183 52 HOH HOH B . I 3 HOH 37 184 55 HOH HOH B . I 3 HOH 38 185 56 HOH HOH B . I 3 HOH 39 186 58 HOH HOH B . I 3 HOH 40 187 60 HOH HOH B . I 3 HOH 41 188 61 HOH HOH B . I 3 HOH 42 189 62 HOH HOH B . I 3 HOH 43 190 64 HOH HOH B . I 3 HOH 44 191 65 HOH HOH B . I 3 HOH 45 192 75 HOH HOH B . I 3 HOH 46 193 76 HOH HOH B . I 3 HOH 47 194 77 HOH HOH B . I 3 HOH 48 195 78 HOH HOH B . I 3 HOH 49 196 79 HOH HOH B . I 3 HOH 50 197 80 HOH HOH B . I 3 HOH 51 198 81 HOH HOH B . I 3 HOH 52 199 82 HOH HOH B . I 3 HOH 53 200 83 HOH HOH B . I 3 HOH 54 201 84 HOH HOH B . I 3 HOH 55 202 85 HOH HOH B . I 3 HOH 56 203 86 HOH HOH B . I 3 HOH 57 204 87 HOH HOH B . I 3 HOH 58 205 88 HOH HOH B . I 3 HOH 59 206 89 HOH HOH B . I 3 HOH 60 207 90 HOH HOH B . I 3 HOH 61 208 91 HOH HOH B . I 3 HOH 62 209 92 HOH HOH B . I 3 HOH 63 210 93 HOH HOH B . I 3 HOH 64 211 94 HOH HOH B . I 3 HOH 65 212 95 HOH HOH B . I 3 HOH 66 213 96 HOH HOH B . I 3 HOH 67 214 97 HOH HOH B . I 3 HOH 68 215 102 HOH HOH B . I 3 HOH 69 216 103 HOH HOH B . I 3 HOH 70 217 111 HOH HOH B . I 3 HOH 71 218 112 HOH HOH B . I 3 HOH 72 219 113 HOH HOH B . I 3 HOH 73 220 114 HOH HOH B . I 3 HOH 74 221 115 HOH HOH B . I 3 HOH 75 222 116 HOH HOH B . I 3 HOH 76 223 117 HOH HOH B . I 3 HOH 77 224 118 HOH HOH B . I 3 HOH 78 225 119 HOH HOH B . I 3 HOH 79 226 120 HOH HOH B . I 3 HOH 80 227 121 HOH HOH B . I 3 HOH 81 228 122 HOH HOH B . I 3 HOH 82 229 123 HOH HOH B . I 3 HOH 83 230 124 HOH HOH B . I 3 HOH 84 231 125 HOH HOH B . I 3 HOH 85 232 126 HOH HOH B . I 3 HOH 86 233 127 HOH HOH B . I 3 HOH 87 234 128 HOH HOH B . I 3 HOH 88 235 132 HOH HOH B . I 3 HOH 89 236 133 HOH HOH B . I 3 HOH 90 237 145 HOH HOH B . I 3 HOH 91 238 146 HOH HOH B . I 3 HOH 92 239 147 HOH HOH B . I 3 HOH 93 240 148 HOH HOH B . I 3 HOH 94 241 149 HOH HOH B . I 3 HOH 95 242 150 HOH HOH B . I 3 HOH 96 243 151 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 29 ? CG ? A MET 22 CG 2 1 Y 1 A MET 29 ? SD ? A MET 22 SD 3 1 Y 1 A MET 29 ? CE ? A MET 22 CE 4 1 Y 1 A ARG 32 ? CG ? A ARG 25 CG 5 1 Y 1 A ARG 32 ? CD ? A ARG 25 CD 6 1 Y 1 A ARG 32 ? NE ? A ARG 25 NE 7 1 Y 1 A ARG 32 ? CZ ? A ARG 25 CZ 8 1 Y 1 A ARG 32 ? NH1 ? A ARG 25 NH1 9 1 Y 1 A ARG 32 ? NH2 ? A ARG 25 NH2 10 1 Y 1 A ARG 67 ? CG ? A ARG 60 CG 11 1 Y 1 A ARG 67 ? CD ? A ARG 60 CD 12 1 Y 1 A ARG 67 ? NE ? A ARG 60 NE 13 1 Y 1 A ARG 67 ? CZ ? A ARG 60 CZ 14 1 Y 1 A ARG 67 ? NH1 ? A ARG 60 NH1 15 1 Y 1 A ARG 67 ? NH2 ? A ARG 60 NH2 16 1 Y 1 A LYS 89 ? CG ? A LYS 82 CG 17 1 Y 1 A LYS 89 ? CD ? A LYS 82 CD 18 1 Y 1 A LYS 89 ? CE ? A LYS 82 CE 19 1 Y 1 A LYS 89 ? NZ ? A LYS 82 NZ 20 1 Y 1 A LYS 91 ? CG ? A LYS 84 CG 21 1 Y 1 A LYS 91 ? CD ? A LYS 84 CD 22 1 Y 1 A LYS 91 ? CE ? A LYS 84 CE 23 1 Y 1 A LYS 91 ? NZ ? A LYS 84 NZ 24 1 Y 1 A GLU 96 ? CG ? A GLU 89 CG 25 1 Y 1 A GLU 96 ? CD ? A GLU 89 CD 26 1 Y 1 A GLU 96 ? OE1 ? A GLU 89 OE1 27 1 Y 1 A GLU 96 ? OE2 ? A GLU 89 OE2 28 1 Y 1 A ARG 100 ? CG ? A ARG 93 CG 29 1 Y 1 A ARG 100 ? CD ? A ARG 93 CD 30 1 Y 1 A ARG 100 ? NE ? A ARG 93 NE 31 1 Y 1 A ARG 100 ? CZ ? A ARG 93 CZ 32 1 Y 1 A ARG 100 ? NH1 ? A ARG 93 NH1 33 1 Y 1 A ARG 100 ? NH2 ? A ARG 93 NH2 34 1 Y 1 A ASP 144 ? CG ? A ASP 137 CG 35 1 Y 1 A ASP 144 ? OD1 ? A ASP 137 OD1 36 1 Y 1 A ASP 144 ? OD2 ? A ASP 137 OD2 37 1 Y 1 B ARG 36 ? CG ? B ARG 29 CG 38 1 Y 1 B ARG 36 ? CD ? B ARG 29 CD 39 1 Y 1 B ARG 36 ? NE ? B ARG 29 NE 40 1 Y 1 B ARG 36 ? CZ ? B ARG 29 CZ 41 1 Y 1 B ARG 36 ? NH1 ? B ARG 29 NH1 42 1 Y 1 B ARG 36 ? NH2 ? B ARG 29 NH2 43 1 Y 1 B LYS 86 ? CG ? B LYS 79 CG 44 1 Y 1 B LYS 86 ? CD ? B LYS 79 CD 45 1 Y 1 B LYS 86 ? CE ? B LYS 79 CE 46 1 Y 1 B LYS 86 ? NZ ? B LYS 79 NZ 47 1 Y 1 B LYS 89 ? CG ? B LYS 82 CG 48 1 Y 1 B LYS 89 ? CD ? B LYS 82 CD 49 1 Y 1 B LYS 89 ? CE ? B LYS 82 CE 50 1 Y 1 B LYS 89 ? NZ ? B LYS 82 NZ 51 1 Y 1 B LYS 131 ? CG ? B LYS 124 CG 52 1 Y 1 B LYS 131 ? CD ? B LYS 124 CD 53 1 Y 1 B LYS 131 ? CE ? B LYS 124 CE 54 1 Y 1 B LYS 131 ? NZ ? B LYS 124 NZ 55 1 Y 1 B ASP 134 ? CG ? B ASP 127 CG 56 1 Y 1 B ASP 134 ? OD1 ? B ASP 127 OD1 57 1 Y 1 B ASP 134 ? OD2 ? B ASP 127 OD2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 42.040 _cell.length_b 76.010 _cell.length_c 88.680 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3LR5 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3LR5 _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3LR5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;0.1 M BisTris Propane pH 6.5, 0.2 M NaI, 25% PEG 3350, crystal tracking ID 203088f3, affinity tag not removed prior to crystallization, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.pdbx_collection_date 2010-01-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3LR5 _reflns.d_resolution_high 2.300 _reflns.number_obs 13048 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_netI_over_sigmaI 15.790 _reflns.percent_possible_obs 98.900 _reflns.B_iso_Wilson_estimate 30.555 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.61 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 6.69 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.36 _reflns_shell.number_measured_obs 5916 _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs 947 _reflns_shell.Rmerge_I_obs 0.410 _reflns_shell.meanI_over_sigI_obs 4.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 6.25 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 949 _reflns_shell.percent_possible_all 99.80 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3LR5 _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 19.61 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.950 _refine.ls_number_reflns_obs 13048 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.206 _refine.ls_R_factor_R_work 0.203 _refine.ls_wR_factor_R_work 0.184 _refine.ls_R_factor_R_free 0.252 _refine.ls_wR_factor_R_free 0.226 _refine.ls_percent_reflns_R_free 4.900 _refine.ls_number_reflns_R_free 640 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 22.722 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.890 _refine.aniso_B[2][2] -1.640 _refine.aniso_B[3][3] 0.750 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.923 _refine.correlation_coeff_Fo_to_Fc_free 0.897 _refine.overall_SU_R_Cruickshank_DPI 0.352 _refine.overall_SU_R_free 0.245 _refine.pdbx_overall_ESU_R 0.352 _refine.pdbx_overall_ESU_R_Free 0.245 _refine.overall_SU_ML 0.156 _refine.overall_SU_B 12.228 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.830 _refine.B_iso_max 53.31 _refine.B_iso_min 6.95 _refine.occupancy_max 1.00 _refine.occupancy_min 0.27 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1928 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 2096 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 19.61 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1996 0.014 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2727 1.504 1.956 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 249 6.719 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 107 32.136 23.551 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 331 16.197 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23 22.839 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 316 0.100 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1550 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1226 0.775 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1988 1.452 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 770 2.156 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 734 3.578 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.790 _refine_ls_shell.number_reflns_R_work 898 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.198 _refine_ls_shell.R_factor_R_free 0.230 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 47 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 945 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LR5 _struct.title 'Periplasmic domain of the risS sensor protein from Burkholderia pseudomallei, iodide phased at neutral pH' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LR5 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;NIAID, SSGCID, Seattle Structural Genomics Center for Infectious Disease, Burkholderia, melioidosis, pH, sensor protein, histidine kinase, iodide phased, ATP-binding, Kinase, Membrane, Nucleotide-binding, Phosphoprotein, Transferase, Transmembrane, Two-component regulatory system ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q63T74_BURPS _struct_ref.pdbx_db_accession Q63T74 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SFRVIEREPRAQRVALQLVAIVKLTRTALLYSDPDLRRALLQDLESNEGVRVYPREKTDKFKLQPDESVNRLIEHDIRSR LGDDTVIAQSVNDIPGVWISFKIDDDDYWVALDRDQLDTVTG ; _struct_ref.pdbx_align_begin 37 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LR5 A 23 ? 144 ? Q63T74 37 ? 158 ? 30 151 2 1 3LR5 B 23 ? 144 ? Q63T74 37 ? 158 ? 30 151 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LR5 MET A 1 ? UNP Q63T74 ? ? 'expression tag' 8 1 1 3LR5 ALA A 2 ? UNP Q63T74 ? ? 'expression tag' 9 2 1 3LR5 HIS A 3 ? UNP Q63T74 ? ? 'expression tag' 10 3 1 3LR5 HIS A 4 ? UNP Q63T74 ? ? 'expression tag' 11 4 1 3LR5 HIS A 5 ? UNP Q63T74 ? ? 'expression tag' 12 5 1 3LR5 HIS A 6 ? UNP Q63T74 ? ? 'expression tag' 13 6 1 3LR5 HIS A 7 ? UNP Q63T74 ? ? 'expression tag' 14 7 1 3LR5 HIS A 8 ? UNP Q63T74 ? ? 'expression tag' 15 8 1 3LR5 MET A 9 ? UNP Q63T74 ? ? 'expression tag' 16 9 1 3LR5 GLY A 10 ? UNP Q63T74 ? ? 'expression tag' 17 10 1 3LR5 THR A 11 ? UNP Q63T74 ? ? 'expression tag' 18 11 1 3LR5 LEU A 12 ? UNP Q63T74 ? ? 'expression tag' 19 12 1 3LR5 GLU A 13 ? UNP Q63T74 ? ? 'expression tag' 20 13 1 3LR5 ALA A 14 ? UNP Q63T74 ? ? 'expression tag' 21 14 1 3LR5 GLN A 15 ? UNP Q63T74 ? ? 'expression tag' 22 15 1 3LR5 THR A 16 ? UNP Q63T74 ? ? 'expression tag' 23 16 1 3LR5 GLN A 17 ? UNP Q63T74 ? ? 'expression tag' 24 17 1 3LR5 GLY A 18 ? UNP Q63T74 ? ? 'expression tag' 25 18 1 3LR5 PRO A 19 ? UNP Q63T74 ? ? 'expression tag' 26 19 1 3LR5 GLY A 20 ? UNP Q63T74 ? ? 'expression tag' 27 20 1 3LR5 SER A 21 ? UNP Q63T74 ? ? 'expression tag' 28 21 1 3LR5 MET A 22 ? UNP Q63T74 ? ? 'expression tag' 29 22 2 3LR5 MET B 1 ? UNP Q63T74 ? ? 'expression tag' 6 23 2 3LR5 ALA B 2 ? UNP Q63T74 ? ? 'expression tag' 7 24 2 3LR5 HIS B 3 ? UNP Q63T74 ? ? 'expression tag' 8 25 2 3LR5 HIS B 4 ? UNP Q63T74 ? ? 'expression tag' 9 26 2 3LR5 HIS B 5 ? UNP Q63T74 ? ? 'expression tag' 10 27 2 3LR5 HIS B 6 ? UNP Q63T74 ? ? 'expression tag' 11 28 2 3LR5 HIS B 7 ? UNP Q63T74 ? ? 'expression tag' 12 29 2 3LR5 HIS B 8 ? UNP Q63T74 ? ? 'expression tag' 13 30 2 3LR5 MET B 9 ? UNP Q63T74 ? ? 'expression tag' 16 31 2 3LR5 GLY B 10 ? UNP Q63T74 ? ? 'expression tag' 17 32 2 3LR5 THR B 11 ? UNP Q63T74 ? ? 'expression tag' 18 33 2 3LR5 LEU B 12 ? UNP Q63T74 ? ? 'expression tag' 19 34 2 3LR5 GLU B 13 ? UNP Q63T74 ? ? 'expression tag' 20 35 2 3LR5 ALA B 14 ? UNP Q63T74 ? ? 'expression tag' 21 36 2 3LR5 GLN B 15 ? UNP Q63T74 ? ? 'expression tag' 22 37 2 3LR5 THR B 16 ? UNP Q63T74 ? ? 'expression tag' 23 38 2 3LR5 GLN B 17 ? UNP Q63T74 ? ? 'expression tag' 24 39 2 3LR5 GLY B 18 ? UNP Q63T74 ? ? 'expression tag' 25 40 2 3LR5 PRO B 19 ? UNP Q63T74 ? ? 'expression tag' 26 41 2 3LR5 GLY B 20 ? UNP Q63T74 ? ? 'expression tag' 27 42 2 3LR5 SER B 21 ? UNP Q63T74 ? ? 'expression tag' 28 43 2 3LR5 MET B 22 ? UNP Q63T74 ? ? 'expression tag' 29 44 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2910 ? 1 MORE -10 ? 1 'SSA (A^2)' 14670 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details dimeric # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 34 ? SER A 54 ? GLN A 41 SER A 61 1 ? 21 HELX_P HELX_P2 2 LEU A 58 ? GLY A 71 ? LEU A 65 GLY A 78 1 ? 14 HELX_P HELX_P3 3 GLU A 89 ? GLY A 104 ? GLU A 96 GLY A 111 1 ? 16 HELX_P HELX_P4 4 ARG A 136 ? LEU A 139 ? ARG A 143 LEU A 146 5 ? 4 HELX_P HELX_P5 5 ARG B 29 ? SER B 54 ? ARG B 36 SER B 61 1 ? 26 HELX_P HELX_P6 6 ASP B 55 ? ASP B 57 ? ASP B 62 ASP B 64 5 ? 3 HELX_P HELX_P7 7 LEU B 58 ? GLY B 71 ? LEU B 65 GLY B 78 1 ? 14 HELX_P HELX_P8 8 GLU B 89 ? GLY B 104 ? GLU B 96 GLY B 111 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 72 ? PRO A 76 ? VAL A 79 PRO A 83 A 2 ASP A 128 ? LEU A 134 ? ASP A 135 LEU A 141 A 3 ILE A 116 ? ILE A 125 ? ILE A 123 ILE A 132 A 4 ILE A 109 ? VAL A 113 ? ILE A 116 VAL A 120 A 5 PHE A 83 ? LEU A 85 ? PHE A 90 LEU A 92 B 1 VAL B 72 ? PRO B 76 ? VAL B 79 PRO B 83 B 2 ASP B 128 ? LEU B 134 ? ASP B 135 LEU B 141 B 3 ILE B 116 ? ILE B 125 ? ILE B 123 ILE B 132 B 4 ILE B 109 ? VAL B 113 ? ILE B 116 VAL B 120 B 5 PHE B 83 ? LYS B 84 ? PHE B 90 LYS B 91 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 73 ? N ARG A 80 O ALA A 133 ? O ALA A 140 A 2 3 O LEU A 134 ? O LEU A 141 N VAL A 119 ? N VAL A 126 A 3 4 O TRP A 120 ? O TRP A 127 N ALA A 110 ? N ALA A 117 A 4 5 O GLN A 111 ? O GLN A 118 N LYS A 84 ? N LYS A 91 B 1 2 N ARG B 73 ? N ARG B 80 O ALA B 133 ? O ALA B 140 B 2 3 O ASP B 128 ? O ASP B 135 N ILE B 125 ? N ILE B 132 B 3 4 O TRP B 120 ? O TRP B 127 N ALA B 110 ? N ALA B 117 B 4 5 O GLN B 111 ? O GLN B 118 N LYS B 84 ? N LYS B 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IOD 1 ? 4 'BINDING SITE FOR RESIDUE IOD A 1' AC2 Software A IOD 2 ? 2 'BINDING SITE FOR RESIDUE IOD A 2' AC3 Software B IOD 3 ? 2 'BINDING SITE FOR RESIDUE IOD B 3' AC4 Software A IOD 4 ? 1 'BINDING SITE FOR RESIDUE IOD A 4' AC5 Software B IOD 5 ? 2 'BINDING SITE FOR RESIDUE IOD B 5' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLN A 34 ? GLN A 41 . ? 1_555 ? 2 AC1 4 LEU A 94 ? LEU A 101 . ? 1_555 ? 3 AC1 4 ASP A 98 ? ASP A 105 . ? 1_555 ? 4 AC1 4 ARG B 59 ? ARG B 66 . ? 3_645 ? 5 AC2 2 LEU A 38 ? LEU A 45 . ? 1_555 ? 6 AC2 2 ARG A 102 ? ARG A 109 . ? 1_555 ? 7 AC3 2 HOH H . ? HOH A 156 . ? 1_555 ? 8 AC3 2 HOH I . ? HOH B 165 . ? 1_555 ? 9 AC4 1 ASP A 115 ? ASP A 122 . ? 1_555 ? 10 AC5 2 SER B 112 ? SER B 119 . ? 1_555 ? 11 AC5 2 ASP B 115 ? ASP B 122 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 133 ? ? 56.52 -124.52 2 1 SER B 119 ? ? -173.41 131.54 3 1 ASP B 133 ? ? 56.75 -117.04 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.250 _diffrn_reflns.pdbx_d_res_low ? _diffrn_reflns.pdbx_number_obs 25375 _diffrn_reflns.pdbx_Rmerge_I_obs 0.084 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI ? _diffrn_reflns.pdbx_redundancy ? _diffrn_reflns.pdbx_percent_possible_obs 97.30 _diffrn_reflns.number 90482 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 10.06 19.75 257 ? 0.029 ? ? ? 87.10 1 7.12 10.06 528 ? 0.036 ? ? ? 99.40 1 5.81 7.12 680 ? 0.048 ? ? ? 99.70 1 5.03 5.81 828 ? 0.045 ? ? ? 100.00 1 4.50 5.03 921 ? 0.039 ? ? ? 99.90 1 4.11 4.50 1019 ? 0.040 ? ? ? 99.90 1 3.80 4.11 1073 ? 0.050 ? ? ? 97.40 1 3.56 3.80 1099 ? 0.070 ? ? ? 90.40 1 3.35 3.56 1249 ? 0.067 ? ? ? 99.10 1 3.18 3.35 1358 ? 0.075 ? ? ? 100.00 1 3.03 3.18 1408 ? 0.092 ? ? ? 100.00 1 2.90 3.03 1495 ? 0.106 ? ? ? 100.00 1 2.79 2.90 1535 ? 0.136 ? ? ? 100.00 1 2.69 2.79 1622 ? 0.155 ? ? ? 100.00 1 2.60 2.69 1646 ? 0.181 ? ? ? 100.00 1 2.52 2.60 1730 ? 0.207 ? ? ? 100.00 1 2.44 2.52 1752 ? 0.236 ? ? ? 100.00 1 2.37 2.44 1858 ? 0.277 ? ? ? 99.90 1 2.31 2.37 1876 ? 0.344 ? ? ? 99.80 1 2.25 2.31 1441 ? 0.433 ? ? ? 74.40 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 30.3648 40.1845 17.5849 0.0200 0.0627 0.0270 -0.0097 0.0003 -0.0061 1.2785 0.9078 -0.0989 0.3233 -0.1146 -0.2433 -0.0083 0.0248 -0.0165 0.0807 -0.1169 -0.0170 0.0312 -0.0277 -0.0188 'X-RAY DIFFRACTION' 2 ? refined 15.7704 46.2378 34.5005 0.0330 0.0323 0.0520 0.0054 0.0097 -0.0065 0.1817 0.4925 1.3257 0.1253 -0.1172 -0.7541 0.0737 -0.0073 -0.0664 -0.0216 0.0427 0.0813 0.0225 -0.0395 -0.0023 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A -10 A 9999 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B -10 B 9999 ? . . . . ? # loop_ _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.reflns_acentric _pdbx_phasing_MAD_shell.fom_acentric _pdbx_phasing_MAD_shell.reflns_centric _pdbx_phasing_MAD_shell.fom_centric _pdbx_phasing_MAD_shell.reflns _pdbx_phasing_MAD_shell.fom 9.79 19.75 99 0.592 77 0.126 178 0.386 7.39 9.79 167 0.539 81 0.149 251 0.412 6.18 7.39 216 0.586 83 0.209 300 0.482 5.42 6.18 260 0.574 83 0.227 344 0.490 4.88 5.42 303 0.504 83 0.177 386 0.433 4.48 4.88 337 0.537 81 0.146 419 0.460 4.16 4.48 358 0.471 85 0.122 444 0.404 3.91 4.16 384 0.475 74 0.142 462 0.418 3.69 3.91 394 0.442 72 0.159 472 0.393 3.51 3.69 402 0.407 71 0.142 480 0.362 3.35 3.51 470 0.438 89 0.139 560 0.390 3.21 3.35 499 0.459 82 0.165 581 0.418 3.09 3.21 517 0.437 83 0.167 600 0.400 2.98 3.09 531 0.427 83 0.149 614 0.390 2.88 2.98 558 0.394 89 0.177 647 0.365 2.79 2.88 574 0.381 79 0.175 653 0.356 2.71 2.79 595 0.390 86 0.145 681 0.359 2.63 2.71 615 0.374 74 0.180 689 0.353 2.56 2.63 641 0.337 93 0.216 734 0.322 2.50 2.56 644 0.344 78 0.153 722 0.324 # _phasing.method SAD # _phasing_MAD.entry_id 3LR5 _phasing_MAD.pdbx_d_res_high 2.50 _phasing_MAD.pdbx_d_res_low 19.75 _phasing_MAD.pdbx_reflns_acentric 8564 _phasing_MAD.pdbx_fom_acentric 0.429 _phasing_MAD.pdbx_reflns_centric 1626 _phasing_MAD.pdbx_fom_centric 0.164 _phasing_MAD.pdbx_reflns 10217 _phasing_MAD.pdbx_fom 0.386 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 8 ? A MET 1 2 1 Y 1 A ALA 9 ? A ALA 2 3 1 Y 1 A HIS 10 ? A HIS 3 4 1 Y 1 A HIS 11 ? A HIS 4 5 1 Y 1 A HIS 12 ? A HIS 5 6 1 Y 1 A HIS 13 ? A HIS 6 7 1 Y 1 A HIS 14 ? A HIS 7 8 1 Y 1 A HIS 15 ? A HIS 8 9 1 Y 1 A MET 16 ? A MET 9 10 1 Y 1 A GLY 17 ? A GLY 10 11 1 Y 1 A THR 18 ? A THR 11 12 1 Y 1 A LEU 19 ? A LEU 12 13 1 Y 1 A GLU 20 ? A GLU 13 14 1 Y 1 A ALA 21 ? A ALA 14 15 1 Y 1 A GLN 22 ? A GLN 15 16 1 Y 1 A THR 23 ? A THR 16 17 1 Y 1 A GLN 24 ? A GLN 17 18 1 Y 1 A GLY 25 ? A GLY 18 19 1 Y 1 A PRO 26 ? A PRO 19 20 1 Y 1 A GLY 27 ? A GLY 20 21 1 Y 1 A SER 28 ? A SER 21 22 1 Y 1 A THR 148 ? A THR 141 23 1 Y 1 A VAL 149 ? A VAL 142 24 1 Y 1 A THR 150 ? A THR 143 25 1 Y 1 A GLY 151 ? A GLY 144 26 1 Y 1 B MET 6 ? B MET 1 27 1 Y 1 B MET 16 ? B MET 9 28 1 Y 1 B GLY 17 ? B GLY 10 29 1 Y 1 B THR 18 ? B THR 11 30 1 Y 1 B LEU 19 ? B LEU 12 31 1 Y 1 B GLU 20 ? B GLU 13 32 1 Y 1 B ALA 21 ? B ALA 14 33 1 Y 1 B GLN 22 ? B GLN 15 34 1 Y 1 B THR 23 ? B THR 16 35 1 Y 1 B GLN 24 ? B GLN 17 36 1 Y 1 B GLY 25 ? B GLY 18 37 1 Y 1 B PRO 26 ? B PRO 19 38 1 Y 1 B GLY 27 ? B GLY 20 39 1 Y 1 B SER 28 ? B SER 21 40 1 Y 1 B MET 29 ? B MET 22 41 1 Y 1 B SER 30 ? B SER 23 42 1 Y 1 B PHE 31 ? B PHE 24 43 1 Y 1 B ARG 32 ? B ARG 25 44 1 Y 1 B VAL 33 ? B VAL 26 45 1 Y 1 B ILE 34 ? B ILE 27 46 1 Y 1 B GLU 35 ? B GLU 28 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 IOD I I N N 169 LEU N N N N 170 LEU CA C N S 171 LEU C C N N 172 LEU O O N N 173 LEU CB C N N 174 LEU CG C N N 175 LEU CD1 C N N 176 LEU CD2 C N N 177 LEU OXT O N N 178 LEU H H N N 179 LEU H2 H N N 180 LEU HA H N N 181 LEU HB2 H N N 182 LEU HB3 H N N 183 LEU HG H N N 184 LEU HD11 H N N 185 LEU HD12 H N N 186 LEU HD13 H N N 187 LEU HD21 H N N 188 LEU HD22 H N N 189 LEU HD23 H N N 190 LEU HXT H N N 191 LYS N N N N 192 LYS CA C N S 193 LYS C C N N 194 LYS O O N N 195 LYS CB C N N 196 LYS CG C N N 197 LYS CD C N N 198 LYS CE C N N 199 LYS NZ N N N 200 LYS OXT O N N 201 LYS H H N N 202 LYS H2 H N N 203 LYS HA H N N 204 LYS HB2 H N N 205 LYS HB3 H N N 206 LYS HG2 H N N 207 LYS HG3 H N N 208 LYS HD2 H N N 209 LYS HD3 H N N 210 LYS HE2 H N N 211 LYS HE3 H N N 212 LYS HZ1 H N N 213 LYS HZ2 H N N 214 LYS HZ3 H N N 215 LYS HXT H N N 216 MET N N N N 217 MET CA C N S 218 MET C C N N 219 MET O O N N 220 MET CB C N N 221 MET CG C N N 222 MET SD S N N 223 MET CE C N N 224 MET OXT O N N 225 MET H H N N 226 MET H2 H N N 227 MET HA H N N 228 MET HB2 H N N 229 MET HB3 H N N 230 MET HG2 H N N 231 MET HG3 H N N 232 MET HE1 H N N 233 MET HE2 H N N 234 MET HE3 H N N 235 MET HXT H N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 THR N N N N 291 THR CA C N S 292 THR C C N N 293 THR O O N N 294 THR CB C N R 295 THR OG1 O N N 296 THR CG2 C N N 297 THR OXT O N N 298 THR H H N N 299 THR H2 H N N 300 THR HA H N N 301 THR HB H N N 302 THR HG1 H N N 303 THR HG21 H N N 304 THR HG22 H N N 305 THR HG23 H N N 306 THR HXT H N N 307 TRP N N N N 308 TRP CA C N S 309 TRP C C N N 310 TRP O O N N 311 TRP CB C N N 312 TRP CG C Y N 313 TRP CD1 C Y N 314 TRP CD2 C Y N 315 TRP NE1 N Y N 316 TRP CE2 C Y N 317 TRP CE3 C Y N 318 TRP CZ2 C Y N 319 TRP CZ3 C Y N 320 TRP CH2 C Y N 321 TRP OXT O N N 322 TRP H H N N 323 TRP H2 H N N 324 TRP HA H N N 325 TRP HB2 H N N 326 TRP HB3 H N N 327 TRP HD1 H N N 328 TRP HE1 H N N 329 TRP HE3 H N N 330 TRP HZ2 H N N 331 TRP HZ3 H N N 332 TRP HH2 H N N 333 TRP HXT H N N 334 TYR N N N N 335 TYR CA C N S 336 TYR C C N N 337 TYR O O N N 338 TYR CB C N N 339 TYR CG C Y N 340 TYR CD1 C Y N 341 TYR CD2 C Y N 342 TYR CE1 C Y N 343 TYR CE2 C Y N 344 TYR CZ C Y N 345 TYR OH O N N 346 TYR OXT O N N 347 TYR H H N N 348 TYR H2 H N N 349 TYR HA H N N 350 TYR HB2 H N N 351 TYR HB3 H N N 352 TYR HD1 H N N 353 TYR HD2 H N N 354 TYR HE1 H N N 355 TYR HE2 H N N 356 TYR HH H N N 357 TYR HXT H N N 358 VAL N N N N 359 VAL CA C N S 360 VAL C C N N 361 VAL O O N N 362 VAL CB C N N 363 VAL CG1 C N N 364 VAL CG2 C N N 365 VAL OXT O N N 366 VAL H H N N 367 VAL H2 H N N 368 VAL HA H N N 369 VAL HB H N N 370 VAL HG11 H N N 371 VAL HG12 H N N 372 VAL HG13 H N N 373 VAL HG21 H N N 374 VAL HG22 H N N 375 VAL HG23 H N N 376 VAL HXT H N N 377 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 3LR5 _atom_sites.fract_transf_matrix[1][1] 0.023787 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013156 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011276 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C I N O # loop_