data_3MA5 # _entry.id 3MA5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3MA5 pdb_00003ma5 10.2210/pdb3ma5/pdb RCSB RCSB058300 ? ? WWPDB D_1000058300 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2KCV 'The same protein, NMR structure.' unspecified PDB 2KCL 'The same protein, NMR structure.' unspecified TargetDB SrR115c . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3MA5 _pdbx_database_status.recvd_initial_deposition_date 2010-03-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vorobiev, S.' 1 'Neely, H.' 2 'Seetharaman, J.' 3 'Wang, H.' 4 'Foote, E.L.' 5 'Ciccosanti, C.' 6 'Mao, L.' 7 'Xiao, R.' 8 'Acton, T.B.' 9 'Montelione, G.T.' 10 'Hunt, J.F.' 11 'Tong, L.' 12 'Northeast Structural Genomics Consortium (NESG)' 13 # _citation.id primary _citation.title 'Crystal structure of the tetratricopeptide repeat domain protein Q2S6C5_SALRD from Salinibacter ruber.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vorobiev, S.' 1 ? primary 'Neely, H.' 2 ? primary 'Seetharaman, J.' 3 ? primary 'Wang, H.' 4 ? primary 'Foote, E.L.' 5 ? primary 'Ciccosanti, C.' 6 ? primary 'Mao, L.' 7 ? primary 'Xiao, R.' 8 ? primary 'Acton, T.B.' 9 ? primary 'Montelione, G.T.' 10 ? primary 'Hunt, J.F.' 11 ? primary 'Tong, L.' 12 ? # _cell.entry_id 3MA5 _cell.length_a 84.360 _cell.length_b 84.360 _cell.length_c 227.547 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MA5 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tetratricopeptide repeat domain protein' 11618.613 4 ? ? ? ? 2 water nat water 18.015 8 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDL SELQDAKLKAEGLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MEDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDL SELQDAKLKAEGLEHHHHHH ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier SrR115c # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ASP n 1 4 PRO n 1 5 GLU n 1 6 ASP n 1 7 PRO n 1 8 PHE n 1 9 THR n 1 10 ARG n 1 11 TYR n 1 12 ALA n 1 13 LEU n 1 14 ALA n 1 15 GLN n 1 16 GLU n 1 17 HIS n 1 18 LEU n 1 19 LYS n 1 20 HIS n 1 21 ASP n 1 22 ASN n 1 23 ALA n 1 24 SER n 1 25 ARG n 1 26 ALA n 1 27 LEU n 1 28 ALA n 1 29 LEU n 1 30 PHE n 1 31 GLU n 1 32 GLU n 1 33 LEU n 1 34 VAL n 1 35 GLU n 1 36 THR n 1 37 ASP n 1 38 PRO n 1 39 ASP n 1 40 TYR n 1 41 VAL n 1 42 GLY n 1 43 THR n 1 44 TYR n 1 45 TYR n 1 46 HIS n 1 47 LEU n 1 48 GLY n 1 49 LYS n 1 50 LEU n 1 51 TYR n 1 52 GLU n 1 53 ARG n 1 54 LEU n 1 55 ASP n 1 56 ARG n 1 57 THR n 1 58 ASP n 1 59 ASP n 1 60 ALA n 1 61 ILE n 1 62 ASP n 1 63 THR n 1 64 TYR n 1 65 ALA n 1 66 GLN n 1 67 GLY n 1 68 ILE n 1 69 GLU n 1 70 VAL n 1 71 ALA n 1 72 ARG n 1 73 GLU n 1 74 GLU n 1 75 GLY n 1 76 THR n 1 77 GLN n 1 78 LYS n 1 79 ASP n 1 80 LEU n 1 81 SER n 1 82 GLU n 1 83 LEU n 1 84 GLN n 1 85 ASP n 1 86 ALA n 1 87 LYS n 1 88 LEU n 1 89 LYS n 1 90 ALA n 1 91 GLU n 1 92 GLY n 1 93 LEU n 1 94 GLU n 1 95 HIS n 1 96 HIS n 1 97 HIS n 1 98 HIS n 1 99 HIS n 1 100 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SRU_0103 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'HAMAP DSM 13855' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salinibacter ruber' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 309807 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) +Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET 21-23C' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2S6C5_SALRD _struct_ref.pdbx_db_accession Q2S6C5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLS ELQDAKLKAEG ; _struct_ref.pdbx_align_begin 56 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MA5 A 2 ? 92 ? Q2S6C5 56 ? 146 ? 56 146 2 1 3MA5 B 2 ? 92 ? Q2S6C5 56 ? 146 ? 56 146 3 1 3MA5 C 2 ? 92 ? Q2S6C5 56 ? 146 ? 56 146 4 1 3MA5 D 2 ? 92 ? Q2S6C5 56 ? 146 ? 56 146 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3MA5 MET A 1 ? UNP Q2S6C5 ? ? 'expression tag' 55 1 1 3MA5 LEU A 93 ? UNP Q2S6C5 ? ? 'expression tag' 147 2 1 3MA5 GLU A 94 ? UNP Q2S6C5 ? ? 'expression tag' 148 3 1 3MA5 HIS A 95 ? UNP Q2S6C5 ? ? 'expression tag' 149 4 1 3MA5 HIS A 96 ? UNP Q2S6C5 ? ? 'expression tag' 150 5 1 3MA5 HIS A 97 ? UNP Q2S6C5 ? ? 'expression tag' 151 6 1 3MA5 HIS A 98 ? UNP Q2S6C5 ? ? 'expression tag' 152 7 1 3MA5 HIS A 99 ? UNP Q2S6C5 ? ? 'expression tag' 153 8 1 3MA5 HIS A 100 ? UNP Q2S6C5 ? ? 'expression tag' 154 9 2 3MA5 MET B 1 ? UNP Q2S6C5 ? ? 'expression tag' 55 10 2 3MA5 LEU B 93 ? UNP Q2S6C5 ? ? 'expression tag' 147 11 2 3MA5 GLU B 94 ? UNP Q2S6C5 ? ? 'expression tag' 148 12 2 3MA5 HIS B 95 ? UNP Q2S6C5 ? ? 'expression tag' 149 13 2 3MA5 HIS B 96 ? UNP Q2S6C5 ? ? 'expression tag' 150 14 2 3MA5 HIS B 97 ? UNP Q2S6C5 ? ? 'expression tag' 151 15 2 3MA5 HIS B 98 ? UNP Q2S6C5 ? ? 'expression tag' 152 16 2 3MA5 HIS B 99 ? UNP Q2S6C5 ? ? 'expression tag' 153 17 2 3MA5 HIS B 100 ? UNP Q2S6C5 ? ? 'expression tag' 154 18 3 3MA5 MET C 1 ? UNP Q2S6C5 ? ? 'expression tag' 55 19 3 3MA5 LEU C 93 ? UNP Q2S6C5 ? ? 'expression tag' 147 20 3 3MA5 GLU C 94 ? UNP Q2S6C5 ? ? 'expression tag' 148 21 3 3MA5 HIS C 95 ? UNP Q2S6C5 ? ? 'expression tag' 149 22 3 3MA5 HIS C 96 ? UNP Q2S6C5 ? ? 'expression tag' 150 23 3 3MA5 HIS C 97 ? UNP Q2S6C5 ? ? 'expression tag' 151 24 3 3MA5 HIS C 98 ? UNP Q2S6C5 ? ? 'expression tag' 152 25 3 3MA5 HIS C 99 ? UNP Q2S6C5 ? ? 'expression tag' 153 26 3 3MA5 HIS C 100 ? UNP Q2S6C5 ? ? 'expression tag' 154 27 4 3MA5 MET D 1 ? UNP Q2S6C5 ? ? 'expression tag' 55 28 4 3MA5 LEU D 93 ? UNP Q2S6C5 ? ? 'expression tag' 147 29 4 3MA5 GLU D 94 ? UNP Q2S6C5 ? ? 'expression tag' 148 30 4 3MA5 HIS D 95 ? UNP Q2S6C5 ? ? 'expression tag' 149 31 4 3MA5 HIS D 96 ? UNP Q2S6C5 ? ? 'expression tag' 150 32 4 3MA5 HIS D 97 ? UNP Q2S6C5 ? ? 'expression tag' 151 33 4 3MA5 HIS D 98 ? UNP Q2S6C5 ? ? 'expression tag' 152 34 4 3MA5 HIS D 99 ? UNP Q2S6C5 ? ? 'expression tag' 153 35 4 3MA5 HIS D 100 ? UNP Q2S6C5 ? ? 'expression tag' 154 36 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MA5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 51.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'microbatch under Paraffin oil' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details '45-60% PEG 400, 0.03-0.05M potassium chloride, 0.1M Bis-Tris, pH 7.0, microbatch under Paraffin oil, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2010-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97869 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97869 # _reflns.entry_id 3MA5 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.8 _reflns.number_obs 22372 _reflns.number_all 22394 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 59.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 21.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.941 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.47 _reflns_shell.pdbx_redundancy 22.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2244 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3MA5 _refine.ls_number_reflns_obs 22291 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.25 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.885 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.80 _refine.ls_R_factor_obs 0.2408 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2391 _refine.ls_R_factor_R_free 0.2749 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.89 _refine.ls_number_reflns_R_free 1089 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.333 _refine.solvent_model_param_bsol 72.224 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;There are four molecules (two dimers) in AU. The fourth molecule (D) has very bad defined electron density and was not found by MR. Based on the partial electron density and dimer structure C-terminal part (78-145) of molecule D was built; however B-factor for D molecule is higher than for A-C molecules. ; _refine.pdbx_starting_model 'PDB ENTRY 2KCL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.42 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2704 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 2712 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 44.885 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 2750 'X-RAY DIFFRACTION' ? f_angle_d 1.488 ? ? 3720 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 23.608 ? ? 1009 'X-RAY DIFFRACTION' ? f_chiral_restr 0.112 ? ? 406 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 500 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.7992 2.9265 2629 0.3422 100.00 0.3432 . . 175 . . . . 'X-RAY DIFFRACTION' . 2.9265 3.0808 2621 0.3087 100.00 0.4029 . . 127 . . . . 'X-RAY DIFFRACTION' . 3.0808 3.2738 2687 0.2849 100.00 0.3077 . . 122 . . . . 'X-RAY DIFFRACTION' . 3.2738 3.5264 2638 0.2500 100.00 0.2761 . . 155 . . . . 'X-RAY DIFFRACTION' . 3.5264 3.8811 2647 0.2449 100.00 0.3920 . . 127 . . . . 'X-RAY DIFFRACTION' . 3.8811 4.4423 2652 0.2116 100.00 0.2372 . . 152 . . . . 'X-RAY DIFFRACTION' . 4.4423 5.5952 2665 0.2224 100.00 0.2358 . . 129 . . . . 'X-RAY DIFFRACTION' . 5.5952 44.8904 2663 0.2271 99.00 0.2457 . . 102 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3MA5 _struct.title ;Crystal structure of the tetratricopeptide repeat domain protein Q2S6C5_SALRD from Salinibacter ruber. Northeast Structural Genomics Consortium Target SrR115c. ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MA5 _struct_keywords.pdbx_keywords 'structural genomics, unknown function' _struct_keywords.text ;Tetratricopeptide repeat domain protein, NESG, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, unknown function ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? # _struct_biol.id 1 _struct_biol.details 'Dimer according to gel filtration' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 6 ? HIS A 20 ? ASP A 60 HIS A 74 1 ? 15 HELX_P HELX_P2 2 ASN A 22 ? ASP A 37 ? ASN A 76 ASP A 91 1 ? 16 HELX_P HELX_P3 3 VAL A 41 ? LEU A 54 ? VAL A 95 LEU A 108 1 ? 14 HELX_P HELX_P4 4 ARG A 56 ? GLY A 75 ? ARG A 110 GLY A 129 1 ? 20 HELX_P HELX_P5 5 THR A 76 ? GLY A 92 ? THR A 130 GLY A 146 1 ? 17 HELX_P HELX_P6 6 ASP B 6 ? HIS B 20 ? ASP B 60 HIS B 74 1 ? 15 HELX_P HELX_P7 7 ASN B 22 ? ASP B 37 ? ASN B 76 ASP B 91 1 ? 16 HELX_P HELX_P8 8 GLY B 42 ? LEU B 54 ? GLY B 96 LEU B 108 1 ? 13 HELX_P HELX_P9 9 ARG B 56 ? GLY B 75 ? ARG B 110 GLY B 129 1 ? 20 HELX_P HELX_P10 10 THR B 76 ? LEU B 93 ? THR B 130 LEU B 147 1 ? 18 HELX_P HELX_P11 11 ASP C 6 ? HIS C 20 ? ASP C 60 HIS C 74 1 ? 15 HELX_P HELX_P12 12 ASN C 22 ? ASP C 37 ? ASN C 76 ASP C 91 1 ? 16 HELX_P HELX_P13 13 GLY C 42 ? LEU C 54 ? GLY C 96 LEU C 108 1 ? 13 HELX_P HELX_P14 14 ARG C 56 ? GLU C 74 ? ARG C 110 GLU C 128 1 ? 19 HELX_P HELX_P15 15 THR C 76 ? GLY C 92 ? THR C 130 GLY C 146 1 ? 17 HELX_P HELX_P16 16 ALA D 26 ? ASP D 37 ? ALA D 80 ASP D 91 1 ? 12 HELX_P HELX_P17 17 GLY D 42 ? LEU D 47 ? GLY D 96 LEU D 101 1 ? 6 HELX_P HELX_P18 18 LEU D 47 ? LEU D 54 ? LEU D 101 LEU D 108 1 ? 8 HELX_P HELX_P19 19 THR D 57 ? TYR D 64 ? THR D 111 TYR D 118 1 ? 8 HELX_P HELX_P20 20 ALA D 65 ? GLY D 75 ? ALA D 119 GLY D 129 1 ? 11 HELX_P HELX_P21 21 THR D 76 ? GLU D 91 ? THR D 130 GLU D 145 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 3MA5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MA5 _atom_sites.fract_transf_matrix[1][1] 0.011854 _atom_sites.fract_transf_matrix[1][2] 0.006844 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013688 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004395 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 55 ? ? ? A . n A 1 2 GLU 2 56 ? ? ? A . n A 1 3 ASP 3 57 ? ? ? A . n A 1 4 PRO 4 58 ? ? ? A . n A 1 5 GLU 5 59 59 GLU ALA A . n A 1 6 ASP 6 60 60 ASP ASP A . n A 1 7 PRO 7 61 61 PRO PRO A . n A 1 8 PHE 8 62 62 PHE PHE A . n A 1 9 THR 9 63 63 THR THR A . n A 1 10 ARG 10 64 64 ARG ARG A . n A 1 11 TYR 11 65 65 TYR TYR A . n A 1 12 ALA 12 66 66 ALA ALA A . n A 1 13 LEU 13 67 67 LEU LEU A . n A 1 14 ALA 14 68 68 ALA ALA A . n A 1 15 GLN 15 69 69 GLN GLN A . n A 1 16 GLU 16 70 70 GLU GLU A . n A 1 17 HIS 17 71 71 HIS HIS A . n A 1 18 LEU 18 72 72 LEU LEU A . n A 1 19 LYS 19 73 73 LYS LYS A . n A 1 20 HIS 20 74 74 HIS HIS A . n A 1 21 ASP 21 75 75 ASP ASP A . n A 1 22 ASN 22 76 76 ASN ASN A . n A 1 23 ALA 23 77 77 ALA ALA A . n A 1 24 SER 24 78 78 SER SER A . n A 1 25 ARG 25 79 79 ARG ARG A . n A 1 26 ALA 26 80 80 ALA ALA A . n A 1 27 LEU 27 81 81 LEU LEU A . n A 1 28 ALA 28 82 82 ALA ALA A . n A 1 29 LEU 29 83 83 LEU LEU A . n A 1 30 PHE 30 84 84 PHE PHE A . n A 1 31 GLU 31 85 85 GLU GLU A . n A 1 32 GLU 32 86 86 GLU GLU A . n A 1 33 LEU 33 87 87 LEU LEU A . n A 1 34 VAL 34 88 88 VAL VAL A . n A 1 35 GLU 35 89 89 GLU GLU A . n A 1 36 THR 36 90 90 THR THR A . n A 1 37 ASP 37 91 91 ASP ASP A . n A 1 38 PRO 38 92 92 PRO PRO A . n A 1 39 ASP 39 93 93 ASP ASP A . n A 1 40 TYR 40 94 94 TYR TYR A . n A 1 41 VAL 41 95 95 VAL VAL A . n A 1 42 GLY 42 96 96 GLY GLY A . n A 1 43 THR 43 97 97 THR THR A . n A 1 44 TYR 44 98 98 TYR TYR A . n A 1 45 TYR 45 99 99 TYR TYR A . n A 1 46 HIS 46 100 100 HIS HIS A . n A 1 47 LEU 47 101 101 LEU LEU A . n A 1 48 GLY 48 102 102 GLY GLY A . n A 1 49 LYS 49 103 103 LYS LYS A . n A 1 50 LEU 50 104 104 LEU LEU A . n A 1 51 TYR 51 105 105 TYR TYR A . n A 1 52 GLU 52 106 106 GLU GLU A . n A 1 53 ARG 53 107 107 ARG ARG A . n A 1 54 LEU 54 108 108 LEU LEU A . n A 1 55 ASP 55 109 109 ASP ASP A . n A 1 56 ARG 56 110 110 ARG ARG A . n A 1 57 THR 57 111 111 THR THR A . n A 1 58 ASP 58 112 112 ASP ASP A . n A 1 59 ASP 59 113 113 ASP ASP A . n A 1 60 ALA 60 114 114 ALA ALA A . n A 1 61 ILE 61 115 115 ILE ILE A . n A 1 62 ASP 62 116 116 ASP ASP A . n A 1 63 THR 63 117 117 THR THR A . n A 1 64 TYR 64 118 118 TYR TYR A . n A 1 65 ALA 65 119 119 ALA ALA A . n A 1 66 GLN 66 120 120 GLN GLN A . n A 1 67 GLY 67 121 121 GLY GLY A . n A 1 68 ILE 68 122 122 ILE ILE A . n A 1 69 GLU 69 123 123 GLU GLU A . n A 1 70 VAL 70 124 124 VAL VAL A . n A 1 71 ALA 71 125 125 ALA ALA A . n A 1 72 ARG 72 126 126 ARG ARG A . n A 1 73 GLU 73 127 127 GLU GLU A . n A 1 74 GLU 74 128 128 GLU GLU A . n A 1 75 GLY 75 129 129 GLY GLY A . n A 1 76 THR 76 130 130 THR THR A . n A 1 77 GLN 77 131 131 GLN GLN A . n A 1 78 LYS 78 132 132 LYS LYS A . n A 1 79 ASP 79 133 133 ASP ASP A . n A 1 80 LEU 80 134 134 LEU LEU A . n A 1 81 SER 81 135 135 SER SER A . n A 1 82 GLU 82 136 136 GLU GLU A . n A 1 83 LEU 83 137 137 LEU LEU A . n A 1 84 GLN 84 138 138 GLN GLN A . n A 1 85 ASP 85 139 139 ASP ASP A . n A 1 86 ALA 86 140 140 ALA ALA A . n A 1 87 LYS 87 141 141 LYS LYS A . n A 1 88 LEU 88 142 142 LEU LEU A . n A 1 89 LYS 89 143 143 LYS LYS A . n A 1 90 ALA 90 144 144 ALA ALA A . n A 1 91 GLU 91 145 145 GLU GLU A . n A 1 92 GLY 92 146 146 GLY GLY A . n A 1 93 LEU 93 147 147 LEU LEU A . n A 1 94 GLU 94 148 148 GLU GLU A . n A 1 95 HIS 95 149 ? ? ? A . n A 1 96 HIS 96 150 ? ? ? A . n A 1 97 HIS 97 151 ? ? ? A . n A 1 98 HIS 98 152 ? ? ? A . n A 1 99 HIS 99 153 ? ? ? A . n A 1 100 HIS 100 154 ? ? ? A . n B 1 1 MET 1 55 ? ? ? B . n B 1 2 GLU 2 56 ? ? ? B . n B 1 3 ASP 3 57 ? ? ? B . n B 1 4 PRO 4 58 ? ? ? B . n B 1 5 GLU 5 59 59 GLU ALA B . n B 1 6 ASP 6 60 60 ASP ASP B . n B 1 7 PRO 7 61 61 PRO PRO B . n B 1 8 PHE 8 62 62 PHE PHE B . n B 1 9 THR 9 63 63 THR THR B . n B 1 10 ARG 10 64 64 ARG ARG B . n B 1 11 TYR 11 65 65 TYR TYR B . n B 1 12 ALA 12 66 66 ALA ALA B . n B 1 13 LEU 13 67 67 LEU LEU B . n B 1 14 ALA 14 68 68 ALA ALA B . n B 1 15 GLN 15 69 69 GLN GLN B . n B 1 16 GLU 16 70 70 GLU GLU B . n B 1 17 HIS 17 71 71 HIS HIS B . n B 1 18 LEU 18 72 72 LEU LEU B . n B 1 19 LYS 19 73 73 LYS LYS B . n B 1 20 HIS 20 74 74 HIS HIS B . n B 1 21 ASP 21 75 75 ASP ASP B . n B 1 22 ASN 22 76 76 ASN ASN B . n B 1 23 ALA 23 77 77 ALA ALA B . n B 1 24 SER 24 78 78 SER SER B . n B 1 25 ARG 25 79 79 ARG ARG B . n B 1 26 ALA 26 80 80 ALA ALA B . n B 1 27 LEU 27 81 81 LEU LEU B . n B 1 28 ALA 28 82 82 ALA ALA B . n B 1 29 LEU 29 83 83 LEU LEU B . n B 1 30 PHE 30 84 84 PHE PHE B . n B 1 31 GLU 31 85 85 GLU GLU B . n B 1 32 GLU 32 86 86 GLU GLU B . n B 1 33 LEU 33 87 87 LEU LEU B . n B 1 34 VAL 34 88 88 VAL VAL B . n B 1 35 GLU 35 89 89 GLU GLU B . n B 1 36 THR 36 90 90 THR THR B . n B 1 37 ASP 37 91 91 ASP ASP B . n B 1 38 PRO 38 92 92 PRO PRO B . n B 1 39 ASP 39 93 93 ASP ASP B . n B 1 40 TYR 40 94 94 TYR TYR B . n B 1 41 VAL 41 95 95 VAL VAL B . n B 1 42 GLY 42 96 96 GLY GLY B . n B 1 43 THR 43 97 97 THR THR B . n B 1 44 TYR 44 98 98 TYR TYR B . n B 1 45 TYR 45 99 99 TYR TYR B . n B 1 46 HIS 46 100 100 HIS HIS B . n B 1 47 LEU 47 101 101 LEU LEU B . n B 1 48 GLY 48 102 102 GLY GLY B . n B 1 49 LYS 49 103 103 LYS LYS B . n B 1 50 LEU 50 104 104 LEU LEU B . n B 1 51 TYR 51 105 105 TYR TYR B . n B 1 52 GLU 52 106 106 GLU GLU B . n B 1 53 ARG 53 107 107 ARG ARG B . n B 1 54 LEU 54 108 108 LEU LEU B . n B 1 55 ASP 55 109 109 ASP ASP B . n B 1 56 ARG 56 110 110 ARG ARG B . n B 1 57 THR 57 111 111 THR THR B . n B 1 58 ASP 58 112 112 ASP ASP B . n B 1 59 ASP 59 113 113 ASP ASP B . n B 1 60 ALA 60 114 114 ALA ALA B . n B 1 61 ILE 61 115 115 ILE ILE B . n B 1 62 ASP 62 116 116 ASP ASP B . n B 1 63 THR 63 117 117 THR THR B . n B 1 64 TYR 64 118 118 TYR TYR B . n B 1 65 ALA 65 119 119 ALA ALA B . n B 1 66 GLN 66 120 120 GLN GLN B . n B 1 67 GLY 67 121 121 GLY GLY B . n B 1 68 ILE 68 122 122 ILE ILE B . n B 1 69 GLU 69 123 123 GLU GLU B . n B 1 70 VAL 70 124 124 VAL VAL B . n B 1 71 ALA 71 125 125 ALA ALA B . n B 1 72 ARG 72 126 126 ARG ARG B . n B 1 73 GLU 73 127 127 GLU GLU B . n B 1 74 GLU 74 128 128 GLU GLU B . n B 1 75 GLY 75 129 129 GLY GLY B . n B 1 76 THR 76 130 130 THR THR B . n B 1 77 GLN 77 131 131 GLN GLN B . n B 1 78 LYS 78 132 132 LYS LYS B . n B 1 79 ASP 79 133 133 ASP ASP B . n B 1 80 LEU 80 134 134 LEU LEU B . n B 1 81 SER 81 135 135 SER SER B . n B 1 82 GLU 82 136 136 GLU GLU B . n B 1 83 LEU 83 137 137 LEU LEU B . n B 1 84 GLN 84 138 138 GLN GLN B . n B 1 85 ASP 85 139 139 ASP ASP B . n B 1 86 ALA 86 140 140 ALA ALA B . n B 1 87 LYS 87 141 141 LYS LYS B . n B 1 88 LEU 88 142 142 LEU LEU B . n B 1 89 LYS 89 143 143 LYS LYS B . n B 1 90 ALA 90 144 144 ALA ALA B . n B 1 91 GLU 91 145 145 GLU GLU B . n B 1 92 GLY 92 146 146 GLY GLY B . n B 1 93 LEU 93 147 147 LEU LEU B . n B 1 94 GLU 94 148 148 GLU GLU B . n B 1 95 HIS 95 149 ? ? ? B . n B 1 96 HIS 96 150 ? ? ? B . n B 1 97 HIS 97 151 ? ? ? B . n B 1 98 HIS 98 152 ? ? ? B . n B 1 99 HIS 99 153 ? ? ? B . n B 1 100 HIS 100 154 ? ? ? B . n C 1 1 MET 1 55 ? ? ? C . n C 1 2 GLU 2 56 ? ? ? C . n C 1 3 ASP 3 57 ? ? ? C . n C 1 4 PRO 4 58 ? ? ? C . n C 1 5 GLU 5 59 ? ? ? C . n C 1 6 ASP 6 60 60 ASP ASP C . n C 1 7 PRO 7 61 61 PRO PRO C . n C 1 8 PHE 8 62 62 PHE PHE C . n C 1 9 THR 9 63 63 THR THR C . n C 1 10 ARG 10 64 64 ARG ARG C . n C 1 11 TYR 11 65 65 TYR TYR C . n C 1 12 ALA 12 66 66 ALA ALA C . n C 1 13 LEU 13 67 67 LEU LEU C . n C 1 14 ALA 14 68 68 ALA ALA C . n C 1 15 GLN 15 69 69 GLN GLN C . n C 1 16 GLU 16 70 70 GLU GLU C . n C 1 17 HIS 17 71 71 HIS HIS C . n C 1 18 LEU 18 72 72 LEU LEU C . n C 1 19 LYS 19 73 73 LYS LYS C . n C 1 20 HIS 20 74 74 HIS HIS C . n C 1 21 ASP 21 75 75 ASP ASP C . n C 1 22 ASN 22 76 76 ASN ASN C . n C 1 23 ALA 23 77 77 ALA ALA C . n C 1 24 SER 24 78 78 SER SER C . n C 1 25 ARG 25 79 79 ARG ARG C . n C 1 26 ALA 26 80 80 ALA ALA C . n C 1 27 LEU 27 81 81 LEU LEU C . n C 1 28 ALA 28 82 82 ALA ALA C . n C 1 29 LEU 29 83 83 LEU LEU C . n C 1 30 PHE 30 84 84 PHE PHE C . n C 1 31 GLU 31 85 85 GLU GLU C . n C 1 32 GLU 32 86 86 GLU GLU C . n C 1 33 LEU 33 87 87 LEU LEU C . n C 1 34 VAL 34 88 88 VAL VAL C . n C 1 35 GLU 35 89 89 GLU GLU C . n C 1 36 THR 36 90 90 THR THR C . n C 1 37 ASP 37 91 91 ASP ASP C . n C 1 38 PRO 38 92 92 PRO PRO C . n C 1 39 ASP 39 93 93 ASP ASP C . n C 1 40 TYR 40 94 94 TYR TYR C . n C 1 41 VAL 41 95 95 VAL VAL C . n C 1 42 GLY 42 96 96 GLY GLY C . n C 1 43 THR 43 97 97 THR THR C . n C 1 44 TYR 44 98 98 TYR TYR C . n C 1 45 TYR 45 99 99 TYR TYR C . n C 1 46 HIS 46 100 100 HIS HIS C . n C 1 47 LEU 47 101 101 LEU LEU C . n C 1 48 GLY 48 102 102 GLY GLY C . n C 1 49 LYS 49 103 103 LYS LYS C . n C 1 50 LEU 50 104 104 LEU LEU C . n C 1 51 TYR 51 105 105 TYR TYR C . n C 1 52 GLU 52 106 106 GLU GLU C . n C 1 53 ARG 53 107 107 ARG ARG C . n C 1 54 LEU 54 108 108 LEU LEU C . n C 1 55 ASP 55 109 109 ASP ASP C . n C 1 56 ARG 56 110 110 ARG ARG C . n C 1 57 THR 57 111 111 THR THR C . n C 1 58 ASP 58 112 112 ASP ASP C . n C 1 59 ASP 59 113 113 ASP ASP C . n C 1 60 ALA 60 114 114 ALA ALA C . n C 1 61 ILE 61 115 115 ILE ILE C . n C 1 62 ASP 62 116 116 ASP ASP C . n C 1 63 THR 63 117 117 THR THR C . n C 1 64 TYR 64 118 118 TYR TYR C . n C 1 65 ALA 65 119 119 ALA ALA C . n C 1 66 GLN 66 120 120 GLN GLN C . n C 1 67 GLY 67 121 121 GLY GLY C . n C 1 68 ILE 68 122 122 ILE ILE C . n C 1 69 GLU 69 123 123 GLU GLU C . n C 1 70 VAL 70 124 124 VAL VAL C . n C 1 71 ALA 71 125 125 ALA ALA C . n C 1 72 ARG 72 126 126 ARG ARG C . n C 1 73 GLU 73 127 127 GLU GLU C . n C 1 74 GLU 74 128 128 GLU GLU C . n C 1 75 GLY 75 129 129 GLY GLY C . n C 1 76 THR 76 130 130 THR THR C . n C 1 77 GLN 77 131 131 GLN GLN C . n C 1 78 LYS 78 132 132 LYS LYS C . n C 1 79 ASP 79 133 133 ASP ASP C . n C 1 80 LEU 80 134 134 LEU LEU C . n C 1 81 SER 81 135 135 SER SER C . n C 1 82 GLU 82 136 136 GLU GLU C . n C 1 83 LEU 83 137 137 LEU LEU C . n C 1 84 GLN 84 138 138 GLN GLN C . n C 1 85 ASP 85 139 139 ASP ASP C . n C 1 86 ALA 86 140 140 ALA ALA C . n C 1 87 LYS 87 141 141 LYS LYS C . n C 1 88 LEU 88 142 142 LEU LEU C . n C 1 89 LYS 89 143 143 LYS LYS C . n C 1 90 ALA 90 144 144 ALA ALA C . n C 1 91 GLU 91 145 145 GLU GLU C . n C 1 92 GLY 92 146 146 GLY GLY C . n C 1 93 LEU 93 147 147 LEU LEU C . n C 1 94 GLU 94 148 148 GLU GLU C . n C 1 95 HIS 95 149 ? ? ? C . n C 1 96 HIS 96 150 ? ? ? C . n C 1 97 HIS 97 151 ? ? ? C . n C 1 98 HIS 98 152 ? ? ? C . n C 1 99 HIS 99 153 ? ? ? C . n C 1 100 HIS 100 154 ? ? ? C . n D 1 1 MET 1 55 ? ? ? D . n D 1 2 GLU 2 56 ? ? ? D . n D 1 3 ASP 3 57 ? ? ? D . n D 1 4 PRO 4 58 ? ? ? D . n D 1 5 GLU 5 59 ? ? ? D . n D 1 6 ASP 6 60 ? ? ? D . n D 1 7 PRO 7 61 ? ? ? D . n D 1 8 PHE 8 62 ? ? ? D . n D 1 9 THR 9 63 ? ? ? D . n D 1 10 ARG 10 64 ? ? ? D . n D 1 11 TYR 11 65 ? ? ? D . n D 1 12 ALA 12 66 ? ? ? D . n D 1 13 LEU 13 67 ? ? ? D . n D 1 14 ALA 14 68 ? ? ? D . n D 1 15 GLN 15 69 ? ? ? D . n D 1 16 GLU 16 70 ? ? ? D . n D 1 17 HIS 17 71 ? ? ? D . n D 1 18 LEU 18 72 ? ? ? D . n D 1 19 LYS 19 73 ? ? ? D . n D 1 20 HIS 20 74 ? ? ? D . n D 1 21 ASP 21 75 ? ? ? D . n D 1 22 ASN 22 76 ? ? ? D . n D 1 23 ALA 23 77 ? ? ? D . n D 1 24 SER 24 78 78 SER SER D . n D 1 25 ARG 25 79 79 ARG ARG D . n D 1 26 ALA 26 80 80 ALA ALA D . n D 1 27 LEU 27 81 81 LEU LEU D . n D 1 28 ALA 28 82 82 ALA ALA D . n D 1 29 LEU 29 83 83 LEU LEU D . n D 1 30 PHE 30 84 84 PHE PHE D . n D 1 31 GLU 31 85 85 GLU GLU D . n D 1 32 GLU 32 86 86 GLU GLU D . n D 1 33 LEU 33 87 87 LEU LEU D . n D 1 34 VAL 34 88 88 VAL VAL D . n D 1 35 GLU 35 89 89 GLU GLU D . n D 1 36 THR 36 90 90 THR THR D . n D 1 37 ASP 37 91 91 ASP ASP D . n D 1 38 PRO 38 92 92 PRO PRO D . n D 1 39 ASP 39 93 93 ASP ASP D . n D 1 40 TYR 40 94 94 TYR TYR D . n D 1 41 VAL 41 95 95 VAL VAL D . n D 1 42 GLY 42 96 96 GLY GLY D . n D 1 43 THR 43 97 97 THR THR D . n D 1 44 TYR 44 98 98 TYR TYR D . n D 1 45 TYR 45 99 99 TYR TYR D . n D 1 46 HIS 46 100 100 HIS HIS D . n D 1 47 LEU 47 101 101 LEU LEU D . n D 1 48 GLY 48 102 102 GLY GLY D . n D 1 49 LYS 49 103 103 LYS LYS D . n D 1 50 LEU 50 104 104 LEU LEU D . n D 1 51 TYR 51 105 105 TYR TYR D . n D 1 52 GLU 52 106 106 GLU GLU D . n D 1 53 ARG 53 107 107 ARG ARG D . n D 1 54 LEU 54 108 108 LEU LEU D . n D 1 55 ASP 55 109 109 ASP ASP D . n D 1 56 ARG 56 110 110 ARG ARG D . n D 1 57 THR 57 111 111 THR THR D . n D 1 58 ASP 58 112 112 ASP ASP D . n D 1 59 ASP 59 113 113 ASP ASP D . n D 1 60 ALA 60 114 114 ALA ALA D . n D 1 61 ILE 61 115 115 ILE ILE D . n D 1 62 ASP 62 116 116 ASP ASP D . n D 1 63 THR 63 117 117 THR THR D . n D 1 64 TYR 64 118 118 TYR ALA D . n D 1 65 ALA 65 119 119 ALA ALA D . n D 1 66 GLN 66 120 120 GLN GLN D . n D 1 67 GLY 67 121 121 GLY GLY D . n D 1 68 ILE 68 122 122 ILE ILE D . n D 1 69 GLU 69 123 123 GLU GLU D . n D 1 70 VAL 70 124 124 VAL VAL D . n D 1 71 ALA 71 125 125 ALA ALA D . n D 1 72 ARG 72 126 126 ARG ARG D . n D 1 73 GLU 73 127 127 GLU GLU D . n D 1 74 GLU 74 128 128 GLU GLU D . n D 1 75 GLY 75 129 129 GLY GLY D . n D 1 76 THR 76 130 130 THR THR D . n D 1 77 GLN 77 131 131 GLN GLN D . n D 1 78 LYS 78 132 132 LYS LYS D . n D 1 79 ASP 79 133 133 ASP ASP D . n D 1 80 LEU 80 134 134 LEU LEU D . n D 1 81 SER 81 135 135 SER SER D . n D 1 82 GLU 82 136 136 GLU GLU D . n D 1 83 LEU 83 137 137 LEU LEU D . n D 1 84 GLN 84 138 138 GLN GLN D . n D 1 85 ASP 85 139 139 ASP ASP D . n D 1 86 ALA 86 140 140 ALA ALA D . n D 1 87 LYS 87 141 141 LYS LYS D . n D 1 88 LEU 88 142 142 LEU LEU D . n D 1 89 LYS 89 143 143 LYS LYS D . n D 1 90 ALA 90 144 144 ALA ALA D . n D 1 91 GLU 91 145 145 GLU GLU D . n D 1 92 GLY 92 146 ? ? ? D . n D 1 93 LEU 93 147 ? ? ? D . n D 1 94 GLU 94 148 ? ? ? D . n D 1 95 HIS 95 149 ? ? ? D . n D 1 96 HIS 96 150 ? ? ? D . n D 1 97 HIS 97 151 ? ? ? D . n D 1 98 HIS 98 152 ? ? ? D . n D 1 99 HIS 99 153 ? ? ? D . n D 1 100 HIS 100 154 ? ? ? D . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HOH 1 201 201 HOH WAT A . E 2 HOH 2 207 207 HOH WAT A . E 2 HOH 3 208 208 HOH WAT A . F 2 HOH 1 204 204 HOH WAT B . G 2 HOH 1 202 202 HOH WAT C . G 2 HOH 2 203 203 HOH WAT C . G 2 HOH 3 205 205 HOH WAT C . H 2 HOH 1 209 209 HOH WAT D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA monomeric 1 2 software_defined_assembly PISA monomeric 1 3 software_defined_assembly PISA monomeric 1 4 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,E 2 1 B,F 3 1 C,G 4 1 D,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-04-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 BALBES phasing . ? 2 PHENIX refinement '(phenix.refine: 1.5_2)' ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C B ASP 60 ? ? N B PRO 61 ? ? CA B PRO 61 ? ? 128.73 119.30 9.43 1.50 Y 2 1 C B ASP 60 ? ? N B PRO 61 ? ? CD B PRO 61 ? ? 114.62 128.40 -13.78 2.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 76 ? ? -102.63 67.17 2 1 ARG A 110 ? ? -104.59 50.78 3 1 LEU B 87 ? ? -39.52 -31.42 4 1 ARG B 110 ? ? -112.29 53.10 5 1 ARG B 126 ? ? -69.06 14.21 6 1 GLU B 127 ? ? -124.88 -66.04 7 1 LEU C 81 ? ? -39.30 -39.48 8 1 ASP C 109 ? ? 41.32 24.42 9 1 ARG C 110 ? ? -102.38 51.89 10 1 LEU C 147 ? ? -57.42 5.77 11 1 ASP D 91 ? ? -150.44 71.49 12 1 ASP D 93 ? ? -77.78 27.81 13 1 TYR D 99 ? ? -104.40 -63.18 14 1 ASP D 109 ? ? 71.99 -1.48 15 1 ILE D 115 ? ? -53.05 -71.24 16 1 GLU D 127 ? ? -81.86 -79.76 17 1 LYS D 132 ? ? -38.94 -26.53 18 1 SER D 135 ? ? -52.88 -70.88 19 1 GLU D 136 ? ? -38.29 -38.47 20 1 ALA D 144 ? ? -70.43 -71.84 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 59 ? CG ? A GLU 5 CG 2 1 Y 1 A GLU 59 ? CD ? A GLU 5 CD 3 1 Y 1 A GLU 59 ? OE1 ? A GLU 5 OE1 4 1 Y 1 A GLU 59 ? OE2 ? A GLU 5 OE2 5 1 Y 1 B GLU 59 ? CG ? B GLU 5 CG 6 1 Y 1 B GLU 59 ? CD ? B GLU 5 CD 7 1 Y 1 B GLU 59 ? OE1 ? B GLU 5 OE1 8 1 Y 1 B GLU 59 ? OE2 ? B GLU 5 OE2 9 1 Y 1 D TYR 118 ? CG ? D TYR 64 CG 10 1 Y 1 D TYR 118 ? CD1 ? D TYR 64 CD1 11 1 Y 1 D TYR 118 ? CD2 ? D TYR 64 CD2 12 1 Y 1 D TYR 118 ? CE1 ? D TYR 64 CE1 13 1 Y 1 D TYR 118 ? CE2 ? D TYR 64 CE2 14 1 Y 1 D TYR 118 ? CZ ? D TYR 64 CZ 15 1 Y 1 D TYR 118 ? OH ? D TYR 64 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 55 ? A MET 1 2 1 Y 1 A GLU 56 ? A GLU 2 3 1 Y 1 A ASP 57 ? A ASP 3 4 1 Y 1 A PRO 58 ? A PRO 4 5 1 Y 1 A HIS 149 ? A HIS 95 6 1 Y 1 A HIS 150 ? A HIS 96 7 1 Y 1 A HIS 151 ? A HIS 97 8 1 Y 1 A HIS 152 ? A HIS 98 9 1 Y 1 A HIS 153 ? A HIS 99 10 1 Y 1 A HIS 154 ? A HIS 100 11 1 Y 1 B MET 55 ? B MET 1 12 1 Y 1 B GLU 56 ? B GLU 2 13 1 Y 1 B ASP 57 ? B ASP 3 14 1 Y 1 B PRO 58 ? B PRO 4 15 1 Y 1 B HIS 149 ? B HIS 95 16 1 Y 1 B HIS 150 ? B HIS 96 17 1 Y 1 B HIS 151 ? B HIS 97 18 1 Y 1 B HIS 152 ? B HIS 98 19 1 Y 1 B HIS 153 ? B HIS 99 20 1 Y 1 B HIS 154 ? B HIS 100 21 1 Y 1 C MET 55 ? C MET 1 22 1 Y 1 C GLU 56 ? C GLU 2 23 1 Y 1 C ASP 57 ? C ASP 3 24 1 Y 1 C PRO 58 ? C PRO 4 25 1 Y 1 C GLU 59 ? C GLU 5 26 1 Y 1 C HIS 149 ? C HIS 95 27 1 Y 1 C HIS 150 ? C HIS 96 28 1 Y 1 C HIS 151 ? C HIS 97 29 1 Y 1 C HIS 152 ? C HIS 98 30 1 Y 1 C HIS 153 ? C HIS 99 31 1 Y 1 C HIS 154 ? C HIS 100 32 1 Y 1 D MET 55 ? D MET 1 33 1 Y 1 D GLU 56 ? D GLU 2 34 1 Y 1 D ASP 57 ? D ASP 3 35 1 Y 1 D PRO 58 ? D PRO 4 36 1 Y 1 D GLU 59 ? D GLU 5 37 1 Y 1 D ASP 60 ? D ASP 6 38 1 Y 1 D PRO 61 ? D PRO 7 39 1 Y 1 D PHE 62 ? D PHE 8 40 1 Y 1 D THR 63 ? D THR 9 41 1 Y 1 D ARG 64 ? D ARG 10 42 1 Y 1 D TYR 65 ? D TYR 11 43 1 Y 1 D ALA 66 ? D ALA 12 44 1 Y 1 D LEU 67 ? D LEU 13 45 1 Y 1 D ALA 68 ? D ALA 14 46 1 Y 1 D GLN 69 ? D GLN 15 47 1 Y 1 D GLU 70 ? D GLU 16 48 1 Y 1 D HIS 71 ? D HIS 17 49 1 Y 1 D LEU 72 ? D LEU 18 50 1 Y 1 D LYS 73 ? D LYS 19 51 1 Y 1 D HIS 74 ? D HIS 20 52 1 Y 1 D ASP 75 ? D ASP 21 53 1 Y 1 D ASN 76 ? D ASN 22 54 1 Y 1 D ALA 77 ? D ALA 23 55 1 Y 1 D GLY 146 ? D GLY 92 56 1 Y 1 D LEU 147 ? D LEU 93 57 1 Y 1 D GLU 148 ? D GLU 94 58 1 Y 1 D HIS 149 ? D HIS 95 59 1 Y 1 D HIS 150 ? D HIS 96 60 1 Y 1 D HIS 151 ? D HIS 97 61 1 Y 1 D HIS 152 ? D HIS 98 62 1 Y 1 D HIS 153 ? D HIS 99 63 1 Y 1 D HIS 154 ? D HIS 100 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TYR N N N N 307 TYR CA C N S 308 TYR C C N N 309 TYR O O N N 310 TYR CB C N N 311 TYR CG C Y N 312 TYR CD1 C Y N 313 TYR CD2 C Y N 314 TYR CE1 C Y N 315 TYR CE2 C Y N 316 TYR CZ C Y N 317 TYR OH O N N 318 TYR OXT O N N 319 TYR H H N N 320 TYR H2 H N N 321 TYR HA H N N 322 TYR HB2 H N N 323 TYR HB3 H N N 324 TYR HD1 H N N 325 TYR HD2 H N N 326 TYR HE1 H N N 327 TYR HE2 H N N 328 TYR HH H N N 329 TYR HXT H N N 330 VAL N N N N 331 VAL CA C N S 332 VAL C C N N 333 VAL O O N N 334 VAL CB C N N 335 VAL CG1 C N N 336 VAL CG2 C N N 337 VAL OXT O N N 338 VAL H H N N 339 VAL H2 H N N 340 VAL HA H N N 341 VAL HB H N N 342 VAL HG11 H N N 343 VAL HG12 H N N 344 VAL HG13 H N N 345 VAL HG21 H N N 346 VAL HG22 H N N 347 VAL HG23 H N N 348 VAL HXT H N N 349 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2KCL _pdbx_initial_refinement_model.details 'PDB ENTRY 2KCL' #