data_3MQQ # _entry.id 3MQQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3MQQ RCSB RCSB058881 WWPDB D_1000058881 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3MQO 'Structure in complex with ethanol' unspecified TargetDB APC67393.1 . unspecified # _pdbx_database_status.entry_id 3MQQ _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-04-28 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stein, A.J.' 1 'Tesar, C.' 2 'Buck, K.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title ;The Crystal Structure of the PAS domain in complex with Ethanol of a Transcriptional Regulator in the LuxR family from Burkholderia thailandensis to 1.65A ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Stein, A.J.' 1 primary 'Tesar, C.' 2 primary 'Buck, K.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 3MQQ _cell.length_a 57.438 _cell.length_b 35.726 _cell.length_c 66.986 _cell.angle_alpha 90.000 _cell.angle_beta 91.490 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.Int_Tables_number 3 _symmetry.entry_id 3MQQ _symmetry.space_group_name_H-M 'P 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator, LuxR family' 13481.028 2 ? ? 'sequence database residues 2-121' ? 2 non-polymer syn ETHANOL 46.068 4 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 5 water nat water 18.015 68 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;PAIDYKTAFHLAPIGLVLSRDRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPV(MSE)IAHGSYAD DRI(MSE)KRAGGELFWCHVTGRALDRTAPLAAGVWTFEDLSATRRVA ; _entity_poly.pdbx_seq_one_letter_code_can ;PAIDYKTAFHLAPIGLVLSRDRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRIM KRAGGELFWCHVTGRALDRTAPLAAGVWTFEDLSATRRVA ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC67393.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 ALA n 1 3 ILE n 1 4 ASP n 1 5 TYR n 1 6 LYS n 1 7 THR n 1 8 ALA n 1 9 PHE n 1 10 HIS n 1 11 LEU n 1 12 ALA n 1 13 PRO n 1 14 ILE n 1 15 GLY n 1 16 LEU n 1 17 VAL n 1 18 LEU n 1 19 SER n 1 20 ARG n 1 21 ASP n 1 22 ARG n 1 23 VAL n 1 24 ILE n 1 25 GLU n 1 26 ASP n 1 27 CYS n 1 28 ASN n 1 29 ASP n 1 30 GLU n 1 31 LEU n 1 32 ALA n 1 33 ALA n 1 34 ILE n 1 35 PHE n 1 36 ARG n 1 37 CYS n 1 38 ALA n 1 39 ARG n 1 40 ALA n 1 41 ASP n 1 42 LEU n 1 43 ILE n 1 44 GLY n 1 45 ARG n 1 46 SER n 1 47 PHE n 1 48 GLU n 1 49 VAL n 1 50 LEU n 1 51 TYR n 1 52 PRO n 1 53 SER n 1 54 SER n 1 55 ASP n 1 56 GLU n 1 57 PHE n 1 58 GLU n 1 59 ARG n 1 60 ILE n 1 61 GLY n 1 62 GLU n 1 63 ARG n 1 64 ILE n 1 65 SER n 1 66 PRO n 1 67 VAL n 1 68 MSE n 1 69 ILE n 1 70 ALA n 1 71 HIS n 1 72 GLY n 1 73 SER n 1 74 TYR n 1 75 ALA n 1 76 ASP n 1 77 ASP n 1 78 ARG n 1 79 ILE n 1 80 MSE n 1 81 LYS n 1 82 ARG n 1 83 ALA n 1 84 GLY n 1 85 GLY n 1 86 GLU n 1 87 LEU n 1 88 PHE n 1 89 TRP n 1 90 CYS n 1 91 HIS n 1 92 VAL n 1 93 THR n 1 94 GLY n 1 95 ARG n 1 96 ALA n 1 97 LEU n 1 98 ASP n 1 99 ARG n 1 100 THR n 1 101 ALA n 1 102 PRO n 1 103 LEU n 1 104 ALA n 1 105 ALA n 1 106 GLY n 1 107 VAL n 1 108 TRP n 1 109 THR n 1 110 PHE n 1 111 GLU n 1 112 ASP n 1 113 LEU n 1 114 SER n 1 115 ALA n 1 116 THR n 1 117 ARG n 1 118 ARG n 1 119 VAL n 1 120 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BTH_I2609 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain E264 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details pMCSG7 _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Burkholderia thailandensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 271848 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2SVC5_BURTA _struct_ref.pdbx_db_accession Q2SVC5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PAIDYKTAFHLAPIGLVLSRDRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRIM KRAGGELFWCHVTGRALDRTAPLAAGVWTFEDLSATRRVA ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MQQ A 1 ? 120 ? Q2SVC5 2 ? 121 ? 2 121 2 1 3MQQ B 1 ? 120 ? Q2SVC5 2 ? 121 ? 2 121 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 EOH non-polymer . ETHANOL ? 'C2 H6 O' 46.068 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3MQQ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 56.7 _exptl_crystal.density_Matthews 2.60 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '30% ethanol, 20% PEG 4000, 0.1M Sodium citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-04-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 0.9794 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3MQQ _reflns.d_resolution_high 1.650 _reflns.d_resolution_low 50.000 _reflns.number_obs 32890 _reflns.pdbx_Rmerge_I_obs 0.085 _reflns.pdbx_netI_over_sigmaI 8.800 _reflns.pdbx_chi_squared 2.372 _reflns.pdbx_redundancy 3.700 _reflns.percent_possible_obs 99.200 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.65 1.71 ? ? ? 0.627 ? ? 0.931 3.70 ? 3244 99.00 1 1 1.71 1.78 ? ? ? 0.455 ? ? 0.959 3.70 ? 3250 99.00 2 1 1.78 1.86 ? ? ? 0.297 ? ? 1.025 3.70 ? 3270 99.30 3 1 1.86 1.96 ? ? ? 0.211 ? ? 1.207 3.70 ? 3248 99.50 4 1 1.96 2.08 ? ? ? 0.147 ? ? 1.441 3.70 ? 3292 99.50 5 1 2.08 2.24 ? ? ? 0.113 ? ? 1.832 3.70 ? 3320 99.70 6 1 2.24 2.46 ? ? ? 0.097 ? ? 2.334 3.70 ? 3270 99.90 7 1 2.46 2.82 ? ? ? 0.092 ? ? 3.381 3.70 ? 3332 100.00 8 1 2.82 3.55 ? ? ? 0.074 ? ? 4.248 3.60 ? 3341 99.70 9 1 3.55 50.00 ? ? ? 0.072 ? ? 6.664 3.50 ? 3323 96.50 10 1 # _refine.entry_id 3MQQ _refine.ls_d_res_high 1.650 _refine.ls_d_res_low 33.480 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.810 _refine.ls_number_reflns_obs 32814 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED ; _refine.ls_R_factor_obs 0.225 _refine.ls_R_factor_R_work 0.224 _refine.ls_R_factor_R_free 0.257 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1667 _refine.B_iso_mean 29.769 _refine.aniso_B[1][1] -0.210 _refine.aniso_B[2][2] 0.300 _refine.aniso_B[3][3] -0.080 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.160 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.pdbx_overall_ESU_R_Free 0.107 _refine.overall_SU_ML 0.078 _refine.overall_SU_B 4.915 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1801 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 1895 _refine_hist.d_res_high 1.650 _refine_hist.d_res_low 33.480 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1887 0.012 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2553 1.318 1.954 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 241 5.942 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 88 25.869 21.591 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 301 12.262 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23 22.779 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 284 0.101 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1443 0.007 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1167 0.600 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1869 0.940 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 720 1.984 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 678 2.740 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.649 _refine_ls_shell.d_res_low 1.692 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.390 _refine_ls_shell.number_reflns_R_work 2238 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.296 _refine_ls_shell.R_factor_R_free 0.325 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 114 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2352 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3MQQ _struct.title ;The Crystal Structure of the PAS domain in complex with Ethanol of a Transcriptional Regulator in the LuxR family from Burkholderia thailandensis to 1.65A ; _struct.pdbx_descriptor 'Transcriptional regulator, LuxR family' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MQQ _struct_keywords.pdbx_keywords 'Transcription regulator' _struct_keywords.text ;PAS domain, LuxR, regulator, PSI, MCSG, Structural Genomics, Midwest Center for Structural Genomics, Protein Structure Initiative, Transcription regulator ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 4 ? L N N 5 ? M N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 4 ? ALA A 12 ? ASP A 5 ALA A 13 1 ? 9 HELX_P HELX_P2 2 ASN A 28 ? PHE A 35 ? ASN A 29 PHE A 36 1 ? 8 HELX_P HELX_P3 3 ALA A 38 ? ILE A 43 ? ALA A 39 ILE A 44 1 ? 6 HELX_P HELX_P4 4 SER A 46 ? TYR A 51 ? SER A 47 TYR A 52 5 ? 6 HELX_P HELX_P5 5 SER A 53 ? GLY A 72 ? SER A 54 GLY A 73 1 ? 20 HELX_P HELX_P6 6 ASP B 4 ? ALA B 12 ? ASP B 5 ALA B 13 1 ? 9 HELX_P HELX_P7 7 ASN B 28 ? PHE B 35 ? ASN B 29 PHE B 36 1 ? 8 HELX_P HELX_P8 8 ALA B 38 ? ILE B 43 ? ALA B 39 ILE B 44 1 ? 6 HELX_P HELX_P9 9 SER B 46 ? TYR B 51 ? SER B 47 TYR B 52 5 ? 6 HELX_P HELX_P10 10 SER B 53 ? GLY B 72 ? SER B 54 GLY B 73 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A VAL 67 C ? ? ? 1_555 A MSE 68 N ? ? A VAL 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 68 C ? ? ? 1_555 A ILE 69 N ? ? A MSE 69 A ILE 70 1_555 ? ? ? ? ? ? ? 1.338 ? covale3 covale ? ? A ILE 79 C ? ? ? 1_555 A MSE 80 N ? ? A ILE 80 A MSE 81 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 80 C ? ? ? 1_555 A LYS 81 N ? ? A MSE 81 A LYS 82 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? B VAL 67 C ? ? ? 1_555 B MSE 68 N ? ? B VAL 68 B MSE 69 1_555 ? ? ? ? ? ? ? 1.336 ? covale6 covale ? ? B MSE 68 C ? ? ? 1_555 B ILE 69 N ? ? B MSE 69 B ILE 70 1_555 ? ? ? ? ? ? ? 1.332 ? covale7 covale ? ? B ILE 79 C ? ? ? 1_555 B MSE 80 N ? ? B ILE 80 B MSE 81 1_555 ? ? ? ? ? ? ? 1.334 ? covale8 covale ? ? B MSE 80 C ? ? ? 1_555 B LYS 81 N ? ? B MSE 81 B LYS 82 1_555 ? ? ? ? ? ? ? 1.327 ? metalc1 metalc ? ? A SER 19 OG ? ? ? 1_555 G NA . NA ? ? A SER 20 A NA 125 1_555 ? ? ? ? ? ? ? 2.612 ? metalc2 metalc ? ? B ALA 104 O ? ? ? 1_555 K NA . NA ? ? B ALA 105 B NA 1 1_555 ? ? ? ? ? ? ? 2.667 ? metalc3 metalc ? ? B SER 19 OG ? ? ? 1_555 K NA . NA ? ? B SER 20 B NA 1 1_555 ? ? ? ? ? ? ? 2.748 ? metalc4 metalc ? ? B LEU 103 O ? ? ? 1_555 K NA . NA ? ? B LEU 104 B NA 1 1_555 ? ? ? ? ? ? ? 2.919 ? metalc5 metalc ? ? A ALA 104 O ? ? ? 1_555 G NA . NA ? ? A ALA 105 A NA 125 1_555 ? ? ? ? ? ? ? 2.929 ? metalc6 metalc ? ? A LEU 103 O ? ? ? 1_555 G NA . NA ? ? A LEU 104 A NA 125 1_555 ? ? ? ? ? ? ? 2.984 ? metalc7 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 125 A HOH 135 1_555 ? ? ? ? ? ? ? 2.664 ? metalc8 metalc ? ? K NA . NA ? ? ? 1_555 M HOH . O ? ? B NA 1 B HOH 146 1_555 ? ? ? ? ? ? ? 2.699 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 23 ? CYS A 27 ? VAL A 24 CYS A 28 A 2 GLY A 15 ? ARG A 20 ? GLY A 16 ARG A 21 A 3 GLY A 106 ? ASP A 112 ? GLY A 107 ASP A 113 A 4 LEU A 87 ? ALA A 96 ? LEU A 88 ALA A 97 A 5 TYR A 74 ? LYS A 81 ? TYR A 75 LYS A 82 B 1 VAL B 23 ? CYS B 27 ? VAL B 24 CYS B 28 B 2 GLY B 15 ? ARG B 20 ? GLY B 16 ARG B 21 B 3 GLY B 106 ? ASP B 112 ? GLY B 107 ASP B 113 B 4 LEU B 87 ? ALA B 96 ? LEU B 88 ALA B 97 B 5 TYR B 74 ? LYS B 81 ? TYR B 75 LYS B 82 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 25 ? O GLU A 26 N LEU A 18 ? N LEU A 19 A 2 3 N SER A 19 ? N SER A 20 O GLY A 106 ? O GLY A 107 A 3 4 O GLU A 111 ? O GLU A 112 N HIS A 91 ? N HIS A 92 A 4 5 O PHE A 88 ? O PHE A 89 N MSE A 80 ? N MSE A 81 B 1 2 O GLU B 25 ? O GLU B 26 N LEU B 18 ? N LEU B 19 B 2 3 N SER B 19 ? N SER B 20 O GLY B 106 ? O GLY B 107 B 3 4 O THR B 109 ? O THR B 110 N THR B 93 ? N THR B 94 B 4 5 O PHE B 88 ? O PHE B 89 N MSE B 80 ? N MSE B 81 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EOH A 1' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EOH A 122' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE EDO A 123' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 124' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 125' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EOH B 122' AC7 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EOH B 123' AC8 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE EDO B 124' AC9 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA B 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ARG A 22 ? ARG A 23 . ? 1_555 ? 2 AC1 4 PHE A 47 ? PHE A 48 . ? 1_555 ? 3 AC1 4 TYR A 51 ? TYR A 52 . ? 1_555 ? 4 AC1 4 HOH L . ? HOH A 135 . ? 1_555 ? 5 AC2 5 HIS A 71 ? HIS A 72 . ? 1_555 ? 6 AC2 5 SER A 73 ? SER A 74 . ? 1_555 ? 7 AC2 5 TYR A 74 ? TYR A 75 . ? 1_555 ? 8 AC2 5 ALA A 75 ? ALA A 76 . ? 1_555 ? 9 AC2 5 ARG B 118 ? ARG B 119 . ? 1_555 ? 10 AC3 2 SER A 53 ? SER A 54 . ? 1_555 ? 11 AC3 2 SER A 54 ? SER A 55 . ? 1_555 ? 12 AC4 4 GLU A 25 ? GLU A 26 . ? 1_555 ? 13 AC4 4 ASP A 26 ? ASP A 27 . ? 1_555 ? 14 AC4 4 ILE B 3 ? ILE B 4 . ? 1_555 ? 15 AC4 4 TYR B 5 ? TYR B 6 . ? 1_555 ? 16 AC5 6 SER A 19 ? SER A 20 . ? 1_555 ? 17 AC5 6 ASP A 21 ? ASP A 22 . ? 1_555 ? 18 AC5 6 ARG A 22 ? ARG A 23 . ? 1_555 ? 19 AC5 6 LEU A 103 ? LEU A 104 . ? 1_555 ? 20 AC5 6 ALA A 104 ? ALA A 105 . ? 1_555 ? 21 AC5 6 HOH L . ? HOH A 135 . ? 1_555 ? 22 AC6 4 ARG B 22 ? ARG B 23 . ? 1_555 ? 23 AC6 4 PHE B 47 ? PHE B 48 . ? 1_555 ? 24 AC6 4 TYR B 51 ? TYR B 52 . ? 1_555 ? 25 AC6 4 HOH M . ? HOH B 146 . ? 1_555 ? 26 AC7 5 GLU B 30 ? GLU B 31 . ? 1_555 ? 27 AC7 5 ALA B 33 ? ALA B 34 . ? 1_555 ? 28 AC7 5 ILE B 34 ? ILE B 35 . ? 1_555 ? 29 AC7 5 ARG B 36 ? ARG B 37 . ? 1_555 ? 30 AC7 5 ASP B 112 ? ASP B 113 . ? 1_555 ? 31 AC8 1 SER B 54 ? SER B 55 . ? 1_555 ? 32 AC9 6 SER B 19 ? SER B 20 . ? 1_555 ? 33 AC9 6 ASP B 21 ? ASP B 22 . ? 1_555 ? 34 AC9 6 ARG B 22 ? ARG B 23 . ? 1_555 ? 35 AC9 6 LEU B 103 ? LEU B 104 . ? 1_555 ? 36 AC9 6 ALA B 104 ? ALA B 105 . ? 1_555 ? 37 AC9 6 HOH M . ? HOH B 146 . ? 1_555 ? # _atom_sites.entry_id 3MQQ _atom_sites.fract_transf_matrix[1][1] 0.017410 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000452 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027991 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014934 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 2 ? ? ? A . n A 1 2 ALA 2 3 ? ? ? A . n A 1 3 ILE 3 4 4 ILE ILE A . n A 1 4 ASP 4 5 5 ASP ASP A . n A 1 5 TYR 5 6 6 TYR TYR A . n A 1 6 LYS 6 7 7 LYS LYS A . n A 1 7 THR 7 8 8 THR THR A . n A 1 8 ALA 8 9 9 ALA ALA A . n A 1 9 PHE 9 10 10 PHE PHE A . n A 1 10 HIS 10 11 11 HIS HIS A . n A 1 11 LEU 11 12 12 LEU LEU A . n A 1 12 ALA 12 13 13 ALA ALA A . n A 1 13 PRO 13 14 14 PRO PRO A . n A 1 14 ILE 14 15 15 ILE ILE A . n A 1 15 GLY 15 16 16 GLY GLY A . n A 1 16 LEU 16 17 17 LEU LEU A . n A 1 17 VAL 17 18 18 VAL VAL A . n A 1 18 LEU 18 19 19 LEU LEU A . n A 1 19 SER 19 20 20 SER SER A . n A 1 20 ARG 20 21 21 ARG ARG A . n A 1 21 ASP 21 22 22 ASP ASP A . n A 1 22 ARG 22 23 23 ARG ARG A . n A 1 23 VAL 23 24 24 VAL VAL A . n A 1 24 ILE 24 25 25 ILE ILE A . n A 1 25 GLU 25 26 26 GLU GLU A . n A 1 26 ASP 26 27 27 ASP ASP A . n A 1 27 CYS 27 28 28 CYS CYS A . n A 1 28 ASN 28 29 29 ASN ASN A . n A 1 29 ASP 29 30 30 ASP ASP A . n A 1 30 GLU 30 31 31 GLU GLU A . n A 1 31 LEU 31 32 32 LEU LEU A . n A 1 32 ALA 32 33 33 ALA ALA A . n A 1 33 ALA 33 34 34 ALA ALA A . n A 1 34 ILE 34 35 35 ILE ILE A . n A 1 35 PHE 35 36 36 PHE PHE A . n A 1 36 ARG 36 37 37 ARG ARG A . n A 1 37 CYS 37 38 38 CYS CYS A . n A 1 38 ALA 38 39 39 ALA ALA A . n A 1 39 ARG 39 40 40 ARG ARG A . n A 1 40 ALA 40 41 41 ALA ALA A . n A 1 41 ASP 41 42 42 ASP ASP A . n A 1 42 LEU 42 43 43 LEU LEU A . n A 1 43 ILE 43 44 44 ILE ILE A . n A 1 44 GLY 44 45 45 GLY GLY A . n A 1 45 ARG 45 46 46 ARG ARG A . n A 1 46 SER 46 47 47 SER SER A . n A 1 47 PHE 47 48 48 PHE PHE A . n A 1 48 GLU 48 49 49 GLU GLU A . n A 1 49 VAL 49 50 50 VAL VAL A . n A 1 50 LEU 50 51 51 LEU LEU A . n A 1 51 TYR 51 52 52 TYR TYR A . n A 1 52 PRO 52 53 53 PRO PRO A . n A 1 53 SER 53 54 54 SER SER A . n A 1 54 SER 54 55 55 SER SER A . n A 1 55 ASP 55 56 56 ASP ASP A . n A 1 56 GLU 56 57 57 GLU GLU A . n A 1 57 PHE 57 58 58 PHE PHE A . n A 1 58 GLU 58 59 59 GLU GLU A . n A 1 59 ARG 59 60 60 ARG ARG A . n A 1 60 ILE 60 61 61 ILE ILE A . n A 1 61 GLY 61 62 62 GLY GLY A . n A 1 62 GLU 62 63 63 GLU GLU A . n A 1 63 ARG 63 64 64 ARG ARG A . n A 1 64 ILE 64 65 65 ILE ILE A . n A 1 65 SER 65 66 66 SER SER A . n A 1 66 PRO 66 67 67 PRO PRO A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 MSE 68 69 69 MSE MSE A . n A 1 69 ILE 69 70 70 ILE ILE A . n A 1 70 ALA 70 71 71 ALA ALA A . n A 1 71 HIS 71 72 72 HIS HIS A . n A 1 72 GLY 72 73 73 GLY GLY A . n A 1 73 SER 73 74 74 SER SER A . n A 1 74 TYR 74 75 75 TYR TYR A . n A 1 75 ALA 75 76 76 ALA ALA A . n A 1 76 ASP 76 77 77 ASP ASP A . n A 1 77 ASP 77 78 78 ASP ASP A . n A 1 78 ARG 78 79 79 ARG ARG A . n A 1 79 ILE 79 80 80 ILE ILE A . n A 1 80 MSE 80 81 81 MSE MSE A . n A 1 81 LYS 81 82 82 LYS LYS A . n A 1 82 ARG 82 83 83 ARG ARG A . n A 1 83 ALA 83 84 84 ALA ALA A . n A 1 84 GLY 84 85 85 GLY GLY A . n A 1 85 GLY 85 86 86 GLY GLY A . n A 1 86 GLU 86 87 87 GLU GLU A . n A 1 87 LEU 87 88 88 LEU LEU A . n A 1 88 PHE 88 89 89 PHE PHE A . n A 1 89 TRP 89 90 90 TRP TRP A . n A 1 90 CYS 90 91 91 CYS CYS A . n A 1 91 HIS 91 92 92 HIS HIS A . n A 1 92 VAL 92 93 93 VAL VAL A . n A 1 93 THR 93 94 94 THR THR A . n A 1 94 GLY 94 95 95 GLY GLY A . n A 1 95 ARG 95 96 96 ARG ARG A . n A 1 96 ALA 96 97 97 ALA ALA A . n A 1 97 LEU 97 98 98 LEU LEU A . n A 1 98 ASP 98 99 99 ASP ASP A . n A 1 99 ARG 99 100 100 ARG ARG A . n A 1 100 THR 100 101 101 THR THR A . n A 1 101 ALA 101 102 102 ALA ALA A . n A 1 102 PRO 102 103 103 PRO PRO A . n A 1 103 LEU 103 104 104 LEU LEU A . n A 1 104 ALA 104 105 105 ALA ALA A . n A 1 105 ALA 105 106 106 ALA ALA A . n A 1 106 GLY 106 107 107 GLY GLY A . n A 1 107 VAL 107 108 108 VAL VAL A . n A 1 108 TRP 108 109 109 TRP TRP A . n A 1 109 THR 109 110 110 THR THR A . n A 1 110 PHE 110 111 111 PHE PHE A . n A 1 111 GLU 111 112 112 GLU GLU A . n A 1 112 ASP 112 113 113 ASP ASP A . n A 1 113 LEU 113 114 114 LEU LEU A . n A 1 114 SER 114 115 115 SER SER A . n A 1 115 ALA 115 116 116 ALA ALA A . n A 1 116 THR 116 117 ? ? ? A . n A 1 117 ARG 117 118 ? ? ? A . n A 1 118 ARG 118 119 ? ? ? A . n A 1 119 VAL 119 120 ? ? ? A . n A 1 120 ALA 120 121 ? ? ? A . n B 1 1 PRO 1 2 ? ? ? B . n B 1 2 ALA 2 3 ? ? ? B . n B 1 3 ILE 3 4 4 ILE ILE B . n B 1 4 ASP 4 5 5 ASP ASP B . n B 1 5 TYR 5 6 6 TYR TYR B . n B 1 6 LYS 6 7 7 LYS LYS B . n B 1 7 THR 7 8 8 THR THR B . n B 1 8 ALA 8 9 9 ALA ALA B . n B 1 9 PHE 9 10 10 PHE PHE B . n B 1 10 HIS 10 11 11 HIS HIS B . n B 1 11 LEU 11 12 12 LEU LEU B . n B 1 12 ALA 12 13 13 ALA ALA B . n B 1 13 PRO 13 14 14 PRO PRO B . n B 1 14 ILE 14 15 15 ILE ILE B . n B 1 15 GLY 15 16 16 GLY GLY B . n B 1 16 LEU 16 17 17 LEU LEU B . n B 1 17 VAL 17 18 18 VAL VAL B . n B 1 18 LEU 18 19 19 LEU LEU B . n B 1 19 SER 19 20 20 SER SER B . n B 1 20 ARG 20 21 21 ARG ARG B . n B 1 21 ASP 21 22 22 ASP ASP B . n B 1 22 ARG 22 23 23 ARG ARG B . n B 1 23 VAL 23 24 24 VAL VAL B . n B 1 24 ILE 24 25 25 ILE ILE B . n B 1 25 GLU 25 26 26 GLU GLU B . n B 1 26 ASP 26 27 27 ASP ASP B . n B 1 27 CYS 27 28 28 CYS CYS B . n B 1 28 ASN 28 29 29 ASN ASN B . n B 1 29 ASP 29 30 30 ASP ASP B . n B 1 30 GLU 30 31 31 GLU GLU B . n B 1 31 LEU 31 32 32 LEU LEU B . n B 1 32 ALA 32 33 33 ALA ALA B . n B 1 33 ALA 33 34 34 ALA ALA B . n B 1 34 ILE 34 35 35 ILE ILE B . n B 1 35 PHE 35 36 36 PHE PHE B . n B 1 36 ARG 36 37 37 ARG ARG B . n B 1 37 CYS 37 38 38 CYS CYS B . n B 1 38 ALA 38 39 39 ALA ALA B . n B 1 39 ARG 39 40 40 ARG ARG B . n B 1 40 ALA 40 41 41 ALA ALA B . n B 1 41 ASP 41 42 42 ASP ASP B . n B 1 42 LEU 42 43 43 LEU LEU B . n B 1 43 ILE 43 44 44 ILE ILE B . n B 1 44 GLY 44 45 45 GLY GLY B . n B 1 45 ARG 45 46 46 ARG ARG B . n B 1 46 SER 46 47 47 SER SER B . n B 1 47 PHE 47 48 48 PHE PHE B . n B 1 48 GLU 48 49 49 GLU GLU B . n B 1 49 VAL 49 50 50 VAL VAL B . n B 1 50 LEU 50 51 51 LEU LEU B . n B 1 51 TYR 51 52 52 TYR TYR B . n B 1 52 PRO 52 53 53 PRO PRO B . n B 1 53 SER 53 54 54 SER SER B . n B 1 54 SER 54 55 55 SER SER B . n B 1 55 ASP 55 56 56 ASP ASP B . n B 1 56 GLU 56 57 57 GLU GLU B . n B 1 57 PHE 57 58 58 PHE PHE B . n B 1 58 GLU 58 59 59 GLU GLU B . n B 1 59 ARG 59 60 60 ARG ARG B . n B 1 60 ILE 60 61 61 ILE ILE B . n B 1 61 GLY 61 62 62 GLY GLY B . n B 1 62 GLU 62 63 63 GLU GLU B . n B 1 63 ARG 63 64 64 ARG ARG B . n B 1 64 ILE 64 65 65 ILE ILE B . n B 1 65 SER 65 66 66 SER SER B . n B 1 66 PRO 66 67 67 PRO PRO B . n B 1 67 VAL 67 68 68 VAL VAL B . n B 1 68 MSE 68 69 69 MSE MSE B . n B 1 69 ILE 69 70 70 ILE ILE B . n B 1 70 ALA 70 71 71 ALA ALA B . n B 1 71 HIS 71 72 72 HIS HIS B . n B 1 72 GLY 72 73 73 GLY GLY B . n B 1 73 SER 73 74 74 SER SER B . n B 1 74 TYR 74 75 75 TYR TYR B . n B 1 75 ALA 75 76 76 ALA ALA B . n B 1 76 ASP 76 77 77 ASP ASP B . n B 1 77 ASP 77 78 78 ASP ASP B . n B 1 78 ARG 78 79 79 ARG ARG B . n B 1 79 ILE 79 80 80 ILE ILE B . n B 1 80 MSE 80 81 81 MSE MSE B . n B 1 81 LYS 81 82 82 LYS LYS B . n B 1 82 ARG 82 83 83 ARG ARG B . n B 1 83 ALA 83 84 84 ALA ALA B . n B 1 84 GLY 84 85 85 GLY GLY B . n B 1 85 GLY 85 86 86 GLY GLY B . n B 1 86 GLU 86 87 87 GLU GLU B . n B 1 87 LEU 87 88 88 LEU LEU B . n B 1 88 PHE 88 89 89 PHE PHE B . n B 1 89 TRP 89 90 90 TRP TRP B . n B 1 90 CYS 90 91 91 CYS CYS B . n B 1 91 HIS 91 92 92 HIS HIS B . n B 1 92 VAL 92 93 93 VAL VAL B . n B 1 93 THR 93 94 94 THR THR B . n B 1 94 GLY 94 95 95 GLY GLY B . n B 1 95 ARG 95 96 96 ARG ARG B . n B 1 96 ALA 96 97 97 ALA ALA B . n B 1 97 LEU 97 98 98 LEU LEU B . n B 1 98 ASP 98 99 99 ASP ASP B . n B 1 99 ARG 99 100 100 ARG ARG B . n B 1 100 THR 100 101 101 THR THR B . n B 1 101 ALA 101 102 102 ALA ALA B . n B 1 102 PRO 102 103 103 PRO PRO B . n B 1 103 LEU 103 104 104 LEU LEU B . n B 1 104 ALA 104 105 105 ALA ALA B . n B 1 105 ALA 105 106 106 ALA ALA B . n B 1 106 GLY 106 107 107 GLY GLY B . n B 1 107 VAL 107 108 108 VAL VAL B . n B 1 108 TRP 108 109 109 TRP TRP B . n B 1 109 THR 109 110 110 THR THR B . n B 1 110 PHE 110 111 111 PHE PHE B . n B 1 111 GLU 111 112 112 GLU GLU B . n B 1 112 ASP 112 113 113 ASP ASP B . n B 1 113 LEU 113 114 114 LEU LEU B . n B 1 114 SER 114 115 115 SER SER B . n B 1 115 ALA 115 116 116 ALA ALA B . n B 1 116 THR 116 117 117 THR THR B . n B 1 117 ARG 117 118 118 ARG ARG B . n B 1 118 ARG 118 119 119 ARG ARG B . n B 1 119 VAL 119 120 120 VAL VAL B . n B 1 120 ALA 120 121 121 ALA ALA B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EOH 1 1 1 EOH EOH A . D 2 EOH 1 122 4 EOH EOH A . E 3 EDO 1 123 5 EDO EDO A . F 3 EDO 1 124 7 EDO EDO A . G 4 NA 1 125 2 NA NA A . H 2 EOH 1 122 2 EOH EOH B . I 2 EOH 1 123 3 EOH EOH B . J 3 EDO 1 124 6 EDO EDO B . K 4 NA 1 1 1 NA NA B . L 5 HOH 1 126 1 HOH HOH A . L 5 HOH 2 127 4 HOH HOH A . L 5 HOH 3 128 7 HOH HOH A . L 5 HOH 4 129 9 HOH HOH A . L 5 HOH 5 130 11 HOH HOH A . L 5 HOH 6 131 12 HOH HOH A . L 5 HOH 7 132 13 HOH HOH A . L 5 HOH 8 133 18 HOH HOH A . L 5 HOH 9 134 19 HOH HOH A . L 5 HOH 10 135 21 HOH HOH A . L 5 HOH 11 136 22 HOH HOH A . L 5 HOH 12 137 25 HOH HOH A . L 5 HOH 13 138 26 HOH HOH A . L 5 HOH 14 139 28 HOH HOH A . L 5 HOH 15 140 30 HOH HOH A . L 5 HOH 16 141 32 HOH HOH A . L 5 HOH 17 142 36 HOH HOH A . L 5 HOH 18 143 40 HOH HOH A . L 5 HOH 19 144 41 HOH HOH A . L 5 HOH 20 145 43 HOH HOH A . L 5 HOH 21 146 45 HOH HOH A . L 5 HOH 22 147 50 HOH HOH A . L 5 HOH 23 148 51 HOH HOH A . L 5 HOH 24 149 52 HOH HOH A . L 5 HOH 25 150 53 HOH HOH A . L 5 HOH 26 151 54 HOH HOH A . L 5 HOH 27 152 55 HOH HOH A . L 5 HOH 28 153 61 HOH HOH A . L 5 HOH 29 154 63 HOH HOH A . L 5 HOH 30 155 64 HOH HOH A . L 5 HOH 31 156 65 HOH HOH A . L 5 HOH 32 157 66 HOH HOH A . L 5 HOH 33 158 67 HOH HOH A . M 5 HOH 1 125 2 HOH HOH B . M 5 HOH 2 126 3 HOH HOH B . M 5 HOH 3 127 5 HOH HOH B . M 5 HOH 4 128 6 HOH HOH B . M 5 HOH 5 129 8 HOH HOH B . M 5 HOH 6 130 10 HOH HOH B . M 5 HOH 7 131 14 HOH HOH B . M 5 HOH 8 132 15 HOH HOH B . M 5 HOH 9 133 16 HOH HOH B . M 5 HOH 10 134 17 HOH HOH B . M 5 HOH 11 135 20 HOH HOH B . M 5 HOH 12 136 23 HOH HOH B . M 5 HOH 13 137 24 HOH HOH B . M 5 HOH 14 138 27 HOH HOH B . M 5 HOH 15 139 29 HOH HOH B . M 5 HOH 16 140 31 HOH HOH B . M 5 HOH 17 141 33 HOH HOH B . M 5 HOH 18 142 34 HOH HOH B . M 5 HOH 19 143 35 HOH HOH B . M 5 HOH 20 144 37 HOH HOH B . M 5 HOH 21 145 38 HOH HOH B . M 5 HOH 22 146 39 HOH HOH B . M 5 HOH 23 147 42 HOH HOH B . M 5 HOH 24 148 44 HOH HOH B . M 5 HOH 25 149 46 HOH HOH B . M 5 HOH 26 150 47 HOH HOH B . M 5 HOH 27 151 48 HOH HOH B . M 5 HOH 28 152 49 HOH HOH B . M 5 HOH 29 153 56 HOH HOH B . M 5 HOH 30 154 57 HOH HOH B . M 5 HOH 31 155 58 HOH HOH B . M 5 HOH 32 156 59 HOH HOH B . M 5 HOH 33 157 60 HOH HOH B . M 5 HOH 34 158 62 HOH HOH B . M 5 HOH 35 159 68 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 68 A MSE 69 ? MET SELENOMETHIONINE 2 A MSE 80 A MSE 81 ? MET SELENOMETHIONINE 3 B MSE 68 B MSE 69 ? MET SELENOMETHIONINE 4 B MSE 80 B MSE 81 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4480 ? 1 MORE -25 ? 1 'SSA (A^2)' 10350 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 19 ? A SER 20 ? 1_555 NA ? G NA . ? A NA 125 ? 1_555 O ? A ALA 104 ? A ALA 105 ? 1_555 85.5 ? 2 OG ? A SER 19 ? A SER 20 ? 1_555 NA ? G NA . ? A NA 125 ? 1_555 O ? A LEU 103 ? A LEU 104 ? 1_555 147.4 ? 3 O ? A ALA 104 ? A ALA 105 ? 1_555 NA ? G NA . ? A NA 125 ? 1_555 O ? A LEU 103 ? A LEU 104 ? 1_555 62.0 ? 4 OG ? A SER 19 ? A SER 20 ? 1_555 NA ? G NA . ? A NA 125 ? 1_555 O ? L HOH . ? A HOH 135 ? 1_555 106.1 ? 5 O ? A ALA 104 ? A ALA 105 ? 1_555 NA ? G NA . ? A NA 125 ? 1_555 O ? L HOH . ? A HOH 135 ? 1_555 119.8 ? 6 O ? A LEU 103 ? A LEU 104 ? 1_555 NA ? G NA . ? A NA 125 ? 1_555 O ? L HOH . ? A HOH 135 ? 1_555 92.3 ? 7 O ? B ALA 104 ? B ALA 105 ? 1_555 NA ? K NA . ? B NA 1 ? 1_555 OG ? B SER 19 ? B SER 20 ? 1_555 85.5 ? 8 O ? B ALA 104 ? B ALA 105 ? 1_555 NA ? K NA . ? B NA 1 ? 1_555 O ? B LEU 103 ? B LEU 104 ? 1_555 69.4 ? 9 OG ? B SER 19 ? B SER 20 ? 1_555 NA ? K NA . ? B NA 1 ? 1_555 O ? B LEU 103 ? B LEU 104 ? 1_555 154.3 ? 10 O ? B ALA 104 ? B ALA 105 ? 1_555 NA ? K NA . ? B NA 1 ? 1_555 O ? M HOH . ? B HOH 146 ? 1_555 125.9 ? 11 OG ? B SER 19 ? B SER 20 ? 1_555 NA ? K NA . ? B NA 1 ? 1_555 O ? M HOH . ? B HOH 146 ? 1_555 98.5 ? 12 O ? B LEU 103 ? B LEU 104 ? 1_555 NA ? K NA . ? B NA 1 ? 1_555 O ? M HOH . ? B HOH 146 ? 1_555 92.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-06-20 4 'Structure model' 1 3 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 5.5456 -19.3067 18.3361 0.0949 0.3316 0.2296 -0.0672 0.0047 -0.0067 10.3245 24.9707 8.3523 -10.1321 3.1804 0.5268 0.3974 -0.4154 0.0181 0.0031 -0.5681 1.5377 -0.4146 0.1440 -0.5470 'X-RAY DIFFRACTION' 2 ? refined 13.9492 -21.3663 18.0098 0.1503 0.2997 0.0661 -0.1602 -0.0377 -0.0017 19.1267 11.3199 0.2101 1.0052 -0.8174 1.9375 -0.2657 0.2096 0.0561 -0.2984 -0.2750 0.2338 -0.1577 0.0578 -0.0309 'X-RAY DIFFRACTION' 3 ? refined 19.6430 -15.4498 20.8678 0.0224 0.1368 0.0536 -0.0237 -0.0042 -0.0170 1.2574 11.6538 9.8683 -3.5464 0.8705 2.5617 0.0069 -0.0967 0.0898 -0.0048 -0.0018 0.0875 -0.0528 0.0576 -0.2022 'X-RAY DIFFRACTION' 4 ? refined 24.4956 -9.9340 29.7634 0.0803 0.1727 0.0574 0.0009 -0.0068 -0.0401 4.1478 15.2706 8.7145 -0.4710 -0.1119 0.5365 0.0425 -0.2287 0.1862 -0.5468 0.3976 0.2982 0.4124 -0.3533 -0.1877 'X-RAY DIFFRACTION' 5 ? refined 19.1317 -20.4509 23.7300 0.0493 0.1267 0.0605 -0.0235 -0.0017 0.0070 6.8596 12.6663 12.9782 -0.8471 -2.7690 5.0222 0.0771 -0.1977 0.1207 -0.2689 -0.2757 -0.1225 0.4005 0.4559 -0.4474 'X-RAY DIFFRACTION' 6 ? refined 27.0500 -24.4809 20.0024 0.1820 0.0417 0.2596 0.0148 0.0543 0.0286 12.2766 1.4954 1.8745 -3.7323 1.6724 -1.3394 -0.3546 0.0596 0.2949 -0.2864 -0.5910 -0.0786 -0.0645 0.3036 -0.0188 'X-RAY DIFFRACTION' 7 ? refined 23.6153 -24.7145 27.9396 0.2162 0.2717 0.1521 -0.0404 -0.0444 0.0503 2.1663 30.1568 15.4517 -8.6291 -3.5678 3.1727 -0.2038 -0.3037 0.5075 0.0616 -0.0440 -0.3760 0.6107 0.3561 -0.2730 'X-RAY DIFFRACTION' 8 ? refined 25.8922 -17.1722 29.8261 0.1272 0.1523 0.0815 -0.0187 -0.0039 -0.0109 13.5978 6.3271 10.6865 8.8426 -5.8367 -6.0715 0.1767 0.0605 -0.2371 0.0972 -0.5114 -0.2034 0.0506 0.3284 -0.0791 'X-RAY DIFFRACTION' 9 ? refined 34.2323 -15.9475 24.8612 0.0767 0.1737 0.0959 0.0035 -0.0157 0.0160 7.9897 10.0375 12.4258 -3.3931 -7.7451 6.1938 -0.2383 0.0299 0.2084 -0.2971 -0.0052 -0.2293 0.2436 0.3986 0.4730 'X-RAY DIFFRACTION' 10 ? refined 38.6112 -9.9591 24.4397 0.0372 0.4213 0.1846 0.0230 -0.0002 0.0036 6.1888 15.6072 -0.5150 -0.5505 0.1677 -0.1739 -0.3319 0.2935 0.0384 0.0147 0.5881 -0.5360 0.0234 0.0040 0.0758 'X-RAY DIFFRACTION' 11 ? refined 33.8129 -3.8764 20.0746 0.1518 0.3136 0.2828 -0.0438 -0.0190 0.0278 16.9830 39.0965 -1.3536 1.6435 2.9077 0.7083 0.4461 -0.6032 0.1572 0.1905 0.8875 0.1223 -0.8603 0.0627 0.1097 'X-RAY DIFFRACTION' 12 ? refined 27.2147 1.7024 18.6357 0.1243 0.1296 0.2927 0.0260 -0.0233 -0.0012 2.0957 18.2337 11.2561 4.1224 -4.4925 -3.9673 -0.0304 -0.0134 0.0438 0.0166 -0.1199 -0.3203 0.1078 0.1700 -0.0269 'X-RAY DIFFRACTION' 13 ? refined 26.1508 -3.5930 14.1562 0.1506 0.1060 0.2393 -0.0266 -0.0158 0.0248 15.3292 20.7117 3.7954 -17.9068 -5.5497 6.5794 0.0865 -0.2919 0.2053 0.2817 0.5125 -0.5540 -0.1372 -0.4860 0.0209 'X-RAY DIFFRACTION' 14 ? refined 34.1402 -17.5492 17.2234 0.2121 0.1831 0.1378 0.0760 -0.0098 0.0138 2.3085 4.8264 3.3416 1.8890 -0.8085 -3.3617 0.0064 0.0215 -0.0279 -0.2864 -0.0452 -0.0632 0.6425 -0.2165 0.0466 'X-RAY DIFFRACTION' 15 ? refined 36.1033 -23.9936 18.8463 0.1436 0.1132 0.2344 0.0498 0.0065 -0.0082 11.5762 9.1097 15.5809 -2.1230 -1.7343 -5.9441 -0.0581 -0.4094 0.4676 -0.1714 -0.7942 -0.5433 -0.3224 1.1234 0.5208 'X-RAY DIFFRACTION' 16 ? refined 24.7997 -9.0936 16.4596 0.0208 0.0982 0.0851 -0.0161 0.0223 0.0134 7.9278 4.2496 3.4305 -4.1285 -1.9062 1.4276 0.0369 -0.1300 0.0931 0.1255 0.1519 0.0938 -0.0586 -0.1216 0.0410 'X-RAY DIFFRACTION' 17 ? refined 23.0954 0.5267 23.8508 0.1225 0.1716 0.2591 0.0274 -0.0821 -0.0901 0.3059 14.2560 10.1055 0.2795 -1.0074 -5.0887 -0.0679 -0.0059 0.0738 -0.1325 0.2001 -0.2448 0.0404 -0.4050 -0.0822 'X-RAY DIFFRACTION' 18 ? refined 20.9146 -9.7804 20.7649 0.0146 0.1058 0.1196 -0.0137 0.0114 -0.0651 5.5244 3.9657 9.3704 -4.8450 -3.9905 2.6173 -0.0995 -0.0498 0.1492 0.0368 0.1960 -0.1651 0.0528 0.1695 -0.0339 'X-RAY DIFFRACTION' 19 ? refined 28.1431 -19.9573 11.9814 0.0702 0.1821 0.1006 0.0291 0.0220 -0.0212 10.6855 16.7481 7.7109 -0.6386 -2.8031 -3.7876 0.0673 -0.1302 0.0629 0.7394 -0.5216 -0.3305 -0.8774 0.4926 0.4512 'X-RAY DIFFRACTION' 20 ? refined 9.9620 -11.3144 22.0340 0.1010 0.2462 0.1015 0.0131 0.0417 -0.0121 4.1456 9.4345 14.6923 1.8002 -0.1018 -3.8610 0.0216 0.1631 -0.1847 -0.4976 0.3289 0.4326 0.6293 -0.2666 -0.3866 'X-RAY DIFFRACTION' 21 ? refined 13.4792 -10.0383 13.5606 0.0377 0.1066 0.0689 -0.0110 0.0138 0.0022 3.6536 8.7001 10.4671 0.9160 -0.4329 5.5208 0.0978 0.0631 -0.1608 -0.2654 0.3555 -0.0832 0.2882 0.0171 -0.0251 'X-RAY DIFFRACTION' 22 ? refined 4.0155 -21.1505 5.7040 0.1122 0.1544 0.1202 -0.0444 -0.0381 0.0175 3.5093 7.5206 18.4598 -0.9575 2.0692 4.6525 0.1912 -0.1489 -0.0423 -0.1185 -0.4618 0.4585 -0.1610 0.6057 -0.7507 'X-RAY DIFFRACTION' 23 ? refined 3.2222 -15.2093 8.0732 0.0354 0.1723 0.0882 -0.0018 0.0107 0.0055 8.7763 8.6375 9.8117 3.0828 6.3433 5.8932 0.1840 -0.2026 0.0186 -0.3537 0.0163 0.3395 0.3786 0.0666 -0.7381 'X-RAY DIFFRACTION' 24 ? refined 11.6291 -6.3038 8.6680 0.0881 0.0611 0.1736 0.0060 0.0257 -0.0175 6.5047 8.0711 21.4228 2.5691 -7.7110 -3.9121 0.2949 -0.2842 -0.0108 -0.1626 0.6990 -0.3038 -0.2645 -0.4550 -0.1842 'X-RAY DIFFRACTION' 25 ? refined 11.4782 -4.7190 2.1800 0.2214 0.0836 0.2167 0.0209 0.0047 0.0565 3.7541 3.1662 7.7848 -2.4190 -4.7883 3.2484 0.0606 -0.0484 -0.0122 0.3219 0.3450 0.0260 -0.0851 -0.2974 -0.2896 'X-RAY DIFFRACTION' 26 ? refined 3.0425 -7.3387 5.9744 0.0802 0.1478 0.1373 0.0349 -0.0331 -0.0281 18.7046 34.8892 5.5256 8.1542 3.6918 2.3584 0.2436 -0.3512 0.1076 -0.4983 0.5859 0.3447 0.1477 -0.4020 -0.3582 'X-RAY DIFFRACTION' 27 ? refined 4.3516 -14.8666 -0.6707 0.0697 0.1418 0.0901 -0.0004 -0.0458 -0.0058 9.9298 7.3059 9.9506 -3.8562 -4.1114 -0.5506 -0.1981 -0.1441 0.3422 0.2452 0.1351 -0.0707 -0.1059 0.2225 0.0348 'X-RAY DIFFRACTION' 28 ? refined 10.5411 -14.2203 -5.4051 0.0544 0.1323 0.1324 0.0055 0.0181 0.0080 14.4675 8.2572 10.4918 4.6011 0.6160 -0.0944 0.1056 0.0439 -0.1494 -0.1852 0.2487 0.4902 -0.2177 -0.0834 0.0362 'X-RAY DIFFRACTION' 29 ? refined 11.0455 -20.6320 -8.8140 0.1690 0.2264 0.1285 -0.0183 -0.0075 0.0064 7.7014 8.4552 7.3051 -3.4891 -4.8793 0.7186 -0.2032 0.2903 -0.0871 0.3265 0.1251 -0.2460 -0.3760 0.6302 0.1263 'X-RAY DIFFRACTION' 30 ? refined 13.5633 -26.7117 -2.8680 0.5885 0.4552 0.1262 0.3116 -0.0325 -0.0944 -0.3352 43.9118 32.7567 1.2546 5.6704 -6.1088 0.4486 -0.5868 0.1382 0.2542 0.0295 0.4018 0.1811 1.7248 0.5711 'X-RAY DIFFRACTION' 31 ? refined 16.6932 -32.1012 4.3738 0.3362 0.1758 0.2204 0.0422 -0.0067 0.0191 10.1200 8.5350 11.4176 0.1301 5.4166 -1.3869 0.3104 -0.0621 -0.2483 -0.0794 0.0290 -0.5220 -0.4393 0.2681 0.5753 'X-RAY DIFFRACTION' 32 ? refined 19.5947 -23.2980 3.7915 0.2664 0.2466 0.0814 0.1288 0.0604 -0.0200 11.5159 38.7369 17.6310 13.9680 -7.2265 -25.7264 0.4279 -0.1301 -0.2978 0.2911 -0.2081 0.3423 -0.7425 0.7979 0.3463 'X-RAY DIFFRACTION' 33 ? refined 15.8771 -11.5390 -3.6753 0.1641 0.1818 0.2544 0.0092 0.0230 -0.0349 13.2922 9.9132 5.2327 -9.3331 1.3324 2.6689 0.3524 -0.4013 0.0489 0.1162 -0.6658 0.9944 -0.1775 0.0658 -0.2067 'X-RAY DIFFRACTION' 34 ? refined 18.1419 -9.4165 -3.1601 0.1515 0.1137 0.0797 -0.0319 0.0251 0.0115 6.3778 1.1863 7.1132 -0.3685 1.1376 0.4114 -0.0230 0.0157 0.0074 0.1967 0.2930 0.1211 -0.2028 -0.6074 0.1580 'X-RAY DIFFRACTION' 35 ? refined 12.9213 -25.0685 9.8161 0.1653 0.0853 0.0771 -0.0308 -0.0145 -0.0074 8.0306 4.8762 4.7999 2.6283 -3.1327 -3.3450 0.2336 -0.1022 -0.1315 -0.1679 -0.2921 0.0402 0.1405 0.4206 -0.0292 'X-RAY DIFFRACTION' 36 ? refined 8.5859 -29.6199 6.8879 0.4060 0.1084 0.1925 -0.0240 -0.1276 -0.0013 0.5320 1.4977 3.8369 0.6534 -0.2661 1.8065 0.0375 -0.0462 0.0087 0.0446 -0.2063 -0.1804 -0.1158 0.0282 -0.1091 'X-RAY DIFFRACTION' 37 ? refined 17.6717 -13.6788 5.8456 0.0578 0.0984 0.0628 -0.0110 0.0375 -0.0126 8.0932 8.5190 6.0038 6.7350 -3.9745 -4.2920 -0.1269 0.1073 0.0197 0.1729 0.1669 -0.0765 -0.1852 -0.0007 0.0978 'X-RAY DIFFRACTION' 38 ? refined 32.1914 -7.1060 8.5861 0.1169 0.2443 0.2584 -0.0234 0.0620 0.0002 1.5131 20.4674 17.3859 -2.6879 5.2601 -7.8223 -0.3113 -0.2625 0.5738 0.1121 0.2129 -0.3605 0.7983 -0.9143 0.3625 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 . . . . ? A 3 A 8 'X-RAY DIFFRACTION' ? 2 2 . . . . ? A 9 A 14 'X-RAY DIFFRACTION' ? 3 3 . . . . ? A 15 A 20 'X-RAY DIFFRACTION' ? 4 4 . . . . ? A 21 A 25 'X-RAY DIFFRACTION' ? 5 5 . . . . ? A 26 A 31 'X-RAY DIFFRACTION' ? 6 6 . . . . ? A 32 A 37 'X-RAY DIFFRACTION' ? 7 7 . . . . ? A 38 A 43 'X-RAY DIFFRACTION' ? 8 8 . . . . ? A 44 A 48 'X-RAY DIFFRACTION' ? 9 9 . . . . ? A 49 A 53 'X-RAY DIFFRACTION' ? 10 10 . . . . ? A 54 A 60 'X-RAY DIFFRACTION' ? 11 11 . . . . ? A 61 A 65 'X-RAY DIFFRACTION' ? 12 12 . . . . ? A 66 A 71 'X-RAY DIFFRACTION' ? 13 13 . . . . ? A 72 A 77 'X-RAY DIFFRACTION' ? 14 14 . . . . ? A 78 A 83 'X-RAY DIFFRACTION' ? 15 15 . . . . ? A 84 A 89 'X-RAY DIFFRACTION' ? 16 16 . . . . ? A 90 A 99 'X-RAY DIFFRACTION' ? 17 17 . . . . ? A 100 A 105 'X-RAY DIFFRACTION' ? 18 18 . . . . ? A 106 A 110 'X-RAY DIFFRACTION' ? 19 19 . . . . ? A 111 A 116 'X-RAY DIFFRACTION' ? 20 20 . . . . ? B 4 B 10 'X-RAY DIFFRACTION' ? 21 21 . . . . ? B 11 B 18 'X-RAY DIFFRACTION' ? 22 22 . . . . ? B 19 B 23 'X-RAY DIFFRACTION' ? 23 23 . . . . ? B 24 B 28 'X-RAY DIFFRACTION' ? 24 24 . . . . ? B 29 B 34 'X-RAY DIFFRACTION' ? 25 25 . . . . ? B 35 B 39 'X-RAY DIFFRACTION' ? 26 26 . . . . ? B 40 B 44 'X-RAY DIFFRACTION' ? 27 27 . . . . ? B 45 B 49 'X-RAY DIFFRACTION' ? 28 28 . . . . ? B 50 B 54 'X-RAY DIFFRACTION' ? 29 29 . . . . ? B 55 B 60 'X-RAY DIFFRACTION' ? 30 30 . . . . ? B 61 B 66 'X-RAY DIFFRACTION' ? 31 31 . . . . ? B 67 B 72 'X-RAY DIFFRACTION' ? 32 32 . . . . ? B 73 B 78 'X-RAY DIFFRACTION' ? 33 33 . . . . ? B 79 B 83 'X-RAY DIFFRACTION' ? 34 34 . . . . ? B 84 B 92 'X-RAY DIFFRACTION' ? 35 35 . . . . ? B 93 B 99 'X-RAY DIFFRACTION' ? 36 36 . . . . ? B 100 B 107 'X-RAY DIFFRACTION' ? 37 37 . . . . ? B 108 B 116 'X-RAY DIFFRACTION' ? 38 38 . . . . ? B 117 B 121 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 5 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 7 PHASER . ? ? ? ? phasing ? ? ? 8 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 105 ? ? -80.37 -145.41 2 1 ALA B 105 ? ? -84.58 -144.43 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 59 ? CG ? A GLU 58 CG 2 1 Y 1 A GLU 59 ? CD ? A GLU 58 CD 3 1 Y 1 A GLU 59 ? OE1 ? A GLU 58 OE1 4 1 Y 1 A GLU 59 ? OE2 ? A GLU 58 OE2 5 1 Y 1 B GLU 59 ? CG ? B GLU 58 CG 6 1 Y 1 B GLU 59 ? CD ? B GLU 58 CD 7 1 Y 1 B GLU 59 ? OE1 ? B GLU 58 OE1 8 1 Y 1 B GLU 59 ? OE2 ? B GLU 58 OE2 9 1 Y 1 B ARG 64 ? CG ? B ARG 63 CG 10 1 Y 1 B ARG 64 ? CD ? B ARG 63 CD 11 1 Y 1 B ARG 64 ? NE ? B ARG 63 NE 12 1 Y 1 B ARG 64 ? CZ ? B ARG 63 CZ 13 1 Y 1 B ARG 64 ? NH1 ? B ARG 63 NH1 14 1 Y 1 B ARG 64 ? NH2 ? B ARG 63 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 2 ? A PRO 1 2 1 Y 1 A ALA 3 ? A ALA 2 3 1 Y 1 A THR 117 ? A THR 116 4 1 Y 1 A ARG 118 ? A ARG 117 5 1 Y 1 A ARG 119 ? A ARG 118 6 1 Y 1 A VAL 120 ? A VAL 119 7 1 Y 1 A ALA 121 ? A ALA 120 8 1 Y 1 B PRO 2 ? B PRO 1 9 1 Y 1 B ALA 3 ? B ALA 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ETHANOL EOH 3 1,2-ETHANEDIOL EDO 4 'SODIUM ION' NA 5 water HOH #