data_3PH5 # _entry.id 3PH5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3PH5 RCSB RCSB062367 WWPDB D_1000062367 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3PH6 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PH5 _pdbx_database_status.recvd_initial_deposition_date 2010-11-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zocher, G.' 1 'Stehle, T.' 2 # _citation.id primary _citation.title 'Novel Approach to Protein Crystallization through Ligandation of Yttrium Cations' _citation.journal_abbrev J.Appl.Crystallogr. _citation.journal_volume 44 _citation.page_first 755 _citation.page_last 762 _citation.year 2011 _citation.journal_id_ASTM JACGAR _citation.country DK _citation.journal_id_ISSN 0021-8898 _citation.journal_id_CSD 0228 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI 10.1107/S0021889811017997 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zhang, F.' 1 primary 'Zocher, G.' 2 primary 'Sauter, A.' 3 primary 'Stehle, T.' 4 primary 'Schreiber, F.' 5 # _cell.entry_id 3PH5 _cell.length_a 40.800 _cell.length_b 63.570 _cell.length_c 134.030 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PH5 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Beta-lactoglobulin 18188.018 2 ? ? 'unp residues 18-178' ? 2 non-polymer syn 'YTTRIUM (III) ION' 88.906 4 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 water nat water 18.015 39 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Beta-LG # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAV FKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCH I ; _entity_poly.pdbx_seq_one_letter_code_can ;IVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAV FKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCH I ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 THR n 1 4 GLN n 1 5 THR n 1 6 MET n 1 7 LYS n 1 8 GLY n 1 9 LEU n 1 10 ASP n 1 11 ILE n 1 12 GLN n 1 13 LYS n 1 14 VAL n 1 15 ALA n 1 16 GLY n 1 17 THR n 1 18 TRP n 1 19 TYR n 1 20 SER n 1 21 LEU n 1 22 ALA n 1 23 MET n 1 24 ALA n 1 25 ALA n 1 26 SER n 1 27 ASP n 1 28 ILE n 1 29 SER n 1 30 LEU n 1 31 LEU n 1 32 ASP n 1 33 ALA n 1 34 GLN n 1 35 SER n 1 36 ALA n 1 37 PRO n 1 38 LEU n 1 39 ARG n 1 40 VAL n 1 41 TYR n 1 42 VAL n 1 43 GLU n 1 44 GLU n 1 45 LEU n 1 46 LYS n 1 47 PRO n 1 48 THR n 1 49 PRO n 1 50 GLU n 1 51 GLY n 1 52 ASP n 1 53 LEU n 1 54 GLU n 1 55 ILE n 1 56 LEU n 1 57 LEU n 1 58 GLN n 1 59 LYS n 1 60 TRP n 1 61 GLU n 1 62 ASN n 1 63 GLY n 1 64 GLU n 1 65 CYS n 1 66 ALA n 1 67 GLN n 1 68 LYS n 1 69 LYS n 1 70 ILE n 1 71 ILE n 1 72 ALA n 1 73 GLU n 1 74 LYS n 1 75 THR n 1 76 LYS n 1 77 ILE n 1 78 PRO n 1 79 ALA n 1 80 VAL n 1 81 PHE n 1 82 LYS n 1 83 ILE n 1 84 ASP n 1 85 ALA n 1 86 LEU n 1 87 ASN n 1 88 GLU n 1 89 ASN n 1 90 LYS n 1 91 VAL n 1 92 LEU n 1 93 VAL n 1 94 LEU n 1 95 ASP n 1 96 THR n 1 97 ASP n 1 98 TYR n 1 99 LYS n 1 100 LYS n 1 101 TYR n 1 102 LEU n 1 103 LEU n 1 104 PHE n 1 105 CYS n 1 106 MET n 1 107 GLU n 1 108 ASN n 1 109 SER n 1 110 ALA n 1 111 GLU n 1 112 PRO n 1 113 GLU n 1 114 GLN n 1 115 SER n 1 116 LEU n 1 117 ALA n 1 118 CYS n 1 119 GLN n 1 120 CYS n 1 121 LEU n 1 122 VAL n 1 123 ARG n 1 124 THR n 1 125 PRO n 1 126 GLU n 1 127 VAL n 1 128 ASP n 1 129 ASP n 1 130 GLU n 1 131 ALA n 1 132 LEU n 1 133 GLU n 1 134 LYS n 1 135 PHE n 1 136 ASP n 1 137 LYS n 1 138 ALA n 1 139 LEU n 1 140 LYS n 1 141 ALA n 1 142 LEU n 1 143 PRO n 1 144 MET n 1 145 HIS n 1 146 ILE n 1 147 ARG n 1 148 LEU n 1 149 SER n 1 150 PHE n 1 151 ASN n 1 152 PRO n 1 153 THR n 1 154 GLN n 1 155 LEU n 1 156 GLU n 1 157 GLU n 1 158 GLN n 1 159 CYS n 1 160 HIS n 1 161 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name bovine _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LACB_BOVIN _struct_ref.pdbx_db_accession P02754 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAV FKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCH I ; _struct_ref.pdbx_align_begin 18 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3PH5 A 1 ? 161 ? P02754 18 ? 178 ? 18 178 2 1 3PH5 B 1 ? 161 ? P02754 18 ? 178 ? 18 178 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YT3 non-polymer . 'YTTRIUM (III) ION' ? 'Y 3' 88.906 # _exptl.entry_id 3PH5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_percent_sol 48.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'Batch Crystallization' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details 'Crystallized in presents of 3.0 mM yttrium(III) chlorid, pH 7, Batch Crystallization, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' 'MAR scanner 345 mm plate' 2009-07-02 ? 2 CCD 'MARMOSAIC 225 mm CCD' 2009-07-13 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M copper 'SINGLE WAVELENGTH' x-ray 2 1 M DCCM 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.5418 1.0 2 1.8233 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 'ROTATING ANODE' 'RIGAKU MICROMAX-007 HF' ? ? ? 1.5418 2 SYNCHROTRON 'SLS BEAMLINE X06DA' SLS X06DA ? 1.8233 # _reflns.entry_id 3PH5 _reflns.observed_criterion_sigma_I 3 _reflns.observed_criterion_sigma_F 3 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.40 _reflns.number_obs 14221 _reflns.number_all 14221 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.111 _reflns.pdbx_Rsym_value 0.068 _reflns.pdbx_netI_over_sigmaI 19.1 _reflns.B_iso_Wilson_estimate 42.3 _reflns.pdbx_redundancy 5.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.46 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.662 _reflns_shell.pdbx_Rsym_value 0.523 _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1930 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 3PH5 _refine.ls_number_reflns_obs 13510 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.59 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.22432 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22230 _refine.ls_R_factor_R_free 0.26314 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 712 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.933 _refine.correlation_coeff_Fo_to_Fc_free 0.916 _refine.B_iso_mean 18.233 _refine.aniso_B[1][1] 5.94 _refine.aniso_B[2][2] -3.82 _refine.aniso_B[3][3] -2.12 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.276 _refine.overall_SU_ML 0.216 _refine.overall_SU_B 20.819 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1,2 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2446 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 2491 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 19.59 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 2492 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.989 1.993 ? 3386 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.102 5.000 ? 313 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.729 26.538 ? 104 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.234 15.000 ? 453 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 5.950 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.064 0.200 ? 397 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.021 ? 1834 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.535 4.000 ? 1583 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.888 4.000 ? 2552 'X-RAY DIFFRACTION' ? r_scbond_it 0.850 5.000 ? 909 'X-RAY DIFFRACTION' ? r_scangle_it 1.190 5.000 ? 834 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.461 _refine_ls_shell.number_reflns_R_work 949 _refine_ls_shell.R_factor_R_work 0.310 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.344 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3PH5 _struct.title 'Bovine beta lactoglobulin crystallized through ligandation of yttrium cations' _struct.pdbx_descriptor Beta-lactoglobulin _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PH5 _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'Transport Protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 2 ? H N N 2 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 10 ? ALA A 15 ? ASP A 27 ALA A 32 5 ? 6 HELX_P HELX_P2 2 ASP A 27 ? LEU A 31 ? ASP A 44 LEU A 48 5 ? 5 HELX_P HELX_P3 3 ASP A 128 ? LYS A 140 ? ASP A 145 LYS A 157 1 ? 13 HELX_P HELX_P4 4 ASN A 151 ? GLU A 157 ? ASN A 168 GLU A 174 1 ? 7 HELX_P HELX_P5 5 GLN A 158 ? ILE A 161 ? GLN A 175 ILE A 178 5 ? 4 HELX_P HELX_P6 6 ASP B 10 ? ALA B 15 ? ASP B 27 ALA B 32 5 ? 6 HELX_P HELX_P7 7 ASP B 27 ? LEU B 31 ? ASP B 44 LEU B 48 5 ? 5 HELX_P HELX_P8 8 ASP B 128 ? LEU B 139 ? ASP B 145 LEU B 156 1 ? 12 HELX_P HELX_P9 9 ASN B 151 ? GLU B 157 ? ASN B 168 GLU B 174 1 ? 7 HELX_P HELX_P10 10 GLN B 158 ? ILE B 161 ? GLN B 175 ILE B 178 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 65 SG ? ? ? 1_555 A CYS 159 SG ? ? A CYS 82 A CYS 176 1_555 ? ? ? ? ? ? ? 2.041 ? disulf2 disulf ? ? A CYS 105 SG ? ? ? 1_555 A CYS 118 SG ? ? A CYS 122 A CYS 135 1_555 ? ? ? ? ? ? ? 2.034 ? disulf3 disulf ? ? B CYS 65 SG ? ? ? 1_555 B CYS 159 SG ? ? B CYS 82 B CYS 176 1_555 ? ? ? ? ? ? ? 2.036 ? disulf4 disulf ? ? B CYS 105 SG ? ? ? 1_555 B CYS 118 SG ? ? B CYS 122 B CYS 135 1_555 ? ? ? ? ? ? ? 2.037 ? metalc1 metalc ? ? A ASP 52 OD2 ? ? ? 1_555 C YT3 . Y ? ? A ASP 69 A YT3 1 1_555 ? ? ? ? ? ? ? 2.210 ? metalc2 metalc ? ? B GLU 64 OE2 ? ? ? 1_555 G YT3 . Y ? ? B GLU 81 B YT3 3 1_555 ? ? ? ? ? ? ? 2.254 ? metalc3 metalc ? ? A GLU 126 OE2 ? ? ? 1_555 D YT3 . Y ? ? A GLU 143 A YT3 2 1_555 ? ? ? ? ? ? ? 2.430 ? metalc4 metalc ? ? B GLU 64 OE1 ? ? ? 1_555 G YT3 . Y ? ? B GLU 81 B YT3 3 1_555 ? ? ? ? ? ? ? 2.583 ? metalc5 metalc ? ? A GLU 50 OE1 ? ? ? 1_555 C YT3 . Y ? ? A GLU 67 A YT3 1 1_555 ? ? ? ? ? ? ? 2.621 ? metalc6 metalc ? ? A GLU 73 OE2 ? ? ? 1_555 C YT3 . Y ? ? A GLU 90 A YT3 1 1_555 ? ? ? ? ? ? ? 2.628 ? metalc7 metalc ? ? A GLU 126 OE1 ? ? ? 1_555 D YT3 . Y ? ? A GLU 143 A YT3 2 1_555 ? ? ? ? ? ? ? 2.709 ? metalc8 metalc ? ? B ASP 129 OD2 ? ? ? 1_555 H YT3 . Y ? ? B ASP 146 B YT3 4 1_555 ? ? ? ? ? ? ? 2.711 ? metalc9 metalc ? ? B ASP 129 OD1 ? ? ? 1_555 H YT3 . Y ? ? B ASP 146 B YT3 4 1_555 ? ? ? ? ? ? ? 3.352 ? metalc10 metalc ? ? A GLU 156 OE1 ? ? ? 1_555 C YT3 . Y ? ? A GLU 173 A YT3 1 3_554 ? ? ? ? ? ? ? 2.011 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 20 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel A 12 13 ? anti-parallel A 13 14 ? anti-parallel A 14 15 ? anti-parallel A 15 16 ? anti-parallel A 16 17 ? anti-parallel A 17 18 ? anti-parallel A 18 19 ? anti-parallel A 19 20 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 16 ? THR A 17 ? GLY A 33 THR A 34 A 2 VAL A 40 ? PRO A 47 ? VAL A 57 PRO A 64 A 3 LEU A 53 ? GLU A 61 ? LEU A 70 GLU A 78 A 4 GLU A 64 ? LYS A 74 ? GLU A 81 LYS A 91 A 5 VAL A 80 ? ALA A 85 ? VAL A 97 ALA A 102 A 6 GLU A 88 ? THR A 96 ? GLU A 105 THR A 113 A 7 TYR A 101 ? GLU A 107 ? TYR A 118 GLU A 124 A 8 ALA A 117 ? VAL A 122 ? ALA A 134 VAL A 139 A 9 TYR A 19 ? ALA A 25 ? TYR A 36 ALA A 42 A 10 ILE A 146 ? SER A 149 ? ILE A 163 SER A 166 A 11 ILE B 146 ? SER B 149 ? ILE B 163 SER B 166 A 12 TYR B 19 ? ALA B 25 ? TYR B 36 ALA B 42 A 13 ALA B 117 ? VAL B 122 ? ALA B 134 VAL B 139 A 14 TYR B 101 ? GLU B 107 ? TYR B 118 GLU B 124 A 15 GLU B 88 ? THR B 96 ? GLU B 105 THR B 113 A 16 VAL B 80 ? ALA B 85 ? VAL B 97 ALA B 102 A 17 CYS B 65 ? LYS B 74 ? CYS B 82 LYS B 91 A 18 LEU B 53 ? TRP B 60 ? LEU B 70 TRP B 77 A 19 TYR B 41 ? PRO B 47 ? TYR B 58 PRO B 64 A 20 GLY B 16 ? THR B 17 ? GLY B 33 THR B 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 16 ? N GLY A 33 O LEU A 45 ? O LEU A 62 A 2 3 N LYS A 46 ? N LYS A 63 O GLU A 54 ? O GLU A 71 A 3 4 N ILE A 55 ? N ILE A 72 O ILE A 70 ? O ILE A 87 A 4 5 N GLU A 73 ? N GLU A 90 O LYS A 82 ? O LYS A 99 A 5 6 N PHE A 81 ? N PHE A 98 O VAL A 91 ? O VAL A 108 A 6 7 N ASP A 95 ? N ASP A 112 O LEU A 103 ? O LEU A 120 A 7 8 N PHE A 104 ? N PHE A 121 O GLN A 119 ? O GLN A 136 A 8 9 O CYS A 118 ? O CYS A 135 N ALA A 24 ? N ALA A 41 A 9 10 N MET A 23 ? N MET A 40 O LEU A 148 ? O LEU A 165 A 10 11 N ARG A 147 ? N ARG A 164 O ARG B 147 ? O ARG B 164 A 11 12 O LEU B 148 ? O LEU B 165 N MET B 23 ? N MET B 40 A 12 13 N ALA B 22 ? N ALA B 39 O CYS B 120 ? O CYS B 137 A 13 14 O ALA B 117 ? O ALA B 134 N MET B 106 ? N MET B 123 A 14 15 O LEU B 103 ? O LEU B 120 N ASP B 95 ? N ASP B 112 A 15 16 O VAL B 91 ? O VAL B 108 N PHE B 81 ? N PHE B 98 A 16 17 O LYS B 82 ? O LYS B 99 N GLU B 73 ? N GLU B 90 A 17 18 O ILE B 70 ? O ILE B 87 N ILE B 55 ? N ILE B 72 A 18 19 O GLU B 54 ? O GLU B 71 N LYS B 46 ? N LYS B 63 A 19 20 O LEU B 45 ? O LEU B 62 N GLY B 16 ? N GLY B 33 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE YT3 A 1' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE YT3 A 2' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 5' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CL A 6' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE YT3 B 3' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE YT3 B 4' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CL F . ? CL A 6 . ? 1_555 ? 2 AC1 5 GLU A 50 ? GLU A 67 . ? 1_555 ? 3 AC1 5 ASP A 52 ? ASP A 69 . ? 1_555 ? 4 AC1 5 GLU A 73 ? GLU A 90 . ? 1_555 ? 5 AC1 5 GLU A 156 ? GLU A 173 . ? 3_544 ? 6 AC2 5 CL E . ? CL A 5 . ? 1_555 ? 7 AC2 5 GLU A 126 ? GLU A 143 . ? 1_555 ? 8 AC2 5 GLU B 50 ? GLU B 67 . ? 4_455 ? 9 AC2 5 ASP B 52 ? ASP B 69 . ? 4_455 ? 10 AC2 5 GLU B 73 ? GLU B 90 . ? 4_455 ? 11 AC3 4 YT3 D . ? YT3 A 2 . ? 1_555 ? 12 AC3 4 GLU A 126 ? GLU A 143 . ? 1_555 ? 13 AC3 4 GLU B 50 ? GLU B 67 . ? 4_455 ? 14 AC3 4 GLU B 73 ? GLU B 90 . ? 4_455 ? 15 AC4 4 YT3 C . ? YT3 A 1 . ? 1_555 ? 16 AC4 4 GLU A 50 ? GLU A 67 . ? 1_555 ? 17 AC4 4 ASP A 52 ? ASP A 69 . ? 1_555 ? 18 AC4 4 GLU A 73 ? GLU A 90 . ? 1_555 ? 19 AC5 3 GLU B 64 ? GLU B 81 . ? 1_555 ? 20 AC5 3 GLU B 130 ? GLU B 147 . ? 1_655 ? 21 AC5 3 GLU B 133 ? GLU B 150 . ? 1_655 ? 22 AC6 2 ASP B 129 ? ASP B 146 . ? 1_555 ? 23 AC6 2 GLU B 157 ? GLU B 174 . ? 4_445 ? # _database_PDB_matrix.entry_id 3PH5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3PH5 _atom_sites.fract_transf_matrix[1][1] 0.024510 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015731 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007461 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S Y # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 18 ? ? ? A . n A 1 2 VAL 2 19 ? ? ? A . n A 1 3 THR 3 20 20 THR THR A . n A 1 4 GLN 4 21 21 GLN GLN A . n A 1 5 THR 5 22 22 THR THR A . n A 1 6 MET 6 23 23 MET MET A . n A 1 7 LYS 7 24 24 LYS LYS A . n A 1 8 GLY 8 25 25 GLY GLY A . n A 1 9 LEU 9 26 26 LEU LEU A . n A 1 10 ASP 10 27 27 ASP ASP A . n A 1 11 ILE 11 28 28 ILE ILE A . n A 1 12 GLN 12 29 29 GLN GLN A . n A 1 13 LYS 13 30 30 LYS LYS A . n A 1 14 VAL 14 31 31 VAL VAL A . n A 1 15 ALA 15 32 32 ALA ALA A . n A 1 16 GLY 16 33 33 GLY GLY A . n A 1 17 THR 17 34 34 THR THR A . n A 1 18 TRP 18 35 35 TRP TRP A . n A 1 19 TYR 19 36 36 TYR TYR A . n A 1 20 SER 20 37 37 SER SER A . n A 1 21 LEU 21 38 38 LEU LEU A . n A 1 22 ALA 22 39 39 ALA ALA A . n A 1 23 MET 23 40 40 MET MET A . n A 1 24 ALA 24 41 41 ALA ALA A . n A 1 25 ALA 25 42 42 ALA ALA A . n A 1 26 SER 26 43 43 SER SER A . n A 1 27 ASP 27 44 44 ASP ASP A . n A 1 28 ILE 28 45 45 ILE ILE A . n A 1 29 SER 29 46 46 SER SER A . n A 1 30 LEU 30 47 47 LEU LEU A . n A 1 31 LEU 31 48 48 LEU LEU A . n A 1 32 ASP 32 49 49 ASP ASP A . n A 1 33 ALA 33 50 50 ALA ALA A . n A 1 34 GLN 34 51 51 GLN GLN A . n A 1 35 SER 35 52 52 SER SER A . n A 1 36 ALA 36 53 53 ALA ALA A . n A 1 37 PRO 37 54 54 PRO PRO A . n A 1 38 LEU 38 55 55 LEU LEU A . n A 1 39 ARG 39 56 56 ARG ARG A . n A 1 40 VAL 40 57 57 VAL VAL A . n A 1 41 TYR 41 58 58 TYR TYR A . n A 1 42 VAL 42 59 59 VAL VAL A . n A 1 43 GLU 43 60 60 GLU GLU A . n A 1 44 GLU 44 61 61 GLU GLU A . n A 1 45 LEU 45 62 62 LEU LEU A . n A 1 46 LYS 46 63 63 LYS LYS A . n A 1 47 PRO 47 64 64 PRO PRO A . n A 1 48 THR 48 65 65 THR THR A . n A 1 49 PRO 49 66 66 PRO PRO A . n A 1 50 GLU 50 67 67 GLU GLU A . n A 1 51 GLY 51 68 68 GLY GLY A . n A 1 52 ASP 52 69 69 ASP ASP A . n A 1 53 LEU 53 70 70 LEU LEU A . n A 1 54 GLU 54 71 71 GLU GLU A . n A 1 55 ILE 55 72 72 ILE ILE A . n A 1 56 LEU 56 73 73 LEU LEU A . n A 1 57 LEU 57 74 74 LEU LEU A . n A 1 58 GLN 58 75 75 GLN GLN A . n A 1 59 LYS 59 76 76 LYS LYS A . n A 1 60 TRP 60 77 77 TRP TRP A . n A 1 61 GLU 61 78 78 GLU GLU A . n A 1 62 ASN 62 79 79 ASN ASN A . n A 1 63 GLY 63 80 80 GLY GLY A . n A 1 64 GLU 64 81 81 GLU GLU A . n A 1 65 CYS 65 82 82 CYS CYS A . n A 1 66 ALA 66 83 83 ALA ALA A . n A 1 67 GLN 67 84 84 GLN GLN A . n A 1 68 LYS 68 85 85 LYS LYS A . n A 1 69 LYS 69 86 86 LYS LYS A . n A 1 70 ILE 70 87 87 ILE ILE A . n A 1 71 ILE 71 88 88 ILE ILE A . n A 1 72 ALA 72 89 89 ALA ALA A . n A 1 73 GLU 73 90 90 GLU GLU A . n A 1 74 LYS 74 91 91 LYS LYS A . n A 1 75 THR 75 92 92 THR THR A . n A 1 76 LYS 76 93 93 LYS LYS A . n A 1 77 ILE 77 94 94 ILE ILE A . n A 1 78 PRO 78 95 95 PRO PRO A . n A 1 79 ALA 79 96 96 ALA ALA A . n A 1 80 VAL 80 97 97 VAL VAL A . n A 1 81 PHE 81 98 98 PHE PHE A . n A 1 82 LYS 82 99 99 LYS LYS A . n A 1 83 ILE 83 100 100 ILE ILE A . n A 1 84 ASP 84 101 101 ASP ASP A . n A 1 85 ALA 85 102 102 ALA ALA A . n A 1 86 LEU 86 103 103 LEU LEU A . n A 1 87 ASN 87 104 104 ASN ASN A . n A 1 88 GLU 88 105 105 GLU GLU A . n A 1 89 ASN 89 106 106 ASN ASN A . n A 1 90 LYS 90 107 107 LYS LYS A . n A 1 91 VAL 91 108 108 VAL VAL A . n A 1 92 LEU 92 109 109 LEU LEU A . n A 1 93 VAL 93 110 110 VAL VAL A . n A 1 94 LEU 94 111 111 LEU LEU A . n A 1 95 ASP 95 112 112 ASP ASP A . n A 1 96 THR 96 113 113 THR THR A . n A 1 97 ASP 97 114 114 ASP ASP A . n A 1 98 TYR 98 115 115 TYR TYR A . n A 1 99 LYS 99 116 116 LYS LYS A . n A 1 100 LYS 100 117 117 LYS LYS A . n A 1 101 TYR 101 118 118 TYR TYR A . n A 1 102 LEU 102 119 119 LEU LEU A . n A 1 103 LEU 103 120 120 LEU LEU A . n A 1 104 PHE 104 121 121 PHE PHE A . n A 1 105 CYS 105 122 122 CYS CYS A . n A 1 106 MET 106 123 123 MET MET A . n A 1 107 GLU 107 124 124 GLU GLU A . n A 1 108 ASN 108 125 125 ASN ASN A . n A 1 109 SER 109 126 126 SER SER A . n A 1 110 ALA 110 127 127 ALA ALA A . n A 1 111 GLU 111 128 128 GLU GLU A . n A 1 112 PRO 112 129 129 PRO PRO A . n A 1 113 GLU 113 130 130 GLU GLU A . n A 1 114 GLN 114 131 131 GLN GLN A . n A 1 115 SER 115 132 132 SER SER A . n A 1 116 LEU 116 133 133 LEU LEU A . n A 1 117 ALA 117 134 134 ALA ALA A . n A 1 118 CYS 118 135 135 CYS CYS A . n A 1 119 GLN 119 136 136 GLN GLN A . n A 1 120 CYS 120 137 137 CYS CYS A . n A 1 121 LEU 121 138 138 LEU LEU A . n A 1 122 VAL 122 139 139 VAL VAL A . n A 1 123 ARG 123 140 140 ARG ARG A . n A 1 124 THR 124 141 141 THR THR A . n A 1 125 PRO 125 142 142 PRO PRO A . n A 1 126 GLU 126 143 143 GLU GLU A . n A 1 127 VAL 127 144 144 VAL VAL A . n A 1 128 ASP 128 145 145 ASP ASP A . n A 1 129 ASP 129 146 146 ASP ASP A . n A 1 130 GLU 130 147 147 GLU GLU A . n A 1 131 ALA 131 148 148 ALA ALA A . n A 1 132 LEU 132 149 149 LEU LEU A . n A 1 133 GLU 133 150 150 GLU GLU A . n A 1 134 LYS 134 151 151 LYS LYS A . n A 1 135 PHE 135 152 152 PHE PHE A . n A 1 136 ASP 136 153 153 ASP ASP A . n A 1 137 LYS 137 154 154 LYS LYS A . n A 1 138 ALA 138 155 155 ALA ALA A . n A 1 139 LEU 139 156 156 LEU LEU A . n A 1 140 LYS 140 157 157 LYS LYS A . n A 1 141 ALA 141 158 158 ALA ALA A . n A 1 142 LEU 142 159 159 LEU LEU A . n A 1 143 PRO 143 160 160 PRO PRO A . n A 1 144 MET 144 161 161 MET MET A . n A 1 145 HIS 145 162 162 HIS HIS A . n A 1 146 ILE 146 163 163 ILE ILE A . n A 1 147 ARG 147 164 164 ARG ARG A . n A 1 148 LEU 148 165 165 LEU LEU A . n A 1 149 SER 149 166 166 SER SER A . n A 1 150 PHE 150 167 167 PHE PHE A . n A 1 151 ASN 151 168 168 ASN ASN A . n A 1 152 PRO 152 169 169 PRO PRO A . n A 1 153 THR 153 170 170 THR THR A . n A 1 154 GLN 154 171 171 GLN GLN A . n A 1 155 LEU 155 172 172 LEU LEU A . n A 1 156 GLU 156 173 173 GLU GLU A . n A 1 157 GLU 157 174 174 GLU GLU A . n A 1 158 GLN 158 175 175 GLN GLN A . n A 1 159 CYS 159 176 176 CYS CYS A . n A 1 160 HIS 160 177 177 HIS HIS A . n A 1 161 ILE 161 178 178 ILE ILE A . n B 1 1 ILE 1 18 ? ? ? B . n B 1 2 VAL 2 19 ? ? ? B . n B 1 3 THR 3 20 ? ? ? B . n B 1 4 GLN 4 21 ? ? ? B . n B 1 5 THR 5 22 ? ? ? B . n B 1 6 MET 6 23 23 MET MET B . n B 1 7 LYS 7 24 24 LYS LYS B . n B 1 8 GLY 8 25 25 GLY GLY B . n B 1 9 LEU 9 26 26 LEU LEU B . n B 1 10 ASP 10 27 27 ASP ASP B . n B 1 11 ILE 11 28 28 ILE ILE B . n B 1 12 GLN 12 29 29 GLN GLN B . n B 1 13 LYS 13 30 30 LYS LYS B . n B 1 14 VAL 14 31 31 VAL VAL B . n B 1 15 ALA 15 32 32 ALA ALA B . n B 1 16 GLY 16 33 33 GLY GLY B . n B 1 17 THR 17 34 34 THR THR B . n B 1 18 TRP 18 35 35 TRP TRP B . n B 1 19 TYR 19 36 36 TYR TYR B . n B 1 20 SER 20 37 37 SER SER B . n B 1 21 LEU 21 38 38 LEU LEU B . n B 1 22 ALA 22 39 39 ALA ALA B . n B 1 23 MET 23 40 40 MET MET B . n B 1 24 ALA 24 41 41 ALA ALA B . n B 1 25 ALA 25 42 42 ALA ALA B . n B 1 26 SER 26 43 43 SER SER B . n B 1 27 ASP 27 44 44 ASP ASP B . n B 1 28 ILE 28 45 45 ILE ILE B . n B 1 29 SER 29 46 46 SER SER B . n B 1 30 LEU 30 47 47 LEU LEU B . n B 1 31 LEU 31 48 48 LEU LEU B . n B 1 32 ASP 32 49 49 ASP ASP B . n B 1 33 ALA 33 50 50 ALA ALA B . n B 1 34 GLN 34 51 51 GLN GLN B . n B 1 35 SER 35 52 52 SER SER B . n B 1 36 ALA 36 53 53 ALA ALA B . n B 1 37 PRO 37 54 54 PRO PRO B . n B 1 38 LEU 38 55 55 LEU LEU B . n B 1 39 ARG 39 56 56 ARG ARG B . n B 1 40 VAL 40 57 57 VAL VAL B . n B 1 41 TYR 41 58 58 TYR TYR B . n B 1 42 VAL 42 59 59 VAL VAL B . n B 1 43 GLU 43 60 60 GLU GLU B . n B 1 44 GLU 44 61 61 GLU GLU B . n B 1 45 LEU 45 62 62 LEU LEU B . n B 1 46 LYS 46 63 63 LYS LYS B . n B 1 47 PRO 47 64 64 PRO PRO B . n B 1 48 THR 48 65 65 THR THR B . n B 1 49 PRO 49 66 66 PRO PRO B . n B 1 50 GLU 50 67 67 GLU GLU B . n B 1 51 GLY 51 68 68 GLY GLY B . n B 1 52 ASP 52 69 69 ASP ASP B . n B 1 53 LEU 53 70 70 LEU LEU B . n B 1 54 GLU 54 71 71 GLU GLU B . n B 1 55 ILE 55 72 72 ILE ILE B . n B 1 56 LEU 56 73 73 LEU LEU B . n B 1 57 LEU 57 74 74 LEU LEU B . n B 1 58 GLN 58 75 75 GLN GLN B . n B 1 59 LYS 59 76 76 LYS LYS B . n B 1 60 TRP 60 77 77 TRP TRP B . n B 1 61 GLU 61 78 78 GLU GLU B . n B 1 62 ASN 62 79 79 ASN ASN B . n B 1 63 GLY 63 80 80 GLY GLY B . n B 1 64 GLU 64 81 81 GLU GLU B . n B 1 65 CYS 65 82 82 CYS CYS B . n B 1 66 ALA 66 83 83 ALA ALA B . n B 1 67 GLN 67 84 84 GLN GLN B . n B 1 68 LYS 68 85 85 LYS LYS B . n B 1 69 LYS 69 86 86 LYS LYS B . n B 1 70 ILE 70 87 87 ILE ILE B . n B 1 71 ILE 71 88 88 ILE ILE B . n B 1 72 ALA 72 89 89 ALA ALA B . n B 1 73 GLU 73 90 90 GLU GLU B . n B 1 74 LYS 74 91 91 LYS LYS B . n B 1 75 THR 75 92 92 THR THR B . n B 1 76 LYS 76 93 93 LYS LYS B . n B 1 77 ILE 77 94 94 ILE ILE B . n B 1 78 PRO 78 95 95 PRO PRO B . n B 1 79 ALA 79 96 96 ALA ALA B . n B 1 80 VAL 80 97 97 VAL VAL B . n B 1 81 PHE 81 98 98 PHE PHE B . n B 1 82 LYS 82 99 99 LYS LYS B . n B 1 83 ILE 83 100 100 ILE ILE B . n B 1 84 ASP 84 101 101 ASP ASP B . n B 1 85 ALA 85 102 102 ALA ALA B . n B 1 86 LEU 86 103 103 LEU LEU B . n B 1 87 ASN 87 104 104 ASN ASN B . n B 1 88 GLU 88 105 105 GLU GLU B . n B 1 89 ASN 89 106 106 ASN ASN B . n B 1 90 LYS 90 107 107 LYS LYS B . n B 1 91 VAL 91 108 108 VAL VAL B . n B 1 92 LEU 92 109 109 LEU LEU B . n B 1 93 VAL 93 110 110 VAL VAL B . n B 1 94 LEU 94 111 111 LEU LEU B . n B 1 95 ASP 95 112 112 ASP ASP B . n B 1 96 THR 96 113 113 THR THR B . n B 1 97 ASP 97 114 114 ASP ASP B . n B 1 98 TYR 98 115 115 TYR TYR B . n B 1 99 LYS 99 116 116 LYS LYS B . n B 1 100 LYS 100 117 117 LYS LYS B . n B 1 101 TYR 101 118 118 TYR TYR B . n B 1 102 LEU 102 119 119 LEU LEU B . n B 1 103 LEU 103 120 120 LEU LEU B . n B 1 104 PHE 104 121 121 PHE PHE B . n B 1 105 CYS 105 122 122 CYS CYS B . n B 1 106 MET 106 123 123 MET MET B . n B 1 107 GLU 107 124 124 GLU GLU B . n B 1 108 ASN 108 125 125 ASN ASN B . n B 1 109 SER 109 126 126 SER SER B . n B 1 110 ALA 110 127 127 ALA ALA B . n B 1 111 GLU 111 128 128 GLU GLU B . n B 1 112 PRO 112 129 129 PRO PRO B . n B 1 113 GLU 113 130 130 GLU GLU B . n B 1 114 GLN 114 131 131 GLN GLN B . n B 1 115 SER 115 132 132 SER SER B . n B 1 116 LEU 116 133 133 LEU LEU B . n B 1 117 ALA 117 134 134 ALA ALA B . n B 1 118 CYS 118 135 135 CYS CYS B . n B 1 119 GLN 119 136 136 GLN GLN B . n B 1 120 CYS 120 137 137 CYS CYS B . n B 1 121 LEU 121 138 138 LEU LEU B . n B 1 122 VAL 122 139 139 VAL VAL B . n B 1 123 ARG 123 140 140 ARG ARG B . n B 1 124 THR 124 141 141 THR THR B . n B 1 125 PRO 125 142 142 PRO PRO B . n B 1 126 GLU 126 143 143 GLU GLU B . n B 1 127 VAL 127 144 144 VAL VAL B . n B 1 128 ASP 128 145 145 ASP ASP B . n B 1 129 ASP 129 146 146 ASP ASP B . n B 1 130 GLU 130 147 147 GLU GLU B . n B 1 131 ALA 131 148 148 ALA ALA B . n B 1 132 LEU 132 149 149 LEU LEU B . n B 1 133 GLU 133 150 150 GLU GLU B . n B 1 134 LYS 134 151 151 LYS LYS B . n B 1 135 PHE 135 152 152 PHE PHE B . n B 1 136 ASP 136 153 153 ASP ASP B . n B 1 137 LYS 137 154 154 LYS LYS B . n B 1 138 ALA 138 155 155 ALA ALA B . n B 1 139 LEU 139 156 156 LEU LEU B . n B 1 140 LYS 140 157 157 LYS LYS B . n B 1 141 ALA 141 158 158 ALA ALA B . n B 1 142 LEU 142 159 159 LEU LEU B . n B 1 143 PRO 143 160 160 PRO PRO B . n B 1 144 MET 144 161 161 MET MET B . n B 1 145 HIS 145 162 162 HIS HIS B . n B 1 146 ILE 146 163 163 ILE ILE B . n B 1 147 ARG 147 164 164 ARG ARG B . n B 1 148 LEU 148 165 165 LEU LEU B . n B 1 149 SER 149 166 166 SER SER B . n B 1 150 PHE 150 167 167 PHE PHE B . n B 1 151 ASN 151 168 168 ASN ASN B . n B 1 152 PRO 152 169 169 PRO PRO B . n B 1 153 THR 153 170 170 THR THR B . n B 1 154 GLN 154 171 171 GLN GLN B . n B 1 155 LEU 155 172 172 LEU LEU B . n B 1 156 GLU 156 173 173 GLU GLU B . n B 1 157 GLU 157 174 174 GLU GLU B . n B 1 158 GLN 158 175 175 GLN GLN B . n B 1 159 CYS 159 176 176 CYS CYS B . n B 1 160 HIS 160 177 177 HIS HIS B . n B 1 161 ILE 161 178 178 ILE ILE B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA monomeric 1 2 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,I 2 1 B,G,H,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 52 ? A ASP 69 ? 1_555 Y ? C YT3 . ? A YT3 1 ? 1_555 OE1 ? A GLU 50 ? A GLU 67 ? 1_555 72.4 ? 2 OD2 ? A ASP 52 ? A ASP 69 ? 1_555 Y ? C YT3 . ? A YT3 1 ? 1_555 OE2 ? A GLU 73 ? A GLU 90 ? 1_555 82.0 ? 3 OE1 ? A GLU 50 ? A GLU 67 ? 1_555 Y ? C YT3 . ? A YT3 1 ? 1_555 OE2 ? A GLU 73 ? A GLU 90 ? 1_555 144.5 ? 4 OD2 ? A ASP 52 ? A ASP 69 ? 1_555 Y ? C YT3 . ? A YT3 1 ? 1_555 OE1 ? A GLU 156 ? A GLU 173 ? 1_555 27.7 ? 5 OE1 ? A GLU 50 ? A GLU 67 ? 1_555 Y ? C YT3 . ? A YT3 1 ? 1_555 OE1 ? A GLU 156 ? A GLU 173 ? 1_555 76.2 ? 6 OE2 ? A GLU 73 ? A GLU 90 ? 1_555 Y ? C YT3 . ? A YT3 1 ? 1_555 OE1 ? A GLU 156 ? A GLU 173 ? 1_555 69.8 ? 7 OE2 ? B GLU 64 ? B GLU 81 ? 1_555 Y ? G YT3 . ? B YT3 3 ? 1_555 OE1 ? B GLU 64 ? B GLU 81 ? 1_555 53.4 ? 8 OE2 ? A GLU 126 ? A GLU 143 ? 1_555 Y ? D YT3 . ? A YT3 2 ? 1_555 OE1 ? A GLU 126 ? A GLU 143 ? 1_555 50.0 ? 9 OD2 ? B ASP 129 ? B ASP 146 ? 1_555 Y ? H YT3 . ? B YT3 4 ? 1_555 OD1 ? B ASP 129 ? B ASP 146 ? 1_555 40.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-21 2 'Structure model' 1 1 2014-02-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -0.4725 -2.6150 -24.0739 0.0489 0.0655 0.0476 0.0115 0.0211 -0.0241 2.3605 5.7033 6.7248 -0.1435 1.4178 0.8349 0.0346 -0.0130 -0.0216 0.1489 -0.2325 -0.2307 -0.3374 0.3531 0.0529 'X-RAY DIFFRACTION' 2 ? refined 7.8101 2.2892 5.2634 0.1579 0.0707 0.1636 0.0127 -0.0695 -0.0147 2.6503 5.2037 6.8449 1.6861 1.6666 -0.1186 0.1926 -0.0549 -0.1377 -0.1227 -0.0669 -0.3256 0.8738 0.0062 0.0669 'X-RAY DIFFRACTION' 3 ? refined 2.5009 -1.6154 -20.3650 0.3176 0.1484 0.4036 0.0545 0.1429 -0.1638 1.1952 0.9565 6.1459 0.0056 2.1813 -1.4033 0.1725 0.2222 -0.3947 0.1728 -0.3285 -0.0361 0.1110 0.2650 -0.0409 'X-RAY DIFFRACTION' 4 ? refined 1.9735 1.4686 -15.1423 0.0403 0.0989 0.2365 0.0421 0.0177 -0.0028 0.2935 1.9745 4.1139 0.6949 0.5369 0.2980 -0.0450 0.0414 0.0035 0.0022 -0.0762 -0.1762 -0.1921 -0.0371 -0.1818 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 20 A 178 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 23 B 178 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 1 A 6 ? . . . . ? 'X-RAY DIFFRACTION' 4 3 B 3 B 4 ? . . . . ? 'X-RAY DIFFRACTION' 5 4 A 3 A 16 ? . . . . ? 'X-RAY DIFFRACTION' 6 4 A 179 A 193 ? . . . . ? 'X-RAY DIFFRACTION' 7 4 B 15 B 15 ? . . . . ? 'X-RAY DIFFRACTION' 8 4 B 179 B 192 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal RAMDAQ 'data collection' . ? 1 SHARP phasing . ? 2 REFMAC refinement 5.5.0110 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 115 ? ? 74.41 -41.74 2 1 LYS A 117 ? ? -126.58 -57.70 3 1 ASP B 49 ? ? -68.86 3.18 4 1 GLU B 81 ? ? -171.43 148.45 5 1 TYR B 115 ? ? 69.70 -40.90 6 1 LYS B 117 ? ? -130.32 -50.64 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 21 ? CG ? A GLN 4 CG 2 1 Y 1 A GLN 21 ? CD ? A GLN 4 CD 3 1 Y 1 A GLN 21 ? OE1 ? A GLN 4 OE1 4 1 Y 1 A GLN 21 ? NE2 ? A GLN 4 NE2 5 1 Y 1 A LYS 86 ? CE ? A LYS 69 CE 6 1 Y 1 A LYS 86 ? NZ ? A LYS 69 NZ 7 1 Y 1 A LYS 93 ? CG ? A LYS 76 CG 8 1 Y 1 A LYS 93 ? CD ? A LYS 76 CD 9 1 Y 1 A LYS 93 ? CE ? A LYS 76 CE 10 1 Y 1 A LYS 93 ? NZ ? A LYS 76 NZ 11 1 Y 1 A GLU 128 ? CG ? A GLU 111 CG 12 1 Y 1 A GLU 128 ? CD ? A GLU 111 CD 13 1 Y 1 A GLU 128 ? OE1 ? A GLU 111 OE1 14 1 Y 1 A GLU 128 ? OE2 ? A GLU 111 OE2 15 1 Y 1 A GLN 131 ? CG ? A GLN 114 CG 16 1 Y 1 A GLN 131 ? CD ? A GLN 114 CD 17 1 Y 1 A GLN 131 ? OE1 ? A GLN 114 OE1 18 1 Y 1 A GLN 131 ? NE2 ? A GLN 114 NE2 19 1 Y 1 A LYS 154 ? CE ? A LYS 137 CE 20 1 Y 1 A LYS 154 ? NZ ? A LYS 137 NZ 21 1 Y 1 B MET 23 ? CG ? B MET 6 CG 22 1 Y 1 B MET 23 ? SD ? B MET 6 SD 23 1 Y 1 B MET 23 ? CE ? B MET 6 CE 24 1 Y 1 B LYS 86 ? CD ? B LYS 69 CD 25 1 Y 1 B LYS 86 ? CE ? B LYS 69 CE 26 1 Y 1 B LYS 86 ? NZ ? B LYS 69 NZ 27 1 Y 1 B LYS 93 ? CG ? B LYS 76 CG 28 1 Y 1 B LYS 93 ? CD ? B LYS 76 CD 29 1 Y 1 B LYS 93 ? CE ? B LYS 76 CE 30 1 Y 1 B LYS 93 ? NZ ? B LYS 76 NZ 31 1 Y 1 B LYS 116 ? CG ? B LYS 99 CG 32 1 Y 1 B LYS 116 ? CD ? B LYS 99 CD 33 1 Y 1 B LYS 116 ? CE ? B LYS 99 CE 34 1 Y 1 B LYS 116 ? NZ ? B LYS 99 NZ 35 1 Y 1 B LYS 117 ? CE ? B LYS 100 CE 36 1 Y 1 B LYS 117 ? NZ ? B LYS 100 NZ 37 1 Y 1 B GLU 130 ? CG ? B GLU 113 CG 38 1 Y 1 B GLU 130 ? CD ? B GLU 113 CD 39 1 Y 1 B GLU 130 ? OE1 ? B GLU 113 OE1 40 1 Y 1 B GLU 130 ? OE2 ? B GLU 113 OE2 41 1 Y 1 B GLN 131 ? CD ? B GLN 114 CD 42 1 Y 1 B GLN 131 ? OE1 ? B GLN 114 OE1 43 1 Y 1 B GLN 131 ? NE2 ? B GLN 114 NE2 44 1 Y 1 B LYS 157 ? CE ? B LYS 140 CE 45 1 Y 1 B LYS 157 ? NZ ? B LYS 140 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 18 ? A ILE 1 2 1 Y 1 A VAL 19 ? A VAL 2 3 1 Y 1 B ILE 18 ? B ILE 1 4 1 Y 1 B VAL 19 ? B VAL 2 5 1 Y 1 B THR 20 ? B THR 3 6 1 Y 1 B GLN 21 ? B GLN 4 7 1 Y 1 B THR 22 ? B THR 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'YTTRIUM (III) ION' YT3 3 'CHLORIDE ION' CL 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 YT3 1 1 1 YT3 YT3 A . D 2 YT3 1 2 2 YT3 YT3 A . E 3 CL 1 5 5 CL CL A . F 3 CL 1 6 6 CL CL A . G 2 YT3 1 3 3 YT3 YT3 B . H 2 YT3 1 4 4 YT3 YT3 B . I 4 HOH 1 3 3 HOH HOH A . I 4 HOH 2 4 4 HOH HOH A . I 4 HOH 3 8 8 HOH HOH A . I 4 HOH 4 10 10 HOH HOH A . I 4 HOH 5 11 11 HOH HOH A . I 4 HOH 6 12 12 HOH HOH A . I 4 HOH 7 13 13 HOH HOH A . I 4 HOH 8 14 14 HOH HOH A . I 4 HOH 9 16 16 HOH HOH A . I 4 HOH 10 179 1 HOH HOH A . I 4 HOH 11 180 2 HOH HOH A . I 4 HOH 12 181 5 HOH HOH A . I 4 HOH 13 182 22 HOH HOH A . I 4 HOH 14 183 23 HOH HOH A . I 4 HOH 15 184 32 HOH HOH A . I 4 HOH 16 185 35 HOH HOH A . I 4 HOH 17 186 37 HOH HOH A . I 4 HOH 18 187 40 HOH HOH A . I 4 HOH 19 188 41 HOH HOH A . I 4 HOH 20 189 44 HOH HOH A . I 4 HOH 21 190 49 HOH HOH A . I 4 HOH 22 191 50 HOH HOH A . I 4 HOH 23 192 53 HOH HOH A . I 4 HOH 24 193 54 HOH HOH A . J 4 HOH 1 15 15 HOH HOH B . J 4 HOH 2 179 19 HOH HOH B . J 4 HOH 3 180 20 HOH HOH B . J 4 HOH 4 181 21 HOH HOH B . J 4 HOH 5 182 27 HOH HOH B . J 4 HOH 6 183 28 HOH HOH B . J 4 HOH 7 184 29 HOH HOH B . J 4 HOH 8 185 31 HOH HOH B . J 4 HOH 9 186 36 HOH HOH B . J 4 HOH 10 187 38 HOH HOH B . J 4 HOH 11 188 42 HOH HOH B . J 4 HOH 12 189 46 HOH HOH B . J 4 HOH 13 190 48 HOH HOH B . J 4 HOH 14 191 51 HOH HOH B . J 4 HOH 15 192 52 HOH HOH B . #