data_3PKY # _entry.id 3PKY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3PKY pdb_00003pky 10.2210/pdb3pky/pdb NDB NA0859 ? ? RCSB RCSB062499 ? ? WWPDB D_1000062499 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-02-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.value' 21 3 'Structure model' '_struct_conn.pdbx_dist_value' 22 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 3 'Structure model' '_struct_ref_seq_dif.details' 36 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3PKY _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-11-12 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Brissett, N.C.' 1 'Fox, G.C.' 2 'Pitcher, R.S.' 3 'Doherty, A.J.' 4 # _citation.id primary _citation.title 'Structure of a Preternary Complex Involving a Prokaryotic NHEJ DNA Polymerase.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 41 _citation.page_first 221 _citation.page_last 231 _citation.year 2011 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21255731 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2010.12.026 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Brissett, N.C.' 1 ? primary 'Martin, M.J.' 2 ? primary 'Pitcher, R.S.' 3 ? primary 'Bianchi, J.' 4 ? primary 'Juarez, R.' 5 ? primary 'Green, A.J.' 6 ? primary 'Fox, G.C.' 7 ? primary 'Blanco, L.' 8 ? primary 'Doherty, A.J.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative DNA ligase-like protein' 32825.148 2 2.7.7.- ? ? ? 2 polymer syn ;DNA 5'-D(P*GP*CP*GP*GP*C)-3' ; 1521.024 1 ? ? ? ? 3 polymer syn ;DNA 5'-D(*G*CP*CP*GP*CP*AP*AP*CP*GP*CP*AP*CP*G)-3' ; 3946.577 1 ? ? ? ? 4 non-polymer syn ;URIDINE 5'-TRIPHOSPHATE ; 484.141 2 ? ? ? ? 5 non-polymer syn 'MANGANESE (II) ION' 54.938 4 ? ? ? ? 6 water nat water 18.015 47 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMGSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQPAFFEKQLALSAPPWLS RATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEPGSGELNPGPATRLVFDLDPGEGVMMAQLAEVARAVR DLLADIGLVTFPVTSGSKGLHLYTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTT IAPYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTRY ; ;GSHMGSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQPAFFEKQLALSAPPWLS RATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEPGSGELNPGPATRLVFDLDPGEGVMMAQLAEVARAVR DLLADIGLVTFPVTSGSKGLHLYTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTT IAPYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTRY ; A,B ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DG)(DC)' GCGGC C ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DG)(DC)(DA)(DA)(DC)(DG)(DC)(DA)(DC)(DG)' GCCGCAACGCACG D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 ;URIDINE 5'-TRIPHOSPHATE ; UTP 5 'MANGANESE (II) ION' MN 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 SER n 1 7 ALA n 1 8 SER n 1 9 GLU n 1 10 GLN n 1 11 ARG n 1 12 VAL n 1 13 THR n 1 14 LEU n 1 15 THR n 1 16 ASN n 1 17 ALA n 1 18 ASP n 1 19 LYS n 1 20 VAL n 1 21 LEU n 1 22 TYR n 1 23 PRO n 1 24 ALA n 1 25 THR n 1 26 GLY n 1 27 THR n 1 28 THR n 1 29 LYS n 1 30 SER n 1 31 ASP n 1 32 ILE n 1 33 PHE n 1 34 ASP n 1 35 TYR n 1 36 TYR n 1 37 ALA n 1 38 GLY n 1 39 VAL n 1 40 ALA n 1 41 GLU n 1 42 VAL n 1 43 MET n 1 44 LEU n 1 45 GLY n 1 46 HIS n 1 47 ILE n 1 48 ALA n 1 49 GLY n 1 50 ARG n 1 51 PRO n 1 52 ALA n 1 53 THR n 1 54 ARG n 1 55 LYS n 1 56 ARG n 1 57 TRP n 1 58 PRO n 1 59 ASN n 1 60 GLY n 1 61 VAL n 1 62 ASP n 1 63 GLN n 1 64 PRO n 1 65 ALA n 1 66 PHE n 1 67 PHE n 1 68 GLU n 1 69 LYS n 1 70 GLN n 1 71 LEU n 1 72 ALA n 1 73 LEU n 1 74 SER n 1 75 ALA n 1 76 PRO n 1 77 PRO n 1 78 TRP n 1 79 LEU n 1 80 SER n 1 81 ARG n 1 82 ALA n 1 83 THR n 1 84 VAL n 1 85 ALA n 1 86 HIS n 1 87 ARG n 1 88 SER n 1 89 GLY n 1 90 THR n 1 91 THR n 1 92 THR n 1 93 TYR n 1 94 PRO n 1 95 ILE n 1 96 ILE n 1 97 ASP n 1 98 SER n 1 99 ALA n 1 100 THR n 1 101 GLY n 1 102 LEU n 1 103 ALA n 1 104 TRP n 1 105 ILE n 1 106 ALA n 1 107 GLN n 1 108 GLN n 1 109 ALA n 1 110 ALA n 1 111 LEU n 1 112 GLU n 1 113 VAL n 1 114 HIS n 1 115 VAL n 1 116 PRO n 1 117 GLN n 1 118 TRP n 1 119 ARG n 1 120 PHE n 1 121 VAL n 1 122 ALA n 1 123 GLU n 1 124 PRO n 1 125 GLY n 1 126 SER n 1 127 GLY n 1 128 GLU n 1 129 LEU n 1 130 ASN n 1 131 PRO n 1 132 GLY n 1 133 PRO n 1 134 ALA n 1 135 THR n 1 136 ARG n 1 137 LEU n 1 138 VAL n 1 139 PHE n 1 140 ASP n 1 141 LEU n 1 142 ASP n 1 143 PRO n 1 144 GLY n 1 145 GLU n 1 146 GLY n 1 147 VAL n 1 148 MET n 1 149 MET n 1 150 ALA n 1 151 GLN n 1 152 LEU n 1 153 ALA n 1 154 GLU n 1 155 VAL n 1 156 ALA n 1 157 ARG n 1 158 ALA n 1 159 VAL n 1 160 ARG n 1 161 ASP n 1 162 LEU n 1 163 LEU n 1 164 ALA n 1 165 ASP n 1 166 ILE n 1 167 GLY n 1 168 LEU n 1 169 VAL n 1 170 THR n 1 171 PHE n 1 172 PRO n 1 173 VAL n 1 174 THR n 1 175 SER n 1 176 GLY n 1 177 SER n 1 178 LYS n 1 179 GLY n 1 180 LEU n 1 181 HIS n 1 182 LEU n 1 183 TYR n 1 184 THR n 1 185 PRO n 1 186 LEU n 1 187 ASP n 1 188 GLU n 1 189 PRO n 1 190 VAL n 1 191 SER n 1 192 SER n 1 193 ARG n 1 194 GLY n 1 195 ALA n 1 196 THR n 1 197 VAL n 1 198 LEU n 1 199 ALA n 1 200 LYS n 1 201 ARG n 1 202 VAL n 1 203 ALA n 1 204 GLN n 1 205 ARG n 1 206 LEU n 1 207 GLU n 1 208 GLN n 1 209 ALA n 1 210 MET n 1 211 PRO n 1 212 ALA n 1 213 LEU n 1 214 VAL n 1 215 THR n 1 216 SER n 1 217 THR n 1 218 MET n 1 219 THR n 1 220 LYS n 1 221 SER n 1 222 LEU n 1 223 ARG n 1 224 ALA n 1 225 GLY n 1 226 LYS n 1 227 VAL n 1 228 PHE n 1 229 VAL n 1 230 ASP n 1 231 TRP n 1 232 SER n 1 233 GLN n 1 234 ASN n 1 235 SER n 1 236 GLY n 1 237 SER n 1 238 LYS n 1 239 THR n 1 240 THR n 1 241 ILE n 1 242 ALA n 1 243 PRO n 1 244 TYR n 1 245 SER n 1 246 LEU n 1 247 ARG n 1 248 GLY n 1 249 ARG n 1 250 THR n 1 251 HIS n 1 252 PRO n 1 253 THR n 1 254 VAL n 1 255 ALA n 1 256 ALA n 1 257 PRO n 1 258 ARG n 1 259 THR n 1 260 TRP n 1 261 ALA n 1 262 GLU n 1 263 LEU n 1 264 ASP n 1 265 ASP n 1 266 PRO n 1 267 ALA n 1 268 LEU n 1 269 ARG n 1 270 GLN n 1 271 LEU n 1 272 SER n 1 273 TYR n 1 274 ASP n 1 275 GLU n 1 276 VAL n 1 277 LEU n 1 278 THR n 1 279 ARG n 1 280 ILE n 1 281 ALA n 1 282 ARG n 1 283 ASP n 1 284 GLY n 1 285 ASP n 1 286 LEU n 1 287 LEU n 1 288 GLU n 1 289 ARG n 1 290 LEU n 1 291 ASP n 1 292 ALA n 1 293 ASP n 1 294 ALA n 1 295 PRO n 1 296 VAL n 1 297 ALA n 1 298 ASP n 1 299 ARG n 1 300 LEU n 1 301 THR n 1 302 ARG n 1 303 TYR n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DG n 2 5 DC n 3 1 DG n 3 2 DC n 3 3 DC n 3 4 DG n 3 5 DC n 3 6 DA n 3 7 DA n 3 8 DC n 3 9 DG n 3 10 DC n 3 11 DA n 3 12 DC n 3 13 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MT0965, MTCY08D9.01c, MTCY10D7.36c, Rv0938' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain H37RV _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UTP non-polymer . ;URIDINE 5'-TRIPHOSPHATE ; ? 'C9 H15 N2 O15 P3' 484.141 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLY 5 2 ? ? ? A . n A 1 6 SER 6 3 ? ? ? A . n A 1 7 ALA 7 4 ? ? ? A . n A 1 8 SER 8 5 ? ? ? A . n A 1 9 GLU 9 6 6 GLU GLU A . n A 1 10 GLN 10 7 7 GLN GLN A . n A 1 11 ARG 11 8 8 ARG ARG A . n A 1 12 VAL 12 9 9 VAL VAL A . n A 1 13 THR 13 10 10 THR THR A . n A 1 14 LEU 14 11 11 LEU LEU A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 ASN 16 13 13 ASN ASN A . n A 1 17 ALA 17 14 14 ALA ALA A . n A 1 18 ASP 18 15 15 ASP ASP A . n A 1 19 LYS 19 16 16 LYS LYS A . n A 1 20 VAL 20 17 17 VAL VAL A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 TYR 22 19 19 TYR TYR A . n A 1 23 PRO 23 20 20 PRO PRO A . n A 1 24 ALA 24 21 21 ALA ALA A . n A 1 25 THR 25 22 22 THR THR A . n A 1 26 GLY 26 23 23 GLY GLY A . n A 1 27 THR 27 24 24 THR THR A . n A 1 28 THR 28 25 25 THR THR A . n A 1 29 LYS 29 26 26 LYS LYS A . n A 1 30 SER 30 27 27 SER SER A . n A 1 31 ASP 31 28 28 ASP ASP A . n A 1 32 ILE 32 29 29 ILE ILE A . n A 1 33 PHE 33 30 30 PHE PHE A . n A 1 34 ASP 34 31 31 ASP ASP A . n A 1 35 TYR 35 32 32 TYR TYR A . n A 1 36 TYR 36 33 33 TYR TYR A . n A 1 37 ALA 37 34 34 ALA ALA A . n A 1 38 GLY 38 35 35 GLY GLY A . n A 1 39 VAL 39 36 36 VAL VAL A . n A 1 40 ALA 40 37 37 ALA ALA A . n A 1 41 GLU 41 38 38 GLU GLU A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 MET 43 40 40 MET MET A . n A 1 44 LEU 44 41 41 LEU LEU A . n A 1 45 GLY 45 42 42 GLY GLY A . n A 1 46 HIS 46 43 43 HIS HIS A . n A 1 47 ILE 47 44 44 ILE ILE A . n A 1 48 ALA 48 45 45 ALA ALA A . n A 1 49 GLY 49 46 46 GLY GLY A . n A 1 50 ARG 50 47 47 ARG ARG A . n A 1 51 PRO 51 48 48 PRO PRO A . n A 1 52 ALA 52 49 49 ALA ALA A . n A 1 53 THR 53 50 50 THR THR A . n A 1 54 ARG 54 51 51 ARG ARG A . n A 1 55 LYS 55 52 52 LYS LYS A . n A 1 56 ARG 56 53 53 ARG ARG A . n A 1 57 TRP 57 54 54 TRP TRP A . n A 1 58 PRO 58 55 55 PRO PRO A . n A 1 59 ASN 59 56 56 ASN ASN A . n A 1 60 GLY 60 57 57 GLY GLY A . n A 1 61 VAL 61 58 58 VAL VAL A . n A 1 62 ASP 62 59 59 ASP ASP A . n A 1 63 GLN 63 60 60 GLN GLN A . n A 1 64 PRO 64 61 61 PRO PRO A . n A 1 65 ALA 65 62 62 ALA ALA A . n A 1 66 PHE 66 63 63 PHE PHE A . n A 1 67 PHE 67 64 64 PHE PHE A . n A 1 68 GLU 68 65 65 GLU GLU A . n A 1 69 LYS 69 66 66 LYS LYS A . n A 1 70 GLN 70 67 67 GLN GLN A . n A 1 71 LEU 71 68 68 LEU LEU A . n A 1 72 ALA 72 69 69 ALA ALA A . n A 1 73 LEU 73 70 70 LEU LEU A . n A 1 74 SER 74 71 71 SER SER A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 PRO 76 73 73 PRO PRO A . n A 1 77 PRO 77 74 74 PRO PRO A . n A 1 78 TRP 78 75 75 TRP TRP A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 SER 80 77 77 SER SER A . n A 1 81 ARG 81 78 78 ARG ARG A . n A 1 82 ALA 82 79 79 ALA ALA A . n A 1 83 THR 83 80 80 THR THR A . n A 1 84 VAL 84 81 81 VAL VAL A . n A 1 85 ALA 85 82 82 ALA ALA A . n A 1 86 HIS 86 83 83 HIS HIS A . n A 1 87 ARG 87 84 84 ARG ARG A . n A 1 88 SER 88 85 85 SER SER A . n A 1 89 GLY 89 86 86 GLY GLY A . n A 1 90 THR 90 87 87 THR THR A . n A 1 91 THR 91 88 88 THR THR A . n A 1 92 THR 92 89 89 THR THR A . n A 1 93 TYR 93 90 90 TYR TYR A . n A 1 94 PRO 94 91 91 PRO PRO A . n A 1 95 ILE 95 92 92 ILE ILE A . n A 1 96 ILE 96 93 93 ILE ILE A . n A 1 97 ASP 97 94 94 ASP ASP A . n A 1 98 SER 98 95 95 SER SER A . n A 1 99 ALA 99 96 96 ALA ALA A . n A 1 100 THR 100 97 97 THR THR A . n A 1 101 GLY 101 98 98 GLY GLY A . n A 1 102 LEU 102 99 99 LEU LEU A . n A 1 103 ALA 103 100 100 ALA ALA A . n A 1 104 TRP 104 101 101 TRP TRP A . n A 1 105 ILE 105 102 102 ILE ILE A . n A 1 106 ALA 106 103 103 ALA ALA A . n A 1 107 GLN 107 104 104 GLN GLN A . n A 1 108 GLN 108 105 105 GLN GLN A . n A 1 109 ALA 109 106 106 ALA ALA A . n A 1 110 ALA 110 107 107 ALA ALA A . n A 1 111 LEU 111 108 108 LEU LEU A . n A 1 112 GLU 112 109 109 GLU GLU A . n A 1 113 VAL 113 110 110 VAL VAL A . n A 1 114 HIS 114 111 111 HIS HIS A . n A 1 115 VAL 115 112 112 VAL VAL A . n A 1 116 PRO 116 113 113 PRO PRO A . n A 1 117 GLN 117 114 114 GLN GLN A . n A 1 118 TRP 118 115 115 TRP TRP A . n A 1 119 ARG 119 116 116 ARG ARG A . n A 1 120 PHE 120 117 117 PHE PHE A . n A 1 121 VAL 121 118 118 VAL VAL A . n A 1 122 ALA 122 119 119 ALA ALA A . n A 1 123 GLU 123 120 120 GLU GLU A . n A 1 124 PRO 124 121 121 PRO PRO A . n A 1 125 GLY 125 122 122 GLY GLY A . n A 1 126 SER 126 123 123 SER SER A . n A 1 127 GLY 127 124 124 GLY GLY A . n A 1 128 GLU 128 125 125 GLU GLU A . n A 1 129 LEU 129 126 126 LEU LEU A . n A 1 130 ASN 130 127 127 ASN ASN A . n A 1 131 PRO 131 128 128 PRO PRO A . n A 1 132 GLY 132 129 129 GLY GLY A . n A 1 133 PRO 133 130 130 PRO PRO A . n A 1 134 ALA 134 131 131 ALA ALA A . n A 1 135 THR 135 132 132 THR THR A . n A 1 136 ARG 136 133 133 ARG ARG A . n A 1 137 LEU 137 134 134 LEU LEU A . n A 1 138 VAL 138 135 135 VAL VAL A . n A 1 139 PHE 139 136 136 PHE PHE A . n A 1 140 ASP 140 137 137 ASP ASP A . n A 1 141 LEU 141 138 138 LEU LEU A . n A 1 142 ASP 142 139 139 ASP ASP A . n A 1 143 PRO 143 140 140 PRO PRO A . n A 1 144 GLY 144 141 141 GLY GLY A . n A 1 145 GLU 145 142 142 GLU GLU A . n A 1 146 GLY 146 143 143 GLY GLY A . n A 1 147 VAL 147 144 144 VAL VAL A . n A 1 148 MET 148 145 145 MET MET A . n A 1 149 MET 149 146 146 MET MET A . n A 1 150 ALA 150 147 147 ALA ALA A . n A 1 151 GLN 151 148 148 GLN GLN A . n A 1 152 LEU 152 149 149 LEU LEU A . n A 1 153 ALA 153 150 150 ALA ALA A . n A 1 154 GLU 154 151 151 GLU GLU A . n A 1 155 VAL 155 152 152 VAL VAL A . n A 1 156 ALA 156 153 153 ALA ALA A . n A 1 157 ARG 157 154 154 ARG ARG A . n A 1 158 ALA 158 155 155 ALA ALA A . n A 1 159 VAL 159 156 156 VAL VAL A . n A 1 160 ARG 160 157 157 ARG ARG A . n A 1 161 ASP 161 158 158 ASP ASP A . n A 1 162 LEU 162 159 159 LEU LEU A . n A 1 163 LEU 163 160 160 LEU LEU A . n A 1 164 ALA 164 161 161 ALA ALA A . n A 1 165 ASP 165 162 162 ASP ASP A . n A 1 166 ILE 166 163 163 ILE ILE A . n A 1 167 GLY 167 164 164 GLY GLY A . n A 1 168 LEU 168 165 165 LEU LEU A . n A 1 169 VAL 169 166 166 VAL VAL A . n A 1 170 THR 170 167 167 THR THR A . n A 1 171 PHE 171 168 168 PHE PHE A . n A 1 172 PRO 172 169 169 PRO PRO A . n A 1 173 VAL 173 170 170 VAL VAL A . n A 1 174 THR 174 171 171 THR THR A . n A 1 175 SER 175 172 172 SER SER A . n A 1 176 GLY 176 173 173 GLY GLY A . n A 1 177 SER 177 174 174 SER SER A . n A 1 178 LYS 178 175 175 LYS LYS A . n A 1 179 GLY 179 176 176 GLY GLY A . n A 1 180 LEU 180 177 177 LEU LEU A . n A 1 181 HIS 181 178 178 HIS HIS A . n A 1 182 LEU 182 179 179 LEU LEU A . n A 1 183 TYR 183 180 180 TYR TYR A . n A 1 184 THR 184 181 181 THR THR A . n A 1 185 PRO 185 182 182 PRO PRO A . n A 1 186 LEU 186 183 183 LEU LEU A . n A 1 187 ASP 187 184 184 ASP ASP A . n A 1 188 GLU 188 185 185 GLU GLU A . n A 1 189 PRO 189 186 186 PRO PRO A . n A 1 190 VAL 190 187 187 VAL VAL A . n A 1 191 SER 191 188 188 SER SER A . n A 1 192 SER 192 189 189 SER SER A . n A 1 193 ARG 193 190 190 ARG ARG A . n A 1 194 GLY 194 191 191 GLY GLY A . n A 1 195 ALA 195 192 192 ALA ALA A . n A 1 196 THR 196 193 193 THR THR A . n A 1 197 VAL 197 194 194 VAL VAL A . n A 1 198 LEU 198 195 195 LEU LEU A . n A 1 199 ALA 199 196 196 ALA ALA A . n A 1 200 LYS 200 197 197 LYS LYS A . n A 1 201 ARG 201 198 198 ARG ARG A . n A 1 202 VAL 202 199 199 VAL VAL A . n A 1 203 ALA 203 200 200 ALA ALA A . n A 1 204 GLN 204 201 201 GLN GLN A . n A 1 205 ARG 205 202 202 ARG ARG A . n A 1 206 LEU 206 203 203 LEU LEU A . n A 1 207 GLU 207 204 204 GLU GLU A . n A 1 208 GLN 208 205 205 GLN GLN A . n A 1 209 ALA 209 206 206 ALA ALA A . n A 1 210 MET 210 207 207 MET MET A . n A 1 211 PRO 211 208 208 PRO PRO A . n A 1 212 ALA 212 209 209 ALA ALA A . n A 1 213 LEU 213 210 210 LEU LEU A . n A 1 214 VAL 214 211 211 VAL VAL A . n A 1 215 THR 215 212 212 THR THR A . n A 1 216 SER 216 213 213 SER SER A . n A 1 217 THR 217 214 214 THR THR A . n A 1 218 MET 218 215 215 MET MET A . n A 1 219 THR 219 216 216 THR THR A . n A 1 220 LYS 220 217 217 LYS LYS A . n A 1 221 SER 221 218 218 SER SER A . n A 1 222 LEU 222 219 219 LEU LEU A . n A 1 223 ARG 223 220 220 ARG ARG A . n A 1 224 ALA 224 221 221 ALA ALA A . n A 1 225 GLY 225 222 222 GLY GLY A . n A 1 226 LYS 226 223 223 LYS LYS A . n A 1 227 VAL 227 224 224 VAL VAL A . n A 1 228 PHE 228 225 225 PHE PHE A . n A 1 229 VAL 229 226 226 VAL VAL A . n A 1 230 ASP 230 227 227 ASP ASP A . n A 1 231 TRP 231 228 228 TRP TRP A . n A 1 232 SER 232 229 229 SER SER A . n A 1 233 GLN 233 230 230 GLN GLN A . n A 1 234 ASN 234 231 231 ASN ASN A . n A 1 235 SER 235 232 232 SER SER A . n A 1 236 GLY 236 233 233 GLY GLY A . n A 1 237 SER 237 234 234 SER SER A . n A 1 238 LYS 238 235 235 LYS LYS A . n A 1 239 THR 239 236 236 THR THR A . n A 1 240 THR 240 237 237 THR THR A . n A 1 241 ILE 241 238 238 ILE ILE A . n A 1 242 ALA 242 239 239 ALA ALA A . n A 1 243 PRO 243 240 240 PRO PRO A . n A 1 244 TYR 244 241 241 TYR TYR A . n A 1 245 SER 245 242 242 SER SER A . n A 1 246 LEU 246 243 243 LEU LEU A . n A 1 247 ARG 247 244 244 ARG ARG A . n A 1 248 GLY 248 245 245 GLY GLY A . n A 1 249 ARG 249 246 246 ARG ARG A . n A 1 250 THR 250 247 247 THR THR A . n A 1 251 HIS 251 248 248 HIS HIS A . n A 1 252 PRO 252 249 249 PRO PRO A . n A 1 253 THR 253 250 250 THR THR A . n A 1 254 VAL 254 251 251 VAL VAL A . n A 1 255 ALA 255 252 252 ALA ALA A . n A 1 256 ALA 256 253 253 ALA ALA A . n A 1 257 PRO 257 254 254 PRO PRO A . n A 1 258 ARG 258 255 255 ARG ARG A . n A 1 259 THR 259 256 256 THR THR A . n A 1 260 TRP 260 257 257 TRP TRP A . n A 1 261 ALA 261 258 258 ALA ALA A . n A 1 262 GLU 262 259 259 GLU GLU A . n A 1 263 LEU 263 260 260 LEU LEU A . n A 1 264 ASP 264 261 261 ASP ASP A . n A 1 265 ASP 265 262 262 ASP ASP A . n A 1 266 PRO 266 263 263 PRO PRO A . n A 1 267 ALA 267 264 264 ALA ALA A . n A 1 268 LEU 268 265 265 LEU LEU A . n A 1 269 ARG 269 266 266 ARG ARG A . n A 1 270 GLN 270 267 267 GLN GLN A . n A 1 271 LEU 271 268 268 LEU LEU A . n A 1 272 SER 272 269 269 SER SER A . n A 1 273 TYR 273 270 270 TYR TYR A . n A 1 274 ASP 274 271 271 ASP ASP A . n A 1 275 GLU 275 272 272 GLU GLU A . n A 1 276 VAL 276 273 273 VAL VAL A . n A 1 277 LEU 277 274 274 LEU LEU A . n A 1 278 THR 278 275 275 THR THR A . n A 1 279 ARG 279 276 276 ARG ARG A . n A 1 280 ILE 280 277 277 ILE ILE A . n A 1 281 ALA 281 278 278 ALA ALA A . n A 1 282 ARG 282 279 279 ARG ARG A . n A 1 283 ASP 283 280 280 ASP ASP A . n A 1 284 GLY 284 281 281 GLY GLY A . n A 1 285 ASP 285 282 282 ASP ASP A . n A 1 286 LEU 286 283 283 LEU LEU A . n A 1 287 LEU 287 284 284 LEU LEU A . n A 1 288 GLU 288 285 285 GLU GLU A . n A 1 289 ARG 289 286 286 ARG ARG A . n A 1 290 LEU 290 287 287 LEU LEU A . n A 1 291 ASP 291 288 288 ASP ASP A . n A 1 292 ALA 292 289 289 ALA ALA A . n A 1 293 ASP 293 290 290 ASP ASP A . n A 1 294 ALA 294 291 291 ALA ALA A . n A 1 295 PRO 295 292 292 PRO PRO A . n A 1 296 VAL 296 293 ? ? ? A . n A 1 297 ALA 297 294 ? ? ? A . n A 1 298 ASP 298 295 ? ? ? A . n A 1 299 ARG 299 296 ? ? ? A . n A 1 300 LEU 300 297 ? ? ? A . n A 1 301 THR 301 298 ? ? ? A . n A 1 302 ARG 302 299 ? ? ? A . n A 1 303 TYR 303 300 ? ? ? A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 SER 2 -1 ? ? ? B . n B 1 3 HIS 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 GLY 5 2 ? ? ? B . n B 1 6 SER 6 3 ? ? ? B . n B 1 7 ALA 7 4 ? ? ? B . n B 1 8 SER 8 5 ? ? ? B . n B 1 9 GLU 9 6 ? ? ? B . n B 1 10 GLN 10 7 7 GLN GLN B . n B 1 11 ARG 11 8 8 ARG ARG B . n B 1 12 VAL 12 9 9 VAL VAL B . n B 1 13 THR 13 10 10 THR THR B . n B 1 14 LEU 14 11 11 LEU LEU B . n B 1 15 THR 15 12 12 THR THR B . n B 1 16 ASN 16 13 13 ASN ASN B . n B 1 17 ALA 17 14 14 ALA ALA B . n B 1 18 ASP 18 15 15 ASP ASP B . n B 1 19 LYS 19 16 16 LYS LYS B . n B 1 20 VAL 20 17 17 VAL VAL B . n B 1 21 LEU 21 18 18 LEU LEU B . n B 1 22 TYR 22 19 19 TYR TYR B . n B 1 23 PRO 23 20 20 PRO PRO B . n B 1 24 ALA 24 21 21 ALA ALA B . n B 1 25 THR 25 22 22 THR THR B . n B 1 26 GLY 26 23 23 GLY GLY B . n B 1 27 THR 27 24 24 THR THR B . n B 1 28 THR 28 25 25 THR THR B . n B 1 29 LYS 29 26 26 LYS LYS B . n B 1 30 SER 30 27 27 SER SER B . n B 1 31 ASP 31 28 28 ASP ASP B . n B 1 32 ILE 32 29 29 ILE ILE B . n B 1 33 PHE 33 30 30 PHE PHE B . n B 1 34 ASP 34 31 31 ASP ASP B . n B 1 35 TYR 35 32 32 TYR TYR B . n B 1 36 TYR 36 33 33 TYR TYR B . n B 1 37 ALA 37 34 34 ALA ALA B . n B 1 38 GLY 38 35 35 GLY GLY B . n B 1 39 VAL 39 36 36 VAL VAL B . n B 1 40 ALA 40 37 37 ALA ALA B . n B 1 41 GLU 41 38 38 GLU GLU B . n B 1 42 VAL 42 39 39 VAL VAL B . n B 1 43 MET 43 40 40 MET MET B . n B 1 44 LEU 44 41 41 LEU LEU B . n B 1 45 GLY 45 42 42 GLY GLY B . n B 1 46 HIS 46 43 43 HIS HIS B . n B 1 47 ILE 47 44 44 ILE ILE B . n B 1 48 ALA 48 45 45 ALA ALA B . n B 1 49 GLY 49 46 46 GLY GLY B . n B 1 50 ARG 50 47 47 ARG ARG B . n B 1 51 PRO 51 48 48 PRO PRO B . n B 1 52 ALA 52 49 49 ALA ALA B . n B 1 53 THR 53 50 50 THR THR B . n B 1 54 ARG 54 51 51 ARG ARG B . n B 1 55 LYS 55 52 52 LYS LYS B . n B 1 56 ARG 56 53 53 ARG ARG B . n B 1 57 TRP 57 54 54 TRP TRP B . n B 1 58 PRO 58 55 55 PRO PRO B . n B 1 59 ASN 59 56 56 ASN ASN B . n B 1 60 GLY 60 57 57 GLY GLY B . n B 1 61 VAL 61 58 58 VAL VAL B . n B 1 62 ASP 62 59 59 ASP ASP B . n B 1 63 GLN 63 60 60 GLN GLN B . n B 1 64 PRO 64 61 61 PRO PRO B . n B 1 65 ALA 65 62 62 ALA ALA B . n B 1 66 PHE 66 63 63 PHE PHE B . n B 1 67 PHE 67 64 64 PHE PHE B . n B 1 68 GLU 68 65 65 GLU GLU B . n B 1 69 LYS 69 66 66 LYS LYS B . n B 1 70 GLN 70 67 67 GLN GLN B . n B 1 71 LEU 71 68 68 LEU LEU B . n B 1 72 ALA 72 69 69 ALA ALA B . n B 1 73 LEU 73 70 70 LEU LEU B . n B 1 74 SER 74 71 71 SER SER B . n B 1 75 ALA 75 72 72 ALA ALA B . n B 1 76 PRO 76 73 73 PRO PRO B . n B 1 77 PRO 77 74 74 PRO PRO B . n B 1 78 TRP 78 75 75 TRP TRP B . n B 1 79 LEU 79 76 76 LEU LEU B . n B 1 80 SER 80 77 77 SER SER B . n B 1 81 ARG 81 78 78 ARG ARG B . n B 1 82 ALA 82 79 79 ALA ALA B . n B 1 83 THR 83 80 80 THR THR B . n B 1 84 VAL 84 81 81 VAL VAL B . n B 1 85 ALA 85 82 82 ALA ALA B . n B 1 86 HIS 86 83 83 HIS HIS B . n B 1 87 ARG 87 84 84 ARG ARG B . n B 1 88 SER 88 85 85 SER SER B . n B 1 89 GLY 89 86 86 GLY GLY B . n B 1 90 THR 90 87 87 THR THR B . n B 1 91 THR 91 88 88 THR THR B . n B 1 92 THR 92 89 89 THR THR B . n B 1 93 TYR 93 90 90 TYR TYR B . n B 1 94 PRO 94 91 91 PRO PRO B . n B 1 95 ILE 95 92 92 ILE ILE B . n B 1 96 ILE 96 93 93 ILE ILE B . n B 1 97 ASP 97 94 94 ASP ASP B . n B 1 98 SER 98 95 95 SER SER B . n B 1 99 ALA 99 96 96 ALA ALA B . n B 1 100 THR 100 97 97 THR THR B . n B 1 101 GLY 101 98 98 GLY GLY B . n B 1 102 LEU 102 99 99 LEU LEU B . n B 1 103 ALA 103 100 100 ALA ALA B . n B 1 104 TRP 104 101 101 TRP TRP B . n B 1 105 ILE 105 102 102 ILE ILE B . n B 1 106 ALA 106 103 103 ALA ALA B . n B 1 107 GLN 107 104 104 GLN GLN B . n B 1 108 GLN 108 105 105 GLN GLN B . n B 1 109 ALA 109 106 106 ALA ALA B . n B 1 110 ALA 110 107 107 ALA ALA B . n B 1 111 LEU 111 108 108 LEU LEU B . n B 1 112 GLU 112 109 109 GLU GLU B . n B 1 113 VAL 113 110 110 VAL VAL B . n B 1 114 HIS 114 111 111 HIS HIS B . n B 1 115 VAL 115 112 112 VAL VAL B . n B 1 116 PRO 116 113 113 PRO PRO B . n B 1 117 GLN 117 114 114 GLN GLN B . n B 1 118 TRP 118 115 115 TRP TRP B . n B 1 119 ARG 119 116 116 ARG ARG B . n B 1 120 PHE 120 117 117 PHE PHE B . n B 1 121 VAL 121 118 118 VAL VAL B . n B 1 122 ALA 122 119 119 ALA ALA B . n B 1 123 GLU 123 120 120 GLU GLU B . n B 1 124 PRO 124 121 121 PRO PRO B . n B 1 125 GLY 125 122 122 GLY GLY B . n B 1 126 SER 126 123 123 SER SER B . n B 1 127 GLY 127 124 124 GLY GLY B . n B 1 128 GLU 128 125 125 GLU GLU B . n B 1 129 LEU 129 126 126 LEU LEU B . n B 1 130 ASN 130 127 127 ASN ASN B . n B 1 131 PRO 131 128 128 PRO PRO B . n B 1 132 GLY 132 129 129 GLY GLY B . n B 1 133 PRO 133 130 130 PRO PRO B . n B 1 134 ALA 134 131 131 ALA ALA B . n B 1 135 THR 135 132 132 THR THR B . n B 1 136 ARG 136 133 133 ARG ARG B . n B 1 137 LEU 137 134 134 LEU LEU B . n B 1 138 VAL 138 135 135 VAL VAL B . n B 1 139 PHE 139 136 136 PHE PHE B . n B 1 140 ASP 140 137 137 ASP ASP B . n B 1 141 LEU 141 138 138 LEU LEU B . n B 1 142 ASP 142 139 139 ASP ASP B . n B 1 143 PRO 143 140 140 PRO PRO B . n B 1 144 GLY 144 141 141 GLY GLY B . n B 1 145 GLU 145 142 142 GLU GLU B . n B 1 146 GLY 146 143 143 GLY GLY B . n B 1 147 VAL 147 144 144 VAL VAL B . n B 1 148 MET 148 145 145 MET MET B . n B 1 149 MET 149 146 146 MET MET B . n B 1 150 ALA 150 147 147 ALA ALA B . n B 1 151 GLN 151 148 148 GLN GLN B . n B 1 152 LEU 152 149 149 LEU LEU B . n B 1 153 ALA 153 150 150 ALA ALA B . n B 1 154 GLU 154 151 151 GLU GLU B . n B 1 155 VAL 155 152 152 VAL VAL B . n B 1 156 ALA 156 153 153 ALA ALA B . n B 1 157 ARG 157 154 154 ARG ARG B . n B 1 158 ALA 158 155 155 ALA ALA B . n B 1 159 VAL 159 156 156 VAL VAL B . n B 1 160 ARG 160 157 157 ARG ARG B . n B 1 161 ASP 161 158 158 ASP ASP B . n B 1 162 LEU 162 159 159 LEU LEU B . n B 1 163 LEU 163 160 160 LEU LEU B . n B 1 164 ALA 164 161 161 ALA ALA B . n B 1 165 ASP 165 162 162 ASP ASP B . n B 1 166 ILE 166 163 163 ILE ILE B . n B 1 167 GLY 167 164 164 GLY GLY B . n B 1 168 LEU 168 165 165 LEU LEU B . n B 1 169 VAL 169 166 166 VAL VAL B . n B 1 170 THR 170 167 167 THR THR B . n B 1 171 PHE 171 168 168 PHE PHE B . n B 1 172 PRO 172 169 169 PRO PRO B . n B 1 173 VAL 173 170 170 VAL VAL B . n B 1 174 THR 174 171 171 THR THR B . n B 1 175 SER 175 172 172 SER SER B . n B 1 176 GLY 176 173 173 GLY GLY B . n B 1 177 SER 177 174 174 SER SER B . n B 1 178 LYS 178 175 175 LYS LYS B . n B 1 179 GLY 179 176 176 GLY GLY B . n B 1 180 LEU 180 177 177 LEU LEU B . n B 1 181 HIS 181 178 178 HIS HIS B . n B 1 182 LEU 182 179 179 LEU LEU B . n B 1 183 TYR 183 180 180 TYR TYR B . n B 1 184 THR 184 181 181 THR THR B . n B 1 185 PRO 185 182 182 PRO PRO B . n B 1 186 LEU 186 183 183 LEU LEU B . n B 1 187 ASP 187 184 184 ASP ASP B . n B 1 188 GLU 188 185 185 GLU GLU B . n B 1 189 PRO 189 186 186 PRO PRO B . n B 1 190 VAL 190 187 187 VAL VAL B . n B 1 191 SER 191 188 188 SER SER B . n B 1 192 SER 192 189 189 SER SER B . n B 1 193 ARG 193 190 190 ARG ARG B . n B 1 194 GLY 194 191 191 GLY GLY B . n B 1 195 ALA 195 192 192 ALA ALA B . n B 1 196 THR 196 193 193 THR THR B . n B 1 197 VAL 197 194 194 VAL VAL B . n B 1 198 LEU 198 195 195 LEU LEU B . n B 1 199 ALA 199 196 196 ALA ALA B . n B 1 200 LYS 200 197 197 LYS LYS B . n B 1 201 ARG 201 198 198 ARG ARG B . n B 1 202 VAL 202 199 199 VAL VAL B . n B 1 203 ALA 203 200 200 ALA ALA B . n B 1 204 GLN 204 201 201 GLN GLN B . n B 1 205 ARG 205 202 202 ARG ARG B . n B 1 206 LEU 206 203 203 LEU LEU B . n B 1 207 GLU 207 204 204 GLU GLU B . n B 1 208 GLN 208 205 205 GLN GLN B . n B 1 209 ALA 209 206 206 ALA ALA B . n B 1 210 MET 210 207 207 MET MET B . n B 1 211 PRO 211 208 208 PRO PRO B . n B 1 212 ALA 212 209 209 ALA ALA B . n B 1 213 LEU 213 210 210 LEU LEU B . n B 1 214 VAL 214 211 211 VAL VAL B . n B 1 215 THR 215 212 212 THR THR B . n B 1 216 SER 216 213 213 SER SER B . n B 1 217 THR 217 214 214 THR THR B . n B 1 218 MET 218 215 215 MET MET B . n B 1 219 THR 219 216 216 THR THR B . n B 1 220 LYS 220 217 217 LYS LYS B . n B 1 221 SER 221 218 218 SER SER B . n B 1 222 LEU 222 219 219 LEU LEU B . n B 1 223 ARG 223 220 220 ARG ARG B . n B 1 224 ALA 224 221 221 ALA ALA B . n B 1 225 GLY 225 222 222 GLY GLY B . n B 1 226 LYS 226 223 223 LYS LYS B . n B 1 227 VAL 227 224 224 VAL VAL B . n B 1 228 PHE 228 225 225 PHE PHE B . n B 1 229 VAL 229 226 226 VAL VAL B . n B 1 230 ASP 230 227 227 ASP ASP B . n B 1 231 TRP 231 228 228 TRP TRP B . n B 1 232 SER 232 229 229 SER SER B . n B 1 233 GLN 233 230 230 GLN GLN B . n B 1 234 ASN 234 231 231 ASN ASN B . n B 1 235 SER 235 232 232 SER SER B . n B 1 236 GLY 236 233 233 GLY GLY B . n B 1 237 SER 237 234 234 SER SER B . n B 1 238 LYS 238 235 235 LYS LYS B . n B 1 239 THR 239 236 236 THR THR B . n B 1 240 THR 240 237 237 THR THR B . n B 1 241 ILE 241 238 238 ILE ILE B . n B 1 242 ALA 242 239 239 ALA ALA B . n B 1 243 PRO 243 240 240 PRO PRO B . n B 1 244 TYR 244 241 241 TYR TYR B . n B 1 245 SER 245 242 242 SER SER B . n B 1 246 LEU 246 243 243 LEU LEU B . n B 1 247 ARG 247 244 244 ARG ARG B . n B 1 248 GLY 248 245 245 GLY GLY B . n B 1 249 ARG 249 246 246 ARG ARG B . n B 1 250 THR 250 247 247 THR THR B . n B 1 251 HIS 251 248 248 HIS HIS B . n B 1 252 PRO 252 249 249 PRO PRO B . n B 1 253 THR 253 250 250 THR THR B . n B 1 254 VAL 254 251 251 VAL VAL B . n B 1 255 ALA 255 252 252 ALA ALA B . n B 1 256 ALA 256 253 253 ALA ALA B . n B 1 257 PRO 257 254 254 PRO PRO B . n B 1 258 ARG 258 255 255 ARG ARG B . n B 1 259 THR 259 256 256 THR THR B . n B 1 260 TRP 260 257 257 TRP TRP B . n B 1 261 ALA 261 258 258 ALA ALA B . n B 1 262 GLU 262 259 259 GLU GLU B . n B 1 263 LEU 263 260 260 LEU LEU B . n B 1 264 ASP 264 261 261 ASP ASP B . n B 1 265 ASP 265 262 262 ASP ASP B . n B 1 266 PRO 266 263 263 PRO PRO B . n B 1 267 ALA 267 264 264 ALA ALA B . n B 1 268 LEU 268 265 265 LEU LEU B . n B 1 269 ARG 269 266 266 ARG ARG B . n B 1 270 GLN 270 267 267 GLN GLN B . n B 1 271 LEU 271 268 268 LEU LEU B . n B 1 272 SER 272 269 269 SER SER B . n B 1 273 TYR 273 270 270 TYR TYR B . n B 1 274 ASP 274 271 271 ASP ASP B . n B 1 275 GLU 275 272 272 GLU GLU B . n B 1 276 VAL 276 273 273 VAL VAL B . n B 1 277 LEU 277 274 274 LEU LEU B . n B 1 278 THR 278 275 275 THR THR B . n B 1 279 ARG 279 276 276 ARG ARG B . n B 1 280 ILE 280 277 277 ILE ILE B . n B 1 281 ALA 281 278 278 ALA ALA B . n B 1 282 ARG 282 279 279 ARG ARG B . n B 1 283 ASP 283 280 280 ASP ASP B . n B 1 284 GLY 284 281 281 GLY GLY B . n B 1 285 ASP 285 282 282 ASP ASP B . n B 1 286 LEU 286 283 283 LEU LEU B . n B 1 287 LEU 287 284 284 LEU LEU B . n B 1 288 GLU 288 285 285 GLU GLU B . n B 1 289 ARG 289 286 286 ARG ARG B . n B 1 290 LEU 290 287 287 LEU LEU B . n B 1 291 ASP 291 288 288 ASP ASP B . n B 1 292 ALA 292 289 289 ALA ALA B . n B 1 293 ASP 293 290 290 ASP ASP B . n B 1 294 ALA 294 291 291 ALA ALA B . n B 1 295 PRO 295 292 292 PRO PRO B . n B 1 296 VAL 296 293 ? ? ? B . n B 1 297 ALA 297 294 ? ? ? B . n B 1 298 ASP 298 295 ? ? ? B . n B 1 299 ARG 299 296 ? ? ? B . n B 1 300 LEU 300 297 ? ? ? B . n B 1 301 THR 301 298 ? ? ? B . n B 1 302 ARG 302 299 ? ? ? B . n B 1 303 TYR 303 300 ? ? ? B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DC 2 2 2 DC DC C . n C 2 3 DG 3 3 3 DG DG C . n C 2 4 DG 4 4 4 DG DG C . n C 2 5 DC 5 5 5 DC DC C . n D 3 1 DG 1 1 ? ? ? D . n D 3 2 DC 2 2 2 DC DC D . n D 3 3 DC 3 3 3 DC DC D . n D 3 4 DG 4 4 4 DG DG D . n D 3 5 DC 5 5 5 DC DC D . n D 3 6 DA 6 6 6 DA DA D . n D 3 7 DA 7 7 7 DA DA D . n D 3 8 DC 8 8 ? ? ? D . n D 3 9 DG 9 9 ? ? ? D . n D 3 10 DC 10 10 ? ? ? D . n D 3 11 DA 11 11 ? ? ? D . n D 3 12 DC 12 12 ? ? ? D . n D 3 13 DG 13 13 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 UTP 1 301 1 UTP UTP A . F 5 MN 1 302 1 MN MN A . G 5 MN 1 303 2 MN MN A . H 4 UTP 1 301 1 UTP UTP B . I 5 MN 1 302 1 MN MN B . J 5 MN 1 303 2 MN MN B . K 6 HOH 1 304 2 HOH HOH A . K 6 HOH 2 305 6 HOH HOH A . K 6 HOH 3 306 7 HOH HOH A . K 6 HOH 4 307 9 HOH HOH A . K 6 HOH 5 308 10 HOH HOH A . K 6 HOH 6 309 11 HOH HOH A . K 6 HOH 7 310 13 HOH HOH A . K 6 HOH 8 311 15 HOH HOH A . K 6 HOH 9 312 18 HOH HOH A . K 6 HOH 10 313 24 HOH HOH A . K 6 HOH 11 314 25 HOH HOH A . K 6 HOH 12 315 28 HOH HOH A . K 6 HOH 13 316 29 HOH HOH A . K 6 HOH 14 317 30 HOH HOH A . K 6 HOH 15 318 31 HOH HOH A . K 6 HOH 16 319 32 HOH HOH A . K 6 HOH 17 320 33 HOH HOH A . K 6 HOH 18 321 35 HOH HOH A . K 6 HOH 19 322 36 HOH HOH A . K 6 HOH 20 323 37 HOH HOH A . K 6 HOH 21 324 38 HOH HOH A . K 6 HOH 22 325 39 HOH HOH A . K 6 HOH 23 326 42 HOH HOH A . K 6 HOH 24 327 43 HOH HOH A . K 6 HOH 25 328 44 HOH HOH A . K 6 HOH 26 329 47 HOH HOH A . K 6 HOH 27 330 26 HOH HOH A . L 6 HOH 1 304 1 HOH HOH B . L 6 HOH 2 305 3 HOH HOH B . L 6 HOH 3 306 4 HOH HOH B . L 6 HOH 4 307 5 HOH HOH B . L 6 HOH 5 308 8 HOH HOH B . L 6 HOH 6 309 12 HOH HOH B . L 6 HOH 7 310 14 HOH HOH B . L 6 HOH 8 311 16 HOH HOH B . L 6 HOH 9 312 19 HOH HOH B . L 6 HOH 10 313 20 HOH HOH B . L 6 HOH 11 314 21 HOH HOH B . L 6 HOH 12 315 22 HOH HOH B . L 6 HOH 13 316 23 HOH HOH B . L 6 HOH 14 317 34 HOH HOH B . L 6 HOH 15 318 40 HOH HOH B . L 6 HOH 16 319 41 HOH HOH B . L 6 HOH 17 320 45 HOH HOH B . M 6 HOH 1 27 27 HOH HOH C . N 6 HOH 1 17 17 HOH HOH D . N 6 HOH 2 46 46 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LEU 18 ? CD1 ? A LEU 21 CD1 2 1 Y 0 A VAL 58 ? CG2 ? A VAL 61 CG2 3 1 Y 0 A LEU 76 ? CD1 ? A LEU 79 CD1 4 1 Y 0 A ALA 82 ? CB ? A ALA 85 CB 5 1 Y 0 A SER 85 ? OG ? A SER 88 OG 6 1 Y 0 A ALA 96 ? CB ? A ALA 99 CB 7 1 Y 0 A ALA 147 ? CB ? A ALA 150 CB 8 1 Y 0 A GLN 148 ? CG ? A GLN 151 CG 9 1 Y 0 A GLN 148 ? CD ? A GLN 151 CD 10 1 Y 0 A GLN 148 ? OE1 ? A GLN 151 OE1 11 1 Y 0 A GLN 148 ? NE2 ? A GLN 151 NE2 12 1 Y 0 A LYS 175 ? NZ ? A LYS 178 NZ 13 1 Y 0 A LEU 183 ? CD2 ? A LEU 186 CD2 14 1 Y 0 A LEU 210 ? CD1 ? A LEU 213 CD1 15 1 Y 0 A LEU 210 ? CD2 ? A LEU 213 CD2 16 1 Y 0 A THR 256 ? CG2 ? A THR 259 CG2 17 1 Y 0 A ALA 264 ? CB ? A ALA 267 CB 18 1 Y 0 A LEU 265 ? CD2 ? A LEU 268 CD2 19 1 Y 0 A THR 275 ? CG2 ? A THR 278 CG2 20 1 Y 0 A ILE 277 ? CG2 ? A ILE 280 CG2 21 1 Y 0 A ILE 277 ? CD1 ? A ILE 280 CD1 22 1 Y 0 A LEU 284 ? CD1 ? A LEU 287 CD1 23 1 Y 0 A LEU 284 ? CD2 ? A LEU 287 CD2 24 1 Y 0 B THR 10 ? CG2 ? B THR 13 CG2 25 1 Y 0 B LEU 11 ? CD1 ? B LEU 14 CD1 26 1 Y 0 B LEU 11 ? CD2 ? B LEU 14 CD2 27 1 Y 0 B THR 12 ? CG2 ? B THR 15 CG2 28 1 Y 0 B THR 25 ? CG2 ? B THR 28 CG2 29 1 Y 0 B LEU 41 ? CD1 ? B LEU 44 CD1 30 1 Y 0 B LEU 70 ? CD2 ? B LEU 73 CD2 31 1 Y 0 B ALA 82 ? CB ? B ALA 85 CB 32 1 Y 0 B SER 85 ? OG ? B SER 88 OG 33 1 Y 0 B ALA 96 ? CB ? B ALA 99 CB 34 1 Y 0 B VAL 144 ? CG2 ? B VAL 147 CG2 35 1 Y 0 B ALA 147 ? CB ? B ALA 150 CB 36 1 Y 0 B VAL 166 ? CG1 ? B VAL 169 CG1 37 1 Y 0 B VAL 166 ? CG2 ? B VAL 169 CG2 38 1 Y 0 B LYS 175 ? CE ? B LYS 178 CE 39 1 Y 0 B LYS 175 ? NZ ? B LYS 178 NZ 40 1 Y 0 B LEU 210 ? CD1 ? B LEU 213 CD1 41 1 Y 0 B LEU 210 ? CD2 ? B LEU 213 CD2 42 1 Y 0 B LEU 219 ? CD1 ? B LEU 222 CD1 43 1 Y 0 B ALA 221 ? CB ? B ALA 224 CB 44 1 Y 0 B ALA 264 ? CB ? B ALA 267 CB 45 1 Y 0 B THR 275 ? CG2 ? B THR 278 CG2 46 1 Y 0 B ILE 277 ? CD1 ? B ILE 280 CD1 47 1 Y 0 B LEU 284 ? CD1 ? B LEU 287 CD1 48 1 Y 0 B ALA 289 ? CB ? B ALA 292 CB 49 1 Y 1 D DC 2 ? P ? D DC 2 P 50 1 Y 1 D DC 2 ? OP1 ? D DC 2 OP1 51 1 Y 1 D DC 2 ? OP2 ? D DC 2 OP2 52 1 Y 1 D DC 2 ? "O5'" ? D DC 2 "O5'" 53 1 Y 1 D DC 2 ? "C5'" ? D DC 2 "C5'" 54 1 Y 1 D DC 2 ? "C4'" ? D DC 2 "C4'" 55 1 Y 1 D DC 2 ? "O4'" ? D DC 2 "O4'" 56 1 Y 1 D DC 2 ? "C2'" ? D DC 2 "C2'" 57 1 Y 1 D DC 2 ? "C1'" ? D DC 2 "C1'" 58 1 Y 1 D DC 2 ? N1 ? D DC 2 N1 59 1 Y 1 D DC 2 ? C2 ? D DC 2 C2 60 1 Y 1 D DC 2 ? O2 ? D DC 2 O2 61 1 Y 1 D DC 2 ? N3 ? D DC 2 N3 62 1 Y 1 D DC 2 ? C4 ? D DC 2 C4 63 1 Y 1 D DC 2 ? N4 ? D DC 2 N4 64 1 Y 1 D DC 2 ? C5 ? D DC 2 C5 65 1 Y 1 D DC 2 ? C6 ? D DC 2 C6 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 2.1.4 'Thu Nov 13 10:53:32 2008' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _cell.length_a 145.711 _cell.length_b 145.711 _cell.length_c 44.960 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3PKY _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 41' _symmetry.entry_id 3PKY _symmetry.Int_Tables_number 76 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3PKY _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.36 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 63.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 285 _exptl_crystal_grow.pdbx_details '20%(w/v)PEG 3350, 0.2 M Ammonium chloride, 10mM MnCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 285K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2007-06-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9787 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM16' _diffrn_source.pdbx_wavelength_list 0.9787 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM16 # _reflns.entry_id 3PKY _reflns.d_resolution_high 3.100 _reflns.d_resolution_low 48.57 _reflns.number_obs 17593 _reflns.pdbx_Rmerge_I_obs 0.161 _reflns.pdbx_netI_over_sigmaI 7.400 _reflns.pdbx_chi_squared 1.414 _reflns.pdbx_redundancy 5.500 _reflns.percent_possible_obs 99.400 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value 0.161 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 3.100 3.210 ? ? ? 0.679 ? ? 1.056 4.400 ? 1730 97.500 ? 1 3.210 3.340 ? ? ? 0.569 ? ? 1.168 5.600 ? 1700 99.900 ? 2 3.340 3.490 ? ? ? 0.409 ? ? 1.206 6.000 ? 1766 100.000 ? 3 3.490 3.680 ? ? ? 0.312 ? ? 1.244 6.000 ? 1751 100.000 ? 4 3.680 3.910 ? ? ? 0.240 ? ? 1.408 5.900 ? 1746 99.900 ? 5 3.910 4.210 ? ? ? 0.180 ? ? 1.353 5.800 ? 1749 100.000 ? 6 4.210 4.630 ? ? ? 0.136 ? ? 1.483 5.600 ? 1776 99.900 ? 7 4.630 5.300 ? ? ? 0.119 ? ? 1.542 5.500 ? 1752 99.900 ? 8 5.300 6.670 ? ? ? 0.112 ? ? 1.555 5.600 ? 1811 99.900 ? 9 6.670 50.000 ? ? ? 0.081 ? ? 2.134 4.900 ? 1812 97.100 ? 10 # _refine.entry_id 3PKY _refine.ls_d_res_high 3.1000 _refine.ls_d_res_low 48.57 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.3200 _refine.ls_number_reflns_obs 17577 _refine.ls_number_reflns_all 16680 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1936 _refine.ls_R_factor_R_work 0.1907 _refine.ls_wR_factor_R_work 0.1910 _refine.ls_R_factor_R_free 0.2476 _refine.ls_wR_factor_R_free 0.2430 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 897 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 71.3414 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.4200 _refine.aniso_B[2][2] -0.4200 _refine.aniso_B[3][3] 0.8500 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9400 _refine.correlation_coeff_Fo_to_Fc_free 0.8880 _refine.overall_SU_R_Cruickshank_DPI 0.3502 _refine.overall_SU_R_free 0.4150 _refine.pdbx_overall_ESU_R_Free 0.4150 _refine.overall_SU_ML 0.3200 _refine.overall_SU_B 37.0000 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8242 _refine.B_iso_max 162.990 _refine.B_iso_min 2.000 _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4377 _refine_hist.pdbx_number_atoms_nucleic_acid 209 _refine_hist.pdbx_number_atoms_ligand 62 _refine_hist.number_atoms_solvent 47 _refine_hist.number_atoms_total 4695 _refine_hist.d_res_high 3.1000 _refine_hist.d_res_low 48.57 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 4770 0.009 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 6567 1.297 2.037 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 571 6.105 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 183 33.324 22.678 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 698 18.122 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 42 19.050 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 753 0.077 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 3540 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2865 0.388 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 4622 0.738 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1905 1.012 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1945 1.831 4.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ordinal 'X-RAY DIFFRACTION' 1 1 'MEDIUM POSITIONAL' B 2172 0.210 0.500 ? ? ? ? ? ? 1 'X-RAY DIFFRACTION' 1 1 'MEDIUM THERMAL' B 2172 0.180 2.000 ? ? ? ? ? ? 2 # _refine_ls_shell.d_res_high 3.0980 _refine_ls_shell.d_res_low 3.1790 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.3300 _refine_ls_shell.number_reflns_R_work 1192 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2850 _refine_ls_shell.R_factor_R_free 0.3540 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1260 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 B 1 2 A # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 1 1 4 B 6 B 290 ? . . . . . . . . ? ? 1 2 1 4 A 6 A 290 ? . . . . . . . . ? ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3PKY _struct.title 'Polymerase Domain from Mycobacterium tuberculosis Ligase D in complex with DNA, UTP and Manganese.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PKY _struct_keywords.text 'protein-DNA complex, transferase-DNA complex, Nucleotide-binding, polymerase, primase, transferase, NHEJ' _struct_keywords.pdbx_keywords TRANSFERASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 6 ? L N N 6 ? M N N 6 ? N N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Y938_MYCTU P71571 1 ;MGSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQPAFFEKQLALSAPPWLSRAT VAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEPGSGELNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLL ADIGLVTFPVTSGSKGLHLYTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIAP YSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTRY ; 1 ? 2 PDB 3PKY 3PKY 2 GCGGC ? ? 3 PDB 3PKY 3PKY 3 GCCGCAACGCACG ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3PKY A 4 ? 303 ? P71571 1 ? 300 ? 1 300 2 1 3PKY B 4 ? 303 ? P71571 1 ? 300 ? 1 300 3 2 3PKY C 1 ? 5 ? 3PKY 1 ? 5 ? 1 5 4 3 3PKY D 1 ? 13 ? 3PKY 1 ? 13 ? 1 13 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3PKY GLY A 1 ? UNP P71571 ? ? 'expression tag' -2 1 1 3PKY SER A 2 ? UNP P71571 ? ? 'expression tag' -1 2 1 3PKY HIS A 3 ? UNP P71571 ? ? 'expression tag' 0 3 2 3PKY GLY B 1 ? UNP P71571 ? ? 'expression tag' -2 4 2 3PKY SER B 2 ? UNP P71571 ? ? 'expression tag' -1 5 2 3PKY HIS B 3 ? UNP P71571 ? ? 'expression tag' 0 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 29 ? LEU A 44 ? LYS A 26 LEU A 41 1 ? 16 HELX_P HELX_P2 2 GLY A 45 ? ILE A 47 ? GLY A 42 ILE A 44 5 ? 3 HELX_P HELX_P3 3 SER A 98 ? GLN A 108 ? SER A 95 GLN A 105 1 ? 11 HELX_P HELX_P4 4 MET A 148 ? ASP A 165 ? MET A 145 ASP A 162 1 ? 18 HELX_P HELX_P5 5 SER A 191 ? MET A 210 ? SER A 188 MET A 207 1 ? 20 HELX_P HELX_P6 6 TRP A 231 ? SER A 235 ? TRP A 228 SER A 232 5 ? 5 HELX_P HELX_P7 7 THR A 259 ? ASP A 264 ? THR A 256 ASP A 261 1 ? 6 HELX_P HELX_P8 8 TYR A 273 ? GLY A 284 ? TYR A 270 GLY A 281 1 ? 12 HELX_P HELX_P9 9 LYS B 29 ? VAL B 39 ? LYS B 26 VAL B 36 1 ? 11 HELX_P HELX_P10 10 VAL B 39 ? ALA B 48 ? VAL B 36 ALA B 45 1 ? 10 HELX_P HELX_P11 11 SER B 98 ? GLN B 108 ? SER B 95 GLN B 105 1 ? 11 HELX_P HELX_P12 12 MET B 148 ? ASP B 165 ? MET B 145 ASP B 162 1 ? 18 HELX_P HELX_P13 13 SER B 191 ? MET B 210 ? SER B 188 MET B 207 1 ? 20 HELX_P HELX_P14 14 TRP B 231 ? SER B 235 ? TRP B 228 SER B 232 5 ? 5 HELX_P HELX_P15 15 THR B 259 ? ASP B 265 ? THR B 256 ASP B 262 5 ? 7 HELX_P HELX_P16 16 TYR B 273 ? GLY B 284 ? TYR B 270 GLY B 281 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 140 OD1 ? ? ? 1_555 F MN . MN ? ? A ASP 137 A MN 302 1_555 ? ? ? ? ? ? ? 1.963 ? ? metalc2 metalc ? ? A ASP 140 OD2 ? ? ? 1_555 G MN . MN ? ? A ASP 137 A MN 303 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc3 metalc ? ? A ASP 142 OD1 ? ? ? 1_555 F MN . MN ? ? A ASP 139 A MN 302 1_555 ? ? ? ? ? ? ? 1.977 ? ? metalc4 metalc ? ? A ASP 142 OD2 ? ? ? 1_555 G MN . MN ? ? A ASP 139 A MN 303 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc5 metalc ? ? A ASP 230 OD2 ? ? ? 1_555 G MN . MN ? ? A ASP 227 A MN 303 1_555 ? ? ? ? ? ? ? 2.517 ? ? metalc6 metalc ? ? E UTP . O2A ? ? ? 1_555 F MN . MN ? ? A UTP 301 A MN 302 1_555 ? ? ? ? ? ? ? 1.959 ? ? metalc7 metalc ? ? E UTP . O1B ? ? ? 1_555 F MN . MN ? ? A UTP 301 A MN 302 1_555 ? ? ? ? ? ? ? 2.111 ? ? metalc8 metalc ? ? E UTP . O3G ? ? ? 1_555 F MN . MN ? ? A UTP 301 A MN 302 1_555 ? ? ? ? ? ? ? 2.209 ? ? metalc9 metalc ? ? E UTP . O2A ? ? ? 1_555 G MN . MN ? ? A UTP 301 A MN 303 1_555 ? ? ? ? ? ? ? 2.569 ? ? metalc10 metalc ? ? G MN . MN ? ? ? 1_555 K HOH . O ? ? A MN 303 A HOH 307 1_555 ? ? ? ? ? ? ? 2.419 ? ? metalc11 metalc ? ? B ASP 140 OD1 ? ? ? 1_555 I MN . MN ? ? B ASP 137 B MN 302 1_555 ? ? ? ? ? ? ? 2.205 ? ? metalc12 metalc ? ? B ASP 140 OD2 ? ? ? 1_555 J MN . MN ? ? B ASP 137 B MN 303 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc13 metalc ? ? B ASP 142 OD1 ? ? ? 1_555 I MN . MN ? ? B ASP 139 B MN 302 1_555 ? ? ? ? ? ? ? 1.873 ? ? metalc14 metalc ? ? B ASP 142 OD2 ? ? ? 1_555 J MN . MN ? ? B ASP 139 B MN 303 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc15 metalc ? ? B ASP 230 OD2 ? ? ? 1_555 J MN . MN ? ? B ASP 227 B MN 303 1_555 ? ? ? ? ? ? ? 2.479 ? ? metalc16 metalc ? ? H UTP . O2A ? ? ? 1_555 I MN . MN ? ? B UTP 301 B MN 302 1_555 ? ? ? ? ? ? ? 1.783 ? ? metalc17 metalc ? ? H UTP . O1B ? ? ? 1_555 I MN . MN ? ? B UTP 301 B MN 302 1_555 ? ? ? ? ? ? ? 2.200 ? ? metalc18 metalc ? ? H UTP . O3G ? ? ? 1_555 I MN . MN ? ? B UTP 301 B MN 302 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc19 metalc ? ? H UTP . O2A ? ? ? 1_555 J MN . MN ? ? B UTP 301 B MN 303 1_555 ? ? ? ? ? ? ? 2.603 ? ? metalc20 metalc ? ? J MN . MN ? ? ? 1_555 L HOH . O ? ? B MN 303 B HOH 305 1_555 ? ? ? ? ? ? ? 2.134 ? ? hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 1 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 1 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 1 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 140 ? A ASP 137 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 OD1 ? A ASP 142 ? A ASP 139 ? 1_555 87.8 ? 2 OD1 ? A ASP 140 ? A ASP 137 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 O2A ? E UTP . ? A UTP 301 ? 1_555 107.3 ? 3 OD1 ? A ASP 142 ? A ASP 139 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 O2A ? E UTP . ? A UTP 301 ? 1_555 78.6 ? 4 OD1 ? A ASP 140 ? A ASP 137 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 O1B ? E UTP . ? A UTP 301 ? 1_555 105.3 ? 5 OD1 ? A ASP 142 ? A ASP 139 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 O1B ? E UTP . ? A UTP 301 ? 1_555 165.8 ? 6 O2A ? E UTP . ? A UTP 301 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 O1B ? E UTP . ? A UTP 301 ? 1_555 92.0 ? 7 OD1 ? A ASP 140 ? A ASP 137 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 O3G ? E UTP . ? A UTP 301 ? 1_555 170.4 ? 8 OD1 ? A ASP 142 ? A ASP 139 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 O3G ? E UTP . ? A UTP 301 ? 1_555 83.7 ? 9 O2A ? E UTP . ? A UTP 301 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 O3G ? E UTP . ? A UTP 301 ? 1_555 75.3 ? 10 O1B ? E UTP . ? A UTP 301 ? 1_555 MN ? F MN . ? A MN 302 ? 1_555 O3G ? E UTP . ? A UTP 301 ? 1_555 83.6 ? 11 OD2 ? A ASP 140 ? A ASP 137 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 OD2 ? A ASP 142 ? A ASP 139 ? 1_555 87.3 ? 12 OD2 ? A ASP 140 ? A ASP 137 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 OD2 ? A ASP 230 ? A ASP 227 ? 1_555 83.9 ? 13 OD2 ? A ASP 142 ? A ASP 139 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 OD2 ? A ASP 230 ? A ASP 227 ? 1_555 86.1 ? 14 OD2 ? A ASP 140 ? A ASP 137 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 O2A ? E UTP . ? A UTP 301 ? 1_555 84.7 ? 15 OD2 ? A ASP 142 ? A ASP 139 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 O2A ? E UTP . ? A UTP 301 ? 1_555 81.3 ? 16 OD2 ? A ASP 230 ? A ASP 227 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 O2A ? E UTP . ? A UTP 301 ? 1_555 163.4 ? 17 OD2 ? A ASP 140 ? A ASP 137 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 O ? K HOH . ? A HOH 307 ? 1_555 162.1 ? 18 OD2 ? A ASP 142 ? A ASP 139 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 O ? K HOH . ? A HOH 307 ? 1_555 76.7 ? 19 OD2 ? A ASP 230 ? A ASP 227 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 O ? K HOH . ? A HOH 307 ? 1_555 102.8 ? 20 O2A ? E UTP . ? A UTP 301 ? 1_555 MN ? G MN . ? A MN 303 ? 1_555 O ? K HOH . ? A HOH 307 ? 1_555 84.9 ? 21 OD1 ? B ASP 140 ? B ASP 137 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 OD1 ? B ASP 142 ? B ASP 139 ? 1_555 85.8 ? 22 OD1 ? B ASP 140 ? B ASP 137 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 O2A ? H UTP . ? B UTP 301 ? 1_555 103.8 ? 23 OD1 ? B ASP 142 ? B ASP 139 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 O2A ? H UTP . ? B UTP 301 ? 1_555 100.8 ? 24 OD1 ? B ASP 140 ? B ASP 137 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 O1B ? H UTP . ? B UTP 301 ? 1_555 101.5 ? 25 OD1 ? B ASP 142 ? B ASP 139 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 O1B ? H UTP . ? B UTP 301 ? 1_555 169.8 ? 26 O2A ? H UTP . ? B UTP 301 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 O1B ? H UTP . ? B UTP 301 ? 1_555 84.4 ? 27 OD1 ? B ASP 140 ? B ASP 137 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 O3G ? H UTP . ? B UTP 301 ? 1_555 173.8 ? 28 OD1 ? B ASP 142 ? B ASP 139 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 O3G ? H UTP . ? B UTP 301 ? 1_555 90.7 ? 29 O2A ? H UTP . ? B UTP 301 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 O3G ? H UTP . ? B UTP 301 ? 1_555 81.9 ? 30 O1B ? H UTP . ? B UTP 301 ? 1_555 MN ? I MN . ? B MN 302 ? 1_555 O3G ? H UTP . ? B UTP 301 ? 1_555 81.3 ? 31 OD2 ? B ASP 140 ? B ASP 137 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 OD2 ? B ASP 142 ? B ASP 139 ? 1_555 89.2 ? 32 OD2 ? B ASP 140 ? B ASP 137 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 OD2 ? B ASP 230 ? B ASP 227 ? 1_555 86.4 ? 33 OD2 ? B ASP 142 ? B ASP 139 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 OD2 ? B ASP 230 ? B ASP 227 ? 1_555 101.1 ? 34 OD2 ? B ASP 140 ? B ASP 137 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 O2A ? H UTP . ? B UTP 301 ? 1_555 75.2 ? 35 OD2 ? B ASP 142 ? B ASP 139 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 O2A ? H UTP . ? B UTP 301 ? 1_555 88.4 ? 36 OD2 ? B ASP 230 ? B ASP 227 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 O2A ? H UTP . ? B UTP 301 ? 1_555 159.3 ? 37 OD2 ? B ASP 140 ? B ASP 137 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 O ? L HOH . ? B HOH 305 ? 1_555 72.4 ? 38 OD2 ? B ASP 142 ? B ASP 139 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 O ? L HOH . ? B HOH 305 ? 1_555 161.5 ? 39 OD2 ? B ASP 230 ? B ASP 227 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 O ? L HOH . ? B HOH 305 ? 1_555 76.3 ? 40 O2A ? H UTP . ? B UTP 301 ? 1_555 MN ? J MN . ? B MN 303 ? 1_555 O ? L HOH . ? B HOH 305 ? 1_555 88.8 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? C ? 2 ? D ? 4 ? E ? 5 ? F ? 2 ? G ? 2 ? H ? 4 ? I ? 2 ? J ? 4 ? K ? 5 ? L ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel F 1 2 ? anti-parallel G 1 2 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel K 3 4 ? anti-parallel K 4 5 ? anti-parallel L 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 20 ? TYR A 22 ? VAL A 17 TYR A 19 A 2 THR A 27 ? THR A 28 ? THR A 24 THR A 25 B 1 PHE A 66 ? GLU A 68 ? PHE A 63 GLU A 65 B 2 THR A 53 ? ARG A 56 ? THR A 50 ARG A 53 B 3 GLU A 112 ? VAL A 115 ? GLU A 109 VAL A 112 B 4 THR A 240 ? ILE A 241 ? THR A 237 ILE A 238 C 1 SER A 80 ? ALA A 85 ? SER A 77 ALA A 82 C 2 THR A 90 ? ILE A 95 ? THR A 87 ILE A 92 D 1 TRP A 118 ? ALA A 122 ? TRP A 115 ALA A 119 D 2 LEU A 129 ? PRO A 143 ? LEU A 126 PRO A 140 D 3 VAL A 227 ? ASP A 230 ? VAL A 224 ASP A 227 D 4 VAL A 214 ? THR A 215 ? VAL A 211 THR A 212 E 1 TRP A 118 ? ALA A 122 ? TRP A 115 ALA A 119 E 2 LEU A 129 ? PRO A 143 ? LEU A 126 PRO A 140 E 3 LEU A 180 ? VAL A 190 ? LEU A 177 VAL A 187 E 4 PHE A 171 ? THR A 174 ? PHE A 168 THR A 171 E 5 ALA A 256 ? PRO A 257 ? ALA A 253 PRO A 254 F 1 THR A 253 ? VAL A 254 ? THR A 250 VAL A 251 F 2 LEU A 271 ? SER A 272 ? LEU A 268 SER A 269 G 1 VAL B 20 ? TYR B 22 ? VAL B 17 TYR B 19 G 2 THR B 27 ? THR B 28 ? THR B 24 THR B 25 H 1 PHE B 66 ? GLU B 68 ? PHE B 63 GLU B 65 H 2 THR B 53 ? ARG B 56 ? THR B 50 ARG B 53 H 3 GLU B 112 ? VAL B 115 ? GLU B 109 VAL B 112 H 4 THR B 240 ? ILE B 241 ? THR B 237 ILE B 238 I 1 SER B 80 ? ALA B 85 ? SER B 77 ALA B 82 I 2 THR B 90 ? ILE B 95 ? THR B 87 ILE B 92 J 1 TRP B 118 ? ALA B 122 ? TRP B 115 ALA B 119 J 2 LEU B 129 ? PRO B 143 ? LEU B 126 PRO B 140 J 3 VAL B 227 ? ASP B 230 ? VAL B 224 ASP B 227 J 4 VAL B 214 ? THR B 215 ? VAL B 211 THR B 212 K 1 TRP B 118 ? ALA B 122 ? TRP B 115 ALA B 119 K 2 LEU B 129 ? PRO B 143 ? LEU B 126 PRO B 140 K 3 LEU B 180 ? VAL B 190 ? LEU B 177 VAL B 187 K 4 PHE B 171 ? THR B 174 ? PHE B 168 THR B 171 K 5 ALA B 256 ? PRO B 257 ? ALA B 253 PRO B 254 L 1 THR B 253 ? VAL B 254 ? THR B 250 VAL B 251 L 2 LEU B 271 ? SER B 272 ? LEU B 268 SER B 269 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 21 ? N LEU A 18 O THR A 27 ? O THR A 24 B 1 2 O GLU A 68 ? O GLU A 65 N ARG A 54 ? N ARG A 51 B 2 3 N THR A 53 ? N THR A 50 O HIS A 114 ? O HIS A 111 B 3 4 N VAL A 115 ? N VAL A 112 O THR A 240 ? O THR A 237 C 1 2 N ALA A 82 ? N ALA A 79 O TYR A 93 ? O TYR A 90 D 1 2 N VAL A 121 ? N VAL A 118 O ASN A 130 ? O ASN A 127 D 2 3 N ASP A 142 ? N ASP A 139 O PHE A 228 ? O PHE A 225 D 3 4 O VAL A 229 ? O VAL A 226 N THR A 215 ? N THR A 212 E 1 2 N VAL A 121 ? N VAL A 118 O ASN A 130 ? O ASN A 127 E 2 3 N PHE A 139 ? N PHE A 136 O LEU A 182 ? O LEU A 179 E 3 4 O HIS A 181 ? O HIS A 178 N VAL A 173 ? N VAL A 170 E 4 5 N THR A 174 ? N THR A 171 O ALA A 256 ? O ALA A 253 F 1 2 N VAL A 254 ? N VAL A 251 O LEU A 271 ? O LEU A 268 G 1 2 N LEU B 21 ? N LEU B 18 O THR B 27 ? O THR B 24 H 1 2 O GLU B 68 ? O GLU B 65 N ARG B 54 ? N ARG B 51 H 2 3 N THR B 53 ? N THR B 50 O HIS B 114 ? O HIS B 111 H 3 4 N VAL B 115 ? N VAL B 112 O THR B 240 ? O THR B 237 I 1 2 N VAL B 84 ? N VAL B 81 O THR B 91 ? O THR B 88 J 1 2 N VAL B 121 ? N VAL B 118 O ASN B 130 ? O ASN B 127 J 2 3 N ASP B 142 ? N ASP B 139 O PHE B 228 ? O PHE B 225 J 3 4 O VAL B 227 ? O VAL B 224 N THR B 215 ? N THR B 212 K 1 2 N VAL B 121 ? N VAL B 118 O ASN B 130 ? O ASN B 127 K 2 3 N PHE B 139 ? N PHE B 136 O LEU B 182 ? O LEU B 179 K 3 4 O HIS B 181 ? O HIS B 178 N VAL B 173 ? N VAL B 170 K 4 5 N THR B 174 ? N THR B 171 O ALA B 256 ? O ALA B 253 L 1 2 N VAL B 254 ? N VAL B 251 O LEU B 271 ? O LEU B 268 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A UTP 301 ? 18 'BINDING SITE FOR RESIDUE UTP A 301' AC2 Software A MN 302 ? 4 'BINDING SITE FOR RESIDUE MN A 302' AC3 Software A MN 303 ? 5 'BINDING SITE FOR RESIDUE MN A 303' AC4 Software B UTP 301 ? 19 'BINDING SITE FOR RESIDUE UTP B 301' AC5 Software B MN 302 ? 5 'BINDING SITE FOR RESIDUE MN B 302' AC6 Software B MN 303 ? 6 'BINDING SITE FOR RESIDUE MN B 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 PHE A 67 ? PHE A 64 . ? 1_555 ? 2 AC1 18 HIS A 114 ? HIS A 111 . ? 1_555 ? 3 AC1 18 ASP A 140 ? ASP A 137 . ? 1_555 ? 4 AC1 18 ASP A 142 ? ASP A 139 . ? 1_555 ? 5 AC1 18 SER A 175 ? SER A 172 . ? 1_555 ? 6 AC1 18 SER A 177 ? SER A 174 . ? 1_555 ? 7 AC1 18 LYS A 178 ? LYS A 175 . ? 1_555 ? 8 AC1 18 GLY A 179 ? GLY A 176 . ? 1_555 ? 9 AC1 18 HIS A 181 ? HIS A 178 . ? 1_555 ? 10 AC1 18 GLN A 233 ? GLN A 230 . ? 1_555 ? 11 AC1 18 THR A 239 ? THR A 236 . ? 1_555 ? 12 AC1 18 THR A 240 ? THR A 237 . ? 1_555 ? 13 AC1 18 ILE A 241 ? ILE A 238 . ? 1_555 ? 14 AC1 18 ARG A 247 ? ARG A 244 . ? 1_555 ? 15 AC1 18 MN F . ? MN A 302 . ? 1_555 ? 16 AC1 18 MN G . ? MN A 303 . ? 1_555 ? 17 AC1 18 HOH K . ? HOH A 305 . ? 1_555 ? 18 AC1 18 DA D 6 ? DA D 6 . ? 1_555 ? 19 AC2 4 ASP A 140 ? ASP A 137 . ? 1_555 ? 20 AC2 4 ASP A 142 ? ASP A 139 . ? 1_555 ? 21 AC2 4 HIS A 181 ? HIS A 178 . ? 1_555 ? 22 AC2 4 UTP E . ? UTP A 301 . ? 1_555 ? 23 AC3 5 ASP A 140 ? ASP A 137 . ? 1_555 ? 24 AC3 5 ASP A 142 ? ASP A 139 . ? 1_555 ? 25 AC3 5 ASP A 230 ? ASP A 227 . ? 1_555 ? 26 AC3 5 UTP E . ? UTP A 301 . ? 1_555 ? 27 AC3 5 HOH K . ? HOH A 307 . ? 1_555 ? 28 AC4 19 PHE B 67 ? PHE B 64 . ? 1_555 ? 29 AC4 19 HIS B 114 ? HIS B 111 . ? 1_555 ? 30 AC4 19 ASP B 140 ? ASP B 137 . ? 1_555 ? 31 AC4 19 ASP B 142 ? ASP B 139 . ? 1_555 ? 32 AC4 19 SER B 175 ? SER B 172 . ? 1_555 ? 33 AC4 19 SER B 177 ? SER B 174 . ? 1_555 ? 34 AC4 19 LYS B 178 ? LYS B 175 . ? 1_555 ? 35 AC4 19 GLY B 179 ? GLY B 176 . ? 1_555 ? 36 AC4 19 HIS B 181 ? HIS B 178 . ? 1_555 ? 37 AC4 19 GLN B 233 ? GLN B 230 . ? 1_555 ? 38 AC4 19 THR B 239 ? THR B 236 . ? 1_555 ? 39 AC4 19 THR B 240 ? THR B 237 . ? 1_555 ? 40 AC4 19 ILE B 241 ? ILE B 238 . ? 1_555 ? 41 AC4 19 ARG B 247 ? ARG B 244 . ? 1_555 ? 42 AC4 19 MN I . ? MN B 302 . ? 1_555 ? 43 AC4 19 MN J . ? MN B 303 . ? 1_555 ? 44 AC4 19 HOH L . ? HOH B 305 . ? 1_555 ? 45 AC4 19 HOH L . ? HOH B 314 . ? 1_555 ? 46 AC4 19 DG C 4 ? DG C 4 . ? 1_555 ? 47 AC5 5 ASP B 140 ? ASP B 137 . ? 1_555 ? 48 AC5 5 ASP B 142 ? ASP B 139 . ? 1_555 ? 49 AC5 5 HIS B 181 ? HIS B 178 . ? 1_555 ? 50 AC5 5 UTP H . ? UTP B 301 . ? 1_555 ? 51 AC5 5 MN J . ? MN B 303 . ? 1_555 ? 52 AC6 6 ASP B 140 ? ASP B 137 . ? 1_555 ? 53 AC6 6 ASP B 142 ? ASP B 139 . ? 1_555 ? 54 AC6 6 ASP B 230 ? ASP B 227 . ? 1_555 ? 55 AC6 6 UTP H . ? UTP B 301 . ? 1_555 ? 56 AC6 6 MN I . ? MN B 302 . ? 1_555 ? 57 AC6 6 HOH L . ? HOH B 305 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P C DG 1 ? ? OP3 C DG 1 ? ? 1.473 1.607 -0.134 0.012 N 2 1 "O3'" D DC 2 ? ? "C3'" D DC 2 ? ? 1.359 1.419 -0.060 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OP1 C DG 1 ? ? P C DG 1 ? ? OP2 C DG 1 ? ? 104.92 119.60 -14.68 1.50 N 2 1 "O4'" C DG 1 ? ? "C1'" C DG 1 ? ? N9 C DG 1 ? ? 103.01 108.00 -4.99 0.70 N 3 1 "O4'" D DC 5 ? ? "C1'" D DC 5 ? ? N1 D DC 5 ? ? 111.11 108.30 2.81 0.30 N 4 1 "O4'" D DA 7 ? ? "C1'" D DA 7 ? ? N9 D DA 7 ? ? 110.86 108.30 2.56 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 84 ? ? 8.80 -98.93 2 1 ASP A 94 ? ? -148.60 17.80 3 1 GLU A 142 ? ? -38.52 123.43 4 1 ASP A 162 ? ? -67.34 18.36 5 1 ILE A 163 ? ? -146.05 27.09 6 1 SER A 174 ? ? -138.08 -103.51 7 1 TYR A 241 ? ? 88.40 -0.06 8 1 ALA A 252 ? ? -68.97 82.75 9 1 ALA A 291 ? ? 68.53 157.24 10 1 ARG B 84 ? ? -12.03 -73.63 11 1 ASP B 94 ? ? -150.45 16.92 12 1 ILE B 163 ? ? -145.24 24.93 13 1 SER B 174 ? ? -120.05 -106.07 14 1 TYR B 241 ? ? 82.34 9.00 15 1 ALA B 252 ? ? -66.35 92.09 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 47.1210 60.1950 1.5790 0.0170 0.0486 0.0740 -0.0191 -0.0194 0.0515 2.7500 3.6640 3.7442 0.5508 1.0458 1.1189 -0.1212 0.1280 -0.0068 -0.0457 -0.0235 0.1876 -0.1598 -0.1784 0.1814 'X-RAY DIFFRACTION' 2 ? refined 12.5880 25.6940 -9.6230 0.0450 0.0147 0.0793 -0.0173 0.0495 -0.0204 3.5552 2.7229 4.1059 0.4844 1.0674 0.9496 0.1243 -0.1206 -0.0036 -0.1173 0.2102 -0.0003 -0.0506 0.1948 -0.1641 'X-RAY DIFFRACTION' 3 ? refined 27.2500 41.6990 -11.6520 0.3573 0.5356 0.7008 0.1498 0.0841 0.0814 12.8898 5.9352 5.3361 8.3703 -2.7591 -3.3165 -0.6818 -0.4810 1.1628 -0.1206 0.0831 -0.2794 -0.7355 1.0733 1.1058 'X-RAY DIFFRACTION' 4 ? refined 31.1500 46.2630 4.1930 0.4947 0.3949 0.6435 0.2855 0.0950 -0.0525 2.3723 10.9019 3.4469 3.5322 -1.8773 0.5200 -0.5536 0.0356 0.5180 -0.5565 -0.0975 0.4637 0.4912 1.1902 0.9328 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 6 A 290 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 6 B 290 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 1 A 303 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 B 1 B 303 ? . . . . ? # _pdbx_phasing_MR.entry_id 3PKY _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 41.130 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 4.000 _pdbx_phasing_MR.d_res_low_rotation 38.260 _pdbx_phasing_MR.d_res_high_translation 4.000 _pdbx_phasing_MR.d_res_low_translation 38.260 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A GLY 2 ? A GLY 5 6 1 Y 1 A SER 3 ? A SER 6 7 1 Y 1 A ALA 4 ? A ALA 7 8 1 Y 1 A SER 5 ? A SER 8 9 1 Y 1 A VAL 293 ? A VAL 296 10 1 Y 1 A ALA 294 ? A ALA 297 11 1 Y 1 A ASP 295 ? A ASP 298 12 1 Y 1 A ARG 296 ? A ARG 299 13 1 Y 1 A LEU 297 ? A LEU 300 14 1 Y 1 A THR 298 ? A THR 301 15 1 Y 1 A ARG 299 ? A ARG 302 16 1 Y 1 A TYR 300 ? A TYR 303 17 1 Y 1 B GLY -2 ? B GLY 1 18 1 Y 1 B SER -1 ? B SER 2 19 1 Y 1 B HIS 0 ? B HIS 3 20 1 Y 1 B MET 1 ? B MET 4 21 1 Y 1 B GLY 2 ? B GLY 5 22 1 Y 1 B SER 3 ? B SER 6 23 1 Y 1 B ALA 4 ? B ALA 7 24 1 Y 1 B SER 5 ? B SER 8 25 1 Y 1 B GLU 6 ? B GLU 9 26 1 Y 1 B VAL 293 ? B VAL 296 27 1 Y 1 B ALA 294 ? B ALA 297 28 1 Y 1 B ASP 295 ? B ASP 298 29 1 Y 1 B ARG 296 ? B ARG 299 30 1 Y 1 B LEU 297 ? B LEU 300 31 1 Y 1 B THR 298 ? B THR 301 32 1 Y 1 B ARG 299 ? B ARG 302 33 1 Y 1 B TYR 300 ? B TYR 303 34 1 Y 1 D DG 1 ? D DG 1 35 1 Y 1 D DC 8 ? D DC 8 36 1 Y 1 D DG 9 ? D DG 9 37 1 Y 1 D DC 10 ? D DC 10 38 1 Y 1 D DA 11 ? D DA 11 39 1 Y 1 D DC 12 ? D DC 12 40 1 Y 1 D DG 13 ? D DG 13 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 GLN N N N N 181 GLN CA C N S 182 GLN C C N N 183 GLN O O N N 184 GLN CB C N N 185 GLN CG C N N 186 GLN CD C N N 187 GLN OE1 O N N 188 GLN NE2 N N N 189 GLN OXT O N N 190 GLN H H N N 191 GLN H2 H N N 192 GLN HA H N N 193 GLN HB2 H N N 194 GLN HB3 H N N 195 GLN HG2 H N N 196 GLN HG3 H N N 197 GLN HE21 H N N 198 GLN HE22 H N N 199 GLN HXT H N N 200 GLU N N N N 201 GLU CA C N S 202 GLU C C N N 203 GLU O O N N 204 GLU CB C N N 205 GLU CG C N N 206 GLU CD C N N 207 GLU OE1 O N N 208 GLU OE2 O N N 209 GLU OXT O N N 210 GLU H H N N 211 GLU H2 H N N 212 GLU HA H N N 213 GLU HB2 H N N 214 GLU HB3 H N N 215 GLU HG2 H N N 216 GLU HG3 H N N 217 GLU HE2 H N N 218 GLU HXT H N N 219 GLY N N N N 220 GLY CA C N N 221 GLY C C N N 222 GLY O O N N 223 GLY OXT O N N 224 GLY H H N N 225 GLY H2 H N N 226 GLY HA2 H N N 227 GLY HA3 H N N 228 GLY HXT H N N 229 HIS N N N N 230 HIS CA C N S 231 HIS C C N N 232 HIS O O N N 233 HIS CB C N N 234 HIS CG C Y N 235 HIS ND1 N Y N 236 HIS CD2 C Y N 237 HIS CE1 C Y N 238 HIS NE2 N Y N 239 HIS OXT O N N 240 HIS H H N N 241 HIS H2 H N N 242 HIS HA H N N 243 HIS HB2 H N N 244 HIS HB3 H N N 245 HIS HD1 H N N 246 HIS HD2 H N N 247 HIS HE1 H N N 248 HIS HE2 H N N 249 HIS HXT H N N 250 HOH O O N N 251 HOH H1 H N N 252 HOH H2 H N N 253 ILE N N N N 254 ILE CA C N S 255 ILE C C N N 256 ILE O O N N 257 ILE CB C N S 258 ILE CG1 C N N 259 ILE CG2 C N N 260 ILE CD1 C N N 261 ILE OXT O N N 262 ILE H H N N 263 ILE H2 H N N 264 ILE HA H N N 265 ILE HB H N N 266 ILE HG12 H N N 267 ILE HG13 H N N 268 ILE HG21 H N N 269 ILE HG22 H N N 270 ILE HG23 H N N 271 ILE HD11 H N N 272 ILE HD12 H N N 273 ILE HD13 H N N 274 ILE HXT H N N 275 LEU N N N N 276 LEU CA C N S 277 LEU C C N N 278 LEU O O N N 279 LEU CB C N N 280 LEU CG C N N 281 LEU CD1 C N N 282 LEU CD2 C N N 283 LEU OXT O N N 284 LEU H H N N 285 LEU H2 H N N 286 LEU HA H N N 287 LEU HB2 H N N 288 LEU HB3 H N N 289 LEU HG H N N 290 LEU HD11 H N N 291 LEU HD12 H N N 292 LEU HD13 H N N 293 LEU HD21 H N N 294 LEU HD22 H N N 295 LEU HD23 H N N 296 LEU HXT H N N 297 LYS N N N N 298 LYS CA C N S 299 LYS C C N N 300 LYS O O N N 301 LYS CB C N N 302 LYS CG C N N 303 LYS CD C N N 304 LYS CE C N N 305 LYS NZ N N N 306 LYS OXT O N N 307 LYS H H N N 308 LYS H2 H N N 309 LYS HA H N N 310 LYS HB2 H N N 311 LYS HB3 H N N 312 LYS HG2 H N N 313 LYS HG3 H N N 314 LYS HD2 H N N 315 LYS HD3 H N N 316 LYS HE2 H N N 317 LYS HE3 H N N 318 LYS HZ1 H N N 319 LYS HZ2 H N N 320 LYS HZ3 H N N 321 LYS HXT H N N 322 MET N N N N 323 MET CA C N S 324 MET C C N N 325 MET O O N N 326 MET CB C N N 327 MET CG C N N 328 MET SD S N N 329 MET CE C N N 330 MET OXT O N N 331 MET H H N N 332 MET H2 H N N 333 MET HA H N N 334 MET HB2 H N N 335 MET HB3 H N N 336 MET HG2 H N N 337 MET HG3 H N N 338 MET HE1 H N N 339 MET HE2 H N N 340 MET HE3 H N N 341 MET HXT H N N 342 MN MN MN N N 343 PHE N N N N 344 PHE CA C N S 345 PHE C C N N 346 PHE O O N N 347 PHE CB C N N 348 PHE CG C Y N 349 PHE CD1 C Y N 350 PHE CD2 C Y N 351 PHE CE1 C Y N 352 PHE CE2 C Y N 353 PHE CZ C Y N 354 PHE OXT O N N 355 PHE H H N N 356 PHE H2 H N N 357 PHE HA H N N 358 PHE HB2 H N N 359 PHE HB3 H N N 360 PHE HD1 H N N 361 PHE HD2 H N N 362 PHE HE1 H N N 363 PHE HE2 H N N 364 PHE HZ H N N 365 PHE HXT H N N 366 PRO N N N N 367 PRO CA C N S 368 PRO C C N N 369 PRO O O N N 370 PRO CB C N N 371 PRO CG C N N 372 PRO CD C N N 373 PRO OXT O N N 374 PRO H H N N 375 PRO HA H N N 376 PRO HB2 H N N 377 PRO HB3 H N N 378 PRO HG2 H N N 379 PRO HG3 H N N 380 PRO HD2 H N N 381 PRO HD3 H N N 382 PRO HXT H N N 383 SER N N N N 384 SER CA C N S 385 SER C C N N 386 SER O O N N 387 SER CB C N N 388 SER OG O N N 389 SER OXT O N N 390 SER H H N N 391 SER H2 H N N 392 SER HA H N N 393 SER HB2 H N N 394 SER HB3 H N N 395 SER HG H N N 396 SER HXT H N N 397 THR N N N N 398 THR CA C N S 399 THR C C N N 400 THR O O N N 401 THR CB C N R 402 THR OG1 O N N 403 THR CG2 C N N 404 THR OXT O N N 405 THR H H N N 406 THR H2 H N N 407 THR HA H N N 408 THR HB H N N 409 THR HG1 H N N 410 THR HG21 H N N 411 THR HG22 H N N 412 THR HG23 H N N 413 THR HXT H N N 414 TRP N N N N 415 TRP CA C N S 416 TRP C C N N 417 TRP O O N N 418 TRP CB C N N 419 TRP CG C Y N 420 TRP CD1 C Y N 421 TRP CD2 C Y N 422 TRP NE1 N Y N 423 TRP CE2 C Y N 424 TRP CE3 C Y N 425 TRP CZ2 C Y N 426 TRP CZ3 C Y N 427 TRP CH2 C Y N 428 TRP OXT O N N 429 TRP H H N N 430 TRP H2 H N N 431 TRP HA H N N 432 TRP HB2 H N N 433 TRP HB3 H N N 434 TRP HD1 H N N 435 TRP HE1 H N N 436 TRP HE3 H N N 437 TRP HZ2 H N N 438 TRP HZ3 H N N 439 TRP HH2 H N N 440 TRP HXT H N N 441 TYR N N N N 442 TYR CA C N S 443 TYR C C N N 444 TYR O O N N 445 TYR CB C N N 446 TYR CG C Y N 447 TYR CD1 C Y N 448 TYR CD2 C Y N 449 TYR CE1 C Y N 450 TYR CE2 C Y N 451 TYR CZ C Y N 452 TYR OH O N N 453 TYR OXT O N N 454 TYR H H N N 455 TYR H2 H N N 456 TYR HA H N N 457 TYR HB2 H N N 458 TYR HB3 H N N 459 TYR HD1 H N N 460 TYR HD2 H N N 461 TYR HE1 H N N 462 TYR HE2 H N N 463 TYR HH H N N 464 TYR HXT H N N 465 UTP PA P N R 466 UTP O1A O N N 467 UTP O2A O N N 468 UTP O3A O N N 469 UTP "O5'" O N N 470 UTP PB P N S 471 UTP O1B O N N 472 UTP O2B O N N 473 UTP O3B O N N 474 UTP PG P N N 475 UTP O1G O N N 476 UTP O2G O N N 477 UTP O3G O N N 478 UTP "C5'" C N N 479 UTP "C4'" C N R 480 UTP "O4'" O N N 481 UTP "C1'" C N R 482 UTP "C2'" C N R 483 UTP "O2'" O N N 484 UTP "C3'" C N S 485 UTP "O3'" O N N 486 UTP N1 N Y N 487 UTP C6 C Y N 488 UTP C2 C Y N 489 UTP O2 O N N 490 UTP N3 N Y N 491 UTP C4 C Y N 492 UTP O4 O N N 493 UTP C5 C Y N 494 UTP H2A H N N 495 UTP H1B H N N 496 UTP H1G H N N 497 UTP H3G H N N 498 UTP "H5'1" H N N 499 UTP "H5'2" H N N 500 UTP "H4'" H N N 501 UTP "H1'" H N N 502 UTP "H2'" H N N 503 UTP HA H N N 504 UTP "H3'" H N N 505 UTP HB H N N 506 UTP H6 H N N 507 UTP H3 H N N 508 UTP H5 H N N 509 VAL N N N N 510 VAL CA C N S 511 VAL C C N N 512 VAL O O N N 513 VAL CB C N N 514 VAL CG1 C N N 515 VAL CG2 C N N 516 VAL OXT O N N 517 VAL H H N N 518 VAL H2 H N N 519 VAL HA H N N 520 VAL HB H N N 521 VAL HG11 H N N 522 VAL HG12 H N N 523 VAL HG13 H N N 524 VAL HG21 H N N 525 VAL HG22 H N N 526 VAL HG23 H N N 527 VAL HXT H N N 528 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 GLN N CA sing N N 182 GLN N H sing N N 183 GLN N H2 sing N N 184 GLN CA C sing N N 185 GLN CA CB sing N N 186 GLN CA HA sing N N 187 GLN C O doub N N 188 GLN C OXT sing N N 189 GLN CB CG sing N N 190 GLN CB HB2 sing N N 191 GLN CB HB3 sing N N 192 GLN CG CD sing N N 193 GLN CG HG2 sing N N 194 GLN CG HG3 sing N N 195 GLN CD OE1 doub N N 196 GLN CD NE2 sing N N 197 GLN NE2 HE21 sing N N 198 GLN NE2 HE22 sing N N 199 GLN OXT HXT sing N N 200 GLU N CA sing N N 201 GLU N H sing N N 202 GLU N H2 sing N N 203 GLU CA C sing N N 204 GLU CA CB sing N N 205 GLU CA HA sing N N 206 GLU C O doub N N 207 GLU C OXT sing N N 208 GLU CB CG sing N N 209 GLU CB HB2 sing N N 210 GLU CB HB3 sing N N 211 GLU CG CD sing N N 212 GLU CG HG2 sing N N 213 GLU CG HG3 sing N N 214 GLU CD OE1 doub N N 215 GLU CD OE2 sing N N 216 GLU OE2 HE2 sing N N 217 GLU OXT HXT sing N N 218 GLY N CA sing N N 219 GLY N H sing N N 220 GLY N H2 sing N N 221 GLY CA C sing N N 222 GLY CA HA2 sing N N 223 GLY CA HA3 sing N N 224 GLY C O doub N N 225 GLY C OXT sing N N 226 GLY OXT HXT sing N N 227 HIS N CA sing N N 228 HIS N H sing N N 229 HIS N H2 sing N N 230 HIS CA C sing N N 231 HIS CA CB sing N N 232 HIS CA HA sing N N 233 HIS C O doub N N 234 HIS C OXT sing N N 235 HIS CB CG sing N N 236 HIS CB HB2 sing N N 237 HIS CB HB3 sing N N 238 HIS CG ND1 sing Y N 239 HIS CG CD2 doub Y N 240 HIS ND1 CE1 doub Y N 241 HIS ND1 HD1 sing N N 242 HIS CD2 NE2 sing Y N 243 HIS CD2 HD2 sing N N 244 HIS CE1 NE2 sing Y N 245 HIS CE1 HE1 sing N N 246 HIS NE2 HE2 sing N N 247 HIS OXT HXT sing N N 248 HOH O H1 sing N N 249 HOH O H2 sing N N 250 ILE N CA sing N N 251 ILE N H sing N N 252 ILE N H2 sing N N 253 ILE CA C sing N N 254 ILE CA CB sing N N 255 ILE CA HA sing N N 256 ILE C O doub N N 257 ILE C OXT sing N N 258 ILE CB CG1 sing N N 259 ILE CB CG2 sing N N 260 ILE CB HB sing N N 261 ILE CG1 CD1 sing N N 262 ILE CG1 HG12 sing N N 263 ILE CG1 HG13 sing N N 264 ILE CG2 HG21 sing N N 265 ILE CG2 HG22 sing N N 266 ILE CG2 HG23 sing N N 267 ILE CD1 HD11 sing N N 268 ILE CD1 HD12 sing N N 269 ILE CD1 HD13 sing N N 270 ILE OXT HXT sing N N 271 LEU N CA sing N N 272 LEU N H sing N N 273 LEU N H2 sing N N 274 LEU CA C sing N N 275 LEU CA CB sing N N 276 LEU CA HA sing N N 277 LEU C O doub N N 278 LEU C OXT sing N N 279 LEU CB CG sing N N 280 LEU CB HB2 sing N N 281 LEU CB HB3 sing N N 282 LEU CG CD1 sing N N 283 LEU CG CD2 sing N N 284 LEU CG HG sing N N 285 LEU CD1 HD11 sing N N 286 LEU CD1 HD12 sing N N 287 LEU CD1 HD13 sing N N 288 LEU CD2 HD21 sing N N 289 LEU CD2 HD22 sing N N 290 LEU CD2 HD23 sing N N 291 LEU OXT HXT sing N N 292 LYS N CA sing N N 293 LYS N H sing N N 294 LYS N H2 sing N N 295 LYS CA C sing N N 296 LYS CA CB sing N N 297 LYS CA HA sing N N 298 LYS C O doub N N 299 LYS C OXT sing N N 300 LYS CB CG sing N N 301 LYS CB HB2 sing N N 302 LYS CB HB3 sing N N 303 LYS CG CD sing N N 304 LYS CG HG2 sing N N 305 LYS CG HG3 sing N N 306 LYS CD CE sing N N 307 LYS CD HD2 sing N N 308 LYS CD HD3 sing N N 309 LYS CE NZ sing N N 310 LYS CE HE2 sing N N 311 LYS CE HE3 sing N N 312 LYS NZ HZ1 sing N N 313 LYS NZ HZ2 sing N N 314 LYS NZ HZ3 sing N N 315 LYS OXT HXT sing N N 316 MET N CA sing N N 317 MET N H sing N N 318 MET N H2 sing N N 319 MET CA C sing N N 320 MET CA CB sing N N 321 MET CA HA sing N N 322 MET C O doub N N 323 MET C OXT sing N N 324 MET CB CG sing N N 325 MET CB HB2 sing N N 326 MET CB HB3 sing N N 327 MET CG SD sing N N 328 MET CG HG2 sing N N 329 MET CG HG3 sing N N 330 MET SD CE sing N N 331 MET CE HE1 sing N N 332 MET CE HE2 sing N N 333 MET CE HE3 sing N N 334 MET OXT HXT sing N N 335 PHE N CA sing N N 336 PHE N H sing N N 337 PHE N H2 sing N N 338 PHE CA C sing N N 339 PHE CA CB sing N N 340 PHE CA HA sing N N 341 PHE C O doub N N 342 PHE C OXT sing N N 343 PHE CB CG sing N N 344 PHE CB HB2 sing N N 345 PHE CB HB3 sing N N 346 PHE CG CD1 doub Y N 347 PHE CG CD2 sing Y N 348 PHE CD1 CE1 sing Y N 349 PHE CD1 HD1 sing N N 350 PHE CD2 CE2 doub Y N 351 PHE CD2 HD2 sing N N 352 PHE CE1 CZ doub Y N 353 PHE CE1 HE1 sing N N 354 PHE CE2 CZ sing Y N 355 PHE CE2 HE2 sing N N 356 PHE CZ HZ sing N N 357 PHE OXT HXT sing N N 358 PRO N CA sing N N 359 PRO N CD sing N N 360 PRO N H sing N N 361 PRO CA C sing N N 362 PRO CA CB sing N N 363 PRO CA HA sing N N 364 PRO C O doub N N 365 PRO C OXT sing N N 366 PRO CB CG sing N N 367 PRO CB HB2 sing N N 368 PRO CB HB3 sing N N 369 PRO CG CD sing N N 370 PRO CG HG2 sing N N 371 PRO CG HG3 sing N N 372 PRO CD HD2 sing N N 373 PRO CD HD3 sing N N 374 PRO OXT HXT sing N N 375 SER N CA sing N N 376 SER N H sing N N 377 SER N H2 sing N N 378 SER CA C sing N N 379 SER CA CB sing N N 380 SER CA HA sing N N 381 SER C O doub N N 382 SER C OXT sing N N 383 SER CB OG sing N N 384 SER CB HB2 sing N N 385 SER CB HB3 sing N N 386 SER OG HG sing N N 387 SER OXT HXT sing N N 388 THR N CA sing N N 389 THR N H sing N N 390 THR N H2 sing N N 391 THR CA C sing N N 392 THR CA CB sing N N 393 THR CA HA sing N N 394 THR C O doub N N 395 THR C OXT sing N N 396 THR CB OG1 sing N N 397 THR CB CG2 sing N N 398 THR CB HB sing N N 399 THR OG1 HG1 sing N N 400 THR CG2 HG21 sing N N 401 THR CG2 HG22 sing N N 402 THR CG2 HG23 sing N N 403 THR OXT HXT sing N N 404 TRP N CA sing N N 405 TRP N H sing N N 406 TRP N H2 sing N N 407 TRP CA C sing N N 408 TRP CA CB sing N N 409 TRP CA HA sing N N 410 TRP C O doub N N 411 TRP C OXT sing N N 412 TRP CB CG sing N N 413 TRP CB HB2 sing N N 414 TRP CB HB3 sing N N 415 TRP CG CD1 doub Y N 416 TRP CG CD2 sing Y N 417 TRP CD1 NE1 sing Y N 418 TRP CD1 HD1 sing N N 419 TRP CD2 CE2 doub Y N 420 TRP CD2 CE3 sing Y N 421 TRP NE1 CE2 sing Y N 422 TRP NE1 HE1 sing N N 423 TRP CE2 CZ2 sing Y N 424 TRP CE3 CZ3 doub Y N 425 TRP CE3 HE3 sing N N 426 TRP CZ2 CH2 doub Y N 427 TRP CZ2 HZ2 sing N N 428 TRP CZ3 CH2 sing Y N 429 TRP CZ3 HZ3 sing N N 430 TRP CH2 HH2 sing N N 431 TRP OXT HXT sing N N 432 TYR N CA sing N N 433 TYR N H sing N N 434 TYR N H2 sing N N 435 TYR CA C sing N N 436 TYR CA CB sing N N 437 TYR CA HA sing N N 438 TYR C O doub N N 439 TYR C OXT sing N N 440 TYR CB CG sing N N 441 TYR CB HB2 sing N N 442 TYR CB HB3 sing N N 443 TYR CG CD1 doub Y N 444 TYR CG CD2 sing Y N 445 TYR CD1 CE1 sing Y N 446 TYR CD1 HD1 sing N N 447 TYR CD2 CE2 doub Y N 448 TYR CD2 HD2 sing N N 449 TYR CE1 CZ doub Y N 450 TYR CE1 HE1 sing N N 451 TYR CE2 CZ sing Y N 452 TYR CE2 HE2 sing N N 453 TYR CZ OH sing N N 454 TYR OH HH sing N N 455 TYR OXT HXT sing N N 456 UTP PA O1A doub N N 457 UTP PA O2A sing N N 458 UTP PA O3A sing N N 459 UTP PA "O5'" sing N N 460 UTP O2A H2A sing N N 461 UTP O3A PB sing N N 462 UTP "O5'" "C5'" sing N N 463 UTP PB O1B sing N N 464 UTP PB O2B doub N N 465 UTP PB O3B sing N N 466 UTP O1B H1B sing N N 467 UTP O3B PG sing N N 468 UTP PG O1G sing N N 469 UTP PG O2G doub N N 470 UTP PG O3G sing N N 471 UTP O1G H1G sing N N 472 UTP O3G H3G sing N N 473 UTP "C5'" "C4'" sing N N 474 UTP "C5'" "H5'1" sing N N 475 UTP "C5'" "H5'2" sing N N 476 UTP "C4'" "O4'" sing N N 477 UTP "C4'" "C3'" sing N N 478 UTP "C4'" "H4'" sing N N 479 UTP "O4'" "C1'" sing N N 480 UTP "C1'" "C2'" sing N N 481 UTP "C1'" N1 sing N N 482 UTP "C1'" "H1'" sing N N 483 UTP "C2'" "O2'" sing N N 484 UTP "C2'" "C3'" sing N N 485 UTP "C2'" "H2'" sing N N 486 UTP "O2'" HA sing N N 487 UTP "C3'" "O3'" sing N N 488 UTP "C3'" "H3'" sing N N 489 UTP "O3'" HB sing N N 490 UTP N1 C6 sing Y N 491 UTP N1 C2 sing Y N 492 UTP C6 C5 doub Y N 493 UTP C6 H6 sing N N 494 UTP C2 O2 doub N N 495 UTP C2 N3 sing Y N 496 UTP N3 C4 sing Y N 497 UTP N3 H3 sing N N 498 UTP C4 O4 doub N N 499 UTP C4 C5 sing Y N 500 UTP C5 H5 sing N N 501 VAL N CA sing N N 502 VAL N H sing N N 503 VAL N H2 sing N N 504 VAL CA C sing N N 505 VAL CA CB sing N N 506 VAL CA HA sing N N 507 VAL C O doub N N 508 VAL C OXT sing N N 509 VAL CB CG1 sing N N 510 VAL CB CG2 sing N N 511 VAL CB HB sing N N 512 VAL CG1 HG11 sing N N 513 VAL CG1 HG12 sing N N 514 VAL CG1 HG13 sing N N 515 VAL CG2 HG21 sing N N 516 VAL CG2 HG22 sing N N 517 VAL CG2 HG23 sing N N 518 VAL OXT HXT sing N N 519 # _ndb_struct_conf_na.entry_id 3PKY _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 5 1_555 -0.314 -0.045 -0.078 -17.125 -5.143 5.531 1 C_DG1:DC5_D C 1 ? D 5 ? 19 1 1 C DC 2 1_555 D DG 4 1_555 0.119 -0.359 -0.021 -0.062 -7.845 -0.463 2 C_DC2:DG4_D C 2 ? D 4 ? 19 1 1 C DG 3 1_555 D DC 3 1_555 0.674 -0.174 0.321 15.716 -6.590 4.125 3 C_DG3:DC3_D C 3 ? D 3 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 5 1_555 C DC 2 1_555 D DG 4 1_555 -0.640 0.291 2.911 -2.155 8.627 25.723 -1.360 0.867 2.897 18.680 4.667 27.192 1 CC_DG1DC2:DG4DC5_DD C 1 ? D 5 ? C 2 ? D 4 ? 1 C DC 2 1_555 D DG 4 1_555 C DG 3 1_555 D DC 3 1_555 0.462 0.779 2.992 -0.984 8.807 29.541 -0.162 -1.052 3.075 16.801 1.877 30.813 2 CC_DC2DG3:DC3DG4_DD C 2 ? D 4 ? C 3 ? D 3 ? # _atom_sites.entry_id 3PKY _atom_sites.fract_transf_matrix[1][1] 0.006863 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006863 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022242 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MN N O P S # loop_