data_3QXX # _entry.id 3QXX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3QXX pdb_00003qxx 10.2210/pdb3qxx/pdb RCSB RCSB064242 ? ? WWPDB D_1000064242 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetDB APC5858 . unspecified PDB 2QMO 'Crystal structure of dethiobiotin synthetase (bioD) from Helicobacter pylori' unspecified PDB 3MLE 'Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori cocrystallized with ATP' unspecified PDB 3QXC 'Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with ATP' unspecified PDB 3QXH 'Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with ADP and 8-aminocaprylic acid' unspecified PDB 3QXJ 'Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GTP' unspecified PDB 3QXS 'Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with ANP' unspecified PDB 3QY0 'Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GDP' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3QXX _pdbx_database_status.recvd_initial_deposition_date 2011-03-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Porebski, P.J.' 1 ? 'Klimecka, M.M.' 2 ? 'Chruszcz, M.' 3 ? 'Murzyn, K.' 4 ? 'Joachimiak, A.' 5 ? 'Minor, W.' 6 0000-0001-7075-7090 'Midwest Center for Structural Genomics (MCSG)' 7 ? # _citation.id primary _citation.title 'Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members.' _citation.journal_abbrev 'Febs J.' _citation.journal_volume 279 _citation.page_first 1093 _citation.page_last 1105 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22284390 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2012.08506.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Porebski, P.J.' 1 ? primary 'Klimecka, M.' 2 ? primary 'Chruszcz, M.' 3 ? primary 'Nicholls, R.A.' 4 ? primary 'Murzyn, K.' 5 ? primary 'Cuff, M.E.' 6 ? primary 'Xu, X.' 7 ? primary 'Cymborowski, M.' 8 ? primary 'Murshudov, G.N.' 9 ? primary 'Savchenko, A.' 10 ? primary 'Edwards, A.' 11 ? primary 'Minor, W.' 12 0000-0001-7075-7090 # _cell.entry_id 3QXX _cell.length_a 81.883 _cell.length_b 37.845 _cell.length_c 68.839 _cell.angle_alpha 90.00 _cell.angle_beta 101.30 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3QXX _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dethiobiotin synthetase' 27148.088 1 6.3.3.3 ? ? ? 2 non-polymer syn '8-aminooctanoic acid' 159.226 1 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 6 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 7 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 8 water nat water 18.015 341 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DTB synthetase, DTBS, Dethiobiotin synthase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGRENLYFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDN RLLDRSLTLKDISFYRYHKVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKL KAKMLLISHDNLGLINDCLLNDFLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVLMSFALK GS ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGRENLYFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDN RLLDRSLTLKDISFYRYHKVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKL KAKMLLISHDNLGLINDCLLNDFLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVLMSFALK GS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC5858 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 ARG n 1 15 GLU n 1 16 ASN n 1 17 LEU n 1 18 TYR n 1 19 PHE n 1 20 GLN n 1 21 GLY n 1 22 HIS n 1 23 MET n 1 24 LEU n 1 25 PHE n 1 26 ILE n 1 27 SER n 1 28 ALA n 1 29 THR n 1 30 ASN n 1 31 THR n 1 32 ASN n 1 33 ALA n 1 34 GLY n 1 35 LYS n 1 36 THR n 1 37 THR n 1 38 CYS n 1 39 ALA n 1 40 ARG n 1 41 LEU n 1 42 LEU n 1 43 ALA n 1 44 GLN n 1 45 TYR n 1 46 CYS n 1 47 ASN n 1 48 ALA n 1 49 CYS n 1 50 GLY n 1 51 VAL n 1 52 LYS n 1 53 THR n 1 54 ILE n 1 55 LEU n 1 56 LEU n 1 57 LYS n 1 58 PRO n 1 59 ILE n 1 60 GLU n 1 61 THR n 1 62 GLY n 1 63 VAL n 1 64 ASN n 1 65 ASP n 1 66 ALA n 1 67 ILE n 1 68 ASN n 1 69 HIS n 1 70 SER n 1 71 SER n 1 72 ASP n 1 73 ALA n 1 74 HIS n 1 75 LEU n 1 76 PHE n 1 77 LEU n 1 78 GLN n 1 79 ASP n 1 80 ASN n 1 81 ARG n 1 82 LEU n 1 83 LEU n 1 84 ASP n 1 85 ARG n 1 86 SER n 1 87 LEU n 1 88 THR n 1 89 LEU n 1 90 LYS n 1 91 ASP n 1 92 ILE n 1 93 SER n 1 94 PHE n 1 95 TYR n 1 96 ARG n 1 97 TYR n 1 98 HIS n 1 99 LYS n 1 100 VAL n 1 101 SER n 1 102 ALA n 1 103 PRO n 1 104 LEU n 1 105 ILE n 1 106 ALA n 1 107 GLN n 1 108 GLN n 1 109 GLU n 1 110 GLU n 1 111 ASP n 1 112 PRO n 1 113 ASN n 1 114 ALA n 1 115 PRO n 1 116 ILE n 1 117 ASP n 1 118 THR n 1 119 ASP n 1 120 ASN n 1 121 LEU n 1 122 THR n 1 123 GLN n 1 124 ARG n 1 125 LEU n 1 126 HIS n 1 127 ASN n 1 128 PHE n 1 129 THR n 1 130 LYS n 1 131 THR n 1 132 TYR n 1 133 ASP n 1 134 LEU n 1 135 VAL n 1 136 ILE n 1 137 VAL n 1 138 GLU n 1 139 GLY n 1 140 ALA n 1 141 GLY n 1 142 GLY n 1 143 LEU n 1 144 CYS n 1 145 VAL n 1 146 PRO n 1 147 ILE n 1 148 THR n 1 149 LEU n 1 150 GLU n 1 151 GLU n 1 152 ASN n 1 153 MET n 1 154 LEU n 1 155 ASP n 1 156 PHE n 1 157 ALA n 1 158 LEU n 1 159 LYS n 1 160 LEU n 1 161 LYS n 1 162 ALA n 1 163 LYS n 1 164 MET n 1 165 LEU n 1 166 LEU n 1 167 ILE n 1 168 SER n 1 169 HIS n 1 170 ASP n 1 171 ASN n 1 172 LEU n 1 173 GLY n 1 174 LEU n 1 175 ILE n 1 176 ASN n 1 177 ASP n 1 178 CYS n 1 179 LEU n 1 180 LEU n 1 181 ASN n 1 182 ASP n 1 183 PHE n 1 184 LEU n 1 185 LEU n 1 186 LYS n 1 187 SER n 1 188 HIS n 1 189 GLN n 1 190 LEU n 1 191 ASP n 1 192 TYR n 1 193 LYS n 1 194 ILE n 1 195 ALA n 1 196 ILE n 1 197 ASN n 1 198 LEU n 1 199 LYS n 1 200 GLY n 1 201 ASN n 1 202 ASN n 1 203 THR n 1 204 ALA n 1 205 PHE n 1 206 HIS n 1 207 SER n 1 208 ILE n 1 209 SER n 1 210 LEU n 1 211 PRO n 1 212 TYR n 1 213 ILE n 1 214 GLU n 1 215 LEU n 1 216 PHE n 1 217 ASN n 1 218 THR n 1 219 ARG n 1 220 SER n 1 221 ASN n 1 222 ASN n 1 223 PRO n 1 224 ILE n 1 225 VAL n 1 226 ILE n 1 227 PHE n 1 228 GLN n 1 229 GLN n 1 230 SER n 1 231 LEU n 1 232 LYS n 1 233 VAL n 1 234 LEU n 1 235 MET n 1 236 SER n 1 237 PHE n 1 238 ALA n 1 239 LEU n 1 240 LYS n 1 241 GLY n 1 242 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Campylobacter pylori' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'bioD, hp0029, HP_0029' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 26695 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Helicobacter pylori' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 85962 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21 Gold(de3) Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BIOD_HELPY _struct_ref.pdbx_db_accession O24872 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKVSA PLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLLND FLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVLMSFALK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3QXX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 23 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 240 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O24872 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 218 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 218 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3QXX MET A 1 ? UNP O24872 ? ? 'expression tag' -21 1 1 3QXX GLY A 2 ? UNP O24872 ? ? 'expression tag' -20 2 1 3QXX SER A 3 ? UNP O24872 ? ? 'expression tag' -19 3 1 3QXX SER A 4 ? UNP O24872 ? ? 'expression tag' -18 4 1 3QXX HIS A 5 ? UNP O24872 ? ? 'expression tag' -17 5 1 3QXX HIS A 6 ? UNP O24872 ? ? 'expression tag' -16 6 1 3QXX HIS A 7 ? UNP O24872 ? ? 'expression tag' -15 7 1 3QXX HIS A 8 ? UNP O24872 ? ? 'expression tag' -14 8 1 3QXX HIS A 9 ? UNP O24872 ? ? 'expression tag' -13 9 1 3QXX HIS A 10 ? UNP O24872 ? ? 'expression tag' -12 10 1 3QXX SER A 11 ? UNP O24872 ? ? 'expression tag' -11 11 1 3QXX SER A 12 ? UNP O24872 ? ? 'expression tag' -10 12 1 3QXX GLY A 13 ? UNP O24872 ? ? 'expression tag' -9 13 1 3QXX ARG A 14 ? UNP O24872 ? ? 'expression tag' -8 14 1 3QXX GLU A 15 ? UNP O24872 ? ? 'expression tag' -7 15 1 3QXX ASN A 16 ? UNP O24872 ? ? 'expression tag' -6 16 1 3QXX LEU A 17 ? UNP O24872 ? ? 'expression tag' -5 17 1 3QXX TYR A 18 ? UNP O24872 ? ? 'expression tag' -4 18 1 3QXX PHE A 19 ? UNP O24872 ? ? 'expression tag' -3 19 1 3QXX GLN A 20 ? UNP O24872 ? ? 'expression tag' -2 20 1 3QXX GLY A 21 ? UNP O24872 ? ? 'expression tag' -1 21 1 3QXX HIS A 22 ? UNP O24872 ? ? 'expression tag' 0 22 1 3QXX GLY A 241 ? UNP O24872 ? ? 'expression tag' 219 23 1 3QXX SER A 242 ? UNP O24872 ? ? 'expression tag' 220 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8AC non-polymer . '8-aminooctanoic acid' '8-aminocaprylic acid' 'C8 H17 N O2' 159.226 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3QXX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.93 _exptl_crystal.density_percent_sol 36.15 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details ;20% PEG3350; 100 MM NH4NO3; 100 MM BIS-TRIS; 5% GLYCEROL; SOAKED WITH 10 MM GDP, 10 MM MGCL2, 10 MM 8-AMINOOCTANOIC ACID; IN SITU PROTEOLYSIS - CHYMOTRYPSIN, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-3 _diffrn_detector.pdbx_collection_date 2008-07-11 _diffrn_detector.details MIRROR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI-111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9793 # _reflns.entry_id 3QXX _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.36 _reflns.number_obs 43768 _reflns.number_all 43768 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rsym_value 0.061 _reflns.pdbx_netI_over_sigmaI 29.5 _reflns.B_iso_Wilson_estimate 14.7 _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.36 _reflns_shell.d_res_low 1.38 _reflns_shell.percent_possible_all 86.6 _reflns_shell.Rmerge_I_obs 0.386 _reflns_shell.pdbx_Rsym_value 0.386 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1884 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3QXX _refine.ls_number_reflns_obs 41560 _refine.ls_number_reflns_all 41560 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 1.36 _refine.ls_percent_reflns_obs 97.92 _refine.ls_R_factor_obs 0.13125 _refine.ls_R_factor_all 0.13125 _refine.ls_R_factor_R_work 0.12960 _refine.ls_R_factor_R_free 0.16171 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2205 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.971 _refine.B_iso_mean 11.494 _refine.aniso_B[1][1] -0.70 _refine.aniso_B[2][2] 0.13 _refine.aniso_B[3][3] 0.30 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.71 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 2QMO' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.052 _refine.overall_SU_ML 0.028 _refine.overall_SU_B 1.317 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1744 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 76 _refine_hist.number_atoms_solvent 341 _refine_hist.number_atoms_total 2161 _refine_hist.d_res_high 1.36 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 1935 'X-RAY DIFFRACTION' ? r_bond_other_d 0.000 0.020 ? 1294 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.683 2.004 ? 2629 'X-RAY DIFFRACTION' ? r_angle_other_deg 3.719 3.000 ? 3198 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.181 5.000 ? 246 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.234 25.244 ? 82 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.412 15.000 ? 340 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.452 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.126 0.200 ? 307 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 2114 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.011 0.020 ? 361 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.045 1.500 ? 1168 'X-RAY DIFFRACTION' ? r_mcbond_other 2.281 1.500 ? 467 'X-RAY DIFFRACTION' ? r_mcangle_it 2.784 2.000 ? 1900 'X-RAY DIFFRACTION' ? r_scbond_it 4.069 3.000 ? 767 'X-RAY DIFFRACTION' ? r_scangle_it 5.528 4.500 ? 722 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.300 3.000 ? 1868 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.360 _refine_ls_shell.d_res_low 1.396 _refine_ls_shell.number_reflns_R_work 2679 _refine_ls_shell.R_factor_R_work 0.196 _refine_ls_shell.percent_reflns_obs 86.40 _refine_ls_shell.R_factor_R_free 0.258 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 149 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 2679 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3QXX _struct.title 'Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GDP and 8-aminocaprylic acid' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QXX _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;DTBS, dethiobiotin synthetase, Structural Genomics, PSI-BIOLOGY, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, LIGASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? M N N 7 ? N N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 34 ? CYS A 49 ? GLY A 12 CYS A 27 1 ? 16 HELX_P HELX_P2 2 SER A 71 ? ARG A 81 ? SER A 49 ARG A 59 1 ? 11 HELX_P HELX_P3 3 THR A 88 ? SER A 93 ? THR A 66 SER A 71 1 ? 6 HELX_P HELX_P4 4 ALA A 102 ? ASP A 111 ? ALA A 80 ASP A 89 1 ? 10 HELX_P HELX_P5 5 ASP A 117 ? PHE A 128 ? ASP A 95 PHE A 106 1 ? 12 HELX_P HELX_P6 6 THR A 129 ? THR A 131 ? THR A 107 THR A 109 5 ? 3 HELX_P HELX_P7 7 ASN A 152 ? LYS A 161 ? ASN A 130 LYS A 139 1 ? 10 HELX_P HELX_P8 8 GLY A 173 ? SER A 187 ? GLY A 151 SER A 165 1 ? 15 HELX_P HELX_P9 9 THR A 203 ? SER A 209 ? THR A 181 SER A 187 1 ? 7 HELX_P HELX_P10 10 SER A 209 ? SER A 220 ? SER A 187 SER A 198 1 ? 12 HELX_P HELX_P11 11 SER A 230 ? LYS A 240 ? SER A 208 LYS A 218 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 36 OG1 ? ? ? 1_555 E MG . MG ? ? A THR 14 A MG 224 1_555 ? ? ? ? ? ? ? 2.196 ? ? metalc2 metalc ? ? A ASP 72 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 50 A MG 224 1_555 ? ? ? ? ? ? ? 2.111 ? ? metalc3 metalc ? ? A GLU 138 OE2 ? ? ? 1_555 E MG . MG ? ? A GLU 116 A MG 224 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc4 metalc ? ? C GDP . O1B ? ? ? 1_555 D MG . MG ? ? A GDP 222 A MG 223 1_555 ? ? ? ? ? ? ? 2.013 ? ? metalc5 metalc ? ? C GDP . O3B ? ? ? 1_555 E MG . MG ? ? A GDP 222 A MG 224 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 F PO4 . O3 ? ? A MG 223 A PO4 225 1_555 ? ? ? ? ? ? ? 1.970 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 223 A HOH 269 1_555 ? ? ? ? ? ? ? 2.201 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 223 A HOH 289 1_555 ? ? ? ? ? ? ? 2.152 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 223 A HOH 290 1_555 ? ? ? ? ? ? ? 2.126 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 223 A HOH 517 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 F PO4 . O1 ? ? A MG 224 A PO4 225 1_555 ? ? ? ? ? ? ? 2.073 ? ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 224 A HOH 517 1_555 ? ? ? ? ? ? ? 2.189 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 53 ? LEU A 56 ? THR A 31 LEU A 34 A 2 LEU A 134 ? GLU A 138 ? LEU A 112 GLU A 116 A 3 HIS A 22 ? ALA A 28 ? HIS A 0 ALA A 6 A 4 LYS A 163 ? SER A 168 ? LYS A 141 SER A 146 A 5 TYR A 192 ? ILE A 196 ? TYR A 170 ILE A 174 A 6 VAL A 225 ? ILE A 226 ? VAL A 203 ILE A 204 B 1 ILE A 59 ? GLU A 60 ? ILE A 37 GLU A 38 B 2 TYR A 95 ? ARG A 96 ? TYR A 73 ARG A 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 56 ? N LEU A 34 O ILE A 136 ? O ILE A 114 A 2 3 O VAL A 137 ? O VAL A 115 N ILE A 26 ? N ILE A 4 A 3 4 N PHE A 25 ? N PHE A 3 O LYS A 163 ? O LYS A 141 A 4 5 N LEU A 166 ? N LEU A 144 O LYS A 193 ? O LYS A 171 A 5 6 N ILE A 196 ? N ILE A 174 O VAL A 225 ? O VAL A 203 B 1 2 N GLU A 60 ? N GLU A 38 O TYR A 95 ? O TYR A 73 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 8AC 221 ? 13 'BINDING SITE FOR RESIDUE 8AC A 221' AC2 Software A GDP 222 ? 20 'BINDING SITE FOR RESIDUE GDP A 222' AC3 Software A MG 223 ? 7 'BINDING SITE FOR RESIDUE MG A 223' AC4 Software A MG 224 ? 8 'BINDING SITE FOR RESIDUE MG A 224' AC5 Software A PO4 225 ? 15 'BINDING SITE FOR RESIDUE PO4 A 225' AC6 Software A EDO 226 ? 4 'BINDING SITE FOR RESIDUE EDO A 226' AC7 Software A EDO 227 ? 5 'BINDING SITE FOR RESIDUE EDO A 227' AC8 Software A EDO 228 ? 5 'BINDING SITE FOR RESIDUE EDO A 228' AC9 Software A EDO 229 ? 7 'BINDING SITE FOR RESIDUE EDO A 229' BC1 Software A EDO 230 ? 3 'BINDING SITE FOR RESIDUE EDO A 230' BC2 Software A EDO 231 ? 3 'BINDING SITE FOR RESIDUE EDO A 231' BC3 Software A GOL 232 ? 5 'BINDING SITE FOR RESIDUE GOL A 232' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 THR A 31 ? THR A 9 . ? 1_555 ? 2 AC1 13 THR A 61 ? THR A 39 . ? 1_555 ? 3 AC1 13 SER A 101 ? SER A 79 . ? 1_555 ? 4 AC1 13 VAL A 145 ? VAL A 123 . ? 1_555 ? 5 AC1 13 GLY A 173 ? GLY A 151 . ? 2_554 ? 6 AC1 13 LEU A 174 ? LEU A 152 . ? 2_554 ? 7 AC1 13 ILE A 175 ? ILE A 153 . ? 2_554 ? 8 AC1 13 ASN A 176 ? ASN A 154 . ? 2_554 ? 9 AC1 13 PO4 F . ? PO4 A 225 . ? 1_555 ? 10 AC1 13 HOH N . ? HOH A 252 . ? 2_554 ? 11 AC1 13 HOH N . ? HOH A 291 . ? 1_555 ? 12 AC1 13 HOH N . ? HOH A 293 . ? 1_555 ? 13 AC1 13 HOH N . ? HOH A 377 . ? 1_555 ? 14 AC2 20 ASN A 32 ? ASN A 10 . ? 1_555 ? 15 AC2 20 ALA A 33 ? ALA A 11 . ? 1_555 ? 16 AC2 20 GLY A 34 ? GLY A 12 . ? 1_555 ? 17 AC2 20 LYS A 35 ? LYS A 13 . ? 1_555 ? 18 AC2 20 THR A 36 ? THR A 14 . ? 1_555 ? 19 AC2 20 THR A 37 ? THR A 15 . ? 1_555 ? 20 AC2 20 GLU A 138 ? GLU A 116 . ? 1_555 ? 21 AC2 20 ASN A 197 ? ASN A 175 . ? 1_555 ? 22 AC2 20 LYS A 199 ? LYS A 177 . ? 1_555 ? 23 AC2 20 GLY A 200 ? GLY A 178 . ? 1_555 ? 24 AC2 20 MG D . ? MG A 223 . ? 1_555 ? 25 AC2 20 MG E . ? MG A 224 . ? 1_555 ? 26 AC2 20 PO4 F . ? PO4 A 225 . ? 1_555 ? 27 AC2 20 HOH N . ? HOH A 261 . ? 1_555 ? 28 AC2 20 HOH N . ? HOH A 269 . ? 1_555 ? 29 AC2 20 HOH N . ? HOH A 290 . ? 1_555 ? 30 AC2 20 HOH N . ? HOH A 303 . ? 1_555 ? 31 AC2 20 HOH N . ? HOH A 413 . ? 1_555 ? 32 AC2 20 HOH N . ? HOH A 517 . ? 1_555 ? 33 AC2 20 HOH N . ? HOH A 534 . ? 1_555 ? 34 AC3 7 GDP C . ? GDP A 222 . ? 1_555 ? 35 AC3 7 MG E . ? MG A 224 . ? 1_555 ? 36 AC3 7 PO4 F . ? PO4 A 225 . ? 1_555 ? 37 AC3 7 HOH N . ? HOH A 269 . ? 1_555 ? 38 AC3 7 HOH N . ? HOH A 289 . ? 1_555 ? 39 AC3 7 HOH N . ? HOH A 290 . ? 1_555 ? 40 AC3 7 HOH N . ? HOH A 517 . ? 1_555 ? 41 AC4 8 THR A 36 ? THR A 14 . ? 1_555 ? 42 AC4 8 LYS A 57 ? LYS A 35 . ? 1_555 ? 43 AC4 8 ASP A 72 ? ASP A 50 . ? 1_555 ? 44 AC4 8 GLU A 138 ? GLU A 116 . ? 1_555 ? 45 AC4 8 GDP C . ? GDP A 222 . ? 1_555 ? 46 AC4 8 MG D . ? MG A 223 . ? 1_555 ? 47 AC4 8 PO4 F . ? PO4 A 225 . ? 1_555 ? 48 AC4 8 HOH N . ? HOH A 517 . ? 1_555 ? 49 AC5 15 THR A 31 ? THR A 9 . ? 1_555 ? 50 AC5 15 LYS A 35 ? LYS A 13 . ? 1_555 ? 51 AC5 15 LYS A 57 ? LYS A 35 . ? 1_555 ? 52 AC5 15 ASP A 72 ? ASP A 50 . ? 1_555 ? 53 AC5 15 GLU A 138 ? GLU A 116 . ? 1_555 ? 54 AC5 15 ALA A 140 ? ALA A 118 . ? 1_555 ? 55 AC5 15 GLY A 141 ? GLY A 119 . ? 1_555 ? 56 AC5 15 8AC B . ? 8AC A 221 . ? 1_555 ? 57 AC5 15 GDP C . ? GDP A 222 . ? 1_555 ? 58 AC5 15 MG D . ? MG A 223 . ? 1_555 ? 59 AC5 15 MG E . ? MG A 224 . ? 1_555 ? 60 AC5 15 HOH N . ? HOH A 255 . ? 1_555 ? 61 AC5 15 HOH N . ? HOH A 289 . ? 1_555 ? 62 AC5 15 HOH N . ? HOH A 290 . ? 1_555 ? 63 AC5 15 HOH N . ? HOH A 493 . ? 1_555 ? 64 AC6 4 ASN A 64 ? ASN A 42 . ? 1_555 ? 65 AC6 4 ASP A 65 ? ASP A 43 . ? 1_555 ? 66 AC6 4 ARG A 96 ? ARG A 74 . ? 1_555 ? 67 AC6 4 HIS A 98 ? HIS A 76 . ? 1_555 ? 68 AC7 5 HIS A 22 ? HIS A 0 . ? 1_555 ? 69 AC7 5 MET A 23 ? MET A 1 . ? 1_555 ? 70 AC7 5 LYS A 161 ? LYS A 139 . ? 1_555 ? 71 AC7 5 LYS A 163 ? LYS A 141 . ? 1_555 ? 72 AC7 5 SER A 242 ? SER A 220 . ? 1_555 ? 73 AC8 5 LYS A 193 ? LYS A 171 . ? 4_544 ? 74 AC8 5 ASN A 222 ? ASN A 200 . ? 4_544 ? 75 AC8 5 PRO A 223 ? PRO A 201 . ? 4_544 ? 76 AC8 5 HOH N . ? HOH A 474 . ? 1_555 ? 77 AC8 5 HOH N . ? HOH A 511 . ? 1_555 ? 78 AC9 7 PHE A 94 ? PHE A 72 . ? 1_555 ? 79 AC9 7 TYR A 95 ? TYR A 73 . ? 1_555 ? 80 AC9 7 ARG A 96 ? ARG A 74 . ? 1_555 ? 81 AC9 7 TYR A 97 ? TYR A 75 . ? 1_555 ? 82 AC9 7 ASP A 111 ? ASP A 89 . ? 1_555 ? 83 AC9 7 HOH N . ? HOH A 314 . ? 1_555 ? 84 AC9 7 HOH N . ? HOH A 555 . ? 1_555 ? 85 BC1 3 GLN A 44 ? GLN A 22 . ? 1_555 ? 86 BC1 3 ASP A 79 ? ASP A 57 . ? 1_555 ? 87 BC1 3 HOH N . ? HOH A 557 . ? 1_555 ? 88 BC2 3 TYR A 95 ? TYR A 73 . ? 1_555 ? 89 BC2 3 ALA A 114 ? ALA A 92 . ? 1_555 ? 90 BC2 3 PRO A 115 ? PRO A 93 . ? 1_555 ? 91 BC3 5 ASN A 152 ? ASN A 130 . ? 1_555 ? 92 BC3 5 ASP A 155 ? ASP A 133 . ? 1_555 ? 93 BC3 5 HIS A 188 ? HIS A 166 . ? 1_555 ? 94 BC3 5 HOH N . ? HOH A 285 . ? 2_554 ? 95 BC3 5 HOH N . ? HOH A 397 . ? 1_555 ? # _database_PDB_matrix.entry_id 3QXX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3QXX _atom_sites.fract_transf_matrix[1][1] 0.012213 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002439 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026424 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014814 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -21 ? ? ? A . n A 1 2 GLY 2 -20 ? ? ? A . n A 1 3 SER 3 -19 ? ? ? A . n A 1 4 SER 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 HIS 8 -14 ? ? ? A . n A 1 9 HIS 9 -13 ? ? ? A . n A 1 10 HIS 10 -12 ? ? ? A . n A 1 11 SER 11 -11 ? ? ? A . n A 1 12 SER 12 -10 ? ? ? A . n A 1 13 GLY 13 -9 ? ? ? A . n A 1 14 ARG 14 -8 ? ? ? A . n A 1 15 GLU 15 -7 ? ? ? A . n A 1 16 ASN 16 -6 ? ? ? A . n A 1 17 LEU 17 -5 ? ? ? A . n A 1 18 TYR 18 -4 ? ? ? A . n A 1 19 PHE 19 -3 -3 PHE PHE A . n A 1 20 GLN 20 -2 -2 GLN GLN A . n A 1 21 GLY 21 -1 -1 GLY GLY A . n A 1 22 HIS 22 0 0 HIS HIS A . n A 1 23 MET 23 1 1 MET MET A . n A 1 24 LEU 24 2 2 LEU LEU A . n A 1 25 PHE 25 3 3 PHE PHE A . n A 1 26 ILE 26 4 4 ILE ILE A . n A 1 27 SER 27 5 5 SER SER A . n A 1 28 ALA 28 6 6 ALA ALA A . n A 1 29 THR 29 7 7 THR THR A . n A 1 30 ASN 30 8 8 ASN ASN A . n A 1 31 THR 31 9 9 THR THR A . n A 1 32 ASN 32 10 10 ASN ASN A . n A 1 33 ALA 33 11 11 ALA ALA A . n A 1 34 GLY 34 12 12 GLY GLY A . n A 1 35 LYS 35 13 13 LYS LYS A . n A 1 36 THR 36 14 14 THR THR A . n A 1 37 THR 37 15 15 THR THR A . n A 1 38 CYS 38 16 16 CYS CYS A . n A 1 39 ALA 39 17 17 ALA ALA A . n A 1 40 ARG 40 18 18 ARG ARG A . n A 1 41 LEU 41 19 19 LEU LEU A . n A 1 42 LEU 42 20 20 LEU LEU A . n A 1 43 ALA 43 21 21 ALA ALA A . n A 1 44 GLN 44 22 22 GLN GLN A . n A 1 45 TYR 45 23 23 TYR TYR A . n A 1 46 CYS 46 24 24 CYS CYS A . n A 1 47 ASN 47 25 25 ASN ASN A . n A 1 48 ALA 48 26 26 ALA ALA A . n A 1 49 CYS 49 27 27 CYS CYS A . n A 1 50 GLY 50 28 28 GLY GLY A . n A 1 51 VAL 51 29 29 VAL VAL A . n A 1 52 LYS 52 30 30 LYS LYS A . n A 1 53 THR 53 31 31 THR THR A . n A 1 54 ILE 54 32 32 ILE ILE A . n A 1 55 LEU 55 33 33 LEU LEU A . n A 1 56 LEU 56 34 34 LEU LEU A . n A 1 57 LYS 57 35 35 LYS LYS A . n A 1 58 PRO 58 36 36 PRO PRO A . n A 1 59 ILE 59 37 37 ILE ILE A . n A 1 60 GLU 60 38 38 GLU GLU A . n A 1 61 THR 61 39 39 THR THR A . n A 1 62 GLY 62 40 40 GLY GLY A . n A 1 63 VAL 63 41 41 VAL VAL A . n A 1 64 ASN 64 42 42 ASN ASN A . n A 1 65 ASP 65 43 43 ASP ASP A . n A 1 66 ALA 66 44 44 ALA ALA A . n A 1 67 ILE 67 45 45 ILE ILE A . n A 1 68 ASN 68 46 46 ASN ASN A . n A 1 69 HIS 69 47 47 HIS HIS A . n A 1 70 SER 70 48 48 SER SER A . n A 1 71 SER 71 49 49 SER SER A . n A 1 72 ASP 72 50 50 ASP ASP A . n A 1 73 ALA 73 51 51 ALA ALA A . n A 1 74 HIS 74 52 52 HIS HIS A . n A 1 75 LEU 75 53 53 LEU LEU A . n A 1 76 PHE 76 54 54 PHE PHE A . n A 1 77 LEU 77 55 55 LEU LEU A . n A 1 78 GLN 78 56 56 GLN GLN A . n A 1 79 ASP 79 57 57 ASP ASP A . n A 1 80 ASN 80 58 58 ASN ASN A . n A 1 81 ARG 81 59 59 ARG ARG A . n A 1 82 LEU 82 60 60 LEU LEU A . n A 1 83 LEU 83 61 61 LEU LEU A . n A 1 84 ASP 84 62 62 ASP ASP A . n A 1 85 ARG 85 63 63 ARG ARG A . n A 1 86 SER 86 64 64 SER SER A . n A 1 87 LEU 87 65 65 LEU LEU A . n A 1 88 THR 88 66 66 THR THR A . n A 1 89 LEU 89 67 67 LEU LEU A . n A 1 90 LYS 90 68 68 LYS LYS A . n A 1 91 ASP 91 69 69 ASP ASP A . n A 1 92 ILE 92 70 70 ILE ILE A . n A 1 93 SER 93 71 71 SER SER A . n A 1 94 PHE 94 72 72 PHE PHE A . n A 1 95 TYR 95 73 73 TYR TYR A . n A 1 96 ARG 96 74 74 ARG ARG A . n A 1 97 TYR 97 75 75 TYR TYR A . n A 1 98 HIS 98 76 76 HIS HIS A . n A 1 99 LYS 99 77 77 LYS LYS A . n A 1 100 VAL 100 78 78 VAL VAL A . n A 1 101 SER 101 79 79 SER SER A . n A 1 102 ALA 102 80 80 ALA ALA A . n A 1 103 PRO 103 81 81 PRO PRO A . n A 1 104 LEU 104 82 82 LEU LEU A . n A 1 105 ILE 105 83 83 ILE ILE A . n A 1 106 ALA 106 84 84 ALA ALA A . n A 1 107 GLN 107 85 85 GLN GLN A . n A 1 108 GLN 108 86 86 GLN GLN A . n A 1 109 GLU 109 87 87 GLU GLU A . n A 1 110 GLU 110 88 88 GLU GLU A . n A 1 111 ASP 111 89 89 ASP ASP A . n A 1 112 PRO 112 90 90 PRO PRO A . n A 1 113 ASN 113 91 91 ASN ASN A . n A 1 114 ALA 114 92 92 ALA ALA A . n A 1 115 PRO 115 93 93 PRO PRO A . n A 1 116 ILE 116 94 94 ILE ILE A . n A 1 117 ASP 117 95 95 ASP ASP A . n A 1 118 THR 118 96 96 THR THR A . n A 1 119 ASP 119 97 97 ASP ASP A . n A 1 120 ASN 120 98 98 ASN ASN A . n A 1 121 LEU 121 99 99 LEU LEU A . n A 1 122 THR 122 100 100 THR THR A . n A 1 123 GLN 123 101 101 GLN GLN A . n A 1 124 ARG 124 102 102 ARG ARG A . n A 1 125 LEU 125 103 103 LEU LEU A . n A 1 126 HIS 126 104 104 HIS HIS A . n A 1 127 ASN 127 105 105 ASN ASN A . n A 1 128 PHE 128 106 106 PHE PHE A . n A 1 129 THR 129 107 107 THR THR A . n A 1 130 LYS 130 108 108 LYS LYS A . n A 1 131 THR 131 109 109 THR THR A . n A 1 132 TYR 132 110 110 TYR TYR A . n A 1 133 ASP 133 111 111 ASP ASP A . n A 1 134 LEU 134 112 112 LEU LEU A . n A 1 135 VAL 135 113 113 VAL VAL A . n A 1 136 ILE 136 114 114 ILE ILE A . n A 1 137 VAL 137 115 115 VAL VAL A . n A 1 138 GLU 138 116 116 GLU GLU A . n A 1 139 GLY 139 117 117 GLY GLY A . n A 1 140 ALA 140 118 118 ALA ALA A . n A 1 141 GLY 141 119 119 GLY GLY A . n A 1 142 GLY 142 120 120 GLY GLY A . n A 1 143 LEU 143 121 121 LEU LEU A . n A 1 144 CYS 144 122 122 CYS CYS A . n A 1 145 VAL 145 123 123 VAL VAL A . n A 1 146 PRO 146 124 124 PRO PRO A . n A 1 147 ILE 147 125 125 ILE ILE A . n A 1 148 THR 148 126 126 THR THR A . n A 1 149 LEU 149 127 127 LEU LEU A . n A 1 150 GLU 150 128 128 GLU GLU A . n A 1 151 GLU 151 129 129 GLU GLU A . n A 1 152 ASN 152 130 130 ASN ASN A . n A 1 153 MET 153 131 131 MET MET A . n A 1 154 LEU 154 132 132 LEU LEU A . n A 1 155 ASP 155 133 133 ASP ASP A . n A 1 156 PHE 156 134 134 PHE PHE A . n A 1 157 ALA 157 135 135 ALA ALA A . n A 1 158 LEU 158 136 136 LEU LEU A . n A 1 159 LYS 159 137 137 LYS LYS A . n A 1 160 LEU 160 138 138 LEU LEU A . n A 1 161 LYS 161 139 139 LYS LYS A . n A 1 162 ALA 162 140 140 ALA ALA A . n A 1 163 LYS 163 141 141 LYS LYS A . n A 1 164 MET 164 142 142 MET MET A . n A 1 165 LEU 165 143 143 LEU LEU A . n A 1 166 LEU 166 144 144 LEU LEU A . n A 1 167 ILE 167 145 145 ILE ILE A . n A 1 168 SER 168 146 146 SER SER A . n A 1 169 HIS 169 147 147 HIS HIS A . n A 1 170 ASP 170 148 148 ASP ASP A . n A 1 171 ASN 171 149 149 ASN ASN A . n A 1 172 LEU 172 150 150 LEU LEU A . n A 1 173 GLY 173 151 151 GLY GLY A . n A 1 174 LEU 174 152 152 LEU LEU A . n A 1 175 ILE 175 153 153 ILE ILE A . n A 1 176 ASN 176 154 154 ASN ASN A . n A 1 177 ASP 177 155 155 ASP ASP A . n A 1 178 CYS 178 156 156 CYS CYS A . n A 1 179 LEU 179 157 157 LEU LEU A . n A 1 180 LEU 180 158 158 LEU LEU A . n A 1 181 ASN 181 159 159 ASN ASN A . n A 1 182 ASP 182 160 160 ASP ASP A . n A 1 183 PHE 183 161 161 PHE PHE A . n A 1 184 LEU 184 162 162 LEU LEU A . n A 1 185 LEU 185 163 163 LEU LEU A . n A 1 186 LYS 186 164 164 LYS LYS A . n A 1 187 SER 187 165 165 SER SER A . n A 1 188 HIS 188 166 166 HIS HIS A . n A 1 189 GLN 189 167 167 GLN GLN A . n A 1 190 LEU 190 168 168 LEU LEU A . n A 1 191 ASP 191 169 169 ASP ASP A . n A 1 192 TYR 192 170 170 TYR TYR A . n A 1 193 LYS 193 171 171 LYS LYS A . n A 1 194 ILE 194 172 172 ILE ILE A . n A 1 195 ALA 195 173 173 ALA ALA A . n A 1 196 ILE 196 174 174 ILE ILE A . n A 1 197 ASN 197 175 175 ASN ASN A . n A 1 198 LEU 198 176 176 LEU LEU A . n A 1 199 LYS 199 177 177 LYS LYS A . n A 1 200 GLY 200 178 178 GLY GLY A . n A 1 201 ASN 201 179 179 ASN ASN A . n A 1 202 ASN 202 180 180 ASN ASN A . n A 1 203 THR 203 181 181 THR THR A . n A 1 204 ALA 204 182 182 ALA ALA A . n A 1 205 PHE 205 183 183 PHE PHE A . n A 1 206 HIS 206 184 184 HIS HIS A . n A 1 207 SER 207 185 185 SER SER A . n A 1 208 ILE 208 186 186 ILE ILE A . n A 1 209 SER 209 187 187 SER SER A . n A 1 210 LEU 210 188 188 LEU LEU A . n A 1 211 PRO 211 189 189 PRO PRO A . n A 1 212 TYR 212 190 190 TYR TYR A . n A 1 213 ILE 213 191 191 ILE ILE A . n A 1 214 GLU 214 192 192 GLU GLU A . n A 1 215 LEU 215 193 193 LEU LEU A . n A 1 216 PHE 216 194 194 PHE PHE A . n A 1 217 ASN 217 195 195 ASN ASN A . n A 1 218 THR 218 196 196 THR THR A . n A 1 219 ARG 219 197 197 ARG ARG A . n A 1 220 SER 220 198 198 SER SER A . n A 1 221 ASN 221 199 199 ASN ASN A . n A 1 222 ASN 222 200 200 ASN ASN A . n A 1 223 PRO 223 201 201 PRO PRO A . n A 1 224 ILE 224 202 202 ILE ILE A . n A 1 225 VAL 225 203 203 VAL VAL A . n A 1 226 ILE 226 204 204 ILE ILE A . n A 1 227 PHE 227 205 205 PHE PHE A . n A 1 228 GLN 228 206 206 GLN GLN A . n A 1 229 GLN 229 207 207 GLN GLN A . n A 1 230 SER 230 208 208 SER SER A . n A 1 231 LEU 231 209 209 LEU LEU A . n A 1 232 LYS 232 210 210 LYS LYS A . n A 1 233 VAL 233 211 211 VAL VAL A . n A 1 234 LEU 234 212 212 LEU LEU A . n A 1 235 MET 235 213 213 MET MET A . n A 1 236 SER 236 214 214 SER SER A . n A 1 237 PHE 237 215 215 PHE PHE A . n A 1 238 ALA 238 216 216 ALA ALA A . n A 1 239 LEU 239 217 217 LEU LEU A . n A 1 240 LYS 240 218 218 LYS LYS A . n A 1 241 GLY 241 219 219 GLY GLY A . n A 1 242 SER 242 220 220 SER SER A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8AC 1 221 1 8AC 8AC A . C 3 GDP 1 222 1 GDP GDP A . D 4 MG 1 223 1 MG MG A . E 4 MG 1 224 2 MG MG A . F 5 PO4 1 225 1 PO4 PO4 A . G 6 EDO 1 226 1 EDO EDO A . H 6 EDO 1 227 3 EDO EDO A . I 6 EDO 1 228 4 EDO EDO A . J 6 EDO 1 229 6 EDO EDO A . K 6 EDO 1 230 7 EDO EDO A . L 6 EDO 1 231 8 EDO EDO A . M 7 GOL 1 232 1 GOL GOL A . N 8 HOH 1 233 233 HOH HOH A . N 8 HOH 2 234 234 HOH HOH A . N 8 HOH 3 235 235 HOH HOH A . N 8 HOH 4 236 236 HOH HOH A . N 8 HOH 5 237 237 HOH HOH A . N 8 HOH 6 238 238 HOH HOH A . N 8 HOH 7 239 239 HOH HOH A . N 8 HOH 8 240 240 HOH HOH A . N 8 HOH 9 241 241 HOH HOH A . N 8 HOH 10 242 242 HOH HOH A . N 8 HOH 11 243 243 HOH HOH A . N 8 HOH 12 244 244 HOH HOH A . N 8 HOH 13 245 245 HOH HOH A . N 8 HOH 14 246 246 HOH HOH A . N 8 HOH 15 247 247 HOH HOH A . N 8 HOH 16 248 248 HOH HOH A . N 8 HOH 17 249 249 HOH HOH A . N 8 HOH 18 250 250 HOH HOH A . N 8 HOH 19 251 251 HOH HOH A . N 8 HOH 20 252 252 HOH HOH A . N 8 HOH 21 253 253 HOH HOH A . N 8 HOH 22 254 254 HOH HOH A . N 8 HOH 23 255 255 HOH HOH A . N 8 HOH 24 256 256 HOH HOH A . N 8 HOH 25 257 257 HOH HOH A . N 8 HOH 26 258 258 HOH HOH A . N 8 HOH 27 259 259 HOH HOH A . N 8 HOH 28 260 260 HOH HOH A . N 8 HOH 29 261 261 HOH HOH A . N 8 HOH 30 262 262 HOH HOH A . N 8 HOH 31 263 263 HOH HOH A . N 8 HOH 32 264 264 HOH HOH A . N 8 HOH 33 265 265 HOH HOH A . N 8 HOH 34 266 266 HOH HOH A . N 8 HOH 35 267 267 HOH HOH A . N 8 HOH 36 268 268 HOH HOH A . N 8 HOH 37 269 269 HOH HOH A . N 8 HOH 38 270 270 HOH HOH A . N 8 HOH 39 271 271 HOH HOH A . N 8 HOH 40 272 272 HOH HOH A . N 8 HOH 41 273 273 HOH HOH A . N 8 HOH 42 274 274 HOH HOH A . N 8 HOH 43 275 275 HOH HOH A . N 8 HOH 44 276 1 HOH HOH A . N 8 HOH 45 277 277 HOH HOH A . N 8 HOH 46 278 278 HOH HOH A . N 8 HOH 47 279 279 HOH HOH A . N 8 HOH 48 280 280 HOH HOH A . N 8 HOH 49 281 281 HOH HOH A . N 8 HOH 50 282 282 HOH HOH A . N 8 HOH 51 283 283 HOH HOH A . N 8 HOH 52 284 284 HOH HOH A . N 8 HOH 53 285 285 HOH HOH A . N 8 HOH 54 286 286 HOH HOH A . N 8 HOH 55 287 287 HOH HOH A . N 8 HOH 56 288 288 HOH HOH A . N 8 HOH 57 289 289 HOH HOH A . N 8 HOH 58 290 290 HOH HOH A . N 8 HOH 59 291 291 HOH HOH A . N 8 HOH 60 292 292 HOH HOH A . N 8 HOH 61 293 293 HOH HOH A . N 8 HOH 62 294 294 HOH HOH A . N 8 HOH 63 295 295 HOH HOH A . N 8 HOH 64 296 296 HOH HOH A . N 8 HOH 65 297 297 HOH HOH A . N 8 HOH 66 298 298 HOH HOH A . N 8 HOH 67 299 299 HOH HOH A . N 8 HOH 68 300 300 HOH HOH A . N 8 HOH 69 301 301 HOH HOH A . N 8 HOH 70 302 302 HOH HOH A . N 8 HOH 71 303 303 HOH HOH A . N 8 HOH 72 304 304 HOH HOH A . N 8 HOH 73 305 305 HOH HOH A . N 8 HOH 74 306 306 HOH HOH A . N 8 HOH 75 307 307 HOH HOH A . N 8 HOH 76 308 308 HOH HOH A . N 8 HOH 77 309 309 HOH HOH A . N 8 HOH 78 310 310 HOH HOH A . N 8 HOH 79 311 311 HOH HOH A . N 8 HOH 80 312 312 HOH HOH A . N 8 HOH 81 313 2 HOH HOH A . N 8 HOH 82 314 314 HOH HOH A . N 8 HOH 83 315 315 HOH HOH A . N 8 HOH 84 316 316 HOH HOH A . N 8 HOH 85 317 3 HOH HOH A . N 8 HOH 86 318 318 HOH HOH A . N 8 HOH 87 319 319 HOH HOH A . N 8 HOH 88 320 320 HOH HOH A . N 8 HOH 89 321 321 HOH HOH A . N 8 HOH 90 322 4 HOH HOH A . N 8 HOH 91 323 5 HOH HOH A . N 8 HOH 92 324 324 HOH HOH A . N 8 HOH 93 325 325 HOH HOH A . N 8 HOH 94 326 326 HOH HOH A . N 8 HOH 95 327 327 HOH HOH A . N 8 HOH 96 328 6 HOH HOH A . N 8 HOH 97 329 329 HOH HOH A . N 8 HOH 98 330 330 HOH HOH A . N 8 HOH 99 331 331 HOH HOH A . N 8 HOH 100 332 332 HOH HOH A . N 8 HOH 101 333 333 HOH HOH A . N 8 HOH 102 334 334 HOH HOH A . N 8 HOH 103 335 335 HOH HOH A . N 8 HOH 104 336 336 HOH HOH A . N 8 HOH 105 337 337 HOH HOH A . N 8 HOH 106 338 338 HOH HOH A . N 8 HOH 107 339 339 HOH HOH A . N 8 HOH 108 340 340 HOH HOH A . N 8 HOH 109 341 7 HOH HOH A . N 8 HOH 110 342 342 HOH HOH A . N 8 HOH 111 343 343 HOH HOH A . N 8 HOH 112 344 344 HOH HOH A . N 8 HOH 113 345 345 HOH HOH A . N 8 HOH 114 346 346 HOH HOH A . N 8 HOH 115 347 347 HOH HOH A . N 8 HOH 116 348 8 HOH HOH A . N 8 HOH 117 349 9 HOH HOH A . N 8 HOH 118 350 10 HOH HOH A . N 8 HOH 119 351 11 HOH HOH A . N 8 HOH 120 352 12 HOH HOH A . N 8 HOH 121 353 13 HOH HOH A . N 8 HOH 122 354 14 HOH HOH A . N 8 HOH 123 355 15 HOH HOH A . N 8 HOH 124 356 16 HOH HOH A . N 8 HOH 125 357 17 HOH HOH A . N 8 HOH 126 358 18 HOH HOH A . N 8 HOH 127 359 19 HOH HOH A . N 8 HOH 128 360 20 HOH HOH A . N 8 HOH 129 361 21 HOH HOH A . N 8 HOH 130 362 22 HOH HOH A . N 8 HOH 131 363 23 HOH HOH A . N 8 HOH 132 364 24 HOH HOH A . N 8 HOH 133 365 25 HOH HOH A . N 8 HOH 134 366 26 HOH HOH A . N 8 HOH 135 367 27 HOH HOH A . N 8 HOH 136 368 28 HOH HOH A . N 8 HOH 137 369 29 HOH HOH A . N 8 HOH 138 370 30 HOH HOH A . N 8 HOH 139 371 31 HOH HOH A . N 8 HOH 140 372 32 HOH HOH A . N 8 HOH 141 373 33 HOH HOH A . N 8 HOH 142 374 34 HOH HOH A . N 8 HOH 143 375 35 HOH HOH A . N 8 HOH 144 376 36 HOH HOH A . N 8 HOH 145 377 37 HOH HOH A . N 8 HOH 146 378 38 HOH HOH A . N 8 HOH 147 379 39 HOH HOH A . N 8 HOH 148 380 40 HOH HOH A . N 8 HOH 149 381 41 HOH HOH A . N 8 HOH 150 382 42 HOH HOH A . N 8 HOH 151 383 43 HOH HOH A . N 8 HOH 152 384 44 HOH HOH A . N 8 HOH 153 385 45 HOH HOH A . N 8 HOH 154 386 46 HOH HOH A . N 8 HOH 155 387 48 HOH HOH A . N 8 HOH 156 388 49 HOH HOH A . N 8 HOH 157 389 50 HOH HOH A . N 8 HOH 158 390 51 HOH HOH A . N 8 HOH 159 391 52 HOH HOH A . N 8 HOH 160 392 53 HOH HOH A . N 8 HOH 161 393 54 HOH HOH A . N 8 HOH 162 394 55 HOH HOH A . N 8 HOH 163 395 56 HOH HOH A . N 8 HOH 164 396 57 HOH HOH A . N 8 HOH 165 397 58 HOH HOH A . N 8 HOH 166 398 59 HOH HOH A . N 8 HOH 167 399 60 HOH HOH A . N 8 HOH 168 400 61 HOH HOH A . N 8 HOH 169 401 62 HOH HOH A . N 8 HOH 170 402 63 HOH HOH A . N 8 HOH 171 403 64 HOH HOH A . N 8 HOH 172 404 65 HOH HOH A . N 8 HOH 173 405 66 HOH HOH A . N 8 HOH 174 406 67 HOH HOH A . N 8 HOH 175 407 68 HOH HOH A . N 8 HOH 176 408 69 HOH HOH A . N 8 HOH 177 409 70 HOH HOH A . N 8 HOH 178 410 71 HOH HOH A . N 8 HOH 179 411 72 HOH HOH A . N 8 HOH 180 412 73 HOH HOH A . N 8 HOH 181 413 74 HOH HOH A . N 8 HOH 182 414 75 HOH HOH A . N 8 HOH 183 415 76 HOH HOH A . N 8 HOH 184 416 77 HOH HOH A . N 8 HOH 185 417 78 HOH HOH A . N 8 HOH 186 418 79 HOH HOH A . N 8 HOH 187 419 80 HOH HOH A . N 8 HOH 188 420 81 HOH HOH A . N 8 HOH 189 421 82 HOH HOH A . N 8 HOH 190 422 83 HOH HOH A . N 8 HOH 191 423 84 HOH HOH A . N 8 HOH 192 424 85 HOH HOH A . N 8 HOH 193 425 86 HOH HOH A . N 8 HOH 194 426 87 HOH HOH A . N 8 HOH 195 427 88 HOH HOH A . N 8 HOH 196 428 89 HOH HOH A . N 8 HOH 197 429 90 HOH HOH A . N 8 HOH 198 430 91 HOH HOH A . N 8 HOH 199 431 92 HOH HOH A . N 8 HOH 200 432 93 HOH HOH A . N 8 HOH 201 433 94 HOH HOH A . N 8 HOH 202 434 95 HOH HOH A . N 8 HOH 203 435 96 HOH HOH A . N 8 HOH 204 436 97 HOH HOH A . N 8 HOH 205 437 98 HOH HOH A . N 8 HOH 206 438 99 HOH HOH A . N 8 HOH 207 439 100 HOH HOH A . N 8 HOH 208 440 101 HOH HOH A . N 8 HOH 209 441 102 HOH HOH A . N 8 HOH 210 442 103 HOH HOH A . N 8 HOH 211 443 104 HOH HOH A . N 8 HOH 212 444 105 HOH HOH A . N 8 HOH 213 445 106 HOH HOH A . N 8 HOH 214 446 107 HOH HOH A . N 8 HOH 215 447 108 HOH HOH A . N 8 HOH 216 448 109 HOH HOH A . N 8 HOH 217 449 110 HOH HOH A . N 8 HOH 218 450 111 HOH HOH A . N 8 HOH 219 451 112 HOH HOH A . N 8 HOH 220 452 113 HOH HOH A . N 8 HOH 221 453 114 HOH HOH A . N 8 HOH 222 454 115 HOH HOH A . N 8 HOH 223 455 116 HOH HOH A . N 8 HOH 224 456 117 HOH HOH A . N 8 HOH 225 457 118 HOH HOH A . N 8 HOH 226 458 119 HOH HOH A . N 8 HOH 227 459 120 HOH HOH A . N 8 HOH 228 460 121 HOH HOH A . N 8 HOH 229 461 122 HOH HOH A . N 8 HOH 230 462 123 HOH HOH A . N 8 HOH 231 463 124 HOH HOH A . N 8 HOH 232 464 125 HOH HOH A . N 8 HOH 233 465 126 HOH HOH A . N 8 HOH 234 466 127 HOH HOH A . N 8 HOH 235 467 128 HOH HOH A . N 8 HOH 236 468 129 HOH HOH A . N 8 HOH 237 469 130 HOH HOH A . N 8 HOH 238 470 131 HOH HOH A . N 8 HOH 239 471 132 HOH HOH A . N 8 HOH 240 472 133 HOH HOH A . N 8 HOH 241 473 134 HOH HOH A . N 8 HOH 242 474 135 HOH HOH A . N 8 HOH 243 475 136 HOH HOH A . N 8 HOH 244 476 137 HOH HOH A . N 8 HOH 245 477 138 HOH HOH A . N 8 HOH 246 478 139 HOH HOH A . N 8 HOH 247 479 140 HOH HOH A . N 8 HOH 248 480 141 HOH HOH A . N 8 HOH 249 481 142 HOH HOH A . N 8 HOH 250 482 143 HOH HOH A . N 8 HOH 251 483 144 HOH HOH A . N 8 HOH 252 484 145 HOH HOH A . N 8 HOH 253 485 146 HOH HOH A . N 8 HOH 254 486 147 HOH HOH A . N 8 HOH 255 487 148 HOH HOH A . N 8 HOH 256 488 149 HOH HOH A . N 8 HOH 257 489 150 HOH HOH A . N 8 HOH 258 490 151 HOH HOH A . N 8 HOH 259 491 152 HOH HOH A . N 8 HOH 260 492 153 HOH HOH A . N 8 HOH 261 493 154 HOH HOH A . N 8 HOH 262 494 155 HOH HOH A . N 8 HOH 263 495 156 HOH HOH A . N 8 HOH 264 496 157 HOH HOH A . N 8 HOH 265 497 158 HOH HOH A . N 8 HOH 266 498 159 HOH HOH A . N 8 HOH 267 499 160 HOH HOH A . N 8 HOH 268 500 161 HOH HOH A . N 8 HOH 269 501 162 HOH HOH A . N 8 HOH 270 502 163 HOH HOH A . N 8 HOH 271 503 164 HOH HOH A . N 8 HOH 272 504 165 HOH HOH A . N 8 HOH 273 505 166 HOH HOH A . N 8 HOH 274 506 167 HOH HOH A . N 8 HOH 275 507 168 HOH HOH A . N 8 HOH 276 508 169 HOH HOH A . N 8 HOH 277 509 170 HOH HOH A . N 8 HOH 278 510 171 HOH HOH A . N 8 HOH 279 511 172 HOH HOH A . N 8 HOH 280 512 173 HOH HOH A . N 8 HOH 281 513 174 HOH HOH A . N 8 HOH 282 514 175 HOH HOH A . N 8 HOH 283 515 176 HOH HOH A . N 8 HOH 284 516 177 HOH HOH A . N 8 HOH 285 517 178 HOH HOH A . N 8 HOH 286 518 179 HOH HOH A . N 8 HOH 287 519 180 HOH HOH A . N 8 HOH 288 520 181 HOH HOH A . N 8 HOH 289 521 182 HOH HOH A . N 8 HOH 290 522 183 HOH HOH A . N 8 HOH 291 523 184 HOH HOH A . N 8 HOH 292 524 185 HOH HOH A . N 8 HOH 293 525 186 HOH HOH A . N 8 HOH 294 526 187 HOH HOH A . N 8 HOH 295 527 188 HOH HOH A . N 8 HOH 296 528 189 HOH HOH A . N 8 HOH 297 529 190 HOH HOH A . N 8 HOH 298 530 191 HOH HOH A . N 8 HOH 299 531 192 HOH HOH A . N 8 HOH 300 532 193 HOH HOH A . N 8 HOH 301 533 194 HOH HOH A . N 8 HOH 302 534 195 HOH HOH A . N 8 HOH 303 535 196 HOH HOH A . N 8 HOH 304 536 197 HOH HOH A . N 8 HOH 305 537 198 HOH HOH A . N 8 HOH 306 538 199 HOH HOH A . N 8 HOH 307 539 200 HOH HOH A . N 8 HOH 308 540 201 HOH HOH A . N 8 HOH 309 541 202 HOH HOH A . N 8 HOH 310 542 203 HOH HOH A . N 8 HOH 311 543 204 HOH HOH A . N 8 HOH 312 544 205 HOH HOH A . N 8 HOH 313 545 206 HOH HOH A . N 8 HOH 314 546 207 HOH HOH A . N 8 HOH 315 547 208 HOH HOH A . N 8 HOH 316 548 209 HOH HOH A . N 8 HOH 317 549 210 HOH HOH A . N 8 HOH 318 550 211 HOH HOH A . N 8 HOH 319 551 212 HOH HOH A . N 8 HOH 320 552 213 HOH HOH A . N 8 HOH 321 553 214 HOH HOH A . N 8 HOH 322 554 215 HOH HOH A . N 8 HOH 323 555 218 HOH HOH A . N 8 HOH 324 556 219 HOH HOH A . N 8 HOH 325 557 220 HOH HOH A . N 8 HOH 326 558 221 HOH HOH A . N 8 HOH 327 559 222 HOH HOH A . N 8 HOH 328 560 223 HOH HOH A . N 8 HOH 329 561 224 HOH HOH A . N 8 HOH 330 562 227 HOH HOH A . N 8 HOH 331 563 229 HOH HOH A . N 8 HOH 332 564 230 HOH HOH A . N 8 HOH 333 565 231 HOH HOH A . N 8 HOH 334 566 232 HOH HOH A . N 8 HOH 335 567 1 HOH HOH A . N 8 HOH 336 568 2 HOH HOH A . N 8 HOH 337 569 3 HOH HOH A . N 8 HOH 338 570 4 HOH HOH A . N 8 HOH 339 571 5 HOH HOH A . N 8 HOH 340 572 1 HOH HOH A . N 8 HOH 341 573 3 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7460 ? 1 MORE -76 ? 1 'SSA (A^2)' 18640 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_554 -x,y,-z-1 -1.0000000000 0.0000000000 0.0000000000 13.4887366235 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -67.5045324797 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 380 ? N HOH . 2 1 A HOH 394 ? N HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 36 ? A THR 14 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 OD2 ? A ASP 72 ? A ASP 50 ? 1_555 80.6 ? 2 OG1 ? A THR 36 ? A THR 14 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 OE2 ? A GLU 138 ? A GLU 116 ? 1_555 84.6 ? 3 OD2 ? A ASP 72 ? A ASP 50 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 OE2 ? A GLU 138 ? A GLU 116 ? 1_555 89.5 ? 4 OG1 ? A THR 36 ? A THR 14 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O3B ? C GDP . ? A GDP 222 ? 1_555 89.9 ? 5 OD2 ? A ASP 72 ? A ASP 50 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O3B ? C GDP . ? A GDP 222 ? 1_555 165.2 ? 6 OE2 ? A GLU 138 ? A GLU 116 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O3B ? C GDP . ? A GDP 222 ? 1_555 101.0 ? 7 OG1 ? A THR 36 ? A THR 14 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O1 ? F PO4 . ? A PO4 225 ? 1_555 170.0 ? 8 OD2 ? A ASP 72 ? A ASP 50 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O1 ? F PO4 . ? A PO4 225 ? 1_555 94.8 ? 9 OE2 ? A GLU 138 ? A GLU 116 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O1 ? F PO4 . ? A PO4 225 ? 1_555 86.5 ? 10 O3B ? C GDP . ? A GDP 222 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O1 ? F PO4 . ? A PO4 225 ? 1_555 96.2 ? 11 OG1 ? A THR 36 ? A THR 14 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 93.1 ? 12 OD2 ? A ASP 72 ? A ASP 50 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 85.0 ? 13 OE2 ? A GLU 138 ? A GLU 116 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 174.4 ? 14 O3B ? C GDP . ? A GDP 222 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 84.1 ? 15 O1 ? F PO4 . ? A PO4 225 ? 1_555 MG ? E MG . ? A MG 224 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 95.3 ? 16 O1B ? C GDP . ? A GDP 222 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O3 ? F PO4 . ? A PO4 225 ? 1_555 104.1 ? 17 O1B ? C GDP . ? A GDP 222 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 269 ? 1_555 88.0 ? 18 O3 ? F PO4 . ? A PO4 225 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 269 ? 1_555 163.7 ? 19 O1B ? C GDP . ? A GDP 222 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 289 ? 1_555 168.1 ? 20 O3 ? F PO4 . ? A PO4 225 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 289 ? 1_555 85.1 ? 21 O ? N HOH . ? A HOH 269 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 289 ? 1_555 84.5 ? 22 O1B ? C GDP . ? A GDP 222 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 290 ? 1_555 93.1 ? 23 O3 ? F PO4 . ? A PO4 225 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 290 ? 1_555 88.8 ? 24 O ? N HOH . ? A HOH 269 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 290 ? 1_555 79.5 ? 25 O ? N HOH . ? A HOH 289 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 290 ? 1_555 94.6 ? 26 O1B ? C GDP . ? A GDP 222 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 86.1 ? 27 O3 ? F PO4 . ? A PO4 225 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 108.1 ? 28 O ? N HOH . ? A HOH 269 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 83.3 ? 29 O ? N HOH . ? A HOH 289 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 83.8 ? 30 O ? N HOH . ? A HOH 290 ? 1_555 MG ? D MG . ? A MG 223 ? 1_555 O ? N HOH . ? A HOH 517 ? 1_555 162.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-03-28 4 'Structure model' 1 3 2013-03-27 5 'Structure model' 1 4 2022-04-13 6 'Structure model' 1 5 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Structure summary' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' audit_author 2 5 'Structure model' citation_author 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_struct_conn_angle 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site 8 6 'Structure model' chem_comp_atom 9 6 'Structure model' chem_comp_bond 10 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_audit_author.identifier_ORCID' 2 5 'Structure model' '_citation_author.identifier_ORCID' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.value' 20 5 'Structure model' '_struct_conn.pdbx_dist_value' 21 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 5 'Structure model' '_struct_ref_seq_dif.details' 33 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 34 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 35 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 HKL-3000 phasing . ? 2 MOLREP phasing . ? 3 REFMAC refinement 5.5 ? 4 Coot 'model building' . ? 5 HKL-3000 'data reduction' . ? 6 HKL-3000 'data scaling' . ? 7 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 570 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 573 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 8 ? ? -170.84 -178.91 2 1 ASN A 179 ? ? 84.52 -1.02 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 101 ? CD ? A GLN 123 CD 2 1 Y 1 A GLN 101 ? OE1 ? A GLN 123 OE1 3 1 Y 1 A GLN 101 ? NE2 ? A GLN 123 NE2 4 1 Y 1 A GLU 128 ? CD ? A GLU 150 CD 5 1 Y 1 A GLU 128 ? OE1 ? A GLU 150 OE1 6 1 Y 1 A GLU 128 ? OE2 ? A GLU 150 OE2 7 1 Y 1 A GLN 167 ? CG ? A GLN 189 CG 8 1 Y 1 A GLN 167 ? CD ? A GLN 189 CD 9 1 Y 1 A GLN 167 ? OE1 ? A GLN 189 OE1 10 1 Y 1 A GLN 167 ? NE2 ? A GLN 189 NE2 11 1 Y 1 A ASN 179 ? CG ? A ASN 201 CG 12 1 Y 1 A ASN 179 ? OD1 ? A ASN 201 OD1 13 1 Y 1 A ASN 179 ? ND2 ? A ASN 201 ND2 14 1 Y 1 A LYS 210 ? CE ? A LYS 232 CE 15 1 Y 1 A LYS 210 ? NZ ? A LYS 232 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -21 ? A MET 1 2 1 Y 1 A GLY -20 ? A GLY 2 3 1 Y 1 A SER -19 ? A SER 3 4 1 Y 1 A SER -18 ? A SER 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A HIS -14 ? A HIS 8 9 1 Y 1 A HIS -13 ? A HIS 9 10 1 Y 1 A HIS -12 ? A HIS 10 11 1 Y 1 A SER -11 ? A SER 11 12 1 Y 1 A SER -10 ? A SER 12 13 1 Y 1 A GLY -9 ? A GLY 13 14 1 Y 1 A ARG -8 ? A ARG 14 15 1 Y 1 A GLU -7 ? A GLU 15 16 1 Y 1 A ASN -6 ? A ASN 16 17 1 Y 1 A LEU -5 ? A LEU 17 18 1 Y 1 A TYR -4 ? A TYR 18 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8AC NAA N N N 1 8AC OAB O N N 2 8AC OAC O N N 3 8AC CAD C N N 4 8AC CAE C N N 5 8AC CAF C N N 6 8AC CAG C N N 7 8AC CAH C N N 8 8AC CAI C N N 9 8AC CAJ C N N 10 8AC CAK C N N 11 8AC HNAA H N N 12 8AC HNAB H N N 13 8AC HOAC H N N 14 8AC HAD H N N 15 8AC HADA H N N 16 8AC HAE H N N 17 8AC HAEA H N N 18 8AC HAF H N N 19 8AC HAFA H N N 20 8AC HAG H N N 21 8AC HAGA H N N 22 8AC HAH H N N 23 8AC HAHA H N N 24 8AC HAI H N N 25 8AC HAIA H N N 26 8AC HAJ H N N 27 8AC HAJA H N N 28 ALA N N N N 29 ALA CA C N S 30 ALA C C N N 31 ALA O O N N 32 ALA CB C N N 33 ALA OXT O N N 34 ALA H H N N 35 ALA H2 H N N 36 ALA HA H N N 37 ALA HB1 H N N 38 ALA HB2 H N N 39 ALA HB3 H N N 40 ALA HXT H N N 41 ARG N N N N 42 ARG CA C N S 43 ARG C C N N 44 ARG O O N N 45 ARG CB C N N 46 ARG CG C N N 47 ARG CD C N N 48 ARG NE N N N 49 ARG CZ C N N 50 ARG NH1 N N N 51 ARG NH2 N N N 52 ARG OXT O N N 53 ARG H H N N 54 ARG H2 H N N 55 ARG HA H N N 56 ARG HB2 H N N 57 ARG HB3 H N N 58 ARG HG2 H N N 59 ARG HG3 H N N 60 ARG HD2 H N N 61 ARG HD3 H N N 62 ARG HE H N N 63 ARG HH11 H N N 64 ARG HH12 H N N 65 ARG HH21 H N N 66 ARG HH22 H N N 67 ARG HXT H N N 68 ASN N N N N 69 ASN CA C N S 70 ASN C C N N 71 ASN O O N N 72 ASN CB C N N 73 ASN CG C N N 74 ASN OD1 O N N 75 ASN ND2 N N N 76 ASN OXT O N N 77 ASN H H N N 78 ASN H2 H N N 79 ASN HA H N N 80 ASN HB2 H N N 81 ASN HB3 H N N 82 ASN HD21 H N N 83 ASN HD22 H N N 84 ASN HXT H N N 85 ASP N N N N 86 ASP CA C N S 87 ASP C C N N 88 ASP O O N N 89 ASP CB C N N 90 ASP CG C N N 91 ASP OD1 O N N 92 ASP OD2 O N N 93 ASP OXT O N N 94 ASP H H N N 95 ASP H2 H N N 96 ASP HA H N N 97 ASP HB2 H N N 98 ASP HB3 H N N 99 ASP HD2 H N N 100 ASP HXT H N N 101 CYS N N N N 102 CYS CA C N R 103 CYS C C N N 104 CYS O O N N 105 CYS CB C N N 106 CYS SG S N N 107 CYS OXT O N N 108 CYS H H N N 109 CYS H2 H N N 110 CYS HA H N N 111 CYS HB2 H N N 112 CYS HB3 H N N 113 CYS HG H N N 114 CYS HXT H N N 115 EDO C1 C N N 116 EDO O1 O N N 117 EDO C2 C N N 118 EDO O2 O N N 119 EDO H11 H N N 120 EDO H12 H N N 121 EDO HO1 H N N 122 EDO H21 H N N 123 EDO H22 H N N 124 EDO HO2 H N N 125 GDP PB P N N 126 GDP O1B O N N 127 GDP O2B O N N 128 GDP O3B O N N 129 GDP O3A O N N 130 GDP PA P N N 131 GDP O1A O N N 132 GDP O2A O N N 133 GDP "O5'" O N N 134 GDP "C5'" C N N 135 GDP "C4'" C N R 136 GDP "O4'" O N N 137 GDP "C3'" C N S 138 GDP "O3'" O N N 139 GDP "C2'" C N R 140 GDP "O2'" O N N 141 GDP "C1'" C N R 142 GDP N9 N Y N 143 GDP C8 C Y N 144 GDP N7 N Y N 145 GDP C5 C Y N 146 GDP C6 C N N 147 GDP O6 O N N 148 GDP N1 N N N 149 GDP C2 C N N 150 GDP N2 N N N 151 GDP N3 N N N 152 GDP C4 C Y N 153 GDP HOB2 H N N 154 GDP HOB3 H N N 155 GDP HOA2 H N N 156 GDP "H5'" H N N 157 GDP "H5''" H N N 158 GDP "H4'" H N N 159 GDP "H3'" H N N 160 GDP "HO3'" H N N 161 GDP "H2'" H N N 162 GDP "HO2'" H N N 163 GDP "H1'" H N N 164 GDP H8 H N N 165 GDP HN1 H N N 166 GDP HN21 H N N 167 GDP HN22 H N N 168 GLN N N N N 169 GLN CA C N S 170 GLN C C N N 171 GLN O O N N 172 GLN CB C N N 173 GLN CG C N N 174 GLN CD C N N 175 GLN OE1 O N N 176 GLN NE2 N N N 177 GLN OXT O N N 178 GLN H H N N 179 GLN H2 H N N 180 GLN HA H N N 181 GLN HB2 H N N 182 GLN HB3 H N N 183 GLN HG2 H N N 184 GLN HG3 H N N 185 GLN HE21 H N N 186 GLN HE22 H N N 187 GLN HXT H N N 188 GLU N N N N 189 GLU CA C N S 190 GLU C C N N 191 GLU O O N N 192 GLU CB C N N 193 GLU CG C N N 194 GLU CD C N N 195 GLU OE1 O N N 196 GLU OE2 O N N 197 GLU OXT O N N 198 GLU H H N N 199 GLU H2 H N N 200 GLU HA H N N 201 GLU HB2 H N N 202 GLU HB3 H N N 203 GLU HG2 H N N 204 GLU HG3 H N N 205 GLU HE2 H N N 206 GLU HXT H N N 207 GLY N N N N 208 GLY CA C N N 209 GLY C C N N 210 GLY O O N N 211 GLY OXT O N N 212 GLY H H N N 213 GLY H2 H N N 214 GLY HA2 H N N 215 GLY HA3 H N N 216 GLY HXT H N N 217 GOL C1 C N N 218 GOL O1 O N N 219 GOL C2 C N N 220 GOL O2 O N N 221 GOL C3 C N N 222 GOL O3 O N N 223 GOL H11 H N N 224 GOL H12 H N N 225 GOL HO1 H N N 226 GOL H2 H N N 227 GOL HO2 H N N 228 GOL H31 H N N 229 GOL H32 H N N 230 GOL HO3 H N N 231 HIS N N N N 232 HIS CA C N S 233 HIS C C N N 234 HIS O O N N 235 HIS CB C N N 236 HIS CG C Y N 237 HIS ND1 N Y N 238 HIS CD2 C Y N 239 HIS CE1 C Y N 240 HIS NE2 N Y N 241 HIS OXT O N N 242 HIS H H N N 243 HIS H2 H N N 244 HIS HA H N N 245 HIS HB2 H N N 246 HIS HB3 H N N 247 HIS HD1 H N N 248 HIS HD2 H N N 249 HIS HE1 H N N 250 HIS HE2 H N N 251 HIS HXT H N N 252 HOH O O N N 253 HOH H1 H N N 254 HOH H2 H N N 255 ILE N N N N 256 ILE CA C N S 257 ILE C C N N 258 ILE O O N N 259 ILE CB C N S 260 ILE CG1 C N N 261 ILE CG2 C N N 262 ILE CD1 C N N 263 ILE OXT O N N 264 ILE H H N N 265 ILE H2 H N N 266 ILE HA H N N 267 ILE HB H N N 268 ILE HG12 H N N 269 ILE HG13 H N N 270 ILE HG21 H N N 271 ILE HG22 H N N 272 ILE HG23 H N N 273 ILE HD11 H N N 274 ILE HD12 H N N 275 ILE HD13 H N N 276 ILE HXT H N N 277 LEU N N N N 278 LEU CA C N S 279 LEU C C N N 280 LEU O O N N 281 LEU CB C N N 282 LEU CG C N N 283 LEU CD1 C N N 284 LEU CD2 C N N 285 LEU OXT O N N 286 LEU H H N N 287 LEU H2 H N N 288 LEU HA H N N 289 LEU HB2 H N N 290 LEU HB3 H N N 291 LEU HG H N N 292 LEU HD11 H N N 293 LEU HD12 H N N 294 LEU HD13 H N N 295 LEU HD21 H N N 296 LEU HD22 H N N 297 LEU HD23 H N N 298 LEU HXT H N N 299 LYS N N N N 300 LYS CA C N S 301 LYS C C N N 302 LYS O O N N 303 LYS CB C N N 304 LYS CG C N N 305 LYS CD C N N 306 LYS CE C N N 307 LYS NZ N N N 308 LYS OXT O N N 309 LYS H H N N 310 LYS H2 H N N 311 LYS HA H N N 312 LYS HB2 H N N 313 LYS HB3 H N N 314 LYS HG2 H N N 315 LYS HG3 H N N 316 LYS HD2 H N N 317 LYS HD3 H N N 318 LYS HE2 H N N 319 LYS HE3 H N N 320 LYS HZ1 H N N 321 LYS HZ2 H N N 322 LYS HZ3 H N N 323 LYS HXT H N N 324 MET N N N N 325 MET CA C N S 326 MET C C N N 327 MET O O N N 328 MET CB C N N 329 MET CG C N N 330 MET SD S N N 331 MET CE C N N 332 MET OXT O N N 333 MET H H N N 334 MET H2 H N N 335 MET HA H N N 336 MET HB2 H N N 337 MET HB3 H N N 338 MET HG2 H N N 339 MET HG3 H N N 340 MET HE1 H N N 341 MET HE2 H N N 342 MET HE3 H N N 343 MET HXT H N N 344 MG MG MG N N 345 PHE N N N N 346 PHE CA C N S 347 PHE C C N N 348 PHE O O N N 349 PHE CB C N N 350 PHE CG C Y N 351 PHE CD1 C Y N 352 PHE CD2 C Y N 353 PHE CE1 C Y N 354 PHE CE2 C Y N 355 PHE CZ C Y N 356 PHE OXT O N N 357 PHE H H N N 358 PHE H2 H N N 359 PHE HA H N N 360 PHE HB2 H N N 361 PHE HB3 H N N 362 PHE HD1 H N N 363 PHE HD2 H N N 364 PHE HE1 H N N 365 PHE HE2 H N N 366 PHE HZ H N N 367 PHE HXT H N N 368 PO4 P P N N 369 PO4 O1 O N N 370 PO4 O2 O N N 371 PO4 O3 O N N 372 PO4 O4 O N N 373 PRO N N N N 374 PRO CA C N S 375 PRO C C N N 376 PRO O O N N 377 PRO CB C N N 378 PRO CG C N N 379 PRO CD C N N 380 PRO OXT O N N 381 PRO H H N N 382 PRO HA H N N 383 PRO HB2 H N N 384 PRO HB3 H N N 385 PRO HG2 H N N 386 PRO HG3 H N N 387 PRO HD2 H N N 388 PRO HD3 H N N 389 PRO HXT H N N 390 SER N N N N 391 SER CA C N S 392 SER C C N N 393 SER O O N N 394 SER CB C N N 395 SER OG O N N 396 SER OXT O N N 397 SER H H N N 398 SER H2 H N N 399 SER HA H N N 400 SER HB2 H N N 401 SER HB3 H N N 402 SER HG H N N 403 SER HXT H N N 404 THR N N N N 405 THR CA C N S 406 THR C C N N 407 THR O O N N 408 THR CB C N R 409 THR OG1 O N N 410 THR CG2 C N N 411 THR OXT O N N 412 THR H H N N 413 THR H2 H N N 414 THR HA H N N 415 THR HB H N N 416 THR HG1 H N N 417 THR HG21 H N N 418 THR HG22 H N N 419 THR HG23 H N N 420 THR HXT H N N 421 TYR N N N N 422 TYR CA C N S 423 TYR C C N N 424 TYR O O N N 425 TYR CB C N N 426 TYR CG C Y N 427 TYR CD1 C Y N 428 TYR CD2 C Y N 429 TYR CE1 C Y N 430 TYR CE2 C Y N 431 TYR CZ C Y N 432 TYR OH O N N 433 TYR OXT O N N 434 TYR H H N N 435 TYR H2 H N N 436 TYR HA H N N 437 TYR HB2 H N N 438 TYR HB3 H N N 439 TYR HD1 H N N 440 TYR HD2 H N N 441 TYR HE1 H N N 442 TYR HE2 H N N 443 TYR HH H N N 444 TYR HXT H N N 445 VAL N N N N 446 VAL CA C N S 447 VAL C C N N 448 VAL O O N N 449 VAL CB C N N 450 VAL CG1 C N N 451 VAL CG2 C N N 452 VAL OXT O N N 453 VAL H H N N 454 VAL H2 H N N 455 VAL HA H N N 456 VAL HB H N N 457 VAL HG11 H N N 458 VAL HG12 H N N 459 VAL HG13 H N N 460 VAL HG21 H N N 461 VAL HG22 H N N 462 VAL HG23 H N N 463 VAL HXT H N N 464 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8AC CAD NAA sing N N 1 8AC NAA HNAA sing N N 2 8AC NAA HNAB sing N N 3 8AC OAB CAK doub N N 4 8AC CAK OAC sing N N 5 8AC OAC HOAC sing N N 6 8AC CAE CAD sing N N 7 8AC CAD HAD sing N N 8 8AC CAD HADA sing N N 9 8AC CAE CAF sing N N 10 8AC CAE HAE sing N N 11 8AC CAE HAEA sing N N 12 8AC CAF CAG sing N N 13 8AC CAF HAF sing N N 14 8AC CAF HAFA sing N N 15 8AC CAH CAG sing N N 16 8AC CAG HAG sing N N 17 8AC CAG HAGA sing N N 18 8AC CAH CAI sing N N 19 8AC CAH HAH sing N N 20 8AC CAH HAHA sing N N 21 8AC CAJ CAI sing N N 22 8AC CAI HAI sing N N 23 8AC CAI HAIA sing N N 24 8AC CAK CAJ sing N N 25 8AC CAJ HAJ sing N N 26 8AC CAJ HAJA sing N N 27 ALA N CA sing N N 28 ALA N H sing N N 29 ALA N H2 sing N N 30 ALA CA C sing N N 31 ALA CA CB sing N N 32 ALA CA HA sing N N 33 ALA C O doub N N 34 ALA C OXT sing N N 35 ALA CB HB1 sing N N 36 ALA CB HB2 sing N N 37 ALA CB HB3 sing N N 38 ALA OXT HXT sing N N 39 ARG N CA sing N N 40 ARG N H sing N N 41 ARG N H2 sing N N 42 ARG CA C sing N N 43 ARG CA CB sing N N 44 ARG CA HA sing N N 45 ARG C O doub N N 46 ARG C OXT sing N N 47 ARG CB CG sing N N 48 ARG CB HB2 sing N N 49 ARG CB HB3 sing N N 50 ARG CG CD sing N N 51 ARG CG HG2 sing N N 52 ARG CG HG3 sing N N 53 ARG CD NE sing N N 54 ARG CD HD2 sing N N 55 ARG CD HD3 sing N N 56 ARG NE CZ sing N N 57 ARG NE HE sing N N 58 ARG CZ NH1 sing N N 59 ARG CZ NH2 doub N N 60 ARG NH1 HH11 sing N N 61 ARG NH1 HH12 sing N N 62 ARG NH2 HH21 sing N N 63 ARG NH2 HH22 sing N N 64 ARG OXT HXT sing N N 65 ASN N CA sing N N 66 ASN N H sing N N 67 ASN N H2 sing N N 68 ASN CA C sing N N 69 ASN CA CB sing N N 70 ASN CA HA sing N N 71 ASN C O doub N N 72 ASN C OXT sing N N 73 ASN CB CG sing N N 74 ASN CB HB2 sing N N 75 ASN CB HB3 sing N N 76 ASN CG OD1 doub N N 77 ASN CG ND2 sing N N 78 ASN ND2 HD21 sing N N 79 ASN ND2 HD22 sing N N 80 ASN OXT HXT sing N N 81 ASP N CA sing N N 82 ASP N H sing N N 83 ASP N H2 sing N N 84 ASP CA C sing N N 85 ASP CA CB sing N N 86 ASP CA HA sing N N 87 ASP C O doub N N 88 ASP C OXT sing N N 89 ASP CB CG sing N N 90 ASP CB HB2 sing N N 91 ASP CB HB3 sing N N 92 ASP CG OD1 doub N N 93 ASP CG OD2 sing N N 94 ASP OD2 HD2 sing N N 95 ASP OXT HXT sing N N 96 CYS N CA sing N N 97 CYS N H sing N N 98 CYS N H2 sing N N 99 CYS CA C sing N N 100 CYS CA CB sing N N 101 CYS CA HA sing N N 102 CYS C O doub N N 103 CYS C OXT sing N N 104 CYS CB SG sing N N 105 CYS CB HB2 sing N N 106 CYS CB HB3 sing N N 107 CYS SG HG sing N N 108 CYS OXT HXT sing N N 109 EDO C1 O1 sing N N 110 EDO C1 C2 sing N N 111 EDO C1 H11 sing N N 112 EDO C1 H12 sing N N 113 EDO O1 HO1 sing N N 114 EDO C2 O2 sing N N 115 EDO C2 H21 sing N N 116 EDO C2 H22 sing N N 117 EDO O2 HO2 sing N N 118 GDP PB O1B doub N N 119 GDP PB O2B sing N N 120 GDP PB O3B sing N N 121 GDP PB O3A sing N N 122 GDP O2B HOB2 sing N N 123 GDP O3B HOB3 sing N N 124 GDP O3A PA sing N N 125 GDP PA O1A doub N N 126 GDP PA O2A sing N N 127 GDP PA "O5'" sing N N 128 GDP O2A HOA2 sing N N 129 GDP "O5'" "C5'" sing N N 130 GDP "C5'" "C4'" sing N N 131 GDP "C5'" "H5'" sing N N 132 GDP "C5'" "H5''" sing N N 133 GDP "C4'" "O4'" sing N N 134 GDP "C4'" "C3'" sing N N 135 GDP "C4'" "H4'" sing N N 136 GDP "O4'" "C1'" sing N N 137 GDP "C3'" "O3'" sing N N 138 GDP "C3'" "C2'" sing N N 139 GDP "C3'" "H3'" sing N N 140 GDP "O3'" "HO3'" sing N N 141 GDP "C2'" "O2'" sing N N 142 GDP "C2'" "C1'" sing N N 143 GDP "C2'" "H2'" sing N N 144 GDP "O2'" "HO2'" sing N N 145 GDP "C1'" N9 sing N N 146 GDP "C1'" "H1'" sing N N 147 GDP N9 C8 sing Y N 148 GDP N9 C4 sing Y N 149 GDP C8 N7 doub Y N 150 GDP C8 H8 sing N N 151 GDP N7 C5 sing Y N 152 GDP C5 C6 sing N N 153 GDP C5 C4 doub Y N 154 GDP C6 O6 doub N N 155 GDP C6 N1 sing N N 156 GDP N1 C2 sing N N 157 GDP N1 HN1 sing N N 158 GDP C2 N2 sing N N 159 GDP C2 N3 doub N N 160 GDP N2 HN21 sing N N 161 GDP N2 HN22 sing N N 162 GDP N3 C4 sing N N 163 GLN N CA sing N N 164 GLN N H sing N N 165 GLN N H2 sing N N 166 GLN CA C sing N N 167 GLN CA CB sing N N 168 GLN CA HA sing N N 169 GLN C O doub N N 170 GLN C OXT sing N N 171 GLN CB CG sing N N 172 GLN CB HB2 sing N N 173 GLN CB HB3 sing N N 174 GLN CG CD sing N N 175 GLN CG HG2 sing N N 176 GLN CG HG3 sing N N 177 GLN CD OE1 doub N N 178 GLN CD NE2 sing N N 179 GLN NE2 HE21 sing N N 180 GLN NE2 HE22 sing N N 181 GLN OXT HXT sing N N 182 GLU N CA sing N N 183 GLU N H sing N N 184 GLU N H2 sing N N 185 GLU CA C sing N N 186 GLU CA CB sing N N 187 GLU CA HA sing N N 188 GLU C O doub N N 189 GLU C OXT sing N N 190 GLU CB CG sing N N 191 GLU CB HB2 sing N N 192 GLU CB HB3 sing N N 193 GLU CG CD sing N N 194 GLU CG HG2 sing N N 195 GLU CG HG3 sing N N 196 GLU CD OE1 doub N N 197 GLU CD OE2 sing N N 198 GLU OE2 HE2 sing N N 199 GLU OXT HXT sing N N 200 GLY N CA sing N N 201 GLY N H sing N N 202 GLY N H2 sing N N 203 GLY CA C sing N N 204 GLY CA HA2 sing N N 205 GLY CA HA3 sing N N 206 GLY C O doub N N 207 GLY C OXT sing N N 208 GLY OXT HXT sing N N 209 GOL C1 O1 sing N N 210 GOL C1 C2 sing N N 211 GOL C1 H11 sing N N 212 GOL C1 H12 sing N N 213 GOL O1 HO1 sing N N 214 GOL C2 O2 sing N N 215 GOL C2 C3 sing N N 216 GOL C2 H2 sing N N 217 GOL O2 HO2 sing N N 218 GOL C3 O3 sing N N 219 GOL C3 H31 sing N N 220 GOL C3 H32 sing N N 221 GOL O3 HO3 sing N N 222 HIS N CA sing N N 223 HIS N H sing N N 224 HIS N H2 sing N N 225 HIS CA C sing N N 226 HIS CA CB sing N N 227 HIS CA HA sing N N 228 HIS C O doub N N 229 HIS C OXT sing N N 230 HIS CB CG sing N N 231 HIS CB HB2 sing N N 232 HIS CB HB3 sing N N 233 HIS CG ND1 sing Y N 234 HIS CG CD2 doub Y N 235 HIS ND1 CE1 doub Y N 236 HIS ND1 HD1 sing N N 237 HIS CD2 NE2 sing Y N 238 HIS CD2 HD2 sing N N 239 HIS CE1 NE2 sing Y N 240 HIS CE1 HE1 sing N N 241 HIS NE2 HE2 sing N N 242 HIS OXT HXT sing N N 243 HOH O H1 sing N N 244 HOH O H2 sing N N 245 ILE N CA sing N N 246 ILE N H sing N N 247 ILE N H2 sing N N 248 ILE CA C sing N N 249 ILE CA CB sing N N 250 ILE CA HA sing N N 251 ILE C O doub N N 252 ILE C OXT sing N N 253 ILE CB CG1 sing N N 254 ILE CB CG2 sing N N 255 ILE CB HB sing N N 256 ILE CG1 CD1 sing N N 257 ILE CG1 HG12 sing N N 258 ILE CG1 HG13 sing N N 259 ILE CG2 HG21 sing N N 260 ILE CG2 HG22 sing N N 261 ILE CG2 HG23 sing N N 262 ILE CD1 HD11 sing N N 263 ILE CD1 HD12 sing N N 264 ILE CD1 HD13 sing N N 265 ILE OXT HXT sing N N 266 LEU N CA sing N N 267 LEU N H sing N N 268 LEU N H2 sing N N 269 LEU CA C sing N N 270 LEU CA CB sing N N 271 LEU CA HA sing N N 272 LEU C O doub N N 273 LEU C OXT sing N N 274 LEU CB CG sing N N 275 LEU CB HB2 sing N N 276 LEU CB HB3 sing N N 277 LEU CG CD1 sing N N 278 LEU CG CD2 sing N N 279 LEU CG HG sing N N 280 LEU CD1 HD11 sing N N 281 LEU CD1 HD12 sing N N 282 LEU CD1 HD13 sing N N 283 LEU CD2 HD21 sing N N 284 LEU CD2 HD22 sing N N 285 LEU CD2 HD23 sing N N 286 LEU OXT HXT sing N N 287 LYS N CA sing N N 288 LYS N H sing N N 289 LYS N H2 sing N N 290 LYS CA C sing N N 291 LYS CA CB sing N N 292 LYS CA HA sing N N 293 LYS C O doub N N 294 LYS C OXT sing N N 295 LYS CB CG sing N N 296 LYS CB HB2 sing N N 297 LYS CB HB3 sing N N 298 LYS CG CD sing N N 299 LYS CG HG2 sing N N 300 LYS CG HG3 sing N N 301 LYS CD CE sing N N 302 LYS CD HD2 sing N N 303 LYS CD HD3 sing N N 304 LYS CE NZ sing N N 305 LYS CE HE2 sing N N 306 LYS CE HE3 sing N N 307 LYS NZ HZ1 sing N N 308 LYS NZ HZ2 sing N N 309 LYS NZ HZ3 sing N N 310 LYS OXT HXT sing N N 311 MET N CA sing N N 312 MET N H sing N N 313 MET N H2 sing N N 314 MET CA C sing N N 315 MET CA CB sing N N 316 MET CA HA sing N N 317 MET C O doub N N 318 MET C OXT sing N N 319 MET CB CG sing N N 320 MET CB HB2 sing N N 321 MET CB HB3 sing N N 322 MET CG SD sing N N 323 MET CG HG2 sing N N 324 MET CG HG3 sing N N 325 MET SD CE sing N N 326 MET CE HE1 sing N N 327 MET CE HE2 sing N N 328 MET CE HE3 sing N N 329 MET OXT HXT sing N N 330 PHE N CA sing N N 331 PHE N H sing N N 332 PHE N H2 sing N N 333 PHE CA C sing N N 334 PHE CA CB sing N N 335 PHE CA HA sing N N 336 PHE C O doub N N 337 PHE C OXT sing N N 338 PHE CB CG sing N N 339 PHE CB HB2 sing N N 340 PHE CB HB3 sing N N 341 PHE CG CD1 doub Y N 342 PHE CG CD2 sing Y N 343 PHE CD1 CE1 sing Y N 344 PHE CD1 HD1 sing N N 345 PHE CD2 CE2 doub Y N 346 PHE CD2 HD2 sing N N 347 PHE CE1 CZ doub Y N 348 PHE CE1 HE1 sing N N 349 PHE CE2 CZ sing Y N 350 PHE CE2 HE2 sing N N 351 PHE CZ HZ sing N N 352 PHE OXT HXT sing N N 353 PO4 P O1 doub N N 354 PO4 P O2 sing N N 355 PO4 P O3 sing N N 356 PO4 P O4 sing N N 357 PRO N CA sing N N 358 PRO N CD sing N N 359 PRO N H sing N N 360 PRO CA C sing N N 361 PRO CA CB sing N N 362 PRO CA HA sing N N 363 PRO C O doub N N 364 PRO C OXT sing N N 365 PRO CB CG sing N N 366 PRO CB HB2 sing N N 367 PRO CB HB3 sing N N 368 PRO CG CD sing N N 369 PRO CG HG2 sing N N 370 PRO CG HG3 sing N N 371 PRO CD HD2 sing N N 372 PRO CD HD3 sing N N 373 PRO OXT HXT sing N N 374 SER N CA sing N N 375 SER N H sing N N 376 SER N H2 sing N N 377 SER CA C sing N N 378 SER CA CB sing N N 379 SER CA HA sing N N 380 SER C O doub N N 381 SER C OXT sing N N 382 SER CB OG sing N N 383 SER CB HB2 sing N N 384 SER CB HB3 sing N N 385 SER OG HG sing N N 386 SER OXT HXT sing N N 387 THR N CA sing N N 388 THR N H sing N N 389 THR N H2 sing N N 390 THR CA C sing N N 391 THR CA CB sing N N 392 THR CA HA sing N N 393 THR C O doub N N 394 THR C OXT sing N N 395 THR CB OG1 sing N N 396 THR CB CG2 sing N N 397 THR CB HB sing N N 398 THR OG1 HG1 sing N N 399 THR CG2 HG21 sing N N 400 THR CG2 HG22 sing N N 401 THR CG2 HG23 sing N N 402 THR OXT HXT sing N N 403 TYR N CA sing N N 404 TYR N H sing N N 405 TYR N H2 sing N N 406 TYR CA C sing N N 407 TYR CA CB sing N N 408 TYR CA HA sing N N 409 TYR C O doub N N 410 TYR C OXT sing N N 411 TYR CB CG sing N N 412 TYR CB HB2 sing N N 413 TYR CB HB3 sing N N 414 TYR CG CD1 doub Y N 415 TYR CG CD2 sing Y N 416 TYR CD1 CE1 sing Y N 417 TYR CD1 HD1 sing N N 418 TYR CD2 CE2 doub Y N 419 TYR CD2 HD2 sing N N 420 TYR CE1 CZ doub Y N 421 TYR CE1 HE1 sing N N 422 TYR CE2 CZ sing Y N 423 TYR CE2 HE2 sing N N 424 TYR CZ OH sing N N 425 TYR OH HH sing N N 426 TYR OXT HXT sing N N 427 VAL N CA sing N N 428 VAL N H sing N N 429 VAL N H2 sing N N 430 VAL CA C sing N N 431 VAL CA CB sing N N 432 VAL CA HA sing N N 433 VAL C O doub N N 434 VAL C OXT sing N N 435 VAL CB CG1 sing N N 436 VAL CB CG2 sing N N 437 VAL CB HB sing N N 438 VAL CG1 HG11 sing N N 439 VAL CG1 HG12 sing N N 440 VAL CG1 HG13 sing N N 441 VAL CG2 HG21 sing N N 442 VAL CG2 HG22 sing N N 443 VAL CG2 HG23 sing N N 444 VAL OXT HXT sing N N 445 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '8-aminooctanoic acid' 8AC 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 'MAGNESIUM ION' MG 5 'PHOSPHATE ION' PO4 6 1,2-ETHANEDIOL EDO 7 GLYCEROL GOL 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2QMO _pdbx_initial_refinement_model.details 'PDB entry 2QMO' #